BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3131
Length=332
Score E
Sequences producing significant alignments: (Bits) Value
gi|15842704|ref|NP_337741.1| hypothetical protein MT3217 [Mycoba... 665 0.0
gi|31794307|ref|NP_856800.1| hypothetical protein Mb3155 [Mycoba... 664 0.0
gi|289571341|ref|ZP_06451568.1| conserved hypothetical protein [... 525 5e-147
gi|183981533|ref|YP_001849824.1| hypothetical protein MMAR_1518 ... 506 1e-141
gi|240168622|ref|ZP_04747281.1| hypothetical protein MkanA1_0487... 502 4e-140
gi|118617912|ref|YP_906244.1| hypothetical protein MUL_2421 [Myc... 501 9e-140
gi|240171846|ref|ZP_04750505.1| hypothetical protein MkanA1_2120... 453 2e-125
gi|183983485|ref|YP_001851776.1| hypothetical protein MMAR_3502 ... 437 9e-121
gi|296169061|ref|ZP_06850721.1| conserved hypothetical protein [... 434 9e-120
gi|336457360|gb|EGO36371.1| nitroreductase family protein [Mycob... 426 4e-117
gi|118463529|ref|YP_881694.1| hypothetical protein MAV_2502 [Myc... 424 1e-116
gi|254775159|ref|ZP_05216675.1| hypothetical protein MaviaA2_108... 423 2e-116
gi|41407844|ref|NP_960680.1| hypothetical protein MAP1746c [Myco... 422 3e-116
gi|333991620|ref|YP_004524234.1| hypothetical protein JDM601_298... 419 3e-115
gi|120403535|ref|YP_953364.1| hypothetical protein Mvan_2547 [My... 416 3e-114
gi|41409371|ref|NP_962207.1| hypothetical protein MAP3273c [Myco... 415 4e-114
gi|342861120|ref|ZP_08717769.1| hypothetical protein MCOL_19652 ... 412 5e-113
gi|118463329|ref|YP_883260.1| hypothetical protein MAV_4111 [Myc... 410 2e-112
gi|118471183|ref|YP_888244.1| hypothetical protein MSMEG_3955 [M... 406 2e-111
gi|254822202|ref|ZP_05227203.1| hypothetical protein MintA_19874... 400 2e-109
gi|108798051|ref|YP_638248.1| hypothetical protein Mmcs_1078 [My... 385 5e-105
gi|315444763|ref|YP_004077642.1| nitroreductase family protein [... 384 1e-104
gi|145224430|ref|YP_001135108.1| hypothetical protein Mflv_3848 ... 382 4e-104
gi|296170565|ref|ZP_06852149.1| conserved hypothetical protein [... 379 4e-103
gi|126433739|ref|YP_001069430.1| hypothetical protein Mjls_1136 ... 377 1e-102
gi|108798079|ref|YP_638276.1| hypothetical protein Mmcs_1107 [My... 377 1e-102
gi|108801088|ref|YP_641285.1| hypothetical protein Mmcs_4124 [My... 350 1e-94
gi|289751807|ref|ZP_06511185.1| LOW QUALITY PROTEIN: conserved h... 338 8e-91
gi|333919787|ref|YP_004493368.1| hypothetical protein AS9A_2119 ... 313 2e-83
gi|300787328|ref|YP_003767619.1| hypothetical protein AMED_5457 ... 311 7e-83
gi|54024865|ref|YP_119107.1| hypothetical protein nfa28960 [Noca... 272 5e-71
gi|256376051|ref|YP_003099711.1| nitroreductase [Actinosynnema m... 243 3e-62
gi|256376540|ref|YP_003100200.1| nitroreductase [Actinosynnema m... 224 1e-56
gi|331694589|ref|YP_004330828.1| nitroreductase [Pseudonocardia ... 223 2e-56
gi|317507618|ref|ZP_07965331.1| hypothetical protein HMPREF9336_... 222 8e-56
gi|331696254|ref|YP_004332493.1| nitroreductase [Pseudonocardia ... 200 3e-49
gi|326332436|ref|ZP_08198712.1| hypothetical protein NBCG_03882 ... 188 9e-46
gi|120401196|ref|YP_951025.1| hypothetical protein Mvan_0168 [My... 184 2e-44
gi|134099020|ref|YP_001104681.1| hypothetical protein SACE_2458 ... 181 1e-43
gi|302867182|ref|YP_003835819.1| nitroreductase [Micromonospora ... 180 2e-43
gi|315506409|ref|YP_004085296.1| nitroreductase [Micromonospora ... 180 3e-43
gi|119868659|ref|YP_938611.1| hypothetical protein Mkms_2624 [My... 178 1e-42
gi|108799546|ref|YP_639743.1| hypothetical protein Mmcs_2579 [My... 178 1e-42
gi|325001930|ref|ZP_08123042.1| hypothetical protein PseP1_24351... 177 1e-42
gi|145594126|ref|YP_001158423.1| hypothetical protein Strop_1579... 177 3e-42
gi|119715233|ref|YP_922198.1| hypothetical protein Noca_0990 [No... 173 3e-41
gi|333921514|ref|YP_004495095.1| hypothetical protein AS9A_3857 ... 173 4e-41
gi|159037164|ref|YP_001536417.1| hypothetical protein Sare_1530 ... 172 1e-40
gi|111017049|ref|YP_700021.1| hypothetical protein RHA1_ro00027 ... 167 3e-39
gi|111017053|ref|YP_700025.1| hypothetical protein RHA1_ro00031 ... 163 4e-38
>gi|15842704|ref|NP_337741.1| hypothetical protein MT3217 [Mycobacterium tuberculosis CDC1551]
gi|345462018|ref|NP_217647.2| hypothetical protein Rv3131 [Mycobacterium tuberculosis H37Rv]
gi|13883025|gb|AAK47555.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=344
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/332 (100%), Positives = 332/332 (100%), Gaps = 0/332 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI
Sbjct 13 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 72
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR
Sbjct 73 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 132
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL
Sbjct 133 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 192
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD
Sbjct 193 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 252
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG
Sbjct 253 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 312
Query 301 WAPINADPLPPTPRRELSQVVEWPEELLRQRC 332
WAPINADPLPPTPRRELSQVVEWPEELLRQRC
Sbjct 313 WAPINADPLPPTPRRELSQVVEWPEELLRQRC 344
>gi|31794307|ref|NP_856800.1| hypothetical protein Mb3155 [Mycobacterium bovis AF2122/97]
gi|121639014|ref|YP_979238.1| hypothetical protein BCG_3154 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148662985|ref|YP_001284508.1| hypothetical protein MRA_3163 [Mycobacterium tuberculosis H37Ra]
71 more sequence titles
Length=332
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/332 (100%), Positives = 332/332 (100%), Gaps = 0/332 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI
Sbjct 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR
Sbjct 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL
Sbjct 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD
Sbjct 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG
Sbjct 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
Query 301 WAPINADPLPPTPRRELSQVVEWPEELLRQRC 332
WAPINADPLPPTPRRELSQVVEWPEELLRQRC
Sbjct 301 WAPINADPLPPTPRRELSQVVEWPEELLRQRC 332
>gi|289571341|ref|ZP_06451568.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289545095|gb|EFD48743.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=333
Score = 525 bits (1351), Expect = 5e-147, Method: Compositional matrix adjust.
Identities = 264/268 (99%), Positives = 264/268 (99%), Gaps = 0/268 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI
Sbjct 13 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 72
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR
Sbjct 73 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 132
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL
Sbjct 133 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 192
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD
Sbjct 193 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 252
Query 241 DRLARLRAGEAASIVLLTATAMGLACCP 268
DRLARLRAGEAASIVLLTATAMG P
Sbjct 253 DRLARLRAGEAASIVLLTATAMGAGVLP 280
>gi|183981533|ref|YP_001849824.1| hypothetical protein MMAR_1518 [Mycobacterium marinum M]
gi|183174859|gb|ACC39969.1| conserved protein [Mycobacterium marinum M]
Length=332
Score = 506 bits (1304), Expect = 1e-141, Method: Compositional matrix adjust.
Identities = 250/331 (76%), Positives = 275/331 (84%), Gaps = 0/331 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MN FPD T+RTVLTLA RAPSIHNTQPWRW+V SLELFS PDMQL STDPDGR+LI
Sbjct 1 MNAQFPDVGTLRTVLTLATRAPSIHNTQPWRWQVTSRSLELFSEPDMQLHSTDPDGRDLI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
+SCGVALHHCVVALAS+GWQA V R PDP + HLA++ +Q PDQ D+ALAAAIPRRR
Sbjct 61 ISCGVALHHCVVALASMGWQATVTRIPDPDNSRHLASLELQAKPPDQGDIALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRRAYS WPV GDIA MAAR AR V LRQV ALD+M+ +VAQAV DH T++EY+REL
Sbjct 121 TDRRAYSSWPVAAGDIAQMAARVARCDVALRQVEALDKMREVVAQAVWDHATNDEYMREL 180
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
T WSGRYG+VAGVPARN PPSD APIPGRLFAGPGL+QPS V PA D A ILALGTE D
Sbjct 181 TTWSGRYGAVAGVPARNTPPSDQDAPIPGRLFAGPGLAQPSGVSPAADSAVILALGTEED 240
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DR +RLRAGEA S VLLTATAMGLA CPITEPLE+ KTR A+R +VFG YPQMLLRVG
Sbjct 241 DRASRLRAGEATSAVLLTATAMGLASCPITEPLEVHKTRQAIRKDVFGGSAYPQMLLRVG 300
Query 301 WAPINADPLPPTPRRELSQVVEWPEELLRQR 331
WAPINADPLP TPRR LS+VVEWPE+LL +R
Sbjct 301 WAPINADPLPATPRRNLSRVVEWPEQLLDER 331
>gi|240168622|ref|ZP_04747281.1| hypothetical protein MkanA1_04875 [Mycobacterium kansasii ATCC
12478]
Length=332
Score = 502 bits (1292), Expect = 4e-140, Method: Compositional matrix adjust.
Identities = 253/331 (77%), Positives = 275/331 (84%), Gaps = 0/331 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MN FPDA +R VLTLA RAPS+HNTQPWRWRV SL+LFS PDMQL STDPDGR+LI
Sbjct 1 MNAQFPDAGALRAVLTLATRAPSVHNTQPWRWRVGAPSLDLFSEPDMQLHSTDPDGRDLI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
+SCGVALHHCVVALAS+GW+AKVNR PDP + HLA I V+ D AD+ALAAAIPRRR
Sbjct 61 ISCGVALHHCVVALASMGWRAKVNRLPDPDNPRHLAAIEVRAQDADHADIALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPV GGD+A MAARAAR GVMLRQV ALD+M++IVAQAV H DE Y+REL
Sbjct 121 TDRRVYSSWPVAGGDVAQMAARAARCGVMLRQVDALDKMRSIVAQAVWRHAGDEGYIREL 180
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
T WSGRYG VAGVPARN PPSD SAPIPGRLFA P L+QPS V PADDG ILALGT+ D
Sbjct 181 TTWSGRYGGVAGVPARNTPPSDRSAPIPGRLFAAPALAQPSGVSPADDGGVILALGTDQD 240
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DR++RLRAGEA S VLLTATAMGLA CPITEPLEI TRDAVRA+VFG GYPQMLLRVG
Sbjct 241 DRVSRLRAGEATSAVLLTATAMGLASCPITEPLEIQSTRDAVRADVFGDSGYPQMLLRVG 300
Query 301 WAPINADPLPPTPRRELSQVVEWPEELLRQR 331
WAPINADPLP TPRR LSQVV+ P ELL +R
Sbjct 301 WAPINADPLPATPRRSLSQVVDGPRELLEER 331
>gi|118617912|ref|YP_906244.1| hypothetical protein MUL_2421 [Mycobacterium ulcerans Agy99]
gi|118570022|gb|ABL04773.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=348
Score = 501 bits (1289), Expect = 9e-140, Method: Compositional matrix adjust.
Identities = 248/331 (75%), Positives = 273/331 (83%), Gaps = 0/331 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MN FPD T+RTVLTLA RAPSIHNTQPWRW+V SLELF PDMQL STDPDGR+LI
Sbjct 17 MNAQFPDVGTLRTVLTLATRAPSIHNTQPWRWQVTSRSLELFPEPDMQLHSTDPDGRDLI 76
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
+SCGVALHHCVVALAS+GWQA V R PDP + HLA++ +Q PDQ D+ALAAAIPRRR
Sbjct 77 ISCGVALHHCVVALASMGWQATVTRIPDPDNSRHLASLELQAKPPDQGDIALAAAIPRRR 136
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TD RAYS WPV GDIA MAAR AR V LRQV ALD+M+ +VAQAV DH T++EY+REL
Sbjct 137 TDWRAYSSWPVAAGDIAQMAARVARCDVALRQVEALDKMREVVAQAVWDHATNDEYMREL 196
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
T WSGRYG+VAGVPARN PPSD APIPGRLFAGPGL+QPS V PA D A ILALGTE D
Sbjct 197 TTWSGRYGAVAGVPARNTPPSDQDAPIPGRLFAGPGLAQPSGVSPAADSAVILALGTEED 256
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DR +RLRAGEA S VLLTATAMGLA CPITEPLE+ KTR A+R +VFG YPQMLLRVG
Sbjct 257 DRASRLRAGEATSAVLLTATAMGLASCPITEPLEVHKTRQAIRKDVFGGSAYPQMLLRVG 316
Query 301 WAPINADPLPPTPRRELSQVVEWPEELLRQR 331
WAPINADPLP TPRR LS+VVEWPE+LL +R
Sbjct 317 WAPINADPLPATPRRNLSRVVEWPEQLLDER 347
>gi|240171846|ref|ZP_04750505.1| hypothetical protein MkanA1_21200 [Mycobacterium kansasii ATCC
12478]
Length=335
Score = 453 bits (1165), Expect = 2e-125, Method: Compositional matrix adjust.
Identities = 224/323 (70%), Positives = 259/323 (81%), Gaps = 0/323 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M HFPDA TVRTVLTLA RAPS+HNTQPWRWRV SL L++ +QL +TDP+GR+LI
Sbjct 3 MTAHFPDAGTVRTVLTLASRAPSVHNTQPWRWRVGDASLHLYADTSLQLPNTDPEGRDLI 62
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG AL+HC++ALA+ GWQAKV R P+P D HLA+I V DQ D+ LAAAIPRRR
Sbjct 63 LSCGAALNHCIIALAATGWQAKVCRLPNPADPSHLASIEVSRQNADQLDIMLAAAIPRRR 122
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPVP DIALMAARAAR GV + QV A+D++ A+VA++V DH +D +YL EL
Sbjct 123 TDRRHYSFWPVPVSDIALMAARAARNGVTVHQVDAMDKLNAVVAKSVWDHASDADYLAEL 182
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
T WSGR+ S GVPARN P DP+A IP R FAGP L+ P DV PADD A +LALGT TD
Sbjct 183 TAWSGRHASAVGVPARNTPIPDPAAAIPSRRFAGPTLAMPPDVSPADDNAVMLALGTRTD 242
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRLA+LRAGEA S+VLLTATAMGLA CP+TEPLEIA+TR AVRA+VFG YPQMLLRVG
Sbjct 243 DRLAQLRAGEATSVVLLTATAMGLASCPVTEPLEIAETRAAVRADVFGDSQYPQMLLRVG 302
Query 301 WAPINADPLPPTPRRELSQVVEW 323
WAPINADPLP TPRR+LS++VEW
Sbjct 303 WAPINADPLPSTPRRDLSEIVEW 325
>gi|183983485|ref|YP_001851776.1| hypothetical protein MMAR_3502 [Mycobacterium marinum M]
gi|183176811|gb|ACC41921.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=333
Score = 437 bits (1125), Expect = 9e-121, Method: Compositional matrix adjust.
Identities = 223/332 (68%), Positives = 266/332 (81%), Gaps = 2/332 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MN HFPDA TVRTVLTLA RAPS+HNTQPWRW+V T+L L++ +QL +TDP+GR+LI
Sbjct 1 MNAHFPDAGTVRTVLTLASRAPSVHNTQPWRWQVGATTLHLYADTSLQLPNTDPEGRDLI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
SCG AL+HCV+ALA++GW AKV R P+P D HLA + V PDQ ++ LAAAIPRRR
Sbjct 61 SSCGAALNHCVIALAAVGWHAKVARLPNPADPTHLAALEVSRHTPDQLNITLAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPVP D+ALMAARAAR GV LRQV A D++ AIVA++V DH D+EYL EL
Sbjct 121 TDRRHYSFWPVPVSDVALMAARAARCGVSLRQVDATDKLNAIVAKSVWDHAADDEYLAEL 180
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
WSGR+ S +GVPARN P SDP+AP+P RLFAG L+ P+D PADD A +LALGT TD
Sbjct 181 NAWSGRHASASGVPARNTPVSDPAAPLPSRLFAGSTLAMPADAAPADDNAVMLALGTRTD 240
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRLA+LRAGEA S+VLLTATAMGLA CP+TEPLEIA+TR++VR +VFG YPQMLLRVG
Sbjct 241 DRLAQLRAGEATSVVLLTATAMGLASCPVTEPLEIAETRESVRTDVFGNNDYPQMLLRVG 300
Query 301 WAPINADPLPPTPRRELSQVVEWPEELLRQRC 332
WAPINADPLP TPRR L+++VEW + R++C
Sbjct 301 WAPINADPLPSTPRRPLAEIVEWMSD--REQC 330
>gi|296169061|ref|ZP_06850721.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896252|gb|EFG75913.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=332
Score = 434 bits (1116), Expect = 9e-120, Method: Compositional matrix adjust.
Identities = 218/323 (68%), Positives = 251/323 (78%), Gaps = 1/323 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MNT FPDA TVRTVL+LA RAPS+HN+QPWRWRV SL L++ QL + DPDGR+L+
Sbjct 1 MNTRFPDAGTVRTVLSLASRAPSVHNSQPWRWRVDAASLHLYADDSRQLPNIDPDGRDLM 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG ALHHCVVALA++GW +KV R P+P D HLA I + P D D+ALAAAIPRRR
Sbjct 61 LSCGAALHHCVVALAAVGWLSKVTRLPNPADPSHLAAIELSPHRADTVDIALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPVP GD+ALMAARAAR GV L QV LD ++ IVA++V DH+ +E+YL EL
Sbjct 121 TDRRYYSSWPVPVGDVALMAARAARSGVTLCQVEDLDNLRKIVAKSVRDHL-NEDYLAEL 179
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
T WSGRY SVAGVPARN P DP+A IPGR FAGP L P D ADD A +LALGT D
Sbjct 180 TAWSGRYASVAGVPARNTPAPDPTAKIPGRYFAGPVLPMPPDSSSADDNAVVLALGTRND 239
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRLA+LRAGEA S+VLLTAT++GL CP+TEPLE TR AV+A++FG YPQMLLRVG
Sbjct 240 DRLAQLRAGEATSVVLLTATSLGLVSCPVTEPLETPGTRAAVQADIFGDSNYPQMLLRVG 299
Query 301 WAPINADPLPPTPRRELSQVVEW 323
WAPINADPLP TPRREL+ VEW
Sbjct 300 WAPINADPLPATPRRELADFVEW 322
>gi|336457360|gb|EGO36371.1| nitroreductase family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=332
Score = 426 bits (1094), Expect = 4e-117, Method: Compositional matrix adjust.
Identities = 215/323 (67%), Positives = 245/323 (76%), Gaps = 1/323 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M FPD T+RTVL LA RAPS+HNTQPWRW V SL L++ QL +TDPDGR+LI
Sbjct 1 MTNRFPDEGTIRTVLALASRAPSVHNTQPWRWLVGQESLHLYADGGRQLPNTDPDGRDLI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG ALHHCVV A++GWQA+V R P+P D HLA I + D D+ALAAAIPRRR
Sbjct 61 LSCGAALHHCVVGFAAVGWQARVTRLPNPADPDHLAAIELSGGTADPVDIALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPVP GDIALMAARAAR GV L QV D++ IV Q+V DH+ + +YL EL
Sbjct 121 TDRRHYSSWPVPVGDIALMAARAARNGVTLCQVEDADKLHEIVKQSVWDHM-NRDYLVEL 179
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
WSGRY +VAGVPARN P SDP A IPGRLFAGP L+ PS A+D + +LALGT D
Sbjct 180 AAWSGRYAAVAGVPARNTPKSDPGAKIPGRLFAGPMLAMPSGSSAAEDNSVLLALGTRGD 239
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRLARLRAGEA S+VLLTAT+MGLA CP+TEPLE+A TR+AVRAE+FG YPQMLLR+G
Sbjct 240 DRLARLRAGEATSMVLLTATSMGLASCPVTEPLEVADTREAVRAEIFGGSNYPQMLLRIG 299
Query 301 WAPINADPLPPTPRRELSQVVEW 323
W PINADPLP TPRREL VEW
Sbjct 300 WPPINADPLPATPRRELRDFVEW 322
>gi|118463529|ref|YP_881694.1| hypothetical protein MAV_2502 [Mycobacterium avium 104]
gi|118164816|gb|ABK65713.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=332
Score = 424 bits (1089), Expect = 1e-116, Method: Compositional matrix adjust.
Identities = 214/323 (67%), Positives = 244/323 (76%), Gaps = 1/323 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M FPD T+RTVL LA RAPS+HNTQPWRW V SL L++ QL +TDPDGR+LI
Sbjct 1 MTNRFPDEGTIRTVLALASRAPSVHNTQPWRWLVGQESLHLYADGGRQLPNTDPDGRDLI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG ALHHCVV A++GWQA+V R P+P D HLA I + D D+ALAAAIPRRR
Sbjct 61 LSCGAALHHCVVGFAAVGWQARVTRLPNPADPDHLAAIELSGGTADPVDIALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPVP GDIALMAARAAR GV L QV D++ IV Q+V DH+ + +YL EL
Sbjct 121 TDRRHYSSWPVPVGDIALMAARAARNGVTLCQVEDADKLHEIVKQSVWDHM-NRDYLVEL 179
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
WSGRY +VAGVPARN P SDP A IPGRLFAGP L+ PS A+D + +LALGT D
Sbjct 180 AAWSGRYAAVAGVPARNTPKSDPGAKIPGRLFAGPMLAMPSGSSAAEDNSVLLALGTRGD 239
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRLARLRAGEA S+VLLTAT+MGLA CP+TEPLE+A TR+AVR E+FG YPQMLLR+G
Sbjct 240 DRLARLRAGEATSMVLLTATSMGLASCPVTEPLEVADTREAVRTEIFGGSNYPQMLLRIG 299
Query 301 WAPINADPLPPTPRRELSQVVEW 323
W PINADPLP TPRREL VEW
Sbjct 300 WPPINADPLPATPRRELCDFVEW 322
>gi|254775159|ref|ZP_05216675.1| hypothetical protein MaviaA2_10876 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=332
Score = 423 bits (1087), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 214/323 (67%), Positives = 243/323 (76%), Gaps = 1/323 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M FPD T+RTVL LA RAPS+HNTQPWRW V SL L++ QL +TDPDGR+LI
Sbjct 1 MTNRFPDEGTIRTVLALASRAPSVHNTQPWRWLVGQESLHLYADGGRQLPNTDPDGRDLI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG ALHHCVV A++GWQA+V R P+P D HLA I + D D+ALAAAIPRRR
Sbjct 61 LSCGAALHHCVVGFAAVGWQARVTRLPNPADPDHLAAIELSGGTADPVDIALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPVP GDIALMAARAAR GV L QV D++ IV Q+V DH+ + +YL EL
Sbjct 121 TDRRHYSSWPVPVGDIALMAARAARNGVTLCQVEDADKLHEIVKQSVWDHM-NRDYLVEL 179
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
WSGRY +VAGVPARN P SDP A IPGRLFAGP L+ PS A+D + +LALGT D
Sbjct 180 AAWSGRYAAVAGVPARNTPKSDPGAKIPGRLFAGPMLAMPSGSSAAEDNSVLLALGTRGD 239
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRLARLRAGEA S VLLTAT+MGLA CP+TEPLE+A TR+AVR E+FG YPQMLLR+G
Sbjct 240 DRLARLRAGEATSTVLLTATSMGLASCPVTEPLEVADTREAVRTEIFGGSNYPQMLLRIG 299
Query 301 WAPINADPLPPTPRRELSQVVEW 323
W PINADPLP TPRREL VEW
Sbjct 300 WPPINADPLPATPRRELCDFVEW 322
>gi|41407844|ref|NP_960680.1| hypothetical protein MAP1746c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396198|gb|AAS04063.1| hypothetical protein MAP_1746c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=342
Score = 422 bits (1085), Expect = 3e-116, Method: Compositional matrix adjust.
Identities = 214/323 (67%), Positives = 244/323 (76%), Gaps = 1/323 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M FPD T+RTVL LA RAPS+HNTQPWRW V SL L++ QL +TDPDGR+LI
Sbjct 11 MTNRFPDEGTIRTVLALASRAPSVHNTQPWRWLVGQESLHLYADGGRQLPNTDPDGRDLI 70
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG ALHHCVV A++GWQA+V R P+P D HLA I + D D+ALAAAIPRRR
Sbjct 71 LSCGAALHHCVVGFAAVGWQARVTRLPNPADPDHLAAIELSGGTADPVDIALAAAIPRRR 130
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPVP GDIALMAARAAR V L QV D++ IV Q+V DH+ + +YL EL
Sbjct 131 TDRRHYSSWPVPVGDIALMAARAARNRVTLCQVEDADKLHEIVKQSVWDHM-NRDYLVEL 189
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
WSGRY +VAGVPARN P SDP A IPGRLFAGP L+ PS A+D + +LALGT D
Sbjct 190 AAWSGRYAAVAGVPARNTPKSDPGAKIPGRLFAGPMLAMPSGSSAAEDNSVLLALGTRGD 249
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRLARLRAGEA S+VLLTAT+MGLA CP+TEPLE+A TR+AVRAE+FG YPQMLLR+G
Sbjct 250 DRLARLRAGEATSMVLLTATSMGLASCPVTEPLEVADTREAVRAEIFGGSNYPQMLLRIG 309
Query 301 WAPINADPLPPTPRRELSQVVEW 323
W PINADPLP TPRREL VEW
Sbjct 310 WPPINADPLPATPRRELRDFVEW 332
>gi|333991620|ref|YP_004524234.1| hypothetical protein JDM601_2980 [Mycobacterium sp. JDM601]
gi|333487588|gb|AEF36980.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=362
Score = 419 bits (1077), Expect = 3e-115, Method: Compositional matrix adjust.
Identities = 220/327 (68%), Positives = 251/327 (77%), Gaps = 12/327 (3%)
Query 9 ETVRTVLTLAVRAPSIHNTQPWRWRVCPTS----LELFSRPDMQLRSTDPDGRELILSCG 64
ETVRT L LA RAPS+HN+QPWRW+V + LELF+ PD+ LRS DPDGR LILSCG
Sbjct 16 ETVRTALQLAARAPSVHNSQPWRWKVQLATQQPRLELFANPDLHLRSVDPDGRGLILSCG 75
Query 65 VALHHCVVALASLGWQAKVNRFPDPKDRCHLATI-------GVQP-LVPDQADVALAAAI 116
ALHHCVVALA+LGW+ +V+R PDP HLA+I G P VP+Q +V+LAAAI
Sbjct 76 AALHHCVVALAALGWRCRVHRLPDPAHPDHLASIELFGPVPGRLPEQVPEQVNVSLAAAI 135
Query 117 PRRRTDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEY 176
PRRRTDRR +S WPV DIALM ARAAR GVMLR++ ALDR+ +VAQAV H TD +Y
Sbjct 136 PRRRTDRRYFSGWPVAAADIALMGARAARAGVMLRRIDALDRLNTVVAQAVFAHRTDYDY 195
Query 177 LRELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALG 236
L EL WSGRYGSVAGVPAR+ P AP+PGRLFA P L+QP PA+D A +LALG
Sbjct 196 LAELARWSGRYGSVAGVPARSVPAPSTGAPLPGRLFADPLLAQPPGAGPAEDRAVMLALG 255
Query 237 TETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQML 296
TE DDRLA+LRAGEA S+VLLTATA+GLA CP+TEPLEIA+TR AVR +VFG GYPQML
Sbjct 256 TEHDDRLAQLRAGEATSVVLLTATALGLASCPVTEPLEIAETRAAVRRDVFGTSGYPQML 315
Query 297 LRVGWAPINADPLPPTPRRELSQVVEW 323
LRVGWAPINADPLP TPRR L VEW
Sbjct 316 LRVGWAPINADPLPATPRRFLDDTVEW 342
>gi|120403535|ref|YP_953364.1| hypothetical protein Mvan_2547 [Mycobacterium vanbaalenii PYR-1]
gi|119956353|gb|ABM13358.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=330
Score = 416 bits (1068), Expect = 3e-114, Method: Compositional matrix adjust.
Identities = 208/321 (65%), Positives = 248/321 (78%), Gaps = 0/321 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M T+FPD+ T+R+ L+LA RAPS+HN+QPW+WRV SL LF+ PD+ L DPD R+ +
Sbjct 1 MTTNFPDSVTLRSALSLANRAPSVHNSQPWQWRVGDHSLHLFANPDLLLPHIDPDARDFM 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG AL+HCVVALA+LGWQ+KV+RFP+P D H+A I V + D+ LAAAIPRRR
Sbjct 61 LSCGTALNHCVVALAALGWQSKVHRFPNPADPNHVAAIQVHRYPAAELDITLAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPVP GDIALM ARAAR GVMLR+V LD +K +V +A H +D+ YL EL
Sbjct 121 TDRRHYSPWPVPRGDIALMGARAARAGVMLRRVDDLDALKRLVNEAAFQHQSDQGYLAEL 180
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
WSGRY S AGVPARN P D + PIP R FAG L Q + PADD AA+LALGT D
Sbjct 181 ATWSGRYASTAGVPARNVPDGDGTGPIPLRAFAGGVLPQTPNTEPADDNAAVLALGTVED 240
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRL+ LRAGEA SIVLLTATA+GLACCPITEPLEIA TR+AVR +VFG G+PQMLLRVG
Sbjct 241 DRLSWLRAGEATSIVLLTATALGLACCPITEPLEIADTREAVRRDVFGTDGHPQMLLRVG 300
Query 301 WAPINADPLPPTPRRELSQVV 321
WAP+NADPLP TPRR++++V+
Sbjct 301 WAPVNADPLPATPRRDVTEVI 321
>gi|41409371|ref|NP_962207.1| hypothetical protein MAP3273c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398191|gb|AAS05821.1| hypothetical protein MAP_3273c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459492|gb|EGO38431.1| nitroreductase family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=324
Score = 415 bits (1067), Expect = 4e-114, Method: Compositional matrix adjust.
Identities = 216/323 (67%), Positives = 247/323 (77%), Gaps = 1/323 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MNT FPD ETVRT L LA RAPS+HNTQPWRWR+ P L L++ P QL TDPDGR+LI
Sbjct 1 MNTGFPDPETVRTALALASRAPSVHNTQPWRWRIDPAGLHLYADPARQLPHTDPDGRDLI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG+AL HCV A A++GW+++V R PDP D HLAT+ P D DVALAAAIPRRR
Sbjct 61 LSCGIALQHCVTAFAAVGWRSRVRRLPDPDDPDHLATLEFSPQTADYVDVALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YSCWPVP GDIALMAARAAR GV L QV +D + IVAQ++ DH+T ++YL EL
Sbjct 121 TDRRHYSCWPVPVGDIALMAARAARAGVTLYQVQDVDGLHDIVAQSIRDHLT-QDYLAEL 179
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
T WSGRY SV+GVPARN P DP+A IP RLFAG L ADD A +LALGT D
Sbjct 180 TTWSGRYFSVSGVPARNTPFPDPAAKIPTRLFAGAALPMAQGSSAADDNAVVLALGTRHD 239
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRLARLRAGEA +VLLTAT+ GLA CP+TEPLE +TR AVRA++FG G +PQMLLRVG
Sbjct 240 DRLARLRAGEATGVVLLTATSAGLASCPVTEPLETPQTRAAVRADIFGDGHHPQMLLRVG 299
Query 301 WAPINADPLPPTPRRELSQVVEW 323
WAPINADPLP TPRR+L+ VEW
Sbjct 300 WAPINADPLPATPRRDLADFVEW 322
>gi|342861120|ref|ZP_08717769.1| hypothetical protein MCOL_19652 [Mycobacterium colombiense CECT
3035]
gi|342131564|gb|EGT84834.1| hypothetical protein MCOL_19652 [Mycobacterium colombiense CECT
3035]
Length=324
Score = 412 bits (1058), Expect = 5e-113, Method: Compositional matrix adjust.
Identities = 213/323 (66%), Positives = 249/323 (78%), Gaps = 1/323 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M+T FPDA T+RT LTLA RAPS+HNTQPWRWRV SL+L++ P QL +TDP+GR+LI
Sbjct 1 MDTRFPDAGTIRTALTLASRAPSVHNTQPWRWRVDAASLQLYADPGRQLPNTDPEGRDLI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
SCG ALHHCV A A++GW+++V+R P+ D HLATI + P D D+ALAAAIPRRR
Sbjct 61 RSCGTALHHCVAAFAAVGWRSRVSRLPNADDPAHLATIELSPQPADFVDIALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPVP GDIALMAARAAR GV L QV +D + IVA++V DH+T ++YL EL
Sbjct 121 TDRRHYSSWPVPTGDIALMAARAARAGVTLCQVEDIDTLHDIVAESVRDHLT-QDYLAEL 179
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
T WSGRY SVAGVPA N P SDP A IP RLFAG L D ADD A +LALGT D
Sbjct 180 TAWSGRYFSVAGVPAHNAPVSDPDAKIPSRLFAGAALPMAPDSSAADDNAVVLALGTRHD 239
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRLA+LRAGEA S+VLLTAT+ GLA CP+TEPLE +TR+AVR+++FG YPQMLLRVG
Sbjct 240 DRLAQLRAGEATSVVLLTATSTGLASCPVTEPLETTETREAVRSDIFGDSNYPQMLLRVG 299
Query 301 WAPINADPLPPTPRRELSQVVEW 323
WAPINADPLP TPRR+L VEW
Sbjct 300 WAPINADPLPATPRRDLGDFVEW 322
>gi|118463329|ref|YP_883260.1| hypothetical protein MAV_4111 [Mycobacterium avium 104]
gi|254776537|ref|ZP_05218053.1| hypothetical protein MaviaA2_17969 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118164616|gb|ABK65513.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=324
Score = 410 bits (1053), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 214/323 (67%), Positives = 245/323 (76%), Gaps = 1/323 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MNT FPD ETVRT L LA RAPS+HNTQPWRWR+ P L L++ P QL TDPDGR+LI
Sbjct 1 MNTGFPDPETVRTALALASRAPSVHNTQPWRWRIDPAGLHLYADPARQLPHTDPDGRDLI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG+AL HCV A A++GW+++V R PDP D HLAT+ P D DVALAAAIPRRR
Sbjct 61 LSCGIALQHCVTAFAAVGWRSRVRRLPDPDDPDHLATLEFSPQTADYVDVALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YSCWPVP GDIALMAARAAR GV L QV + + IVAQ++ DH+T ++YL EL
Sbjct 121 TDRRHYSCWPVPVGDIALMAARAARAGVTLYQVQDVGGLHDIVAQSIRDHLT-KDYLAEL 179
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
T WSGRY SV+GVPARN P DP+A IP RLFAG L DD A +LALGT D
Sbjct 180 TTWSGRYFSVSGVPARNTPFPDPAAKIPTRLFAGAALPMAPGSSAGDDNAVVLALGTRHD 239
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRLARLRAGEA +VLLTAT+ GLA CP+TEPLE +TR AVRA++FG G +PQMLLRVG
Sbjct 240 DRLARLRAGEATGVVLLTATSAGLASCPVTEPLETPQTRAAVRADIFGDGHHPQMLLRVG 299
Query 301 WAPINADPLPPTPRRELSQVVEW 323
WAPINADPLP TPRR+L+ VEW
Sbjct 300 WAPINADPLPATPRRDLADFVEW 322
>gi|118471183|ref|YP_888244.1| hypothetical protein MSMEG_3955 [Mycobacterium smegmatis str.
MC2 155]
gi|118172470|gb|ABK73366.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=334
Score = 406 bits (1044), Expect = 2e-111, Method: Compositional matrix adjust.
Identities = 202/323 (63%), Positives = 249/323 (78%), Gaps = 0/323 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MNTHFPD ET+ L LA+RAPSIHN+QPW+WRV S+ L++ D L STDPD R+L+
Sbjct 1 MNTHFPDTETIHAALALAMRAPSIHNSQPWQWRVGERSVHLYADLDRHLTSTDPDSRDLL 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG ALHHCV+A A+LGW A V+R P+P + HLA+I ++ P D+ALAAAIPRRR
Sbjct 61 LSCGAALHHCVIAFAALGWYASVHRLPNPAEPEHLASIELRRQTPTDLDIALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPV DIA+M ARAAR GVMLR+V +L R++ IVA+++ H D+ YLREL
Sbjct 121 TDRRHYSAWPVSHSDIAMMGARAARAGVMLRRVESLSRLQDIVAESIARHAADDGYLREL 180
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
T WSG+Y S AGVPAR+ P +P AP+ R+FAG L QP AD+GA +LALGT D
Sbjct 181 TAWSGKYASTAGVPARSAPKPEPGAPLSSRMFAGAALKQPDTGAGADEGAVVLALGTADD 240
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
R++RLRAGEA S++LLTATAMGLA CP+TEPLEI++TRDAV+AEVFGA +PQM+LRVG
Sbjct 241 TRMSRLRAGEATSLILLTATAMGLATCPVTEPLEISETRDAVQAEVFGASAFPQMMLRVG 300
Query 301 WAPINADPLPPTPRRELSQVVEW 323
WAP+NADPLPPTPRR ++ V W
Sbjct 301 WAPVNADPLPPTPRRHVADAVRW 323
>gi|254822202|ref|ZP_05227203.1| hypothetical protein MintA_19874 [Mycobacterium intracellulare
ATCC 13950]
Length=348
Score = 400 bits (1027), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 214/321 (67%), Positives = 244/321 (77%), Gaps = 0/321 (0%)
Query 5 FPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCG 64
FPD + + T+LTLA RAPSI NTQPWRWRV TSL L++ P MQL +TDPDGR+LILSCG
Sbjct 20 FPDGQDIETILTLATRAPSIDNTQPWRWRVDRTSLHLYTDPGMQLPNTDPDGRDLILSCG 79
Query 65 VALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRRTDRR 124
ALHHCVVALA++GW+A V+R PDP D HLA I V P D+A++ LA AIPRRRTDRR
Sbjct 80 AALHHCVVALAAMGWRADVHRLPDPADPDHLAAIEVSPHSSDRAEIVLAEAIPRRRTDRR 139
Query 125 AYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLRELTIWS 184
YS PV +IA MAA AAR GV LR V A + + IV +A L H TD +YL EL WS
Sbjct 140 TYSARPVAATEIAAMAAVAARMGVTLRVVDARESLHDIVKRAALSHATDRDYLVELATWS 199
Query 185 GRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETDDRLA 244
GRYGS AGVPARN P D APIPGR+FAGPGL+QP PA+D A IL LG+E DDRLA
Sbjct 200 GRYGSRAGVPARNIPEHDCGAPIPGRIFAGPGLAQPPGTSPAEDNAVILVLGSEADDRLA 259
Query 245 RLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVGWAPI 304
+LRAGEA S +LLTATAMGLA CPITEPLEI TRDAVR +V+GA GYPQMLLRVGWA
Sbjct 260 QLRAGEATSALLLTATAMGLASCPITEPLEIPDTRDAVRDDVWGAQGYPQMLLRVGWAAD 319
Query 305 NADPLPPTPRRELSQVVEWPE 325
+A LPPTPRR LS VV+W +
Sbjct 320 SAAALPPTPRRALSDVVQWSD 340
>gi|108798051|ref|YP_638248.1| hypothetical protein Mmcs_1078 [Mycobacterium sp. MCS]
gi|119867146|ref|YP_937098.1| hypothetical protein Mkms_1094 [Mycobacterium sp. KMS]
gi|126433711|ref|YP_001069402.1| hypothetical protein Mjls_1105 [Mycobacterium sp. JLS]
gi|108768470|gb|ABG07192.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693235|gb|ABL90308.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126233511|gb|ABN96911.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=330
Score = 385 bits (989), Expect = 5e-105, Method: Compositional matrix adjust.
Identities = 185/307 (61%), Positives = 235/307 (77%), Gaps = 0/307 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M T+ PD +T+ L+LA+RAPSIHN+QPWRWRV S+ L++ L TDPDGREL+
Sbjct 1 MTTYGPDRDTIHAALSLAIRAPSIHNSQPWRWRVGEDSVHLYADTPPHLSHTDPDGRELL 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
+SCG AL+HCV+AL++LGW++ V+RFP+P + HLA + + P + D+ALAAAIPRRR
Sbjct 61 ISCGAALNHCVIALSALGWRSVVHRFPNPAEPLHLAALEMHRQAPGEVDIALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR +S WPV GD+ALM ARAAR GV +R+V +A++A+AV DH +D +Y EL
Sbjct 121 TDRRHFSAWPVAIGDVALMGARAARAGVTMRRVETTSAFRAVLAKAVWDHASDPDYRDEL 180
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
++WSGR+ S GVPARN P S P A +PGRLFAGP L QP++ PADD A +L+LGT D
Sbjct 181 SVWSGRHASTVGVPARNAPVSVPEARVPGRLFAGPALDQPAEADPADDNAVLLSLGTAGD 240
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
D L+RLRAGEA S+VLLTATA+GLA CP+TEPLEI +TRDAVRA+VFG YPQ+L RVG
Sbjct 241 DDLSRLRAGEATSLVLLTATALGLATCPVTEPLEIPETRDAVRADVFGESAYPQLLFRVG 300
Query 301 WAPINAD 307
WAP+NAD
Sbjct 301 WAPVNAD 307
>gi|315444763|ref|YP_004077642.1| nitroreductase family protein [Mycobacterium sp. Spyr1]
gi|315263066|gb|ADT99807.1| nitroreductase family protein [Mycobacterium sp. Spyr1]
Length=329
Score = 384 bits (985), Expect = 1e-104, Method: Compositional matrix adjust.
Identities = 203/321 (64%), Positives = 244/321 (77%), Gaps = 1/321 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MN HFPDAET+R+ L+LA RAPS+HN+QPW+WRV S+ L++ PD+ L TDPD R+L+
Sbjct 1 MNAHFPDAETLRSALSLANRAPSVHNSQPWQWRVGHESVHLYANPDLLLPHTDPDARDLM 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG ALHHCVVALA+LGWQAK++RFP+P + HLA + ++ DV LAAAIPRRR
Sbjct 61 LSCGAALHHCVVALAALGWQAKIHRFPNPAEPDHLAALELRRYPAADLDVTLAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPVP GD+ALM ARAAR GV LR+V L +K +V+ A H TD YL EL
Sbjct 121 TDRRYYSSWPVPQGDVALMGARAARAGVALRRVDDLAGLKRLVSAAAFQHRTDAGYLTEL 180
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
WSGRY + AGVPAR+ P++ + + R FAG LSQ D D A +LALGT D
Sbjct 181 AAWSGRYAATAGVPARSV-PAETAGAVSARAFAGGVLSQTPDTAADQDSAVVLALGTAGD 239
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRL+ LRAGEA S+VLLTATA+GLA CPITEPLEIA+TR+AVR +VFG GYPQMLLRVG
Sbjct 240 DRLSWLRAGEATSVVLLTATALGLASCPITEPLEIAETREAVRRDVFGTDGYPQMLLRVG 299
Query 301 WAPINADPLPPTPRRELSQVV 321
WAP+NADPLP TPRR+LS+VV
Sbjct 300 WAPVNADPLPSTPRRDLSEVV 320
>gi|145224430|ref|YP_001135108.1| hypothetical protein Mflv_3848 [Mycobacterium gilvum PYR-GCK]
gi|145216916|gb|ABP46320.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=329
Score = 382 bits (982), Expect = 4e-104, Method: Compositional matrix adjust.
Identities = 203/321 (64%), Positives = 243/321 (76%), Gaps = 1/321 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MN HFPDAET+R+ L+LA RAPS+HN+QPW+WRV S+ L++ PD+ L TDPD R+L+
Sbjct 1 MNAHFPDAETLRSALSLANRAPSVHNSQPWQWRVGHESVHLYANPDLLLPHTDPDARDLM 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG ALHHCVVALA+LGWQAK++RFP+P + HLA + ++ DV LAAAIPRRR
Sbjct 61 LSCGAALHHCVVALAALGWQAKIHRFPNPAEPDHLAALELRRYPAADLDVTLAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS WPVP GD+ALM ARAAR GV LR+V L +K +V+ A H TD YL EL
Sbjct 121 TDRRYYSSWPVPQGDVALMGARAARAGVALRRVDDLAGLKRLVSAAAFQHRTDAGYLTEL 180
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
WSGRY + AGVPAR+ P++ + + R FAG L Q D D A +LALGT D
Sbjct 181 AAWSGRYAATAGVPARSV-PAETAGAVSARAFAGGVLPQTPDTAADQDNAVVLALGTAGD 239
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
DRL+ LRAGEA S+VLLTATA+GLA CPITEPLEIA+TR+AVR +VFGA GYPQMLLRVG
Sbjct 240 DRLSWLRAGEATSVVLLTATALGLASCPITEPLEIAETREAVRRDVFGADGYPQMLLRVG 299
Query 301 WAPINADPLPPTPRRELSQVV 321
WAP+NADPLP TPRR LS+VV
Sbjct 300 WAPVNADPLPSTPRRNLSEVV 320
>gi|296170565|ref|ZP_06852149.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894797|gb|EFG74522.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=372
Score = 379 bits (972), Expect = 4e-103, Method: Compositional matrix adjust.
Identities = 196/326 (61%), Positives = 231/326 (71%), Gaps = 0/326 (0%)
Query 4 HFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSC 63
HFPD + LTLA RAPSI NTQPWRWRV TSL L++ M L DPDGR+L LSC
Sbjct 42 HFPDDGVIGAALTLAGRAPSIENTQPWRWRVDRTSLHLYADARMHLPHADPDGRDLTLSC 101
Query 64 GVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRRTDR 123
G AL+HCV+ALA+ GW A+V+R PDP D HLA I V P PD+ D+ LA AIP+RRTDR
Sbjct 102 GAALNHCVIALAATGWLAEVHRLPDPADPGHLAAIEVSPRAPDRTDIKLAKAIPQRRTDR 161
Query 124 RAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLRELTIW 183
R YS PV D+A +AA A G+ L QV + R+ IV +A H T+ +YL EL W
Sbjct 162 RIYSARPVAASDVASLAAVAGGMGLRLHQVDEMRRLHEIVKRAAQTHATNRDYLVELARW 221
Query 184 SGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETDDRL 243
SGRYGS AGVPA + D A +PGR+FAGP L+QP PADD A IL LG++ DDRL
Sbjct 222 SGRYGSRAGVPAHSTTEHDCGATVPGRIFAGPALAQPPGASPADDNAVILVLGSDADDRL 281
Query 244 ARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVGWAP 303
A+LRAGEAAS +LLTATAMGLA CPITEPLEI +TR AVR E++GA GYPQMLLR+GWAP
Sbjct 282 AQLRAGEAASAILLTATAMGLASCPITEPLEIPETRAAVRDEIWGATGYPQMLLRLGWAP 341
Query 304 INADPLPPTPRRELSQVVEWPEELLR 329
+A LPPTPRR L VV+W + R
Sbjct 342 NSAAALPPTPRRALDDVVQWSRQTDR 367
>gi|126433739|ref|YP_001069430.1| hypothetical protein Mjls_1136 [Mycobacterium sp. JLS]
gi|126233539|gb|ABN96939.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=330
Score = 377 bits (968), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 187/323 (58%), Positives = 231/323 (72%), Gaps = 0/323 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M P +T+RT L+LA RAPSIHN+QPW W+V S+ L+ ++L TDPD RELI
Sbjct 1 MTVRSPGTDTLRTALSLANRAPSIHNSQPWHWQVGAHSVHLYVDESLRLAHTDPDARELI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
+SCG AL+HC VAL +LGW K+ R P+P D HLA++ + P ++D+ALAAAIPRRR
Sbjct 61 VSCGAALNHCAVALTALGWPPKIRRLPNPDDPSHLASLELHSHPPSESDIALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR +S WPV GDIALM +RAAR GV +R+V + +A AV H D EYL EL
Sbjct 121 TDRRHFSDWPVSMGDIALMGSRAARAGVTMRRVELTPAFRTTLALAVGQHAADPEYLAEL 180
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
T W+GR+ S GVPARN P SDP+A +P RLFAG L QP+ P+ D ++ALGT TD
Sbjct 181 TGWTGRHASTVGVPARNTPESDPTAAVPARLFAGTTLEQPAGAEPSQDSGVVVALGTATD 240
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
D + RLRAGEAASIVLLTAT +GLA CP+TEPLEI+ TRDA+R +VF YPQ+LLRVG
Sbjct 241 DVMGRLRAGEAASIVLLTATTLGLATCPVTEPLEISATRDAIRDDVFDDVMYPQILLRVG 300
Query 301 WAPINADPLPPTPRRELSQVVEW 323
WAP+NADPLP TPRR L ++ W
Sbjct 301 WAPVNADPLPATPRRPLGELATW 323
>gi|108798079|ref|YP_638276.1| hypothetical protein Mmcs_1107 [Mycobacterium sp. MCS]
gi|119867175|ref|YP_937127.1| hypothetical protein Mkms_1124 [Mycobacterium sp. KMS]
gi|108768498|gb|ABG07220.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693264|gb|ABL90337.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=330
Score = 377 bits (968), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 187/323 (58%), Positives = 231/323 (72%), Gaps = 0/323 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M P +T+RT L+LA RAPSIHN+QPW W+V S+ L+ ++L TDPD RELI
Sbjct 1 MTVRSPGTDTLRTALSLANRAPSIHNSQPWHWQVGAHSVHLYVDESLRLAHTDPDARELI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
+SCG AL+HC VAL +LGW K+ R P+P D HLA++ + P ++D+ALAAAIPRRR
Sbjct 61 VSCGAALNHCAVALTALGWPPKIRRLPNPDDPSHLASLELHSHPPSESDIALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR +S WPV GDIALM +RAAR GV +R+V + +A AV H D EYL EL
Sbjct 121 TDRRHFSDWPVSMGDIALMGSRAARAGVTMRRVELTPTFRTTLALAVGQHAADPEYLAEL 180
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
T W+GR+ S GVPARN P SDP+A +P RLFAG L QP+ P+ D ++ALGT TD
Sbjct 181 TGWTGRHASTVGVPARNTPESDPTAAVPARLFAGTTLEQPAGAEPSQDSGVVVALGTVTD 240
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
D + RLRAGEAASIVLLTAT +GLA CP+TEPLEI+ TRDA+R +VF YPQ+LLRVG
Sbjct 241 DVMGRLRAGEAASIVLLTATTLGLATCPVTEPLEISATRDAIRDDVFDDVMYPQILLRVG 300
Query 301 WAPINADPLPPTPRRELSQVVEW 323
WAP+NADPLP TPRR L ++ W
Sbjct 301 WAPVNADPLPATPRRPLGELATW 323
>gi|108801088|ref|YP_641285.1| hypothetical protein Mmcs_4124 [Mycobacterium sp. MCS]
gi|119870229|ref|YP_940181.1| hypothetical protein Mkms_4199 [Mycobacterium sp. KMS]
gi|126436926|ref|YP_001072617.1| hypothetical protein Mjls_4355 [Mycobacterium sp. JLS]
gi|108771507|gb|ABG10229.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119696318|gb|ABL93391.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126236726|gb|ABO00127.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=318
Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/315 (60%), Positives = 231/315 (74%), Gaps = 0/315 (0%)
Query 3 THFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILS 62
T FPDA+T+R L AVRAPS+HN+QPWRW V L+LF+ P + LR DPDGR+ +LS
Sbjct 2 TSFPDADTLRAALASAVRAPSVHNSQPWRWHVGADRLDLFAVPRLHLRHIDPDGRDFLLS 61
Query 63 CGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRRTD 122
CG LHH VVALA+LGWQA+V RFPDP D HLA + + P P ++ALAAAIPRRRTD
Sbjct 62 CGATLHHAVVALAALGWQARVQRFPDPSDTNHLAVLTLSPQAPTSQELALAAAIPRRRTD 121
Query 123 RRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLRELTI 182
RR YS V DIA+M ARAAR GV LR+V +L ++A V AV +H+ D+ YLRELT
Sbjct 122 RRRYSSREVSPADIAVMGARAARFGVSLRRVESLTALRAAVDLAVREHLHDDAYLRELTA 181
Query 183 WSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETDDR 242
W+GR+GSVAGVPA N PP+D +A +P R+FAG ++QPS D AA+LALGT DD
Sbjct 182 WTGRHGSVAGVPATNIPPADTAAAVPPRVFAGTAMAQPSGSADDADNAAVLALGTRDDDA 241
Query 243 LARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVGWA 302
+RLRAGEA S+VLLTAT++GLA CP+TEPLEIA TR +R E+F A +PQMLLR+GW
Sbjct 242 PSRLRAGEATSVVLLTATSIGLASCPVTEPLEIAATRATLREEIFEAQAHPQMLLRIGWL 301
Query 303 PINADPLPPTPRREL 317
P +A LP TPRR L
Sbjct 302 PRDAVALPATPRRPL 316
>gi|289751807|ref|ZP_06511185.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T92]
gi|289692394|gb|EFD59823.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T92]
Length=175
Score = 338 bits (866), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/170 (100%), Positives = 170/170 (100%), Gaps = 0/170 (0%)
Query 163 VAQAVLDHVTDEEYLRELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSD 222
VAQAVLDHVTDEEYLRELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSD
Sbjct 6 VAQAVLDHVTDEEYLRELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSD 65
Query 223 VLPADDGAAILALGTETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAV 282
VLPADDGAAILALGTETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAV
Sbjct 66 VLPADDGAAILALGTETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAV 125
Query 283 RAEVFGAGGYPQMLLRVGWAPINADPLPPTPRRELSQVVEWPEELLRQRC 332
RAEVFGAGGYPQMLLRVGWAPINADPLPPTPRRELSQVVEWPEELLRQRC
Sbjct 126 RAEVFGAGGYPQMLLRVGWAPINADPLPPTPRRELSQVVEWPEELLRQRC 175
>gi|333919787|ref|YP_004493368.1| hypothetical protein AS9A_2119 [Amycolicicoccus subflavus DQS3-9A1]
gi|333482008|gb|AEF40568.1| hypothetical protein AS9A_2119 [Amycolicicoccus subflavus DQS3-9A1]
Length=327
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/322 (50%), Positives = 216/322 (68%), Gaps = 1/322 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M+ PDA+T+R+ ++LA+RAPS+HNTQPW WR+ S+ L++ + LR TDPD R+L+
Sbjct 1 MDRQMPDADTIRSAVSLALRAPSVHNTQPWLWRIGDESINLYADRSLHLRHTDPDQRDLV 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG ALHH VALA+LGW+++V+R P+P D+ HLA++ + P++ DVALAAAIPRRR
Sbjct 61 LSCGAALHHMRVALAALGWRSEVHRLPNPVDKDHLASLVLHRHHPNEKDVALAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR Y WPVP ++ +A A GV+ R + + R ++ A H TD Y EL
Sbjct 121 TDRRHYGAWPVPPQYLSRLAQCAEDEGVVFRVLESRGRFAELITDAAAIHTTDSAYQAEL 180
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAP-IPGRLFAGPGLSQPSDVLPADDGAAILALGTET 239
WSGR+GS GVPA + P ++ + I R FA P L+ A D A ++ L T +
Sbjct 181 ATWSGRHGSPDGVPAHSAPIAEITTEGISARQFAWPALAPAPGTDAASDEAEVVMLTTAS 240
Query 240 DDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRV 299
DD L+RLRAGEA+S V+L +T +GLA CPITEPLE+ TRD V+++V G PQ+ +RV
Sbjct 241 DDVLSRLRAGEASSAVMLESTVLGLASCPITEPLEVRSTRDQVQSDVLHDSGVPQIAIRV 300
Query 300 GWAPINADPLPPTPRRELSQVV 321
GWA INADPLP TPRR + +
Sbjct 301 GWAHINADPLPATPRRPVDDFI 322
>gi|300787328|ref|YP_003767619.1| hypothetical protein AMED_5457 [Amycolatopsis mediterranei U32]
gi|299796842|gb|ADJ47217.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340528835|gb|AEK44040.1| hypothetical protein RAM_27815 [Amycolatopsis mediterranei S699]
Length=336
Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 171/325 (53%), Positives = 216/325 (67%), Gaps = 4/325 (1%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M FPD TV+T + +AVRAPS+HN+QPW WR+ +SL L++ PD QLR TDPDGR+LI
Sbjct 1 MERGFPDDYTVKTAVAMAVRAPSVHNSQPWNWRIGHSSLHLYADPDRQLRETDPDGRDLI 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG ALHH +A A+LGW A+V+R P+P + HLA I +Q P Q +VA+AAAIPRRR
Sbjct 61 LSCGAALHHLRIAFAALGWTAEVHRLPNPDEPDHLAAITLQQHEPSQDEVAMAAAIPRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLR--QVSALDRMKAIVAQAVLDHVTDEEYLR 178
TDRR S W +P G + MA AA G +L+ + SA + + QA H + Y
Sbjct 121 TDRRRLSSWTMPRGHVEAMAKAAALEGTLLQVAENSARYHLATAIEQAADRHARNPAYRT 180
Query 179 ELTIWSGRYGSVAGVPARNEP-PSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGT 237
EL WSGR+ + GVPARN P P D + R FA P L+QP D DD +L L T
Sbjct 181 ELAAWSGRHAAPDGVPARNTPAPDDTPGALRTRSFADPLLTQPPDAKAEDDETVLLVLST 240
Query 238 ETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLL 297
+DDR++RLRAGEA S LLTATA GL+ CP+TEPLE+ RD V V G G +PQM+L
Sbjct 241 ASDDRMSRLRAGEATSAALLTATAFGLSSCPLTEPLELPDVRDTVTERVTG-GSFPQMVL 299
Query 298 RVGWAPINADPLPPTPRRELSQVVE 322
R+GWAP NADPL TPRR+L+ V++
Sbjct 300 RIGWAPANADPLTATPRRDLADVLQ 324
>gi|54024865|ref|YP_119107.1| hypothetical protein nfa28960 [Nocardia farcinica IFM 10152]
gi|54016373|dbj|BAD57743.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=335
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 165/323 (52%), Positives = 202/323 (63%), Gaps = 5/323 (1%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M+ PD TV T L LA RAPS+HN QPWRWR+ S+ L+ P L TDPD R+++
Sbjct 11 MHRGLPDDSTVATALALAGRAPSVHNVQPWRWRIDRHSVHLYLDPARALPRTDPDRRDVV 70
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
+SCG ALHH VA ++GW + V R PDP D HLATI + P D+A++AAIP+RR
Sbjct 71 ISCGAALHHLTVAFTAMGWASAVTRLPDPADENHLATIRLVPHRATGHDIAMSAAIPQRR 130
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVS--ALDRMKAIVAQAVLDHVTDEEYLR 178
TDRR Y+ P+P G L+A RAA G M+R V A R+ A A H D EY
Sbjct 131 TDRRRYAPLPLPPGYPGLLAERAAALGAMVRVVDQPARRRLVAAARAAADRHALDPEYGF 190
Query 179 ELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTE 238
EL +WSGR+ S GVPARN P +P R FA P L P+ L D A +L L T
Sbjct 191 ELALWSGRHSSDDGVPARNTPAPRAGDELPARRFAAPRLLDPATDL---DHADLLVLATP 247
Query 239 TDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLR 298
DDR ARLRAGEA S VLLTAT +GLA CP+TEPLE+ + RD VR V +PQ +LR
Sbjct 248 CDDRRARLRAGEALSAVLLTATNIGLATCPLTEPLEVGEQRDLVRRGVLNGTAHPQAVLR 307
Query 299 VGWAPINADPLPPTPRRELSQVV 321
VGWAP +A+PLP TPRR ++ VV
Sbjct 308 VGWAPADAEPLPRTPRRPVTDVV 330
>gi|256376051|ref|YP_003099711.1| nitroreductase [Actinosynnema mirum DSM 43827]
gi|255920354|gb|ACU35865.1| nitroreductase [Actinosynnema mirum DSM 43827]
Length=328
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/325 (49%), Positives = 202/325 (63%), Gaps = 4/325 (1%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M+ PD ET+R + LA RAPS+HNTQPWRWR+ +S+ L++ P L +TDPDG +L+
Sbjct 1 MDRGLPDDETIRAAVALACRAPSMHNTQPWRWRLGDSSVHLYADPQRCLPATDPDGADLV 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG ALHH VALA+LG +A V R P+ D HLA++ + P+ ++ALAAAI RRR
Sbjct 61 LSCGAALHHLRVALAALGMRAVVRRLPNASDPDHLASVELSRQEPEAEEIALAAAIQRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQV---SALDRMKAIVAQAVLDHVTDEEYL 177
TDRR YS W VP + + RA GV+ R+V A + VA+A D Y
Sbjct 121 TDRRRYSSWAVPRAVLEQLVDRAVEEGVVAREVLGTRARFELSLAVARAAAVQEADPAYR 180
Query 178 RELTIWSGRYGSVAGVPARNEPPSDPSAPIPG-RLFAGPGLSQPSDVLPADDGAAILALG 236
EL WSG + GVPA N P G R F L P + +DGA +L LG
Sbjct 181 SELRRWSGGHVEPEGVPAANAPLGQHRYGDVGMREFPSGELLCPENGTWEEDGATLLVLG 240
Query 237 TETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQML 296
T +DDRL+RL+AGEA S VLL ATA GL CP+++PLE+A+ R+ VR EV +PQ+
Sbjct 241 TTSDDRLSRLKAGEAMSAVLLEATAAGLVACPLSQPLEVAEARERVRDEVLDGSVFPQIA 300
Query 297 LRVGWAPINADPLPPTPRRELSQVV 321
LRVGWA +ADPLPPTPRR L +V+
Sbjct 301 LRVGWASFDADPLPPTPRRALDEVL 325
>gi|256376540|ref|YP_003100200.1| nitroreductase [Actinosynnema mirum DSM 43827]
gi|255920843|gb|ACU36354.1| nitroreductase [Actinosynnema mirum DSM 43827]
Length=325
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/324 (47%), Positives = 189/324 (59%), Gaps = 3/324 (0%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
MN PDA TVR +TLA RAPS+HNTQPWRWRV S++L + +L DPDG +L+
Sbjct 1 MNRGQPDAATVRAAVTLACRAPSVHNTQPWRWRVGARSVQLHADTGRRLPGVDPDGADLL 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG ALHH VALA++GW+A V R P P D HLAT+ VP A++ +A A+ RRR
Sbjct 61 LSCGAALHHLRVALAAVGWRALVRRMPSPDDPQHLATVEFARHVPTAAEIRMATALRRRR 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
TDRR YS W P + + A GV+ R + AI A + D Y EL
Sbjct 121 TDRRDYSNWAAPEAALERLERIAEAEGVVARVAGPAHLVPAISVAAAV-QAADPVYRVEL 179
Query 181 TIWSGR-YGSVAGVPARNEPPSDPS-APIPGRLFAGPGLSQPSDVLPADDGAAILALGTE 238
W+GR GS GVPA + P + + R F L+QP D AA+L LGT
Sbjct 180 RNWTGRGGGSPDGVPAASVPAAGSGRGVVRMREFPVGELAQPPGAGAERDEAALLVLGTI 239
Query 239 TDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLR 298
DD L RLR+GEA S VLL ATA G+A CP+T+PLE+ + R V VFG PQ++LR
Sbjct 240 RDDPLGRLRSGEAMSAVLLAATAAGMATCPLTQPLEVDEARYEVGRAVFGGDVVPQVVLR 299
Query 299 VGWAPINADPLPPTPRRELSQVVE 322
+GW A LP TPRR + +VV+
Sbjct 300 LGWVLPGAAVLPLTPRRGVEEVVD 323
>gi|331694589|ref|YP_004330828.1| nitroreductase [Pseudonocardia dioxanivorans CB1190]
gi|326949278|gb|AEA22975.1| nitroreductase [Pseudonocardia dioxanivorans CB1190]
Length=325
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/328 (46%), Positives = 194/328 (60%), Gaps = 16/328 (4%)
Query 7 DAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCGVA 66
DA TVR + LA APS+HN+QPWRW V P SL L + L+ TDPDGR+L++SCG A
Sbjct 6 DAATVRAAVGLACMAPSVHNSQPWRWLVGPASLHLHADLGRWLQVTDPDGRDLVMSCGAA 65
Query 67 LHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQP-LVPD-QADVALAAAIPRRRTDRR 124
LHH VAL + G A V+R P+P D HLA + ++ PD + D+ LA+AIP RR+DRR
Sbjct 66 LHHLRVALVAAGRHAVVHRLPNPADGDHLAAVELRADGRPDTETDIGLASAIPVRRSDRR 125
Query 125 AYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEE----YLREL 180
+S WPVP + + A AA G L V D A V +A+ D ++ Y EL
Sbjct 126 RFSTWPVPPAFLDELVAAAAANGARLTPVEPAD--HAAVLRAIRDAGLAQQSLPGYSTEL 183
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPS--DVLPADDGAAILALGTE 238
+WSG GVPA N P+DP A P PG+ + DV DDGA +L + T
Sbjct 184 AMWSGGLVGPDGVPAANL-PADPGAAGPAVRHFTPGVLEERYPDV---DDGAQLLIIATS 239
Query 239 TDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLR 298
+DD L+ LRAGEA S V L A GLA CP++ P+E+ +TR A+R +V G PQ++LR
Sbjct 240 SDDPLSWLRAGEALSAVSLRAVVQGLASCPLSTPMEVTRTRLALRDDVLGGTSVPQLVLR 299
Query 299 VGWAPINADPLPPTPRRELSQVVEWPEE 326
VGW P + LP TPRR +S V+ E+
Sbjct 300 VGWPP--SGELPRTPRRPVSDVLTTVED 325
>gi|317507618|ref|ZP_07965331.1| hypothetical protein HMPREF9336_01703 [Segniliparus rugosus ATCC
BAA-974]
gi|316254095|gb|EFV13452.1| hypothetical protein HMPREF9336_01703 [Segniliparus rugosus ATCC
BAA-974]
Length=342
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 145/331 (44%), Positives = 186/331 (57%), Gaps = 12/331 (3%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M+ FPD TV V++LA RAPS+HN+QPW WRV S+ L++ P QLR DPDGREL+
Sbjct 1 MSRTFPDDRTVAAVISLADRAPSLHNSQPWLWRVGRESVHLYADPARQLREADPDGRELL 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
+SCG ALHH +A A+LGW+A+ R P+P + HLA I + P +V L AAI R
Sbjct 61 ISCGAALHHARLAFAALGWRAETRRLPNPAEPAHLAAIELHRHDPSATEVMLCAAISARN 120
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDR--MKAIVAQAVLDHVTDEEYLR 178
+DRR S VPG + M AA G +L ++ R + +A H EY R
Sbjct 121 SDRRRLSPRSVPGHVVEAMERAAAAEGALLAAADSIARRTLSTAAVEAAGHHSASLEYRR 180
Query 179 ELTIWSGRYGSVAGVPARNEPP--SDPSAPIPGRLFAGPGLSQP------SDVLPADDGA 230
E+ W+G++ S GV A + PP S P+ +P R F PGL Q SD G
Sbjct 181 EIERWTGKHLSSDGVLAVSTPPVASGPN-DMPDRRFTAPGLWQSAAADHCSDDEIRGSGD 239
Query 231 AILALGTETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAG 290
IL L T DDR A+LRAGEA S LL A GL+ C +TE LEI TR +R EV G
Sbjct 240 VILTLSTALDDRAAQLRAGEATSAALLAAAQRGLSTCLLTEALEIPATRSRIRREVTGQ- 298
Query 291 GYPQMLLRVGWAPINADPLPPTPRRELSQVV 321
YPQ ++RVGW P + L PRR +V+
Sbjct 299 RYPQAIIRVGWPPEDGSALASAPRRAAHEVL 329
>gi|331696254|ref|YP_004332493.1| nitroreductase [Pseudonocardia dioxanivorans CB1190]
gi|326950943|gb|AEA24640.1| nitroreductase [Pseudonocardia dioxanivorans CB1190]
Length=324
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/323 (43%), Positives = 179/323 (56%), Gaps = 10/323 (3%)
Query 4 HFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSC 63
H D T+ + AVRAPSIHNTQPWRW V P +EL + P +L +TDPDGR++++SC
Sbjct 6 HGIDISTLEEAVRRAVRAPSIHNTQPWRWHVAPGRVELHADPGRRLIATDPDGRDMLVSC 65
Query 64 GVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRRTDR 123
G ALHH VALA +G R PDP+ R HLAT+ V AD +L A I RRR DR
Sbjct 66 GAALHHLRVALAGVGANTATTRLPDPERRDHLATVHVVDGHAPSADASLYAQIDRRRCDR 125
Query 124 RAYSCWPVP---GGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
R Y P GG ARA ++ + A +R+ + A LD Y+ EL
Sbjct 126 RPYDAGASPTLVGG--LTRRARALGADIVAVEGPARERILRAIDDAALDQPHRPGYVGEL 183
Query 181 TIWSGRY-GSVAGVPARNEPPSDPSAPIPGR-LFAGPGLSQPSDVLPADDGAAILALGTE 238
+W+ RY G+ GVP + P P P R F L Q + P D + + T
Sbjct 184 VVWTHRYAGARDGVPRTSIPADGPGTGSPHRNRFPSGTLPQRASFGP--DAGTLFVVTTP 241
Query 239 TDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLR 298
DDR+ RLRAGEA S VLL A A G A CP+++ LE++ TR V+ G G+PQ+LLR
Sbjct 242 GDDRIDRLRAGEAVSAVLLAAAAAGYASCPLSQALELSSTRSRVQYTA-GTTGHPQLLLR 300
Query 299 VGWAPINADPLPPTPRRELSQVV 321
+G P + P+P TPRR LS V+
Sbjct 301 IGRPPAHGGPVPETPRRSLSAVL 323
>gi|326332436|ref|ZP_08198712.1| hypothetical protein NBCG_03882 [Nocardioidaceae bacterium Broad-1]
gi|325949749|gb|EGD41813.1| hypothetical protein NBCG_03882 [Nocardioidaceae bacterium Broad-1]
Length=327
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/327 (38%), Positives = 170/327 (52%), Gaps = 15/327 (4%)
Query 3 THFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILS 62
+ PD T+R +L LA RAPS+HNTQPW W V L L + P +L DP+ R+L++S
Sbjct 2 SRLPDEPTLRAILGLASRAPSVHNTQPWAWAVRDQMLLLRADPHRKLLHADPNERDLVMS 61
Query 63 CGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRRTD 122
CG ALH VVA A GW V+R P+ LA + P PD AD+ AAI +R TD
Sbjct 62 CGAALHELVVAAAGTGWACTVHRTPEGGRTDLLAVVTFTPREPDTADLGRLAAIEQRHTD 121
Query 123 RRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAV----LDHVTDEEYLR 178
RR S WPVP + +A V+ V D ++ +V A+ TDE YL
Sbjct 122 RRLVSSWPVPRERLDHLAELVRDHAVVATTVP--DHLRPVVLSALETARAHQSTDEAYLA 179
Query 179 ELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAI---LAL 235
EL W+ R G+ G+P E + P PG + D D G + + L
Sbjct 180 ELYSWT-RGGTEDGIP---ESSLLAAGSDPASYSRFPGGTLADDY--GDTGGSAEEWVVL 233
Query 236 GTETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQM 295
T +DD L+ LRAGEA + L+ T GLA P T+P+EI TR ++ ++ G PQ+
Sbjct 234 ATASDDPLSWLRAGEALDAIWLSCTTSGLALVPYTQPIEIGSTRRTLQHDLLGDNSCPQV 293
Query 296 LLRVGWAPINADPLPPTPRRELSQVVE 322
L+R+GW + LPPTPRR + ++
Sbjct 294 LVRIGWPQRHQALLPPTPRRAVDDILH 320
>gi|120401196|ref|YP_951025.1| hypothetical protein Mvan_0168 [Mycobacterium vanbaalenii PYR-1]
gi|119954014|gb|ABM11019.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=273
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/323 (40%), Positives = 165/323 (52%), Gaps = 53/323 (16%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
M T FPD + +VL LA +APS+ NTQPWRW V ++LF+ +L TD D R+++
Sbjct 1 MTTAFPDTAVLESVLDLAAQAPSVRNTQPWRWHVDQRGVQLFADWTRRLGDTDSDRRDVV 60
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRR 120
LSCG LHHC VALA GW +++ R PD LA + ++ P LAAAI RR
Sbjct 61 LSCGAVLHHCAVALADAGWSSRIRRLPDDG---VLAALELEERPPGAGSHELAAAIAHRR 117
Query 121 TDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLREL 180
DRR Y+ +P G I L+ RA R GV L A+V + D E+
Sbjct 118 ADRRPYTG-SLPAGMIELLMLRAERFGVRL----------AVVPTVRWARIGDAEF---- 162
Query 181 TIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETD 240
+ RYG D S PG D AA+L L T+TD
Sbjct 163 ---ALRYG-------------DSSPGHPG------------------DDAAMLVLATDTD 188
Query 241 DRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVG 300
RLRAGEA S + L ATA+GLA CP+TEPL+ + R A+ EVF +PQ L+R+G
Sbjct 189 TEAMRLRAGEALSDLTLAATALGLASCPLTEPLKDERNRLALACEVFDGEAHPQALIRLG 248
Query 301 WAPINADPLPPTPRRELSQVVEW 323
P DPLPP RR +++ +
Sbjct 249 -RPGAGDPLPPVRRRPVAETTTF 270
>gi|134099020|ref|YP_001104681.1| hypothetical protein SACE_2458 [Saccharopolyspora erythraea NRRL
2338]
gi|291006883|ref|ZP_06564856.1| hypothetical protein SeryN2_20378 [Saccharopolyspora erythraea
NRRL 2338]
gi|133911643|emb|CAM01756.1| hypothetical protein SACE_2458 [Saccharopolyspora erythraea NRRL
2338]
Length=322
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/319 (41%), Positives = 170/319 (54%), Gaps = 10/319 (3%)
Query 11 VRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCGVALHHC 70
+R+ L LA RAPS+HN+QPWRW++ S++L++ L DP GRE+++SCG LHH
Sbjct 1 MRSALALACRAPSVHNSQPWRWKLAEHSVQLYADRSRLLPVLDPLGREMVISCGAGLHHA 60
Query 71 VVALASLGWQAKVNRFPDPKDRCHLATIGVQPL--VPDQADVALAAAIPRRRTDRRAYSC 128
VA A+ GW+ V+R P+P HLA+I L V D+A V LAA R TDRR +
Sbjct 61 RVAFAAEGWRPIVHRVPNPAQPDHLASIEFSRLSEVDDEA-VRLAAVAVDRHTDRRPFLP 119
Query 129 WPVPGGDIALMAARAARGG---VMLRQVSALDRMKAIVAQAVLDHVTDEEYLRELTIWSG 185
PVP + + A G V++ S ++ + A EY REL WSG
Sbjct 120 DPVPPDLLESLRVFAHSAGARLVLVSDESTRREVELAIQHAGSVERARPEYRRELAEWSG 179
Query 186 RYGSVAGVPARNEPPSDPS-APIPGRLFAGPGLSQ-PSDVLPADDGAAILALGTETDDRL 243
+ GVPAR+ P P + R F + P VL DDGA + L T D
Sbjct 180 THVLAEGVPARSLPERSPYPRGMAERDFGEVAEGELPVPVL--DDGAVLAVLATGGDTVS 237
Query 244 ARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVGWAP 303
L AGEA S VLL AT GLA CP+++ E+A+ RD V +V G G PQ+++RVGW
Sbjct 238 DWLGAGEALSAVLLAATREGLATCPLSQVSEVAEARDQVCRQVLGGAGVPQLVVRVGWPV 297
Query 304 INADPLPPTPRRELSQVVE 322
P T RR LS+ VE
Sbjct 298 TGEFPAVHTHRRPLSESVE 316
>gi|302867182|ref|YP_003835819.1| nitroreductase [Micromonospora aurantiaca ATCC 27029]
gi|302570041|gb|ADL46243.1| nitroreductase [Micromonospora aurantiaca ATCC 27029]
Length=331
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/311 (43%), Positives = 171/311 (55%), Gaps = 12/311 (3%)
Query 18 AVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCGVALHHCVVALASL 77
++ APS+ NTQPWRWRV +LEL + D QL TDPDGR L+LSCG ALHH V+L ++
Sbjct 24 SLHAPSVFNTQPWRWRVTGDALELRADADRQLAHTDPDGRLLMLSCGAALHHARVSLTAV 83
Query 78 GWQAKVNRFPDPKDRCHLATIGVQPLVPDQADV---ALAAAIPRRRTDRRAYSCWPVPGG 134
GW V R PDP D LA V+ P DV L AIPRRRTDRRAY PVP
Sbjct 84 GWAVTVERLPDPGDPSLLAR--VRTTGPADLDVPAGRLVDAIPRRRTDRRAYGDRPVPEA 141
Query 135 DIALMAARAARGGVMLRQV--SALDRMKAIVAQAVLDHVTDEEYLRELTIWSGR-YGSVA 191
+A + G L V + + +A + D Y EL W+ R GS
Sbjct 142 VLARLGDAVEAEGAHLHVVRPDQMPMLAVSTGRAADAELADPAYREELHRWTHRPEGSGD 201
Query 192 GVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETDDRLARLRAGEA 251
GVPA P +P R +A G + S D GAA L L E+D+ A LR GEA
Sbjct 202 GVPAATAVRPSPRR-VPLRDYAPGGAAGLSAGADFDRGAAYLILFGESDEPAAWLRGGEA 260
Query 252 ASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVGWAPINADPLPP 311
S +LLTATA GLA P+++ +E+A R +R ++ G P +++RVGW P +A+ LPP
Sbjct 261 LSALLLTATAEGLASAPLSDAVELAWPRRMMR-DLLAGIGDPYLVVRVGWGP-DAE-LPP 317
Query 312 TPRRELSQVVE 322
PRR + V+E
Sbjct 318 APRRAPADVIE 328
>gi|315506409|ref|YP_004085296.1| nitroreductase [Micromonospora sp. L5]
gi|315413028|gb|ADU11145.1| nitroreductase [Micromonospora sp. L5]
Length=334
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/311 (43%), Positives = 171/311 (55%), Gaps = 12/311 (3%)
Query 18 AVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCGVALHHCVVALASL 77
++ APS+ NTQPWRWRV +LEL + D QL TDPDGR L+LSCG ALHH V+L ++
Sbjct 24 SLHAPSVFNTQPWRWRVTGDALELRADADRQLAHTDPDGRLLMLSCGAALHHARVSLTAV 83
Query 78 GWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVA---LAAAIPRRRTDRRAYSCWPVPGG 134
GW V R PDP D LA V+ P DV L AIPRRRTDRRAY PVP
Sbjct 84 GWAVTVERLPDPGDPSLLAR--VRTTGPADLDVPAGRLVDAIPRRRTDRRAYGDRPVPEA 141
Query 135 DIALMAARAARGGVMLRQV--SALDRMKAIVAQAVLDHVTDEEYLRELTIWSGR-YGSVA 191
+A + G L V + + +A + D Y EL W+ R GS
Sbjct 142 VLARLGDAVEAEGAHLHVVRPDQMPMLAVSTGRAADAELADPAYREELHRWTHRPEGSGD 201
Query 192 GVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETDDRLARLRAGEA 251
GVPA P +P R +A G + S D GAA L L E+D+ A LR GEA
Sbjct 202 GVPAATAVRPSPRR-VPLRDYAPGGAAGLSAGADFDRGAAYLILFGESDEPAAWLRGGEA 260
Query 252 ASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVGWAPINADPLPP 311
S +LLTATA GLA P+++ +E+A R +R ++ G P +++RVGW P +A+ LPP
Sbjct 261 LSALLLTATAEGLASAPLSDAVELAWPRRMMR-DLLAGIGDPYLVVRVGWGP-DAE-LPP 317
Query 312 TPRRELSQVVE 322
PRR + V+E
Sbjct 318 APRRAPADVIE 328
>gi|119868659|ref|YP_938611.1| hypothetical protein Mkms_2624 [Mycobacterium sp. KMS]
gi|119694748|gb|ABL91821.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=297
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/319 (39%), Positives = 156/319 (49%), Gaps = 49/319 (15%)
Query 5 FPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCG 64
PD T+ VL A APS N QPW WRV P ++LF+ +L D R+++LSCG
Sbjct 26 LPDVATLERVLDAAAHAPSAQNAQPWSWRVTPGGVDLFADWSRRLGDGGQDRRDVLLSCG 85
Query 65 VALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRRTDRR 124
LHHC VAL + GW ++ RFP D HLA I + P D+ LA AIPRRR DRR
Sbjct 86 AVLHHCAVALGADGWAPRIRRFPARDDTDHLALIELIEAPPSAGDIELAEAIPRRRADRR 145
Query 125 AYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLRELTIWS 184
Y P+P G + L+ RA R GV V ++ VL
Sbjct 146 PYRAQPLPEGSLELLHVRAERDGVRFGVVPRTGWGRSSDGDVVL---------------- 189
Query 185 GRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETDDRLA 244
+YGS PA D AA+L L T+TD LA
Sbjct 190 -QYGSPTAAPA--------------------------------DEAALLVLATDTDGDLA 216
Query 245 RLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVGWAPI 304
LRAGE S VLL AT+MGLA CP+T PL ++R ++ EVF YPQ+L+R+GWAP
Sbjct 217 HLRAGEVMSDVLLVATSMGLASCPLTTPLTDTRSRLSLACEVFDGEAYPQVLIRLGWAPA 276
Query 305 NADPLPPTPRRELSQVVEW 323
+ LP RR +S+ W
Sbjct 277 DGTALPVLERRSVSETTTW 295
>gi|108799546|ref|YP_639743.1| hypothetical protein Mmcs_2579 [Mycobacterium sp. MCS]
gi|108769965|gb|ABG08687.1| conserved hypothetical protein [Mycobacterium sp. MCS]
Length=279
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/319 (39%), Positives = 156/319 (49%), Gaps = 49/319 (15%)
Query 5 FPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCG 64
PD T+ VL A APS N QPW WRV P ++LF+ +L D R+++LSCG
Sbjct 8 LPDVATLERVLDAAAHAPSAQNAQPWSWRVTPGGVDLFADWSRRLGDGGQDRRDVLLSCG 67
Query 65 VALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRRTDRR 124
LHHC VAL + GW ++ RFP D HLA I + P D+ LA AIPRRR DRR
Sbjct 68 AVLHHCAVALGADGWAPRIRRFPARDDTDHLALIELIEAPPSAGDIELAEAIPRRRADRR 127
Query 125 AYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLRELTIWS 184
Y P+P G + L+ RA R GV V ++ VL
Sbjct 128 PYRAQPLPEGSLELLHVRAERDGVRFGVVPRTGWGRSSDGDVVL---------------- 171
Query 185 GRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETDDRLA 244
+YGS PA D AA+L L T+TD LA
Sbjct 172 -QYGSPTAAPA--------------------------------DEAALLVLATDTDGDLA 198
Query 245 RLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVGWAPI 304
LRAGE S VLL AT+MGLA CP+T PL ++R ++ EVF YPQ+L+R+GWAP
Sbjct 199 HLRAGEVMSDVLLVATSMGLASCPLTTPLTDTRSRLSLACEVFDGEAYPQVLIRLGWAPA 258
Query 305 NADPLPPTPRRELSQVVEW 323
+ LP RR +S+ W
Sbjct 259 DGTALPVLERRSVSETTTW 277
>gi|325001930|ref|ZP_08123042.1| hypothetical protein PseP1_24351 [Pseudonocardia sp. P1]
Length=482
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/318 (42%), Positives = 174/318 (55%), Gaps = 10/318 (3%)
Query 11 VRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCGVALHHC 70
VR + A+ APS+HN+QPWRWR+ +EL+ PD +L TDPDGR+L++SCG AL H
Sbjct 163 VRQAVATALMAPSVHNSQPWRWRIGADRIELYGDPDRRLPFTDPDGRDLLVSCGSALSHL 222
Query 71 VVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPD---QADVALAAAIPRRRTDRRAYS 127
VALA+ + RFP DR HLAT+ + PD +AD LA AI RR+DRR ++
Sbjct 223 HVALAAADVGHETLRFPT-DDRHHLATVRLTGEPPDRAARADRVLAPAIAVRRSDRRPFT 281
Query 128 CWPVPGGDIALMAARAARGGVMLRQVS---ALDRMKAIVAQAVLDHVTDEEYLRELTIWS 184
+ A + RAAR GV L V+ A +++ + +A D EL +W+
Sbjct 282 DGELAPHTRAALGLRAARYGVALHAVTGTAAREQLAELEREAARDARRRPGQAAELLVWT 341
Query 185 GRY-GSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETDDRL 243
RY GS GV A + P P S P D L A D A IL L T DD
Sbjct 342 HRYAGSRDGVRASSVPAGTLRTAGDDLAVRFPPGSLPVDPL-AHDRATILVLSTPADDDE 400
Query 244 ARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVGWAP 303
ARL AGEA +LL AT GLA CP+T LE TR A+ + V + Q+L+R+G AP
Sbjct 401 ARLAAGEAGGALLLAATRAGLATCPLTRILETRATRAALASRVLRTPDHAQLLIRIGRAP 460
Query 304 INADPLPPTPRRELSQVV 321
+ + LP TPRR LS V+
Sbjct 461 DDRE-LPATPRRRLSDVL 477
>gi|145594126|ref|YP_001158423.1| hypothetical protein Strop_1579 [Salinispora tropica CNB-440]
gi|145303463|gb|ABP54045.1| hypothetical protein Strop_1579 [Salinispora tropica CNB-440]
Length=382
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/307 (44%), Positives = 171/307 (56%), Gaps = 13/307 (4%)
Query 22 PSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCGVALHHCVVALASLGWQA 81
PS+HNTQPWRWRV P +LEL D QL +TDP+GR LILSCG ALHH VALA+ GWQA
Sbjct 76 PSVHNTQPWRWRVLPDTLELRVVRDRQLTATDPEGRLLILSCGAALHHARVALAAEGWQA 135
Query 82 KVNRFPDPKDRCHLATI-GVQPLVPDQADVALAAAIPRRRTDRRAYSCWPVPGGDIALMA 140
V R PDP D LA + G+ + D + L + R TDRR PV + +
Sbjct 136 VVERIPDPGDEDLLARLTGLTRVGADPEAMHLVQCMRIRHTDRRPVGDEPVTDSALTEIT 195
Query 141 ARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEE-YLR-ELTIWSGRYGSVAGVPARNE 198
A GV L+Q+ ++ A + D V E+ LR EL W+ R V G+PA
Sbjct 196 EAATAEGVRLQQLDRDQVLQLATAASQADTVESEDPQLRTELAYWTSRADDV-GLPAAVL 254
Query 199 PPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILAL--GTETDDRLARLRAGEAASIVL 256
P S P +PGR F G + P V P D AA AL G E D+ + LRAGEA S
Sbjct 255 PESPPQTTVPGRDFGRAG-TLP--VGPGHDQAAGYALLYGDE-DEPITWLRAGEALSAGW 310
Query 257 LTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVGWA-PINADPLPPTPRR 315
LTAT +G++ P++ +E+ TR +R V GYP ++LR+G A P +A P P TPR
Sbjct 311 LTATRLGVSMVPLSGVIEVPSTRAELRG-VLAGMGYPYLVLRLGRADPTHAGP-PHTPRL 368
Query 316 ELSQVVE 322
+ QVV+
Sbjct 369 AMEQVVD 375
>gi|119715233|ref|YP_922198.1| hypothetical protein Noca_0990 [Nocardioides sp. JS614]
gi|119535894|gb|ABL80511.1| conserved hypothetical protein [Nocardioides sp. JS614]
Length=342
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/325 (38%), Positives = 169/325 (52%), Gaps = 17/325 (5%)
Query 6 PDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCGV 65
PD V A+RAPSIHNTQPWRWR ++L++ QL DPDGR L +SCG
Sbjct 19 PDTTAGLRVAEAALRAPSIHNTQPWRWRASAARVDLYADRARQLAVADPDGRNLTISCGA 78
Query 66 ALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRRTDRRA 125
ALH VA + GW A++ R PDP D LAT+ ++P V A+ RRTDRR
Sbjct 79 ALHQATVAARAHGWSAEITRLPDPGDPDLLATLHLRPGRQLYEAVQDLQALQERRTDRRR 138
Query 126 YSCWPVPGGDIALMAARAARGGVMLRQVSAL-DRMKA--IVAQAVLDHVTDEEYLRELTI 182
++ WPVP +A +AA V + V+A DR++ +V++A D E
Sbjct 139 FTSWPVPPERLARLAASVGVDQVRVVPVTAAPDRVRVELLVSRATTLVKADRRLADEQRS 198
Query 183 WSGRYGSVAGVPAR------NEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALG 236
W R V G+P+ +PPS S R P + DG +L +
Sbjct 199 WLDR-SEVDGIPSDLLPGPGAQPPSRSS-----RFVEEPAEGDVRGAIETSDG--LLMIA 250
Query 237 TETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQML 296
T+TDD A LR GEA + L A GL+ P+++ +E+ +TR A+ E+ G +PQ+L
Sbjct 251 TDTDDAEAWLRTGEALGQLWLHAMNDGLSVVPLSQVIEVDETRTALHHELLGGLLHPQLL 310
Query 297 LRVGWAPINADPLPPTPRRELSQVV 321
+R+GW I PLP TPRR L+ V+
Sbjct 311 VRIGWQEIARSPLPRTPRRPLADVL 335
>gi|333921514|ref|YP_004495095.1| hypothetical protein AS9A_3857 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483735|gb|AEF42295.1| hypothetical protein AS9A_3857 [Amycolicicoccus subflavus DQS3-9A1]
Length=331
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/310 (38%), Positives = 162/310 (53%), Gaps = 19/310 (6%)
Query 22 PSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCGVALHHCVVALASLGWQA 81
PS+HNTQPW W + SLELF+ P+ + DP GR++++SCG ALHH VAL +G++A
Sbjct 23 PSVHNTQPWLWELRDGSLELFADPERMVNVADPSGRQMVISCGAALHHAKVALTGMGYEA 82
Query 82 KVNRFPDPKDRCHLATIGVQPL-VPDQADVALAAAIPRRRTDRRAYSCWPVPGGDIALMA 140
+ R PDP D H+ATI ++P+ PD+ D L A+ RR+DRR P+ ++ ++
Sbjct 83 AIVRMPDPSDAFHVATITIKPVTFPDERDRVLGEAVQIRRSDRRPLG--PLADNEVHILK 140
Query 141 ARAARGGVMLRQVSALDR-----MKAIVAQAVLDHVTDEEYLRELTIWSGRYGSVAGVPA 195
L ++ LD +K AV + DE Y REL WSG Y GVP
Sbjct 141 TAFHDD---LVSITVLDSDGAHLVKEASELAVRERAADEPYHRELNWWSGHYRLFDGVPR 197
Query 196 RNEPPSDPSAPIP-GRLFAGPGLSQPSDVLPADDGAAILALGTETDDRLARLRAGEAASI 254
+ P + +P GR F G +P +P D A++L + T D LR GEA S
Sbjct 198 SSLPSLEKRGAVPSGREFPA-GTLKPQRDMP--DRASLLIMSTSGDSAEDWLRCGEAMSA 254
Query 255 VLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGG---YPQMLLRVGWAPINADPLPP 311
VLL A A L CP+T EI +R VR AG YPQ+++R G P P
Sbjct 255 VLLRAAASRLGACPVTHVTEIEDSRALVRDAAQRAGEVRRYPQVVIRAGERLATGLP-PE 313
Query 312 TPRRELSQVV 321
T RR + +++
Sbjct 314 TGRRPVEEIL 323
>gi|159037164|ref|YP_001536417.1| hypothetical protein Sare_1530 [Salinispora arenicola CNS-205]
gi|157915999|gb|ABV97426.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length=380
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/309 (42%), Positives = 167/309 (55%), Gaps = 17/309 (5%)
Query 22 PSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELILSCGVALHHCVVALASLGWQA 81
PS+HNTQPWRWRV P LEL D QL +TDP+GR L+LSCG ALHH VALA+ GW+A
Sbjct 74 PSVHNTQPWRWRVLPDGLELRVVRDRQLTATDPEGRLLVLSCGAALHHARVALAAEGWRA 133
Query 82 KVNRFPDPKDRCHLATI-GVQPLVPDQADVALAAAIPRRRTDRRAYSCWPVPGGDIALMA 140
V R P D LA G+ + D + L + R TDRR S P+ + +
Sbjct 134 VVERIPHADDPDLLARFTGLTQVGADPEAMHLVQCMRIRHTDRRPVSDEPIADAALDEIT 193
Query 141 ARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEE-YLR-ELTIWSGRYGSVAGVPARNE 198
A GV L+ + ++ A + D V E+ LR EL W+GR G V G+PA
Sbjct 194 EAATADGVRLQLLDRGQVLQLATAASQADTVESEDPQLRAELAYWTGRAGDV-GLPAAVL 252
Query 199 PPSDPSAPIPGRLFAGPGLSQPSDVLPA----DDGAAILALGTETDDRLARLRAGEAASI 254
P S P +PGR F PG LP D A L + D+ + LRAGEA S
Sbjct 253 PESPPQTTVPGRDFGRPG------TLPVGSGHDQAAGYALLYGDEDEPVDWLRAGEALSA 306
Query 255 VLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVGWA-PINADPLPPTP 313
LTAT +G++ P++ +E+ TR A+R + G GYP ++LR+G A P +A P P TP
Sbjct 307 GWLTATRLGVSVVPLSGVVEVPGTRAALRGMLAGV-GYPYLVLRMGLADPTHAGP-PHTP 364
Query 314 RRELSQVVE 322
R + QVV+
Sbjct 365 RLGVDQVVD 373
>gi|111017049|ref|YP_700021.1| hypothetical protein RHA1_ro00027 [Rhodococcus jostii RHA1]
gi|110816579|gb|ABG91863.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=338
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/329 (39%), Positives = 163/329 (50%), Gaps = 12/329 (3%)
Query 1 MNTH----FPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDG 56
MNT PD TV + + LA RAPS+HN+QPWRW V T+L L+S PD L +TD G
Sbjct 1 MNTRAVPTVPDRRTVESAVALACRAPSLHNSQPWRW-VMGTALRLYSDPDRLLPATDGFG 59
Query 57 RELILSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPL-VPDQADVALAAA 115
R++++SCG AL+H A + W+ + R P DR L+TI P P +A A
Sbjct 60 RQMVISCGAALNHLEYAFTANHWRLVIERLPHSSDRQLLSTINFIPAPAPTDFVARMAVA 119
Query 116 IPRRRTDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDR---MKAIVAQAVLDHVT 172
I RRRT+R P + + A GV L + R +A L H
Sbjct 120 IGRRRTERLPMDPPPAWADTLEQLVRITAGTGVELEDLGQRSRPALEEASRRMTGLRH-D 178
Query 173 DEEYLRELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAI 232
D Y EL WSGR GVP + P + PG + D P++D AAI
Sbjct 179 DPTYQAELRWWSGRGLFPDGVPEQARPSDRQQHSVHLSREFPPGRASTPDGGPSEDRAAI 238
Query 233 LALGTETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGAGGY 292
L L T D RL LR+GE S VLL T GL CP+T E A TR +R E+ G
Sbjct 239 LLLSTSADSRLDWLRSGEVLSAVLLACTDRGLGTCPVTHLTERAVTRTLLR-ELSSGEGM 297
Query 293 PQMLLRVGWAPINADPLPPTPRRELSQVV 321
PQ+L+RVG +P TPRR LS+V+
Sbjct 298 PQVLIRVGAGTGVGEP-STTPRRPLSEVL 325
>gi|111017053|ref|YP_700025.1| hypothetical protein RHA1_ro00031 [Rhodococcus jostii RHA1]
gi|110816583|gb|ABG91867.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=337
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/332 (36%), Positives = 165/332 (50%), Gaps = 23/332 (6%)
Query 1 MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRELI 60
+++ PD VR + LA RAPS+HN+QPW+W L+L++ L STDP GR+L+
Sbjct 9 VDSTIPDENVVRIAVDLACRAPSVHNSQPWQWTYADGQLDLYTERGRLLASTDPSGRQLV 68
Query 61 LSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLV-PDQADVALAAAIPRR 119
+SCG AL+H AL L W + R P+ HLATI + P D L AAI R
Sbjct 69 VSCGAALNHLETALTGLKWSVDIRRVPEGPHSGHLATIRFRHDARPQSHDFDLLAAIRHR 128
Query 120 RTDRRAYSCWPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVT------- 172
+DRR P G +++ + R+V + A A+ L T
Sbjct 129 YSDRR-------PFGPVSMKTPLPPALTDVTRRVDVHLTLLAQDARPTLAKATELTAAAR 181
Query 173 --DEEYLRELTIWSGRYGSVAGVPARNEPPSDPSAPIP-GRLFAGPGLSQPSDVLPADDG 229
D Y EL W+G G+PA + ++ + GR F + +D P D
Sbjct 182 KYDSAYQAELHWWAGHSIPQGGIPADSLATAENRDRVDIGRRFPA---GRDNDASPGIDR 238
Query 230 AAILALGTETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAKTRDAVRAEVFGA 289
+ +L L T+TD R A LRAGEA S VLL AT GLA CP+T E+ ++R+ +R E+
Sbjct 239 STVLVLSTDTDGREAWLRAGEALSAVLLEATVGGLATCPLTHMTELRQSREMIR-ELVPD 297
Query 290 GGYPQMLLRVGWAPINADPLPPTPRRELSQVV 321
G+PQ L+RVG + P TPRR + V
Sbjct 298 RGFPQALIRVGTTEKKSPPR-QTPRRPVESVF 328
Lambda K H
0.321 0.136 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 592843174656
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40