BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3135
Length=132
Score E
Sequences producing significant alignments: (Bits) Value
gi|57117064|ref|YP_177934.1| PPE family protein [Mycobacterium t... 261 3e-68
gi|148824329|ref|YP_001289083.1| PPE family protein [Mycobacteri... 260 5e-68
gi|306785997|ref|ZP_07424319.1| putative PPE family protein [Myc... 235 1e-60
gi|289448814|ref|ZP_06438558.1| PPE family protein [Mycobacteriu... 155 1e-36
gi|121639018|ref|YP_979242.1| PPE family protein [Mycobacterium ... 155 2e-36
gi|224991510|ref|YP_002646199.1| PPE family protein [Mycobacteri... 155 2e-36
gi|31794311|ref|NP_856804.1| PPE family protein [Mycobacterium b... 155 2e-36
gi|289575846|ref|ZP_06456073.1| PPE family protein [Mycobacteriu... 155 2e-36
gi|340628111|ref|YP_004746563.1| ppe family protein [Mycobacteri... 155 2e-36
gi|289759264|ref|ZP_06518642.1| PPE family protein [Mycobacteriu... 155 2e-36
gi|240168615|ref|ZP_04747274.1| PPE family protein [Mycobacteriu... 147 5e-34
gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [My... 141 3e-32
gi|183983449|ref|YP_001851740.1| PPE family protein, PPE51_3 [My... 129 1e-28
gi|183981529|ref|YP_001849820.1| PPE family protein, PPE51_1 [My... 123 1e-26
gi|118617918|ref|YP_906250.1| PPE family protein [Mycobacterium ... 121 3e-26
gi|118618187|ref|YP_906519.1| PPE family protein [Mycobacterium ... 121 4e-26
gi|298527010|ref|ZP_07014419.1| ppe family protein [Mycobacteriu... 120 6e-26
gi|289755661|ref|ZP_06515039.1| PPE family protein [Mycobacteriu... 120 6e-26
gi|183981528|ref|YP_001849819.1| PPE family protein, PPE51 [Myco... 119 2e-25
gi|306782177|ref|ZP_07420514.1| PPE family protein [Mycobacteriu... 117 6e-25
gi|15842710|ref|NP_337747.1| PPE family protein [Mycobacterium t... 117 6e-25
gi|167970194|ref|ZP_02552471.1| PPE family protein [Mycobacteriu... 117 7e-25
gi|323717804|gb|EGB27001.1| hypothetical protein TMMG_00020 [Myc... 116 9e-25
gi|31794708|ref|NP_857201.1| PPE family protein [Mycobacterium b... 116 1e-24
gi|308232493|ref|ZP_07416221.2| PPE family protein [Mycobacteriu... 116 1e-24
gi|289572184|ref|ZP_06452411.1| PPE family protein [Mycobacteriu... 116 1e-24
gi|289440961|ref|ZP_06430705.1| PPE family protein [Mycobacteriu... 116 1e-24
gi|118617919|ref|YP_906251.1| PPE family protein [Mycobacterium ... 115 1e-24
gi|289445124|ref|ZP_06434868.1| PPE family protein [Mycobacteriu... 115 2e-24
gi|41409283|ref|NP_962119.1| hypothetical protein MAP3185 [Mycob... 115 2e-24
gi|118466535|ref|YP_883168.1| PPE family protein [Mycobacterium ... 115 2e-24
gi|339633530|ref|YP_004725172.1| PPE family protein [Mycobacteri... 115 3e-24
gi|212596159|gb|ACJ35556.1| PPE33 [Mycobacterium avium subsp. av... 114 5e-24
gi|340628112|ref|YP_004746564.1| PPE family protein [Mycobacteri... 112 3e-23
gi|342861296|ref|ZP_08717944.1| PPE family protein [Mycobacteriu... 111 5e-23
gi|118466030|ref|YP_881217.1| PPE family protein [Mycobacterium ... 110 7e-23
gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacteriu... 110 7e-23
gi|212596672|gb|ACJ35597.1| PPE33 [Mycobacterium intracellulare ... 110 8e-23
gi|212596661|gb|ACJ35596.1| PPE32 [Mycobacterium intracellulare ... 109 2e-22
gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacteri... 108 2e-22
gi|336458154|gb|EGO37137.1| PPE-repeat containing protein [Mycob... 108 3e-22
gi|289574463|ref|ZP_06454690.1| PPE family protein [Mycobacteriu... 107 7e-22
gi|240168614|ref|ZP_04747273.1| PPE family protein, PPE51_2 [Myc... 105 2e-21
gi|306972073|ref|ZP_07484734.1| putative PPE family protein [Myc... 104 5e-21
gi|323719699|gb|EGB28819.1| PPE family protein [Mycobacterium tu... 104 5e-21
gi|308379036|ref|ZP_07484777.2| putative PPE family protein [Myc... 104 5e-21
gi|323719718|gb|EGB28837.1| PPE family protein [Mycobacterium tu... 104 5e-21
gi|15841259|ref|NP_336296.1| PPE family protein [Mycobacterium t... 103 6e-21
gi|31792978|ref|NP_855471.1| PPE family protein [Mycobacterium b... 103 6e-21
gi|57116912|ref|YP_177836.1| PPE family protein [Mycobacterium t... 103 7e-21
>gi|57117064|ref|YP_177934.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148662989|ref|YP_001284512.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|167970195|ref|ZP_02552472.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
31 more sequence titles
Length=132
Score = 261 bits (666), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/132 (100%), Positives = 132/132 (100%), Gaps = 0/132 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE
Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
Query 121 TASASNTAGTPP 132
TASASNTAGTPP
Sbjct 121 TASASNTAGTPP 132
>gi|148824329|ref|YP_001289083.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|308375997|ref|ZP_07445788.2| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308377230|ref|ZP_07441599.2| PPE family protein [Mycobacterium tuberculosis SUMu008]
gi|308378200|ref|ZP_07481882.2| PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|148722856|gb|ABR07481.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|308344454|gb|EFP33305.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308348450|gb|EFP37301.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
gi|308353080|gb|EFP41931.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
Length=185
Score = 260 bits (664), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 132/132 (100%), Positives = 132/132 (100%), Gaps = 0/132 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct 54 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 113
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE
Sbjct 114 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 173
Query 121 TASASNTAGTPP 132
TASASNTAGTPP
Sbjct 174 TASASNTAGTPP 185
>gi|306785997|ref|ZP_07424319.1| putative PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308329354|gb|EFP18205.1| putative PPE family protein [Mycobacterium tuberculosis SUMu003]
Length=121
Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 12 SARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGPASTSMLAMSAP 71
SARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGPASTSMLAMSAP
Sbjct 1 SARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGPASTSMLAMSAP 60
Query 72 YVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVETASASNTAGTP 131
YVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVETASASNTAGTP
Sbjct 61 YVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVETASASNTAGTP 120
Query 132 P 132
P
Sbjct 121 P 121
>gi|289448814|ref|ZP_06438558.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289421772|gb|EFD18973.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length=387
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI 117
ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT R A+
Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120
Query 118 VVETASASNTA 128
+ NTA
Sbjct 121 IASNLLGQNTA 131
>gi|121639018|ref|YP_979242.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|121494666|emb|CAL73147.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
Length=381
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI 117
ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT R A+
Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120
Query 118 VVETASASNTA 128
+ NTA
Sbjct 121 IASNLLGQNTA 131
>gi|224991510|ref|YP_002646199.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224774625|dbj|BAH27431.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=381
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI 117
ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT R A+
Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120
Query 118 VVETASASNTA 128
+ NTA
Sbjct 121 IASNLLGQNTA 131
>gi|31794311|ref|NP_856804.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31619907|emb|CAD95251.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|341603057|emb|CCC65735.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=381
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI 117
ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT R A+
Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120
Query 118 VVETASASNTA 128
+ NTA
Sbjct 121 IASNLLGQNTA 131
>gi|289575846|ref|ZP_06456073.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|339633142|ref|YP_004724784.1| PPE family protein [Mycobacterium africanum GM041182]
gi|289540277|gb|EFD44855.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|339332498|emb|CCC28213.1| PPE family protein [Mycobacterium africanum GM041182]
Length=345
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI 117
ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT R A+
Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120
Query 118 VVETASASNTA 128
+ NTA
Sbjct 121 IASNLLGQNTA 131
>gi|340628111|ref|YP_004746563.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
gi|340006301|emb|CCC45480.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
Length=381
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI 117
ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT R A+
Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120
Query 118 VVETASASNTA 128
+ NTA
Sbjct 121 IASNLLGQNTA 131
>gi|289759264|ref|ZP_06518642.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289714828|gb|EFD78840.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|326902641|gb|EGE49574.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|339295969|gb|AEJ48080.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339299578|gb|AEJ51688.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=262
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI 117
ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT R A+
Sbjct 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL 120
Query 118 VVETASASNTA 128
+ NTA
Sbjct 121 IASNLLGQNTA 131
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/22 (96%), Positives = 22/22 (100%), Gaps = 0/22 (0%)
Query 111 TGIRGAIVVETASASNTAGTPP 132
+GIRGAIVVETASASNTAGTPP
Sbjct 241 SGIRGAIVVETASASNTAGTPP 262
>gi|240168615|ref|ZP_04747274.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=379
Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/114 (73%), Positives = 94/114 (83%), Gaps = 0/114 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MDYAFLPPEINSAR+YSGPGP S+L AA WDA+A EL SAA Y SVI+ LT M+WWGP
Sbjct 1 MDYAFLPPEINSARIYSGPGPGSLLAAARGWDAVATELTSAAVGYRSVISSLTAMYWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR 114
AS SMLA + P+VEWLE TAAQ K++A Q+RAAAAAFEQAHAMTVPPA+V R
Sbjct 61 ASVSMLATAGPFVEWLETTAAQAKESADQSRAAAAAFEQAHAMTVPPAVVAANR 114
>gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [Mycobacterium marinum M]
gi|183173551|gb|ACC38661.1| PPE family protein, PPE51_2 [Mycobacterium marinum M]
Length=381
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/114 (63%), Positives = 85/114 (75%), Gaps = 0/114 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NS MY+GPG S+L AA SWD LA EL + A+ Y SV++ LT M+W GP
Sbjct 1 MDFAMLPPEVNSGLMYTGPGAGSLLAAANSWDELAIELGTTAQTYESVLSGLTSMYWAGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR 114
AS SM A +APYV WL TA QT+QTATQ RAAA AFEQA+AMTVPP ++ R
Sbjct 61 ASESMAAKAAPYVWWLHSTAEQTQQTATQCRAAAMAFEQAYAMTVPPPVILANR 114
>gi|183983449|ref|YP_001851740.1| PPE family protein, PPE51_3 [Mycobacterium marinum M]
gi|183176775|gb|ACC41885.1| PPE family protein, PPE51_3 [Mycobacterium marinum M]
Length=380
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/110 (69%), Positives = 91/110 (83%), Gaps = 0/110 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
M+YAFLPPE+NSARMYSGPGP S+L AAASWD +A ELAS AE Y SVI+ L+GM+WWGP
Sbjct 1 MNYAFLPPEVNSARMYSGPGPESLLAAAASWDMVAIELASTAEGYRSVISTLSGMYWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALV 110
AS +MLA + P+++WLE T A +TA QA AAAAA+EQA+AMTVPP +V
Sbjct 61 ASAAMLAATGPFIDWLEITGALASETANQATAAAAAYEQAYAMTVPPIVV 110
>gi|183981529|ref|YP_001849820.1| PPE family protein, PPE51_1 [Mycobacterium marinum M]
gi|183174855|gb|ACC39965.1| PPE family protein, PPE51_1 [Mycobacterium marinum M]
Length=381
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/123 (65%), Positives = 96/123 (79%), Gaps = 0/123 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
M+YAFLPPE+NSARMYSGPG S+L AAASWD +A ELASAAE Y SVI+ L+GM+WWGP
Sbjct 1 MNYAFLPPEVNSARMYSGPGSASLLAAAASWDMVAIELASAAEGYRSVISTLSGMYWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS +MLA + P+++WLE T A +TA QA AAAAA+EQA+AMTVPP +V R +V
Sbjct 61 ASAAMLAATGPFIDWLEITGALASETANQAAAAAAAYEQAYAMTVPPIVVAANRALLVAL 120
Query 121 TAS 123
AS
Sbjct 121 VAS 123
>gi|118617918|ref|YP_906250.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118570028|gb|ABL04779.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=381
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/123 (65%), Positives = 95/123 (78%), Gaps = 0/123 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
M+YAFLPPE+NSARMYSGPG S+L AAASWD +A ELASAAE Y SVI+ L+GM+WWGP
Sbjct 1 MNYAFLPPEVNSARMYSGPGSASLLAAAASWDMVAIELASAAEGYRSVISTLSGMYWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS +MLA + P++ WLE T A +TA QA AAAAA+EQA+AMTVPP +V R +V
Sbjct 61 ASAAMLAATGPFIGWLEITGALASETANQAAAAAAAYEQAYAMTVPPIVVAANRALLVAL 120
Query 121 TAS 123
AS
Sbjct 121 VAS 123
>gi|118618187|ref|YP_906519.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118570297|gb|ABL05048.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=381
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/123 (65%), Positives = 95/123 (78%), Gaps = 0/123 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
M+YAFLPPE+NSARMYSGPG S+L AAASWD +A ELASAAE Y SVI+ L+GM+WWGP
Sbjct 1 MNYAFLPPEVNSARMYSGPGSASLLAAAASWDMVAIELASAAEGYRSVISTLSGMYWWGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS +MLA + P++ WLE T A +TA QA AAAAA+EQA+AMTVPP +V R +V
Sbjct 61 ASAAMLAATGPFIGWLEITGALASETANQAAAAAAAYEQAYAMTVPPIVVAANRALLVAL 120
Query 121 TAS 123
AS
Sbjct 121 VAS 123
>gi|298527010|ref|ZP_07014419.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496804|gb|EFI32098.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
Length=405
Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/118 (62%), Positives = 83/118 (71%), Gaps = 1/118 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NS RMYSGPG S L AAA+WD ++AEL SAAE Y SVIA LTG W GP
Sbjct 3 MDFAMLPPEVNSTRMYSGPGAGS-LWAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 61
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV 118
+S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + R ++
Sbjct 62 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 119
>gi|289755661|ref|ZP_06515039.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289696248|gb|EFD63677.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=405
Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/118 (62%), Positives = 83/118 (71%), Gaps = 1/118 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NS RMYSGPG S L AAA+WD ++AEL SAAE Y SVIA LTG W GP
Sbjct 3 MDFAMLPPEVNSTRMYSGPGAGS-LWAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 61
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV 118
+S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + R ++
Sbjct 62 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 119
>gi|183981528|ref|YP_001849819.1| PPE family protein, PPE51 [Mycobacterium marinum M]
gi|183174854|gb|ACC39964.1| PPE family protein, PPE51 [Mycobacterium marinum M]
Length=382
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/123 (63%), Positives = 92/123 (75%), Gaps = 0/123 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD++ LPPE+NSARMY+GPG S+L AAASWDALAAEL + AE GS++ LT + W GP
Sbjct 1 MDFSLLPPEVNSARMYTGPGSGSLLAAAASWDALAAELGTTAETCGSILTGLTDLSWRGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS SM A +APYV WL RTA QT+Q A QAR AA AFEQA+AMTVPP LV R ++V
Sbjct 61 ASESMAASAAPYVGWLYRTAEQTQQAAIQARTAALAFEQAYAMTVPPPLVAANRAQLLVL 120
Query 121 TAS 123
A+
Sbjct 121 IAT 123
>gi|306782177|ref|ZP_07420514.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|306790362|ref|ZP_07428684.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|306794889|ref|ZP_07433191.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308325139|gb|EFP13990.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308333218|gb|EFP22069.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308336675|gb|EFP25526.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
Length=380
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/114 (63%), Positives = 88/114 (78%), Gaps = 0/114 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NSARMY+GPG S+L AA WD+LAAELA+ AE YGSV++ L +HW GP
Sbjct 1 MDFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR 114
A+ SM +APY+ WL TA +T+QTA QARAAA AFEQA+AMT+PP +V R
Sbjct 61 AAESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANR 114
>gi|15842710|ref|NP_337747.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|31794312|ref|NP_856805.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|57117065|ref|YP_177935.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
69 more sequence titles
Length=380
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/114 (63%), Positives = 88/114 (78%), Gaps = 0/114 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NSARMY+GPG S+L AA WD+LAAELA+ AE YGSV++ L +HW GP
Sbjct 1 MDFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR 114
A+ SM +APY+ WL TA +T+QTA QARAAA AFEQA+AMT+PP +V R
Sbjct 61 AAESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANR 114
>gi|167970194|ref|ZP_02552471.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=480
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/114 (63%), Positives = 88/114 (78%), Gaps = 0/114 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NSARMY+GPG S+L AA WD+LAAELA+ AE YGSV++ L +HW GP
Sbjct 1 MDFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR 114
A+ SM +APY+ WL TA +T+QTA QARAAA AFEQA+AMT+PP +V R
Sbjct 61 AAESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANR 114
>gi|323717804|gb|EGB27001.1| hypothetical protein TMMG_00020 [Mycobacterium tuberculosis CDC1551A]
Length=140
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/118 (62%), Positives = 83/118 (71%), Gaps = 0/118 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP
Sbjct 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV 118
+S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + R ++
Sbjct 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120
>gi|31794708|ref|NP_857201.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|57117120|ref|YP_177984.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|121639451|ref|YP_979675.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
50 more sequence titles
Length=406
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/118 (62%), Positives = 83/118 (71%), Gaps = 0/118 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP
Sbjct 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV 118
+S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + R ++
Sbjct 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120
>gi|308232493|ref|ZP_07416221.2| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308369156|ref|ZP_07416751.2| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308371381|ref|ZP_07424759.2| PPE family protein [Mycobacterium tuberculosis SUMu003]
9 more sequence titles
Length=404
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/118 (62%), Positives = 83/118 (71%), Gaps = 0/118 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP
Sbjct 1 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV 118
+S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + R ++
Sbjct 61 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 118
>gi|289572184|ref|ZP_06452411.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289536615|gb|EFD41193.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=406
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/118 (62%), Positives = 83/118 (71%), Gaps = 0/118 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP
Sbjct 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV 118
+S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + R ++
Sbjct 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120
>gi|289440961|ref|ZP_06430705.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289571773|ref|ZP_06452000.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289752245|ref|ZP_06511623.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289413880|gb|EFD11120.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289545527|gb|EFD49175.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289692832|gb|EFD60261.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=406
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/118 (62%), Positives = 83/118 (71%), Gaps = 0/118 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP
Sbjct 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV 118
+S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + R ++
Sbjct 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120
>gi|118617919|ref|YP_906251.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118570029|gb|ABL04780.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=382
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/123 (62%), Positives = 91/123 (74%), Gaps = 0/123 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD++ LPPE+NSARMY+GPG S+L AAASWDALAAEL + AE GS++ LT + W GP
Sbjct 1 MDFSLLPPEVNSARMYTGPGSGSLLAAAASWDALAAELGTTAETCGSILTGLTDLSWRGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS SM A +AP V WL RTA QT+Q A QAR AA AFEQA+AMTVPP LV R ++V
Sbjct 61 ASESMAASAAPCVGWLYRTAEQTQQAAIQARTAALAFEQAYAMTVPPPLVAANRAQLLVL 120
Query 121 TAS 123
A+
Sbjct 121 IAT 123
>gi|289445124|ref|ZP_06434868.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289418082|gb|EFD15283.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length=285
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/118 (62%), Positives = 83/118 (71%), Gaps = 0/118 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y SVIA LTG W GP
Sbjct 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP 62
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV 118
+S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + R ++
Sbjct 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120
>gi|41409283|ref|NP_962119.1| hypothetical protein MAP3185 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398103|gb|AAS05733.1| hypothetical protein MAP_3185 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459363|gb|EGO38306.1| PPE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=362
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/131 (62%), Positives = 95/131 (73%), Gaps = 3/131 (2%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ FLPPE+NSARMY+GPG S+L AA SWD+LAAEL+ A Y SV+A LTG++W GP
Sbjct 1 MDFGFLPPEVNSARMYAGPGSGSLLAAAGSWDSLAAELSITAAVYESVLAGLTGLYWHGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR---GAI 117
AS +M A +APYV WL TA + +QTATQARAAAAA+E AHAMTVPPA V R A+
Sbjct 61 ASRAMAAGAAPYVGWLHTTAERAQQTATQARAAAAAYELAHAMTVPPAAVAANRTQLAAL 120
Query 118 VVETASASNTA 128
V NTA
Sbjct 121 VATNFFGQNTA 131
>gi|118466535|ref|YP_883168.1| PPE family protein [Mycobacterium avium 104]
gi|118167822|gb|ABK68719.1| PPE family protein [Mycobacterium avium 104]
Length=362
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/131 (62%), Positives = 95/131 (73%), Gaps = 3/131 (2%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ FLPPE+NSARMY+GPG S+L AA SWD+LAAEL+ A Y SV+A LTG++W GP
Sbjct 1 MDFGFLPPEVNSARMYAGPGSGSLLAAAGSWDSLAAELSITAAVYESVLAGLTGLYWHGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR---GAI 117
AS +M A +APYV WL TA + +QTATQARAAAAA+E AHAMTVPPA V R A+
Sbjct 61 ASRAMAAGAAPYVGWLHTTAERAQQTATQARAAAAAYELAHAMTVPPAAVAANRTQLAAL 120
Query 118 VVETASASNTA 128
V NTA
Sbjct 121 VATNFFGQNTA 131
>gi|339633530|ref|YP_004725172.1| PPE family protein [Mycobacterium africanum GM041182]
gi|339332886|emb|CCC28613.1| PPE family protein [Mycobacterium africanum GM041182]
Length=406
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/118 (61%), Positives = 83/118 (71%), Gaps = 0/118 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NS RMYSGPG S+ AAA+WD ++AEL SAAE Y S+IA LTG W GP
Sbjct 3 MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSMIASLTGWQWLGP 62
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV 118
+S M A PYVEWL TAAQ +QTATQ AAA FEQA AMTVPP + R ++
Sbjct 63 SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL 120
>gi|212596159|gb|ACJ35556.1| PPE33 [Mycobacterium avium subsp. avium]
Length=362
Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/131 (61%), Positives = 94/131 (72%), Gaps = 3/131 (2%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ FLPPE+NSARMY+GPG S+L AA SWD+LAAEL+ A Y SV+ LTG++W GP
Sbjct 1 MDFGFLPPEVNSARMYAGPGSGSLLAAAGSWDSLAAELSITAAVYESVLGGLTGLYWHGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR---GAI 117
AS +M A +APYV WL TA + +QTATQARAAAAA+E AHAMTVPPA V R A+
Sbjct 61 ASRAMAAGAAPYVGWLHTTAERAQQTATQARAAAAAYELAHAMTVPPAAVAANRTQLAAL 120
Query 118 VVETASASNTA 128
V NTA
Sbjct 121 VATNFFGQNTA 131
>gi|340628112|ref|YP_004746564.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340006302|emb|CCC45481.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=380
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/114 (62%), Positives = 86/114 (76%), Gaps = 0/114 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NSARMY+GPG S+ AA WD+LAAELA+ AE YGSV++ L +HW GP
Sbjct 1 MDFALLPPEVNSARMYTGPGAGSLWAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR 114
A+ SM +A Y+ WL TA +T+QTA QARAAA AFEQA+AMT+PP LV R
Sbjct 61 AAESMAVTAAAYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPLVAANR 114
>gi|342861296|ref|ZP_08717944.1| PPE family protein [Mycobacterium colombiense CECT 3035]
gi|342131196|gb|EGT84477.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=395
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/114 (58%), Positives = 85/114 (75%), Gaps = 0/114 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
+D+A LPPEINSARMYSGPG ML AAA+W+ +AAE+ +AA +YGSV+ L+ W GP
Sbjct 2 LDFAALPPEINSARMYSGPGSGPMLAAAAAWNTMAAEMRAAAASYGSVVTELSSEGWLGP 61
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR 114
+S SMLA +APY+ WL+ TA Q ++ +QA AAA A+E A AMTVPPA+V R
Sbjct 62 SSMSMLAAAAPYLAWLDGTATQAEEVGSQAFAAATAYESAFAMTVPPAVVAANR 115
>gi|118466030|ref|YP_881217.1| PPE family protein [Mycobacterium avium 104]
gi|118167317|gb|ABK68214.1| ppe family protein [Mycobacterium avium 104]
Length=443
Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/114 (61%), Positives = 78/114 (69%), Gaps = 0/114 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ LPPEINS RMYSGPGP S+L AAA W++LAAELA A NY +VIA LT W GP
Sbjct 1 MDFGALPPEINSGRMYSGPGPASLLAAAAGWESLAAELADGAGNYQAVIAGLTNESWLGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR 114
AS SM PYV WL A Q + A QA AAA+AFE A+AMTVPP L+ R
Sbjct 61 ASLSMAGAVMPYVSWLTAVAEQCGRAAAQATAAASAFEAAYAMTVPPPLIAANR 114
>gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacterium colombiense CECT 3035]
gi|342131207|gb|EGT84488.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=417
Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/129 (57%), Positives = 89/129 (69%), Gaps = 2/129 (1%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ LPPEINS RMY+GPG M+ AAA+WD L AEL+SAA Y SVI+ LT W GP
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPMMAAAAAWDGLGAELSSAASGYTSVISELTHAPWVGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS+SML+ PYV WL AAQ ++TA QARAAAAAFE A AMTVPP ++ R +++
Sbjct 61 ASSSMLSAVTPYVSWLSVLAAQAEETAGQARAAAAAFEAAFAMTVPPPVIAANR--VLLA 118
Query 121 TASASNTAG 129
A+N G
Sbjct 119 NLVATNFLG 127
>gi|212596672|gb|ACJ35597.1| PPE33 [Mycobacterium intracellulare ATCC 13950]
Length=390
Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/114 (61%), Positives = 84/114 (74%), Gaps = 0/114 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ FLPPE+NS RMY+GPG S+L AA SWD+LAAEL+ A Y SV++ LTG+ W+GP
Sbjct 1 MDFGFLPPEVNSGRMYAGPGSGSLLAAAGSWDSLAAELSITAAVYESVLSGLTGLSWYGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR 114
AS +M A +APYV WL TA + +QT QARAAAAA+E A AMTVPP V R
Sbjct 61 ASQAMAASAAPYVGWLHATAERAQQTGIQARAAAAAYELARAMTVPPPAVAANR 114
>gi|212596661|gb|ACJ35596.1| PPE32 [Mycobacterium intracellulare ATCC 13950]
Length=391
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/131 (58%), Positives = 94/131 (72%), Gaps = 4/131 (3%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+AF+PPEINSARMY+GPG S+L AA SWDAL+AEL+SAAE Y S ++ L + W GP
Sbjct 1 MDWAFVPPEINSARMYTGPGMGSLLAAAGSWDALSAELSSAAEGYESALSGLD-LQWRGP 59
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR---GAI 117
A+ +M + Y EWL+ TA QT+QTA QAR AAAA+EQA+AMTVPP ++T R A+
Sbjct 60 AAQAMAFAAIRYAEWLQVTAEQTRQTAMQARTAAAAYEQAYAMTVPPPVITANRTLLAAL 119
Query 118 VVETASASNTA 128
V NTA
Sbjct 120 VASNIVGQNTA 130
>gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacterium sp. JDM601]
gi|333486619|gb|AEF36011.1| PPE family protein [Mycobacterium sp. JDM601]
Length=386
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/114 (58%), Positives = 78/114 (69%), Gaps = 0/114 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ LPPEINSAR+Y+G GP S+L AA +W LA EL SAA +YGSVIA LT W GP
Sbjct 1 MDFGALPPEINSARIYAGAGPGSLLAAATAWQELATELNSAAASYGSVIAGLTTGSWAGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR 114
+S +M A + PY+ WL T AQ +Q A Q AA AA+E A A TVPP L+T R
Sbjct 61 SSVAMAAAAGPYITWLNATGAQAQQAAAQVSAAVAAYETAFAATVPPPLITANR 114
>gi|336458154|gb|EGO37137.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=443
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/114 (60%), Positives = 77/114 (68%), Gaps = 0/114 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ LPPEINS RMYSGPGP S+L AAA W++LAAELA A NY +VIA LT W GP
Sbjct 1 MDFGALPPEINSGRMYSGPGPASLLAAAAGWESLAAELADGAGNYQAVIAGLTNESWLGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR 114
AS SM PY WL A Q + A QA AAA+AFE A+AMTVPP L+ R
Sbjct 61 ASLSMAGAVMPYASWLTAVAEQCGRAAAQATAAASAFEAAYAMTVPPPLIAANR 114
>gi|289574463|ref|ZP_06454690.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289538894|gb|EFD43472.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=365
Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/129 (56%), Positives = 84/129 (66%), Gaps = 2/129 (1%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ LPPEINS RMY GPG ML AAA WD +A EL AA Y SVIA LTG W G
Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAPWDGVAVELGLAATGYASVIAELTGAPWVGA 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS SM+A + PYV WL + AA+ +Q QA AAAAA+E A MTVPP ++T R ++V
Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM 118
Query 121 TASASNTAG 129
T A+N G
Sbjct 119 TLIATNFFG 127
>gi|240168614|ref|ZP_04747273.1| PPE family protein, PPE51_2 [Mycobacterium kansasii ATCC 12478]
Length=378
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/114 (65%), Positives = 86/114 (76%), Gaps = 0/114 (0%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+A LPPE+NS R+Y+GPGP S+L AA SWDALA EL + A+ Y SV++ LT + W+GP
Sbjct 1 MDFALLPPEVNSGRIYTGPGPGSLLAAAGSWDALATELDTTAQTYESVVSGLTTLDWYGP 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR 114
AS SM A APYV WL TA QTKQTA QARAAAAAF+QA AMTVPP + R
Sbjct 61 ASESMAAKVAPYVSWLYTTATQTKQTAMQARAAAAAFDQAFAMTVPPPAIAANR 114
>gi|306972073|ref|ZP_07484734.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|308358453|gb|EFP47304.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
Length=179
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/129 (56%), Positives = 85/129 (66%), Gaps = 2/129 (1%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ LPPEINS RMY GPG ML AAA+WD +A EL AA Y SVIA LTG W G
Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS SM+A + PYV WL + AA+ +Q QA AAAAA+E A MTVPP ++T R ++V
Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM 118
Query 121 TASASNTAG 129
T A+N G
Sbjct 119 TLIATNFFG 127
>gi|323719699|gb|EGB28819.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=186
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/129 (56%), Positives = 85/129 (66%), Gaps = 2/129 (1%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ LPPEINS RMY GPG ML AAA+WD +A EL AA Y SVIA LTG W G
Sbjct 14 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 73
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS SM+A + PYV WL + AA+ +Q QA AAAAA+E A MTVPP ++T R ++V
Sbjct 74 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM 131
Query 121 TASASNTAG 129
T A+N G
Sbjct 132 TLIATNFFG 140
>gi|308379036|ref|ZP_07484777.2| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|308358418|gb|EFP47269.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
Length=176
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/129 (56%), Positives = 85/129 (66%), Gaps = 2/129 (1%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ LPPEINS RMY GPG ML AAA+WD +A EL AA Y SVIA LTG W G
Sbjct 14 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 73
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS SM+A + PYV WL + AA+ +Q QA AAAAA+E A MTVPP ++T R ++V
Sbjct 74 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM 131
Query 121 TASASNTAG 129
T A+N G
Sbjct 132 TLIATNFFG 140
>gi|323719718|gb|EGB28837.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=163
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/126 (56%), Positives = 84/126 (67%), Gaps = 2/126 (1%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ LPPEINS RMY GPG ML AAA+WD +A EL AA Y SVIA LTG W G
Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS SM+A + PYV WL + AA+ +Q QA AAAAA+E A MTVPP ++T R ++V
Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM 118
Query 121 TASASN 126
T A+N
Sbjct 119 TLIATN 124
>gi|15841259|ref|NP_336296.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|167967961|ref|ZP_02550238.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|253799169|ref|YP_003032170.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|254550799|ref|ZP_05141246.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|13881486|gb|AAK46110.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|253320672|gb|ACT25275.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328458924|gb|AEB04347.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length=363
Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/129 (56%), Positives = 85/129 (66%), Gaps = 2/129 (1%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ LPPEINS RMY GPG ML AAA+WD +A EL AA Y SVIA LTG W G
Sbjct 14 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 73
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS SM+A + PYV WL + AA+ +Q QA AAAAA+E A MTVPP ++T R ++V
Sbjct 74 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM 131
Query 121 TASASNTAG 129
T A+N G
Sbjct 132 TLIATNFFG 140
>gi|31792978|ref|NP_855471.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31618569|emb|CAD94521.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=350
Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/129 (56%), Positives = 85/129 (66%), Gaps = 2/129 (1%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ LPPEINS RMY GPG ML AAA+WD +A EL AA Y SVIA LTG W G
Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS SM+A + PYV WL + AA+ +Q QA AAAAA+E A MTVPP ++T R ++V
Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM 118
Query 121 TASASNTAG 129
T A+N G
Sbjct 119 TLIATNFFG 127
>gi|57116912|ref|YP_177836.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|121637691|ref|YP_977914.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148661597|ref|YP_001283120.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
47 more sequence titles
Length=350
Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/129 (56%), Positives = 85/129 (66%), Gaps = 2/129 (1%)
Query 1 MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP 60
MD+ LPPEINS RMY GPG ML AAA+WD +A EL AA Y SVIA LTG W G
Sbjct 1 MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA 60
Query 61 ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE 120
AS SM+A + PYV WL + AA+ +Q QA AAAAA+E A MTVPP ++T R ++V
Sbjct 61 ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM 118
Query 121 TASASNTAG 129
T A+N G
Sbjct 119 TLIATNFFG 127
Lambda K H
0.313 0.121 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130990493970
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40