BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3135

Length=132
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|57117064|ref|YP_177934.1|  PPE family protein [Mycobacterium t...   261    3e-68
gi|148824329|ref|YP_001289083.1|  PPE family protein [Mycobacteri...   260    5e-68
gi|306785997|ref|ZP_07424319.1|  putative PPE family protein [Myc...   235    1e-60
gi|289448814|ref|ZP_06438558.1|  PPE family protein [Mycobacteriu...   155    1e-36
gi|121639018|ref|YP_979242.1|  PPE family protein [Mycobacterium ...   155    2e-36
gi|224991510|ref|YP_002646199.1|  PPE family protein [Mycobacteri...   155    2e-36
gi|31794311|ref|NP_856804.1|  PPE family protein [Mycobacterium b...   155    2e-36
gi|289575846|ref|ZP_06456073.1|  PPE family protein [Mycobacteriu...   155    2e-36
gi|340628111|ref|YP_004746563.1|  ppe family protein [Mycobacteri...   155    2e-36
gi|289759264|ref|ZP_06518642.1|  PPE family protein [Mycobacteriu...   155    2e-36
gi|240168615|ref|ZP_04747274.1|  PPE family protein [Mycobacteriu...   147    5e-34
gi|183980225|ref|YP_001848516.1|  PPE family protein, PPE51_2 [My...   141    3e-32
gi|183983449|ref|YP_001851740.1|  PPE family protein, PPE51_3 [My...   129    1e-28
gi|183981529|ref|YP_001849820.1|  PPE family protein, PPE51_1 [My...   123    1e-26
gi|118617918|ref|YP_906250.1|  PPE family protein [Mycobacterium ...   121    3e-26
gi|118618187|ref|YP_906519.1|  PPE family protein [Mycobacterium ...   121    4e-26
gi|298527010|ref|ZP_07014419.1|  ppe family protein [Mycobacteriu...   120    6e-26
gi|289755661|ref|ZP_06515039.1|  PPE family protein [Mycobacteriu...   120    6e-26
gi|183981528|ref|YP_001849819.1|  PPE family protein, PPE51 [Myco...   119    2e-25
gi|306782177|ref|ZP_07420514.1|  PPE family protein [Mycobacteriu...   117    6e-25
gi|15842710|ref|NP_337747.1|  PPE family protein [Mycobacterium t...   117    6e-25
gi|167970194|ref|ZP_02552471.1|  PPE family protein [Mycobacteriu...   117    7e-25
gi|323717804|gb|EGB27001.1|  hypothetical protein TMMG_00020 [Myc...   116    9e-25
gi|31794708|ref|NP_857201.1|  PPE family protein [Mycobacterium b...   116    1e-24
gi|308232493|ref|ZP_07416221.2|  PPE family protein [Mycobacteriu...   116    1e-24
gi|289572184|ref|ZP_06452411.1|  PPE family protein [Mycobacteriu...   116    1e-24
gi|289440961|ref|ZP_06430705.1|  PPE family protein [Mycobacteriu...   116    1e-24
gi|118617919|ref|YP_906251.1|  PPE family protein [Mycobacterium ...   115    1e-24
gi|289445124|ref|ZP_06434868.1|  PPE family protein [Mycobacteriu...   115    2e-24
gi|41409283|ref|NP_962119.1|  hypothetical protein MAP3185 [Mycob...   115    2e-24
gi|118466535|ref|YP_883168.1|  PPE family protein [Mycobacterium ...   115    2e-24
gi|339633530|ref|YP_004725172.1|  PPE family protein [Mycobacteri...   115    3e-24
gi|212596159|gb|ACJ35556.1|  PPE33 [Mycobacterium avium subsp. av...   114    5e-24
gi|340628112|ref|YP_004746564.1|  PPE family protein [Mycobacteri...   112    3e-23
gi|342861296|ref|ZP_08717944.1|  PPE family protein [Mycobacteriu...   111    5e-23
gi|118466030|ref|YP_881217.1|  PPE family protein [Mycobacterium ...   110    7e-23
gi|342861307|ref|ZP_08717955.1|  PPE family protein [Mycobacteriu...   110    7e-23
gi|212596672|gb|ACJ35597.1|  PPE33 [Mycobacterium intracellulare ...   110    8e-23
gi|212596661|gb|ACJ35596.1|  PPE32 [Mycobacterium intracellulare ...   109    2e-22
gi|333990650|ref|YP_004523264.1|  PPE family protein [Mycobacteri...   108    2e-22
gi|336458154|gb|EGO37137.1|  PPE-repeat containing protein [Mycob...   108    3e-22
gi|289574463|ref|ZP_06454690.1|  PPE family protein [Mycobacteriu...   107    7e-22
gi|240168614|ref|ZP_04747273.1|  PPE family protein, PPE51_2 [Myc...   105    2e-21
gi|306972073|ref|ZP_07484734.1|  putative PPE family protein [Myc...   104    5e-21
gi|323719699|gb|EGB28819.1|  PPE family protein [Mycobacterium tu...   104    5e-21
gi|308379036|ref|ZP_07484777.2|  putative PPE family protein [Myc...   104    5e-21
gi|323719718|gb|EGB28837.1|  PPE family protein [Mycobacterium tu...   104    5e-21
gi|15841259|ref|NP_336296.1|  PPE family protein [Mycobacterium t...   103    6e-21
gi|31792978|ref|NP_855471.1|  PPE family protein [Mycobacterium b...   103    6e-21
gi|57116912|ref|YP_177836.1|  PPE family protein [Mycobacterium t...   103    7e-21


>gi|57117064|ref|YP_177934.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|148662989|ref|YP_001284512.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|167970195|ref|ZP_02552472.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 31 more sequence titles
 Length=132

 Score =  261 bits (666),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 132/132 (100%), Positives = 132/132 (100%), Gaps = 0/132 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE
Sbjct  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120

Query  121  TASASNTAGTPP  132
            TASASNTAGTPP
Sbjct  121  TASASNTAGTPP  132


>gi|148824329|ref|YP_001289083.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|308375997|ref|ZP_07445788.2| PPE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308377230|ref|ZP_07441599.2| PPE family protein [Mycobacterium tuberculosis SUMu008]
 gi|308378200|ref|ZP_07481882.2| PPE family protein [Mycobacterium tuberculosis SUMu009]
 gi|148722856|gb|ABR07481.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|308344454|gb|EFP33305.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308348450|gb|EFP37301.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
 gi|308353080|gb|EFP41931.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
Length=185

 Score =  260 bits (664),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 132/132 (100%), Positives = 132/132 (100%), Gaps = 0/132 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct  54   MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  113

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE
Sbjct  114  ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  173

Query  121  TASASNTAGTPP  132
            TASASNTAGTPP
Sbjct  174  TASASNTAGTPP  185


>gi|306785997|ref|ZP_07424319.1| putative PPE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308329354|gb|EFP18205.1| putative PPE family protein [Mycobacterium tuberculosis SUMu003]
Length=121

 Score =  235 bits (600),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)

Query  12   SARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGPASTSMLAMSAP  71
            SARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGPASTSMLAMSAP
Sbjct  1    SARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGPASTSMLAMSAP  60

Query  72   YVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVETASASNTAGTP  131
            YVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVETASASNTAGTP
Sbjct  61   YVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVETASASNTAGTP  120

Query  132  P  132
            P
Sbjct  121  P  121


>gi|289448814|ref|ZP_06438558.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289421772|gb|EFD18973.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length=387

 Score =  155 bits (393),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI  117
            ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT  R    A+
Sbjct  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL  120

Query  118  VVETASASNTA  128
            +       NTA
Sbjct  121  IASNLLGQNTA  131


>gi|121639018|ref|YP_979242.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|121494666|emb|CAL73147.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
Length=381

 Score =  155 bits (393),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI  117
            ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT  R    A+
Sbjct  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL  120

Query  118  VVETASASNTA  128
            +       NTA
Sbjct  121  IASNLLGQNTA  131


>gi|224991510|ref|YP_002646199.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|224774625|dbj|BAH27431.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=381

 Score =  155 bits (393),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI  117
            ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT  R    A+
Sbjct  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL  120

Query  118  VVETASASNTA  128
            +       NTA
Sbjct  121  IASNLLGQNTA  131


>gi|31794311|ref|NP_856804.1| PPE family protein [Mycobacterium bovis AF2122/97]
 gi|31619907|emb|CAD95251.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|341603057|emb|CCC65735.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=381

 Score =  155 bits (393),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI  117
            ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT  R    A+
Sbjct  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL  120

Query  118  VVETASASNTA  128
            +       NTA
Sbjct  121  IASNLLGQNTA  131


>gi|289575846|ref|ZP_06456073.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|339633142|ref|YP_004724784.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|289540277|gb|EFD44855.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|339332498|emb|CCC28213.1| PPE family protein [Mycobacterium africanum GM041182]
Length=345

 Score =  155 bits (392),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI  117
            ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT  R    A+
Sbjct  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL  120

Query  118  VVETASASNTA  128
            +       NTA
Sbjct  121  IASNLLGQNTA  131


>gi|340628111|ref|YP_004746563.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
 gi|340006301|emb|CCC45480.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
Length=381

 Score =  155 bits (392),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI  117
            ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT  R    A+
Sbjct  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL  120

Query  118  VVETASASNTA  128
            +       NTA
Sbjct  121  IASNLLGQNTA  131


>gi|289759264|ref|ZP_06518642.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|289714828|gb|EFD78840.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|326902641|gb|EGE49574.1| PPE family protein [Mycobacterium tuberculosis W-148]
 gi|339295969|gb|AEJ48080.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
 gi|339299578|gb|AEJ51688.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=262

 Score =  155 bits (392),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 116/131 (89%), Positives = 118/131 (91%), Gaps = 3/131 (2%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP
Sbjct  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRG---AI  117
            ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVT  R    A+
Sbjct  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTANRAELKAL  120

Query  118  VVETASASNTA  128
            +       NTA
Sbjct  121  IASNLLGQNTA  131


 Score = 43.9 bits (102),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 21/22 (96%), Positives = 22/22 (100%), Gaps = 0/22 (0%)

Query  111  TGIRGAIVVETASASNTAGTPP  132
            +GIRGAIVVETASASNTAGTPP
Sbjct  241  SGIRGAIVVETASASNTAGTPP  262


>gi|240168615|ref|ZP_04747274.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=379

 Score =  147 bits (371),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 83/114 (73%), Positives = 94/114 (83%), Gaps = 0/114 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MDYAFLPPEINSAR+YSGPGP S+L AA  WDA+A EL SAA  Y SVI+ LT M+WWGP
Sbjct  1    MDYAFLPPEINSARIYSGPGPGSLLAAARGWDAVATELTSAAVGYRSVISSLTAMYWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR  114
            AS SMLA + P+VEWLE TAAQ K++A Q+RAAAAAFEQAHAMTVPPA+V   R
Sbjct  61   ASVSMLATAGPFVEWLETTAAQAKESADQSRAAAAAFEQAHAMTVPPAVVAANR  114


>gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [Mycobacterium marinum M]
 gi|183173551|gb|ACC38661.1| PPE family protein, PPE51_2 [Mycobacterium marinum M]
Length=381

 Score =  141 bits (356),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 71/114 (63%), Positives = 85/114 (75%), Gaps = 0/114 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NS  MY+GPG  S+L AA SWD LA EL + A+ Y SV++ LT M+W GP
Sbjct  1    MDFAMLPPEVNSGLMYTGPGAGSLLAAANSWDELAIELGTTAQTYESVLSGLTSMYWAGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR  114
            AS SM A +APYV WL  TA QT+QTATQ RAAA AFEQA+AMTVPP ++   R
Sbjct  61   ASESMAAKAAPYVWWLHSTAEQTQQTATQCRAAAMAFEQAYAMTVPPPVILANR  114


>gi|183983449|ref|YP_001851740.1| PPE family protein, PPE51_3 [Mycobacterium marinum M]
 gi|183176775|gb|ACC41885.1| PPE family protein, PPE51_3 [Mycobacterium marinum M]
Length=380

 Score =  129 bits (325),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 75/110 (69%), Positives = 91/110 (83%), Gaps = 0/110 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            M+YAFLPPE+NSARMYSGPGP S+L AAASWD +A ELAS AE Y SVI+ L+GM+WWGP
Sbjct  1    MNYAFLPPEVNSARMYSGPGPESLLAAAASWDMVAIELASTAEGYRSVISTLSGMYWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALV  110
            AS +MLA + P+++WLE T A   +TA QA AAAAA+EQA+AMTVPP +V
Sbjct  61   ASAAMLAATGPFIDWLEITGALASETANQATAAAAAYEQAYAMTVPPIVV  110


>gi|183981529|ref|YP_001849820.1| PPE family protein, PPE51_1 [Mycobacterium marinum M]
 gi|183174855|gb|ACC39965.1| PPE family protein, PPE51_1 [Mycobacterium marinum M]
Length=381

 Score =  123 bits (308),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 79/123 (65%), Positives = 96/123 (79%), Gaps = 0/123 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            M+YAFLPPE+NSARMYSGPG  S+L AAASWD +A ELASAAE Y SVI+ L+GM+WWGP
Sbjct  1    MNYAFLPPEVNSARMYSGPGSASLLAAAASWDMVAIELASAAEGYRSVISTLSGMYWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS +MLA + P+++WLE T A   +TA QA AAAAA+EQA+AMTVPP +V   R  +V  
Sbjct  61   ASAAMLAATGPFIDWLEITGALASETANQAAAAAAAYEQAYAMTVPPIVVAANRALLVAL  120

Query  121  TAS  123
             AS
Sbjct  121  VAS  123


>gi|118617918|ref|YP_906250.1| PPE family protein [Mycobacterium ulcerans Agy99]
 gi|118570028|gb|ABL04779.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=381

 Score =  121 bits (304),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 79/123 (65%), Positives = 95/123 (78%), Gaps = 0/123 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            M+YAFLPPE+NSARMYSGPG  S+L AAASWD +A ELASAAE Y SVI+ L+GM+WWGP
Sbjct  1    MNYAFLPPEVNSARMYSGPGSASLLAAAASWDMVAIELASAAEGYRSVISTLSGMYWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS +MLA + P++ WLE T A   +TA QA AAAAA+EQA+AMTVPP +V   R  +V  
Sbjct  61   ASAAMLAATGPFIGWLEITGALASETANQAAAAAAAYEQAYAMTVPPIVVAANRALLVAL  120

Query  121  TAS  123
             AS
Sbjct  121  VAS  123


>gi|118618187|ref|YP_906519.1| PPE family protein [Mycobacterium ulcerans Agy99]
 gi|118570297|gb|ABL05048.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=381

 Score =  121 bits (303),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 79/123 (65%), Positives = 95/123 (78%), Gaps = 0/123 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            M+YAFLPPE+NSARMYSGPG  S+L AAASWD +A ELASAAE Y SVI+ L+GM+WWGP
Sbjct  1    MNYAFLPPEVNSARMYSGPGSASLLAAAASWDMVAIELASAAEGYRSVISTLSGMYWWGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS +MLA + P++ WLE T A   +TA QA AAAAA+EQA+AMTVPP +V   R  +V  
Sbjct  61   ASAAMLAATGPFIGWLEITGALASETANQAAAAAAAYEQAYAMTVPPIVVAANRALLVAL  120

Query  121  TAS  123
             AS
Sbjct  121  VAS  123


>gi|298527010|ref|ZP_07014419.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298496804|gb|EFI32098.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
Length=405

 Score =  120 bits (302),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 73/118 (62%), Positives = 83/118 (71%), Gaps = 1/118 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NS RMYSGPG  S L AAA+WD ++AEL SAAE Y SVIA LTG  W GP
Sbjct  3    MDFAMLPPEVNSTRMYSGPGAGS-LWAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP  61

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV  118
            +S  M A   PYVEWL  TAAQ +QTATQ  AAA  FEQA AMTVPP  +   R  ++
Sbjct  62   SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL  119


>gi|289755661|ref|ZP_06515039.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289696248|gb|EFD63677.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=405

 Score =  120 bits (301),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 73/118 (62%), Positives = 83/118 (71%), Gaps = 1/118 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NS RMYSGPG  S L AAA+WD ++AEL SAAE Y SVIA LTG  W GP
Sbjct  3    MDFAMLPPEVNSTRMYSGPGAGS-LWAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP  61

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV  118
            +S  M A   PYVEWL  TAAQ +QTATQ  AAA  FEQA AMTVPP  +   R  ++
Sbjct  62   SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL  119


>gi|183981528|ref|YP_001849819.1| PPE family protein, PPE51 [Mycobacterium marinum M]
 gi|183174854|gb|ACC39964.1| PPE family protein, PPE51 [Mycobacterium marinum M]
Length=382

 Score =  119 bits (297),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 77/123 (63%), Positives = 92/123 (75%), Gaps = 0/123 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD++ LPPE+NSARMY+GPG  S+L AAASWDALAAEL + AE  GS++  LT + W GP
Sbjct  1    MDFSLLPPEVNSARMYTGPGSGSLLAAAASWDALAAELGTTAETCGSILTGLTDLSWRGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS SM A +APYV WL RTA QT+Q A QAR AA AFEQA+AMTVPP LV   R  ++V 
Sbjct  61   ASESMAASAAPYVGWLYRTAEQTQQAAIQARTAALAFEQAYAMTVPPPLVAANRAQLLVL  120

Query  121  TAS  123
             A+
Sbjct  121  IAT  123


>gi|306782177|ref|ZP_07420514.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
 gi|306790362|ref|ZP_07428684.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
 gi|306794889|ref|ZP_07433191.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308325139|gb|EFP13990.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308333218|gb|EFP22069.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308336675|gb|EFP25526.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
Length=380

 Score =  117 bits (293),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 71/114 (63%), Positives = 88/114 (78%), Gaps = 0/114 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NSARMY+GPG  S+L AA  WD+LAAELA+ AE YGSV++ L  +HW GP
Sbjct  1    MDFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR  114
            A+ SM   +APY+ WL  TA +T+QTA QARAAA AFEQA+AMT+PP +V   R
Sbjct  61   AAESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANR  114


>gi|15842710|ref|NP_337747.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31794312|ref|NP_856805.1| PPE family protein [Mycobacterium bovis AF2122/97]
 gi|57117065|ref|YP_177935.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 69 more sequence titles
 Length=380

 Score =  117 bits (293),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 71/114 (63%), Positives = 88/114 (78%), Gaps = 0/114 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NSARMY+GPG  S+L AA  WD+LAAELA+ AE YGSV++ L  +HW GP
Sbjct  1    MDFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR  114
            A+ SM   +APY+ WL  TA +T+QTA QARAAA AFEQA+AMT+PP +V   R
Sbjct  61   AAESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANR  114


>gi|167970194|ref|ZP_02552471.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=480

 Score =  117 bits (292),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 71/114 (63%), Positives = 88/114 (78%), Gaps = 0/114 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NSARMY+GPG  S+L AA  WD+LAAELA+ AE YGSV++ L  +HW GP
Sbjct  1    MDFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR  114
            A+ SM   +APY+ WL  TA +T+QTA QARAAA AFEQA+AMT+PP +V   R
Sbjct  61   AAESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANR  114


>gi|323717804|gb|EGB27001.1| hypothetical protein TMMG_00020 [Mycobacterium tuberculosis CDC1551A]
Length=140

 Score =  116 bits (291),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 72/118 (62%), Positives = 83/118 (71%), Gaps = 0/118 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NS RMYSGPG  S+  AAA+WD ++AEL SAAE Y SVIA LTG  W GP
Sbjct  3    MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP  62

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV  118
            +S  M A   PYVEWL  TAAQ +QTATQ  AAA  FEQA AMTVPP  +   R  ++
Sbjct  63   SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL  120


>gi|31794708|ref|NP_857201.1| PPE family protein [Mycobacterium bovis AF2122/97]
 gi|57117120|ref|YP_177984.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|121639451|ref|YP_979675.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 50 more sequence titles
 Length=406

 Score =  116 bits (291),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 72/118 (62%), Positives = 83/118 (71%), Gaps = 0/118 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NS RMYSGPG  S+  AAA+WD ++AEL SAAE Y SVIA LTG  W GP
Sbjct  3    MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP  62

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV  118
            +S  M A   PYVEWL  TAAQ +QTATQ  AAA  FEQA AMTVPP  +   R  ++
Sbjct  63   SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL  120


>gi|308232493|ref|ZP_07416221.2| PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308369156|ref|ZP_07416751.2| PPE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308371381|ref|ZP_07424759.2| PPE family protein [Mycobacterium tuberculosis SUMu003]
 9 more sequence titles
 Length=404

 Score =  116 bits (291),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 72/118 (62%), Positives = 83/118 (71%), Gaps = 0/118 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NS RMYSGPG  S+  AAA+WD ++AEL SAAE Y SVIA LTG  W GP
Sbjct  1    MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV  118
            +S  M A   PYVEWL  TAAQ +QTATQ  AAA  FEQA AMTVPP  +   R  ++
Sbjct  61   SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL  118


>gi|289572184|ref|ZP_06452411.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289536615|gb|EFD41193.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=406

 Score =  116 bits (291),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 72/118 (62%), Positives = 83/118 (71%), Gaps = 0/118 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NS RMYSGPG  S+  AAA+WD ++AEL SAAE Y SVIA LTG  W GP
Sbjct  3    MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP  62

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV  118
            +S  M A   PYVEWL  TAAQ +QTATQ  AAA  FEQA AMTVPP  +   R  ++
Sbjct  63   SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL  120


>gi|289440961|ref|ZP_06430705.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289571773|ref|ZP_06452000.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289752245|ref|ZP_06511623.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289413880|gb|EFD11120.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289545527|gb|EFD49175.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289692832|gb|EFD60261.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=406

 Score =  116 bits (290),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 72/118 (62%), Positives = 83/118 (71%), Gaps = 0/118 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NS RMYSGPG  S+  AAA+WD ++AEL SAAE Y SVIA LTG  W GP
Sbjct  3    MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP  62

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV  118
            +S  M A   PYVEWL  TAAQ +QTATQ  AAA  FEQA AMTVPP  +   R  ++
Sbjct  63   SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL  120


>gi|118617919|ref|YP_906251.1| PPE family protein [Mycobacterium ulcerans Agy99]
 gi|118570029|gb|ABL04780.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=382

 Score =  115 bits (289),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 76/123 (62%), Positives = 91/123 (74%), Gaps = 0/123 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD++ LPPE+NSARMY+GPG  S+L AAASWDALAAEL + AE  GS++  LT + W GP
Sbjct  1    MDFSLLPPEVNSARMYTGPGSGSLLAAAASWDALAAELGTTAETCGSILTGLTDLSWRGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS SM A +AP V WL RTA QT+Q A QAR AA AFEQA+AMTVPP LV   R  ++V 
Sbjct  61   ASESMAASAAPCVGWLYRTAEQTQQAAIQARTAALAFEQAYAMTVPPPLVAANRAQLLVL  120

Query  121  TAS  123
             A+
Sbjct  121  IAT  123


>gi|289445124|ref|ZP_06434868.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289418082|gb|EFD15283.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length=285

 Score =  115 bits (289),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 72/118 (62%), Positives = 83/118 (71%), Gaps = 0/118 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NS RMYSGPG  S+  AAA+WD ++AEL SAAE Y SVIA LTG  W GP
Sbjct  3    MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSVIASLTGWQWLGP  62

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV  118
            +S  M A   PYVEWL  TAAQ +QTATQ  AAA  FEQA AMTVPP  +   R  ++
Sbjct  63   SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL  120


>gi|41409283|ref|NP_962119.1| hypothetical protein MAP3185 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398103|gb|AAS05733.1| hypothetical protein MAP_3185 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336459363|gb|EGO38306.1| PPE family protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=362

 Score =  115 bits (288),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 80/131 (62%), Positives = 95/131 (73%), Gaps = 3/131 (2%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+ FLPPE+NSARMY+GPG  S+L AA SWD+LAAEL+  A  Y SV+A LTG++W GP
Sbjct  1    MDFGFLPPEVNSARMYAGPGSGSLLAAAGSWDSLAAELSITAAVYESVLAGLTGLYWHGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR---GAI  117
            AS +M A +APYV WL  TA + +QTATQARAAAAA+E AHAMTVPPA V   R    A+
Sbjct  61   ASRAMAAGAAPYVGWLHTTAERAQQTATQARAAAAAYELAHAMTVPPAAVAANRTQLAAL  120

Query  118  VVETASASNTA  128
            V       NTA
Sbjct  121  VATNFFGQNTA  131


>gi|118466535|ref|YP_883168.1| PPE family protein [Mycobacterium avium 104]
 gi|118167822|gb|ABK68719.1| PPE family protein [Mycobacterium avium 104]
Length=362

 Score =  115 bits (288),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 80/131 (62%), Positives = 95/131 (73%), Gaps = 3/131 (2%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+ FLPPE+NSARMY+GPG  S+L AA SWD+LAAEL+  A  Y SV+A LTG++W GP
Sbjct  1    MDFGFLPPEVNSARMYAGPGSGSLLAAAGSWDSLAAELSITAAVYESVLAGLTGLYWHGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR---GAI  117
            AS +M A +APYV WL  TA + +QTATQARAAAAA+E AHAMTVPPA V   R    A+
Sbjct  61   ASRAMAAGAAPYVGWLHTTAERAQQTATQARAAAAAYELAHAMTVPPAAVAANRTQLAAL  120

Query  118  VVETASASNTA  128
            V       NTA
Sbjct  121  VATNFFGQNTA  131


>gi|339633530|ref|YP_004725172.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|339332886|emb|CCC28613.1| PPE family protein [Mycobacterium africanum GM041182]
Length=406

 Score =  115 bits (287),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 71/118 (61%), Positives = 83/118 (71%), Gaps = 0/118 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NS RMYSGPG  S+  AAA+WD ++AEL SAAE Y S+IA LTG  W GP
Sbjct  3    MDFAMLPPEVNSTRMYSGPGAGSLWAAAAAWDQVSAELQSAAETYRSMIASLTGWQWLGP  62

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIV  118
            +S  M A   PYVEWL  TAAQ +QTATQ  AAA  FEQA AMTVPP  +   R  ++
Sbjct  63   SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVL  120


>gi|212596159|gb|ACJ35556.1| PPE33 [Mycobacterium avium subsp. avium]
Length=362

 Score =  114 bits (285),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 79/131 (61%), Positives = 94/131 (72%), Gaps = 3/131 (2%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+ FLPPE+NSARMY+GPG  S+L AA SWD+LAAEL+  A  Y SV+  LTG++W GP
Sbjct  1    MDFGFLPPEVNSARMYAGPGSGSLLAAAGSWDSLAAELSITAAVYESVLGGLTGLYWHGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR---GAI  117
            AS +M A +APYV WL  TA + +QTATQARAAAAA+E AHAMTVPPA V   R    A+
Sbjct  61   ASRAMAAGAAPYVGWLHTTAERAQQTATQARAAAAAYELAHAMTVPPAAVAANRTQLAAL  120

Query  118  VVETASASNTA  128
            V       NTA
Sbjct  121  VATNFFGQNTA  131


>gi|340628112|ref|YP_004746564.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
 gi|340006302|emb|CCC45481.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=380

 Score =  112 bits (279),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 70/114 (62%), Positives = 86/114 (76%), Gaps = 0/114 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NSARMY+GPG  S+  AA  WD+LAAELA+ AE YGSV++ L  +HW GP
Sbjct  1    MDFALLPPEVNSARMYTGPGAGSLWAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR  114
            A+ SM   +A Y+ WL  TA +T+QTA QARAAA AFEQA+AMT+PP LV   R
Sbjct  61   AAESMAVTAAAYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPLVAANR  114


>gi|342861296|ref|ZP_08717944.1| PPE family protein [Mycobacterium colombiense CECT 3035]
 gi|342131196|gb|EGT84477.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=395

 Score =  111 bits (277),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 66/114 (58%), Positives = 85/114 (75%), Gaps = 0/114 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            +D+A LPPEINSARMYSGPG   ML AAA+W+ +AAE+ +AA +YGSV+  L+   W GP
Sbjct  2    LDFAALPPEINSARMYSGPGSGPMLAAAAAWNTMAAEMRAAAASYGSVVTELSSEGWLGP  61

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR  114
            +S SMLA +APY+ WL+ TA Q ++  +QA AAA A+E A AMTVPPA+V   R
Sbjct  62   SSMSMLAAAAPYLAWLDGTATQAEEVGSQAFAAATAYESAFAMTVPPAVVAANR  115


>gi|118466030|ref|YP_881217.1| PPE family protein [Mycobacterium avium 104]
 gi|118167317|gb|ABK68214.1| ppe family protein [Mycobacterium avium 104]
Length=443

 Score =  110 bits (275),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 69/114 (61%), Positives = 78/114 (69%), Gaps = 0/114 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+  LPPEINS RMYSGPGP S+L AAA W++LAAELA  A NY +VIA LT   W GP
Sbjct  1    MDFGALPPEINSGRMYSGPGPASLLAAAAGWESLAAELADGAGNYQAVIAGLTNESWLGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR  114
            AS SM     PYV WL   A Q  + A QA AAA+AFE A+AMTVPP L+   R
Sbjct  61   ASLSMAGAVMPYVSWLTAVAEQCGRAAAQATAAASAFEAAYAMTVPPPLIAANR  114


>gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacterium colombiense CECT 3035]
 gi|342131207|gb|EGT84488.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=417

 Score =  110 bits (275),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 73/129 (57%), Positives = 89/129 (69%), Gaps = 2/129 (1%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+  LPPEINS RMY+GPG   M+ AAA+WD L AEL+SAA  Y SVI+ LT   W GP
Sbjct  1    MDFGALPPEINSGRMYAGPGSGPMMAAAAAWDGLGAELSSAASGYTSVISELTHAPWVGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS+SML+   PYV WL   AAQ ++TA QARAAAAAFE A AMTVPP ++   R  +++ 
Sbjct  61   ASSSMLSAVTPYVSWLSVLAAQAEETAGQARAAAAAFEAAFAMTVPPPVIAANR--VLLA  118

Query  121  TASASNTAG  129
               A+N  G
Sbjct  119  NLVATNFLG  127


>gi|212596672|gb|ACJ35597.1| PPE33 [Mycobacterium intracellulare ATCC 13950]
Length=390

 Score =  110 bits (274),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 69/114 (61%), Positives = 84/114 (74%), Gaps = 0/114 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+ FLPPE+NS RMY+GPG  S+L AA SWD+LAAEL+  A  Y SV++ LTG+ W+GP
Sbjct  1    MDFGFLPPEVNSGRMYAGPGSGSLLAAAGSWDSLAAELSITAAVYESVLSGLTGLSWYGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR  114
            AS +M A +APYV WL  TA + +QT  QARAAAAA+E A AMTVPP  V   R
Sbjct  61   ASQAMAASAAPYVGWLHATAERAQQTGIQARAAAAAYELARAMTVPPPAVAANR  114


>gi|212596661|gb|ACJ35596.1| PPE32 [Mycobacterium intracellulare ATCC 13950]
Length=391

 Score =  109 bits (272),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 75/131 (58%), Positives = 94/131 (72%), Gaps = 4/131 (3%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+AF+PPEINSARMY+GPG  S+L AA SWDAL+AEL+SAAE Y S ++ L  + W GP
Sbjct  1    MDWAFVPPEINSARMYTGPGMGSLLAAAGSWDALSAELSSAAEGYESALSGLD-LQWRGP  59

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR---GAI  117
            A+ +M   +  Y EWL+ TA QT+QTA QAR AAAA+EQA+AMTVPP ++T  R    A+
Sbjct  60   AAQAMAFAAIRYAEWLQVTAEQTRQTAMQARTAAAAYEQAYAMTVPPPVITANRTLLAAL  119

Query  118  VVETASASNTA  128
            V       NTA
Sbjct  120  VASNIVGQNTA  130


>gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacterium sp. JDM601]
 gi|333486619|gb|AEF36011.1| PPE family protein [Mycobacterium sp. JDM601]
Length=386

 Score =  108 bits (270),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 65/114 (58%), Positives = 78/114 (69%), Gaps = 0/114 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+  LPPEINSAR+Y+G GP S+L AA +W  LA EL SAA +YGSVIA LT   W GP
Sbjct  1    MDFGALPPEINSARIYAGAGPGSLLAAATAWQELATELNSAAASYGSVIAGLTTGSWAGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR  114
            +S +M A + PY+ WL  T AQ +Q A Q  AA AA+E A A TVPP L+T  R
Sbjct  61   SSVAMAAAAGPYITWLNATGAQAQQAAAQVSAAVAAYETAFAATVPPPLITANR  114


>gi|336458154|gb|EGO37137.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=443

 Score =  108 bits (270),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 68/114 (60%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+  LPPEINS RMYSGPGP S+L AAA W++LAAELA  A NY +VIA LT   W GP
Sbjct  1    MDFGALPPEINSGRMYSGPGPASLLAAAAGWESLAAELADGAGNYQAVIAGLTNESWLGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR  114
            AS SM     PY  WL   A Q  + A QA AAA+AFE A+AMTVPP L+   R
Sbjct  61   ASLSMAGAVMPYASWLTAVAEQCGRAAAQATAAASAFEAAYAMTVPPPLIAANR  114


>gi|289574463|ref|ZP_06454690.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289538894|gb|EFD43472.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=365

 Score =  107 bits (266),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 71/129 (56%), Positives = 84/129 (66%), Gaps = 2/129 (1%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+  LPPEINS RMY GPG   ML AAA WD +A EL  AA  Y SVIA LTG  W G 
Sbjct  1    MDFGALPPEINSGRMYCGPGSGPMLAAAAPWDGVAVELGLAATGYASVIAELTGAPWVGA  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS SM+A + PYV WL + AA+ +Q   QA AAAAA+E A  MTVPP ++T  R  ++V 
Sbjct  61   ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM  118

Query  121  TASASNTAG  129
            T  A+N  G
Sbjct  119  TLIATNFFG  127


>gi|240168614|ref|ZP_04747273.1| PPE family protein, PPE51_2 [Mycobacterium kansasii ATCC 12478]
Length=378

 Score =  105 bits (262),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 73/114 (65%), Positives = 86/114 (76%), Gaps = 0/114 (0%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+A LPPE+NS R+Y+GPGP S+L AA SWDALA EL + A+ Y SV++ LT + W+GP
Sbjct  1    MDFALLPPEVNSGRIYTGPGPGSLLAAAGSWDALATELDTTAQTYESVVSGLTTLDWYGP  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIR  114
            AS SM A  APYV WL  TA QTKQTA QARAAAAAF+QA AMTVPP  +   R
Sbjct  61   ASESMAAKVAPYVSWLYTTATQTKQTAMQARAAAAAFDQAFAMTVPPPAIAANR  114


>gi|306972073|ref|ZP_07484734.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308358453|gb|EFP47304.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
Length=179

 Score =  104 bits (259),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 71/129 (56%), Positives = 85/129 (66%), Gaps = 2/129 (1%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+  LPPEINS RMY GPG   ML AAA+WD +A EL  AA  Y SVIA LTG  W G 
Sbjct  1    MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS SM+A + PYV WL + AA+ +Q   QA AAAAA+E A  MTVPP ++T  R  ++V 
Sbjct  61   ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM  118

Query  121  TASASNTAG  129
            T  A+N  G
Sbjct  119  TLIATNFFG  127


>gi|323719699|gb|EGB28819.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=186

 Score =  104 bits (259),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 71/129 (56%), Positives = 85/129 (66%), Gaps = 2/129 (1%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+  LPPEINS RMY GPG   ML AAA+WD +A EL  AA  Y SVIA LTG  W G 
Sbjct  14   MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA  73

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS SM+A + PYV WL + AA+ +Q   QA AAAAA+E A  MTVPP ++T  R  ++V 
Sbjct  74   ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM  131

Query  121  TASASNTAG  129
            T  A+N  G
Sbjct  132  TLIATNFFG  140


>gi|308379036|ref|ZP_07484777.2| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308358418|gb|EFP47269.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
Length=176

 Score =  104 bits (259),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 71/129 (56%), Positives = 85/129 (66%), Gaps = 2/129 (1%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+  LPPEINS RMY GPG   ML AAA+WD +A EL  AA  Y SVIA LTG  W G 
Sbjct  14   MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA  73

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS SM+A + PYV WL + AA+ +Q   QA AAAAA+E A  MTVPP ++T  R  ++V 
Sbjct  74   ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM  131

Query  121  TASASNTAG  129
            T  A+N  G
Sbjct  132  TLIATNFFG  140


>gi|323719718|gb|EGB28837.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=163

 Score =  104 bits (259),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 70/126 (56%), Positives = 84/126 (67%), Gaps = 2/126 (1%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+  LPPEINS RMY GPG   ML AAA+WD +A EL  AA  Y SVIA LTG  W G 
Sbjct  1    MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS SM+A + PYV WL + AA+ +Q   QA AAAAA+E A  MTVPP ++T  R  ++V 
Sbjct  61   ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM  118

Query  121  TASASN  126
            T  A+N
Sbjct  119  TLIATN  124


>gi|15841259|ref|NP_336296.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|167967961|ref|ZP_02550238.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|253799169|ref|YP_003032170.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|254550799|ref|ZP_05141246.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|13881486|gb|AAK46110.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|253320672|gb|ACT25275.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|328458924|gb|AEB04347.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length=363

 Score =  103 bits (258),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 71/129 (56%), Positives = 85/129 (66%), Gaps = 2/129 (1%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+  LPPEINS RMY GPG   ML AAA+WD +A EL  AA  Y SVIA LTG  W G 
Sbjct  14   MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA  73

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS SM+A + PYV WL + AA+ +Q   QA AAAAA+E A  MTVPP ++T  R  ++V 
Sbjct  74   ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM  131

Query  121  TASASNTAG  129
            T  A+N  G
Sbjct  132  TLIATNFFG  140


>gi|31792978|ref|NP_855471.1| PPE family protein [Mycobacterium bovis AF2122/97]
 gi|31618569|emb|CAD94521.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=350

 Score =  103 bits (258),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 71/129 (56%), Positives = 85/129 (66%), Gaps = 2/129 (1%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+  LPPEINS RMY GPG   ML AAA+WD +A EL  AA  Y SVIA LTG  W G 
Sbjct  1    MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS SM+A + PYV WL + AA+ +Q   QA AAAAA+E A  MTVPP ++T  R  ++V 
Sbjct  61   ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM  118

Query  121  TASASNTAG  129
            T  A+N  G
Sbjct  119  TLIATNFFG  127


>gi|57116912|ref|YP_177836.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|121637691|ref|YP_977914.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148661597|ref|YP_001283120.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 47 more sequence titles
 Length=350

 Score =  103 bits (258),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 71/129 (56%), Positives = 85/129 (66%), Gaps = 2/129 (1%)

Query  1    MDYAFLPPEINSARMYSGPGPNSMLVAAASWDALAAELASAAENYGSVIARLTGMHWWGP  60
            MD+  LPPEINS RMY GPG   ML AAA+WD +A EL  AA  Y SVIA LTG  W G 
Sbjct  1    MDFGALPPEINSGRMYCGPGSGPMLAAAAAWDGVAVELGLAATGYASVIAELTGAPWVGA  60

Query  61   ASTSMLAMSAPYVEWLERTAAQTKQTATQARAAAAAFEQAHAMTVPPALVTGIRGAIVVE  120
            AS SM+A + PYV WL + AA+ +Q   QA AAAAA+E A  MTVPP ++T  R  ++V 
Sbjct  61   ASLSMVAAATPYVAWLSQAAARAEQAGMQAAAAAAAYEAAFVMTVPPPVITANR--VLVM  118

Query  121  TASASNTAG  129
            T  A+N  G
Sbjct  119  TLIATNFFG  127



Lambda     K      H
   0.313    0.121    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 130990493970


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40