BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 21,062,489 sequences; 7,218,481,314 total letters Query= Rv3136A Rv3136A Conserved protein 3502945:3503277 reverse MW:11695 Length=110 Score E Sequences producing significant alignments: (Bits) Value gi|15842711|ref|NP_337748.1| hypothetical protein MT3222 [Mycoba... 215 2e-54 gi|383308879|ref|YP_005361690.1| hypothetical protein MRGA327_19... 213 8e-54 gi|306785999|ref|ZP_07424321.1| hypothetical protein TMCG_01554 ... 212 2e-53 gi|148662991|ref|YP_001284514.1| hypothetical protein MRA_3169 [... 202 2e-50 gi|254552227|ref|ZP_05142674.1| hypothetical protein Mtube_17528... 200 8e-50 gi|289571347|ref|ZP_06451574.1| conserved hypothetical protein [... 189 2e-46 gi|400535600|ref|ZP_10799136.1| hypothetical protein MCOL_V21445... 160 5e-38 gi|353193450|gb|EHB58954.1| hypothetical protein MycrhDRAFT_1390... 157 6e-37 gi|118617920|ref|YP_906252.1| hypothetical protein MUL_2429 [Myc... 155 3e-36 gi|254821117|ref|ZP_05226118.1| hypothetical protein MintA_14367... 151 4e-35 gi|387877243|ref|YP_006307547.1| hypothetical protein W7S_19335 ... 151 4e-35 gi|383825069|ref|ZP_09980220.1| hypothetical protein MXEN_09474 ... 145 2e-33 gi|41409284|ref|NP_962120.1| hypothetical protein MAP3186c [Myco... 145 2e-33 gi|118466283|ref|YP_883169.1| hypothetical protein MAV_4016 [Myc... 145 2e-33 gi|15827275|ref|NP_301538.1| hypothetical protein ML0663 [Mycoba... 144 5e-33 gi|254776439|ref|ZP_05217955.1| hypothetical protein MaviaA2_174... 144 5e-33 gi|296169209|ref|ZP_06850862.1| conserved hypothetical protein [... 144 8e-33 gi|358233281|dbj|GAA46773.1| hypothetical protein NCGM2209_3417 ... 144 9e-33 gi|408779970|ref|ZP_11191743.1| hypothetical protein MkanA1_0475... 136 1e-30 gi|404424873|ref|ZP_11006407.1| hypothetical protein MFORT_29879... 135 3e-30 gi|119867675|ref|YP_937627.1| hypothetical protein Mkms_1630 [My... 134 6e-30 gi|357022175|ref|ZP_09084404.1| hypothetical protein KEK_19259 [... 132 2e-29 gi|333991487|ref|YP_004524101.1| hypothetical protein JDM601_284... 128 4e-28 gi|118471748|ref|YP_886445.1| hypothetical protein MSMEG_2084 [M... 126 1e-27 gi|374611915|ref|ZP_09684698.1| hypothetical protein MyctuDRAFT_... 126 2e-27 gi|126434174|ref|YP_001069865.1| hypothetical protein Mjls_1576 ... 125 3e-27 gi|306790364|ref|ZP_07428686.1| hypothetical protein TMDG_01968 ... 119 2e-25 gi|407982833|ref|ZP_11163498.1| hypothetical protein C731_1450 [... 118 5e-25 gi|392415429|ref|YP_006452034.1| hypothetical protein Mycch_1555... 116 2e-24 gi|375137432|ref|YP_004998081.1| hypothetical protein [Mycobacte... 114 5e-24 gi|120402906|ref|YP_952735.1| hypothetical protein Mvan_1909 [My... 110 8e-23 gi|383820471|ref|ZP_09975727.1| hypothetical protein MPHLEI_1410... 102 2e-20 gi|404442034|ref|ZP_11007216.1| hypothetical protein MVAC_02444 ... 100 1e-19 gi|407647632|ref|YP_006811391.1| hypothetical protein O3I_032340... 97.4 8e-19 gi|145225032|ref|YP_001135710.1| hypothetical protein Mflv_4453 ... 97.4 9e-19 gi|378821252|ref|ZP_09844164.1| hypothetical protein O3I_41110, ... 97.1 1e-18 gi|315445401|ref|YP_004078280.1| hypothetical protein Mspyr1_385... 96.3 2e-18 gi|392065707|gb|EIT91555.1| hypothetical protein MA4S0726RB_2885... 91.7 5e-17 gi|169630565|ref|YP_001704214.1| hypothetical protein MAB_3484c ... 91.3 5e-17 gi|392078695|gb|EIU04522.1| hypothetical protein MA5S0422_4071 [... 91.3 6e-17 gi|353451841|gb|EHC00235.1| hypothetical protein MAB47J26_01950 ... 91.3 6e-17 gi|382939644|gb|EIC63971.1| hypothetical protein S7W_21256 [Myco... 91.3 6e-17 gi|392177821|gb|EIV03474.1| hypothetical protein MM2B0912R_3701 ... 90.9 7e-17 gi|363995527|gb|EHM16744.1| hypothetical protein MBOL_33300 [Myc... 90.9 7e-17 gi|365871425|ref|ZP_09410966.1| hypothetical protein MMAS_33680 ... 90.9 7e-17 gi|379710182|ref|YP_005265387.1| hypothetical protein NOCYR_3992... 85.1 4e-15 gi|392223301|gb|EIV48823.1| hypothetical protein MA3A0930R_3725 ... 84.0 9e-15 gi|54026233|ref|YP_120475.1| hypothetical protein nfa42620 [Noca... 81.6 5e-14 gi|403724385|ref|ZP_10946023.1| hypothetical protein GORHZ_098_0... 61.2 7e-08 gi|377563642|ref|ZP_09792981.1| hypothetical protein GOSPT_034_0... 59.3 2e-07 >gi|15842711|ref|NP_337748.1| hypothetical protein MT3222 [Mycobacterium tuberculosis CDC1551] gi|167970193|ref|ZP_02552470.1| hypothetical protein MtubH3_20083 [Mycobacterium tuberculosis H37Ra] gi|253800170|ref|YP_003033171.1| hypothetical protein TBMG_04099 [Mycobacterium tuberculosis KZN 1435] 41 more sequence titles Length=110 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 109/110 (99%), Positives = 110/110 (100%), Gaps = 0/110 (0%) Query 1 VGWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII 60 +GWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII Sbjct 1 MGWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII 60 Query 61 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG 110 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG Sbjct 61 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG 110 >gi|383308879|ref|YP_005361690.1| hypothetical protein MRGA327_19285 [Mycobacterium tuberculosis RGTB327] gi|380722832|gb|AFE17941.1| hypothetical protein MRGA327_19285 [Mycobacterium tuberculosis RGTB327] Length=110 Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 108/110 (99%), Positives = 109/110 (99%), Gaps = 0/110 (0%) Query 1 VGWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII 60 +GWEFGVLLILIAVL VFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII Sbjct 1 MGWEFGVLLILIAVLGVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII 60 Query 61 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG 110 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG Sbjct 61 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG 110 >gi|306785999|ref|ZP_07424321.1| hypothetical protein TMCG_01554 [Mycobacterium tuberculosis SUMu003] gi|308329356|gb|EFP18207.1| hypothetical protein TMCG_01554 [Mycobacterium tuberculosis SUMu003] Length=110 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 108/110 (99%), Positives = 109/110 (99%), Gaps = 0/110 (0%) Query 1 VGWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII 60 +GWEFGVLLILIAVLAVFLAP LIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII Sbjct 1 MGWEFGVLLILIAVLAVFLAPLLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII 60 Query 61 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG 110 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG Sbjct 61 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG 110 >gi|148662991|ref|YP_001284514.1| hypothetical protein MRA_3169 [Mycobacterium tuberculosis H37Ra] gi|294993115|ref|ZP_06798806.1| hypothetical protein Mtub2_01046 [Mycobacterium tuberculosis 210] gi|297635779|ref|ZP_06953559.1| hypothetical protein MtubK4_16727 [Mycobacterium tuberculosis KZN 4207] gi|297732776|ref|ZP_06961894.1| hypothetical protein MtubKR_16882 [Mycobacterium tuberculosis KZN R506] gi|313660109|ref|ZP_07816989.1| hypothetical protein MtubKV_16887 [Mycobacterium tuberculosis KZN V2475] gi|148507143|gb|ABQ74952.1| hypothetical protein MRA_3169 [Mycobacterium tuberculosis H37Ra] Length=104 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 103/104 (99%), Positives = 104/104 (100%), Gaps = 0/104 (0%) Query 7 VLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITGPTVN 66 +LLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITGPTVN Sbjct 1 MLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITGPTVN 60 Query 67 EYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG 110 EYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG Sbjct 61 EYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG 104 >gi|254552227|ref|ZP_05142674.1| hypothetical protein Mtube_17528 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=104 Score = 200 bits (509), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 102/104 (99%), Positives = 103/104 (99%), Gaps = 0/104 (0%) Query 7 VLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITGPTVN 66 +LLILIAVL VFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITGPTVN Sbjct 1 MLLILIAVLGVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITGPTVN 60 Query 67 EYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG 110 EYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG Sbjct 61 EYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG 104 >gi|289571347|ref|ZP_06451574.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289545101|gb|EFD48749.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=109 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 99/110 (90%), Positives = 100/110 (91%), Gaps = 1/110 (0%) Query 1 VGWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII 60 +GWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII Sbjct 1 MGWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII 60 Query 61 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG 110 TGPTVNEYAVYQRMAVDVD VVYSPKNPDNWTFTPNGPPVG Sbjct 61 TGPTVNEYAVYQRMAVDVDSGRRRSNT-SVVYSPKNPDNWTFTPNGPPVG 109 >gi|400535600|ref|ZP_10799136.1| hypothetical protein MCOL_V214459 [Mycobacterium colombiense CECT 3035] gi|400330643|gb|EJO88140.1| hypothetical protein MCOL_V214459 [Mycobacterium colombiense CECT 3035] Length=122 Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 76/100 (76%), Positives = 90/100 (90%), Gaps = 0/100 (0%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITG 62 WEFG+LL+L+A+L VFL R +PRGPRG+L SGTLLVTG+SPRPDA G+Q+VTIAG++ G Sbjct 2 WEFGLLLLLVAILGVFLVQRFVPRGPRGELLSGTLLVTGISPRPDATGEQFVTIAGVMNG 61 Query 63 PTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 PTVNE+AVYQRMAVDVD WPT+GQ+ PVVYSPKNPDNW F Sbjct 62 PTVNEHAVYQRMAVDVDHWPTIGQLFPVVYSPKNPDNWRF 101 >gi|353193450|gb|EHB58954.1| hypothetical protein MycrhDRAFT_1390 [Mycobacterium rhodesiae JS60] Length=126 Score = 157 bits (397), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 71/102 (70%), Positives = 88/102 (87%), Gaps = 0/102 (0%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITG 62 WEF V+L+++ L + L PRL+ RGPRG++A GTLLVTGVSPRPD G+QYVTI+G+I G Sbjct 22 WEFFVILLIVGALVLVLGPRLMRRGPRGEVAQGTLLVTGVSPRPDVTGEQYVTISGVING 81 Query 63 PTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTP 104 PTVNE+ VYQRMAVDV+ WPT+GQ++PVVYSPKNPDNW+F P Sbjct 82 PTVNEHVVYQRMAVDVNSWPTMGQLIPVVYSPKNPDNWSFAP 123 >gi|118617920|ref|YP_906252.1| hypothetical protein MUL_2429 [Mycobacterium ulcerans Agy99] gi|183981527|ref|YP_001849818.1| hypothetical protein MMAR_1512 [Mycobacterium marinum M] gi|118570030|gb|ABL04781.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] gi|183174853|gb|ACC39963.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=111 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 86/109 (79%), Positives = 93/109 (86%), Gaps = 1/109 (0%) Query 1 VGWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPD-AGGQQYVTIAGI 59 +GWEFGVLLIL+AVL FLAPR +PRGPRG LASGTLLVTGVSPRPD A G+QYVTI G+ Sbjct 1 MGWEFGVLLILVAVLLAFLAPRFLPRGPRGALASGTLLVTGVSPRPDDAVGEQYVTITGV 60 Query 60 ITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPP 108 I GPTVNEY VY RMAVDVDQWP+ GQ+LPVVYSPKNPDNW F PP Sbjct 61 INGPTVNEYTVYGRMAVDVDQWPSTGQVLPVVYSPKNPDNWNFALEEPP 109 >gi|254821117|ref|ZP_05226118.1| hypothetical protein MintA_14367 [Mycobacterium intracellulare ATCC 13950] gi|379748583|ref|YP_005339404.1| hypothetical protein OCU_38640 [Mycobacterium intracellulare ATCC 13950] gi|379755879|ref|YP_005344551.1| hypothetical protein OCO_38670 [Mycobacterium intracellulare MOTT-02] 6 more sequence titles Length=114 Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 78/98 (80%), Positives = 91/98 (93%), Gaps = 0/98 (0%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITG 62 WEFG+L++LIAVLAVFL R +PRGPRG+L SGTLLVTGVSPRPDA G+Q+VTIAG+I G Sbjct 2 WEFGLLILLIAVLAVFLVQRFVPRGPRGELLSGTLLVTGVSPRPDATGEQFVTIAGVING 61 Query 63 PTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNW 100 P+VNE+AVYQRMAVDVDQWPT+GQ+ PV+YSPKNPDNW Sbjct 62 PSVNEHAVYQRMAVDVDQWPTIGQLFPVLYSPKNPDNW 99 >gi|387877243|ref|YP_006307547.1| hypothetical protein W7S_19335 [Mycobacterium sp. MOTT36Y] gi|386790701|gb|AFJ36820.1| hypothetical protein W7S_19335 [Mycobacterium sp. MOTT36Y] Length=114 Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 78/98 (80%), Positives = 91/98 (93%), Gaps = 0/98 (0%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITG 62 WEFG+L++LIAVLAVFL R +PRGPRG+L SGTLLVTGVSPRPDA G+Q+VTIAG+I G Sbjct 2 WEFGLLILLIAVLAVFLVQRFVPRGPRGELLSGTLLVTGVSPRPDATGEQFVTIAGVING 61 Query 63 PTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNW 100 P+VNE+AVYQRMAVDVDQWPT+GQ+ PV+YSPKNPDNW Sbjct 62 PSVNEHAVYQRMAVDVDQWPTIGQLFPVLYSPKNPDNW 99 >gi|383825069|ref|ZP_09980220.1| hypothetical protein MXEN_09474 [Mycobacterium xenopi RIVM700367] gi|383335471|gb|EID13901.1| hypothetical protein MXEN_09474 [Mycobacterium xenopi RIVM700367] Length=104 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 71/96 (74%), Positives = 79/96 (83%), Gaps = 0/96 (0%) Query 7 VLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITGPTVN 66 +LL+LIA LAV LAPR I RGP D GTLLVTGVSPRPDA G+QYVTI G+I GPTVN Sbjct 1 MLLLLIATLAVLLAPRFIRRGPGQDAVHGTLLVTGVSPRPDATGEQYVTITGVINGPTVN 60 Query 67 EYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 E+ VYQRMAV+VD+WPT G +LPVVYS KNPDNW F Sbjct 61 EHTVYQRMAVNVDEWPTRGDLLPVVYSQKNPDNWAF 96 >gi|41409284|ref|NP_962120.1| hypothetical protein MAP3186c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398104|gb|AAS05734.1| hypothetical protein MAP_3186c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459362|gb|EGO38305.1| hypothetical protein MAPs_04610 [Mycobacterium avium subsp. paratuberculosis S397] Length=114 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/100 (77%), Positives = 91/100 (91%), Gaps = 0/100 (0%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITG 62 WEFG+L++L+AVLAVFL R +PRGPRG+L SGTLLVTGVSPRP+A G+QYVTIAG+I G Sbjct 2 WEFGLLVLLVAVLAVFLVQRFVPRGPRGELLSGTLLVTGVSPRPEATGEQYVTIAGVING 61 Query 63 PTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 PTVNE+AVYQRMAVDV+QWPT+GQ+ PV+YS KNPDNW F Sbjct 62 PTVNEHAVYQRMAVDVNQWPTIGQLFPVLYSSKNPDNWRF 101 >gi|118466283|ref|YP_883169.1| hypothetical protein MAV_4016 [Mycobacterium avium 104] gi|118167570|gb|ABK68467.1| conserved hypothetical protein [Mycobacterium avium 104] Length=117 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/100 (77%), Positives = 91/100 (91%), Gaps = 0/100 (0%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITG 62 WEFG+L++L+AVLAVFL R +PRGPRG+L SGTLLVTGVSPRP+A G+QYVTIAG+I G Sbjct 2 WEFGLLVLLVAVLAVFLVQRFVPRGPRGELLSGTLLVTGVSPRPEATGEQYVTIAGVING 61 Query 63 PTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 PTVNE+AVYQRMAVDV+QWPT+GQ+ PV+YS KNPDNW F Sbjct 62 PTVNEHAVYQRMAVDVNQWPTIGQLFPVLYSSKNPDNWRF 101 >gi|15827275|ref|NP_301538.1| hypothetical protein ML0663 [Mycobacterium leprae TN] gi|221229753|ref|YP_002503169.1| hypothetical protein MLBr_00663 [Mycobacterium leprae Br4923] gi|2326696|emb|CAB11009.1| hypothetical protein MLCB1779.28 [Mycobacterium leprae] gi|13092824|emb|CAC30172.1| hypothetical protein [Mycobacterium leprae] gi|219932860|emb|CAR70757.1| hypothetical protein MLBr00663 [Mycobacterium leprae Br4923] Length=104 Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 70/102 (69%), Positives = 84/102 (83%), Gaps = 3/102 (2%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPD-AGGQQYVTIAGIIT 61 WEFG+L +L+A+L VFLA R +P DLASGTLLVTGVSPRPD A G+Q+VTIAG I+ Sbjct 2 WEFGLLFLLVAILGVFLAKRFLP--CESDLASGTLLVTGVSPRPDDAHGEQFVTIAGFIS 59 Query 62 GPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFT 103 GPTV+EY+VY+RM VDV +WP +GQ+ PVVYSPKNPDNW F Sbjct 60 GPTVSEYSVYRRMVVDVGKWPAMGQLHPVVYSPKNPDNWKFA 101 >gi|254776439|ref|ZP_05217955.1| hypothetical protein MaviaA2_17469 [Mycobacterium avium subsp. avium ATCC 25291] Length=117 Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 76/100 (76%), Positives = 91/100 (91%), Gaps = 0/100 (0%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITG 62 WEFG+L++L+AVLAVFL R +PRGPRG+L SGTLLVTGVSPRP+A G+QYVTIAG+I G Sbjct 2 WEFGLLVLLVAVLAVFLVQRFVPRGPRGELLSGTLLVTGVSPRPEATGEQYVTIAGVING 61 Query 63 PTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 PTVNE+AVYQRMAVDV+QWPT+GQ+ PV+YS +NPDNW F Sbjct 62 PTVNEHAVYQRMAVDVNQWPTIGQLFPVLYSSENPDNWRF 101 >gi|296169209|ref|ZP_06850862.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896107|gb|EFG75774.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=117 Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 79/108 (74%), Positives = 95/108 (88%), Gaps = 0/108 (0%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITG 62 WEFGVLL+L+AVLAVFLA R +PRGPRG++ +GTLLVTGVSPRP+A G+Q+VT++G+I G Sbjct 10 WEFGVLLVLVAVLAVFLAQRFLPRGPRGEVLNGTLLVTGVSPRPEATGEQFVTVSGVING 69 Query 63 PTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPPVG 110 PTV+E+ VYQRMAVDVD WPT+GQ+ PVVYSPKNPDNW F P PP G Sbjct 70 PTVSEHPVYQRMAVDVDHWPTMGQLFPVVYSPKNPDNWRFAPPEPPPG 117 >gi|358233281|dbj|GAA46773.1| hypothetical protein NCGM2209_3417 [Mycobacterium tuberculosis NCGM2209] gi|379029478|dbj|BAL67211.1| hypothetical protein ERDMAN_3436 [Mycobacterium tuberculosis str. Erdman = ATCC 35801] Length=72 Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 71/72 (99%), Positives = 72/72 (100%), Gaps = 0/72 (0%) Query 39 VTGVSPRPDAGGQQYVTIAGIITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPD 98 +TGVSPRPDAGGQQYVTIAGIITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPD Sbjct 1 MTGVSPRPDAGGQQYVTIAGIITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPD 60 Query 99 NWTFTPNGPPVG 110 NWTFTPNGPPVG Sbjct 61 NWTFTPNGPPVG 72 >gi|408779970|ref|ZP_11191743.1| hypothetical protein MkanA1_04755 [Mycobacterium kansasii ATCC 12478] Length=113 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 75/102 (74%), Positives = 89/102 (88%), Gaps = 0/102 (0%) Query 1 VGWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII 60 +GWE GVLLIL+AVL VFLAPR P GPRG LASGTLLVTGVSPRPD G+Q+VTI+G++ Sbjct 1 MGWELGVLLILVAVLVVFLAPRFFPPGPRGALASGTLLVTGVSPRPDETGEQFVTISGVL 60 Query 61 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 GPT+NE++VY+RM V+V QWP +GQ+LPVVYSPKNPDNW F Sbjct 61 NGPTINEHSVYRRMVVEVSQWPAIGQVLPVVYSPKNPDNWNF 102 >gi|404424873|ref|ZP_11006407.1| hypothetical protein MFORT_29879 [Mycobacterium fortuitum subsp. fortuitum DSM 46621] gi|403650104|gb|EJZ05386.1| hypothetical protein MFORT_29879 [Mycobacterium fortuitum subsp. fortuitum DSM 46621] Length=110 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/107 (69%), Positives = 88/107 (83%), Gaps = 1/107 (0%) Query 3 WEFGVLLILIAVLAVFLAPRLIPR-GPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIIT 61 WE G+LL+L+ L + LAPR++ R G RG+LA GTLLVTGVSPRPDA G+Q+VTI G+IT Sbjct 2 WEIGILLLLVGALVLLLAPRIMQRRGIRGELAHGTLLVTGVSPRPDATGEQFVTITGVIT 61 Query 62 GPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGPP 108 GPTV+E+ VYQRMAVDVD+WPT+G +LPVVYSP NPD W FTP P Sbjct 62 GPTVSEHVVYQRMAVDVDKWPTMGALLPVVYSPGNPDKWAFTPEDAP 108 >gi|119867675|ref|YP_937627.1| hypothetical protein Mkms_1630 [Mycobacterium sp. KMS] gi|119693764|gb|ABL90837.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=113 Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 68/103 (67%), Positives = 83/103 (81%), Gaps = 2/103 (1%) Query 7 VLLILIAVLAVFLAPRLI-PRGPRGDLASGTLLVTGVSPRPD-AGGQQYVTIAGIITGPT 64 +LL+LI +AV AP ++ RGPRG+LA GTLLVTGVSPRPD G+Q+VTI+G+I GPT Sbjct 1 MLLLLIGAIAVLAAPWIMRSRGPRGELAQGTLLVTGVSPRPDDVTGEQFVTISGVINGPT 60 Query 65 VNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPNGP 107 V+E+ VYQRMAVDV+ WPT+G + PVVYSPKNPDNW F P P Sbjct 61 VDEHVVYQRMAVDVNNWPTMGALFPVVYSPKNPDNWNFAPPEP 103 >gi|357022175|ref|ZP_09084404.1| hypothetical protein KEK_19259 [Mycobacterium thermoresistibile ATCC 19527] gi|356478097|gb|EHI11236.1| hypothetical protein KEK_19259 [Mycobacterium thermoresistibile ATCC 19527] Length=118 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 68/105 (65%), Positives = 82/105 (79%), Gaps = 3/105 (2%) Query 3 WEFGVLLILIAVLAVFLAPRLIPR-GPRGD-LASGTLLVTGVSPRPDA-GGQQYVTIAGI 59 WE VL++LI + V AP + R G RGD +A GTLLVTGVSPRPD G+Q+VTI G+ Sbjct 2 WELAVLMLLIGAIVVLAAPWIRRRAGIRGDDVAHGTLLVTGVSPRPDGVTGEQFVTITGV 61 Query 60 ITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTP 104 I GPTVNE+ VYQRMAVDV+QWPT+GQ++PVVYS +NPDNW F P Sbjct 62 INGPTVNEHVVYQRMAVDVEQWPTMGQLIPVVYSARNPDNWHFAP 106 >gi|333991487|ref|YP_004524101.1| hypothetical protein JDM601_2847 [Mycobacterium sp. JDM601] gi|333487455|gb|AEF36847.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=106 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/101 (69%), Positives = 80/101 (80%), Gaps = 0/101 (0%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITG 62 WE LL+L+A+LAVF+APR GP + GTLL+TGVSPRPDA G QYVTI G+ITG Sbjct 2 WEIWALLLLLAILAVFVAPRFFRPGPGSEAQQGTLLITGVSPRPDAVGMQYVTITGVITG 61 Query 63 PTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFT 103 PTV E+ VYQR AVDVD WPTVG++LPVVYSP+NPDNW T Sbjct 62 PTVAEHEVYQRRAVDVDNWPTVGELLPVVYSPRNPDNWNLT 102 >gi|118471748|ref|YP_886445.1| hypothetical protein MSMEG_2084 [Mycobacterium smegmatis str. MC2 155] gi|399986455|ref|YP_006566804.1| hypothetical protein MSMEI_2038 [Mycobacterium smegmatis str. MC2 155] gi|118173035|gb|ABK73931.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] gi|399231016|gb|AFP38509.1| hypothetical protein MSMEI_2038 [Mycobacterium smegmatis str. MC2 155] Length=126 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/104 (65%), Positives = 82/104 (79%), Gaps = 1/104 (0%) Query 3 WEFGVLLILIAVLAVFLAPRLIPR-GPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIIT 61 WEFG+LL+L+ L + LAPR++ R G GDL GTLLVTGVSPRPDA G+Q+VTI G+I+ Sbjct 2 WEFGILLLLVGALVLLLAPRIMRRRGMGGDLTQGTLLVTGVSPRPDAEGEQFVTITGVIS 61 Query 62 GPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPN 105 GPTV E+ VYQRMAVDV+ WP++G + PVVYSP NPD W F P Sbjct 62 GPTVREHVVYQRMAVDVNDWPSMGALFPVVYSPSNPDKWAFAPT 105 >gi|374611915|ref|ZP_09684698.1| hypothetical protein MyctuDRAFT_4752 [Mycobacterium tusciae JS617] gi|373548559|gb|EHP75250.1| hypothetical protein MyctuDRAFT_4752 [Mycobacterium tusciae JS617] Length=116 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/105 (62%), Positives = 79/105 (76%), Gaps = 3/105 (2%) Query 7 VLLILIAVLAVFLAPRLIPRGPRG-DLASGTLLVTGVSPRP-DAGGQQYVTIAGIITGPT 64 +L+++ VLA+ AP ++ R G D G LLVTGVSPRP D G+Q+VTI G+I GPT Sbjct 1 MLVVMFGVLALIAAPWIMRRRRTGSDWMEGQLLVTGVSPRPTDVTGEQFVTITGVINGPT 60 Query 65 VNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFTPN-GPP 108 VNE+ +YQRMAVDVDQWPT+ Q+ PVVYSPKNPDNW F P GPP Sbjct 61 VNEHVIYQRMAVDVDQWPTMSQLFPVVYSPKNPDNWRFAPQAGPP 105 >gi|126434174|ref|YP_001069865.1| hypothetical protein Mjls_1576 [Mycobacterium sp. JLS] gi|126233974|gb|ABN97374.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=96 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/86 (71%), Positives = 71/86 (83%), Gaps = 1/86 (1%) Query 26 RGPRGDLASGTLLVTGVSPRPD-AGGQQYVTIAGIITGPTVNEYAVYQRMAVDVDQWPTV 84 RGPRG+LA GTLLVTGVSPRPD G+Q+VTI+G+I GPTV+E+ VYQRMAVDV+ WPT+ Sbjct 4 RGPRGELAQGTLLVTGVSPRPDDVTGEQFVTISGVINGPTVDEHVVYQRMAVDVNNWPTM 63 Query 85 GQILPVVYSPKNPDNWTFTPNGPPVG 110 G + PVVYSPKNPDNW F P P G Sbjct 64 GALFPVVYSPKNPDNWNFAPPEPTDG 89 >gi|306790364|ref|ZP_07428686.1| hypothetical protein TMDG_01968 [Mycobacterium tuberculosis SUMu004] gi|308333185|gb|EFP22036.1| hypothetical protein TMDG_01968 [Mycobacterium tuberculosis SUMu004] Length=63 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/63 (99%), Positives = 63/63 (100%), Gaps = 0/63 (0%) Query 1 VGWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII 60 +GWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII Sbjct 1 MGWEFGVLLILIAVLAVFLAPRLIPRGPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII 60 Query 61 TGP 63 TGP Sbjct 61 TGP 63 >gi|407982833|ref|ZP_11163498.1| hypothetical protein C731_1450 [Mycobacterium hassiacum DSM 44199] gi|407375564|gb|EKF24515.1| hypothetical protein C731_1450 [Mycobacterium hassiacum DSM 44199] Length=111 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 56/83 (68%), Positives = 67/83 (81%), Gaps = 1/83 (1%) Query 21 PRLIPR-GPRGDLASGTLLVTGVSPRPDAGGQQYVTIAGIITGPTVNEYAVYQRMAVDVD 79 PR++ R G G+ A GTLLVTGVSP+PD G+Q+VTI G+I GPTVNE+ VYQRMAVDVD Sbjct 19 PRIMRRRGIPGEQAVGTLLVTGVSPKPDVAGEQFVTITGVINGPTVNEHVVYQRMAVDVD 78 Query 80 QWPTVGQILPVVYSPKNPDNWTF 102 WP +G ++PVVYSP NPDNW F Sbjct 79 NWPRIGDLIPVVYSPNNPDNWRF 101 >gi|392415429|ref|YP_006452034.1| hypothetical protein Mycch_1555 [Mycobacterium chubuense NBB4] gi|390615205|gb|AFM16355.1| hypothetical protein Mycch_1555 [Mycobacterium chubuense NBB4] Length=119 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/101 (59%), Positives = 75/101 (75%), Gaps = 2/101 (1%) Query 4 EFGVLLILIAVLAVFLAPRLIPR-GPRGDLASGTLLVTGVSPRPDA-GGQQYVTIAGIIT 61 EF ++L++I +AV AP ++ R G D GTLLVTGVSPRPD GQQ+VTI+G+I Sbjct 3 EFVIMLLIIGAIAVVAAPWIMRRRGAGDDWVQGTLLVTGVSPRPDGVTGQQFVTISGVIN 62 Query 62 GPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 GPTV E+ VY RMAVDVD WP++G ++ VVYSP+NPD W F Sbjct 63 GPTVAEHVVYARMAVDVDDWPSMGALMDVVYSPRNPDKWGF 103 >gi|375137432|ref|YP_004998081.1| hypothetical protein [Mycobacterium rhodesiae NBB3] gi|359818053|gb|AEV70866.1| hypothetical protein MycrhN_0223 [Mycobacterium rhodesiae NBB3] Length=115 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 58/98 (60%), Positives = 72/98 (74%), Gaps = 2/98 (2%) Query 7 VLLILIAVLAVFLAPRLIPR-GPRGDLASGTLLVTGVSPRPDA-GGQQYVTIAGIITGPT 64 ++LI++ VL AP ++ R G D G LLVTGVSPRPD G+ VTI G+I GPT Sbjct 1 MVLIMVGVLVAIAAPWIMRRRGAGSDWMQGQLLVTGVSPRPDGVTGEHLVTITGVINGPT 60 Query 65 VNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 VNE+ VYQ++A+DVDQWPT+GQ+ VVYSPKNPDNW F Sbjct 61 VNEHVVYQQLAIDVDQWPTMGQLFGVVYSPKNPDNWRF 98 >gi|120402906|ref|YP_952735.1| hypothetical protein Mvan_1909 [Mycobacterium vanbaalenii PYR-1] gi|119955724|gb|ABM12729.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=126 Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 60/102 (59%), Positives = 75/102 (74%), Gaps = 2/102 (1%) Query 3 WEFGVLLILIAVLAVFLAPRLIPR-GPRGDLASGTLLVTGVSPRPDA-GGQQYVTIAGII 60 +EF ++L+L+ L + P L+ R G D A GTLLVTGVSPRPD G+Q+VTI G+I Sbjct 9 FEFAMILLLVGALVLLARPFLMRRRGVGSDWAQGTLLVTGVSPRPDGVSGEQFVTITGVI 68 Query 61 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 GPTVNEY VY RM VDVD WPT+GQ++PV+YSP NP+ W F Sbjct 69 NGPTVNEYTVYTRMTVDVDDWPTMGQLIPVMYSPGNPEKWAF 110 >gi|383820471|ref|ZP_09975727.1| hypothetical protein MPHLEI_14107 [Mycobacterium phlei RIVM601174] gi|383334861|gb|EID13294.1| hypothetical protein MPHLEI_14107 [Mycobacterium phlei RIVM601174] Length=119 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/75 (67%), Positives = 56/75 (75%), Gaps = 1/75 (1%) Query 31 DLASGTLLVTGVSPRPDA-GGQQYVTIAGIITGPTVNEYAVYQRMAVDVDQWPTVGQILP 89 D +G LLVTGVSPRP+ G QYVTI G+I GPTVNE+ VYQRM DVD WP +G + P Sbjct 31 DWPAGQLLVTGVSPRPEGVTGPQYVTITGVINGPTVNEHVVYQRMEADVDAWPKMGDLYP 90 Query 90 VVYSPKNPDNWTFTP 104 VVYSP NPDNW F P Sbjct 91 VVYSPSNPDNWRFAP 105 >gi|404442034|ref|ZP_11007216.1| hypothetical protein MVAC_02444 [Mycobacterium vaccae ATCC 25954] gi|403657661|gb|EJZ12427.1| hypothetical protein MVAC_02444 [Mycobacterium vaccae ATCC 25954] Length=131 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 49/78 (63%), Positives = 57/78 (74%), Gaps = 1/78 (1%) Query 26 RGPRGDLASGTLLVTGVSPRPDA-GGQQYVTIAGIITGPTVNEYAVYQRMAVDVDQWPTV 84 RG D G LLVTGVSPRPD G+Q+VTI G+I GPTVNEY VY RM DVD WPT+ Sbjct 26 RGVGNDWVPGMLLVTGVSPRPDGVTGEQFVTITGVINGPTVNEYTVYTRMTADVDNWPTM 85 Query 85 GQILPVVYSPKNPDNWTF 102 GQ++ V+YSP NP+ W F Sbjct 86 GQLMDVMYSPGNPEKWAF 103 >gi|407647632|ref|YP_006811391.1| hypothetical protein O3I_032340 [Nocardia brasiliensis ATCC 700358] gi|407310516|gb|AFU04417.1| hypothetical protein O3I_032340 [Nocardia brasiliensis ATCC 700358] Length=138 Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 51/100 (51%), Positives = 69/100 (69%), Gaps = 2/100 (2%) Query 4 EFGVLLILIAVLAVFLAPRLIPRGPR--GDLASGTLLVTGVSPRPDAGGQQYVTIAGIIT 61 EFG+LLI++ +A + L RG +GTL VTGVSPRPDA G+QYVTI G +T Sbjct 3 EFGMLLIMVLAVAGMVVLYLRGRGGFRPTQAEAGTLYVTGVSPRPDAQGEQYVTITGNLT 62 Query 62 GPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWT 101 GP+V+ VY R A DV+ WP++G ++ VVYSP+NP +W+ Sbjct 63 GPSVSGAVVYGRFAWDVNAWPSIGDLIDVVYSPRNPQSWS 102 >gi|145225032|ref|YP_001135710.1| hypothetical protein Mflv_4453 [Mycobacterium gilvum PYR-GCK] gi|145217518|gb|ABP46922.1| hypothetical protein Mflv_4453 [Mycobacterium gilvum PYR-GCK] Length=125 Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 45/69 (66%), Positives = 55/69 (80%), Gaps = 1/69 (1%) Query 35 GTLLVTGVSPRPDA-GGQQYVTIAGIITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYS 93 GTLLVTGVSPRPD G+Q+VTI G+I GPTVNEY VY RM DV+ WPT+GQ++ V+Y+ Sbjct 35 GTLLVTGVSPRPDGVSGEQFVTITGVINGPTVNEYTVYTRMTSDVNSWPTMGQLIDVMYN 94 Query 94 PKNPDNWTF 102 P NP+ W F Sbjct 95 PGNPEKWAF 103 >gi|378821252|ref|ZP_09844164.1| hypothetical protein O3I_41110, partial [Nocardia brasiliensis ATCC 700358] gi|378588115|gb|EHY21981.1| hypothetical protein O3I_41110, partial [Nocardia brasiliensis ATCC 700358] Length=104 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/100 (51%), Positives = 69/100 (69%), Gaps = 2/100 (2%) Query 4 EFGVLLILIAVLAVFLAPRLIPRGPR--GDLASGTLLVTGVSPRPDAGGQQYVTIAGIIT 61 EFG+LLI++ +A + L RG +GTL VTGVSPRPDA G+QYVTI G +T Sbjct 3 EFGMLLIMVLAVAGMVVLYLRGRGGFRPTQAEAGTLYVTGVSPRPDAQGEQYVTITGNLT 62 Query 62 GPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWT 101 GP+V+ VY R A DV+ WP++G ++ VVYSP+NP +W+ Sbjct 63 GPSVSGAVVYGRFAWDVNAWPSIGDLIDVVYSPRNPQSWS 102 >gi|315445401|ref|YP_004078280.1| hypothetical protein Mspyr1_38520 [Mycobacterium gilvum Spyr1] gi|315263704|gb|ADU00446.1| hypothetical protein Mspyr1_38520 [Mycobacterium gilvum Spyr1] Length=120 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 45/69 (66%), Positives = 54/69 (79%), Gaps = 1/69 (1%) Query 35 GTLLVTGVSPRPDA-GGQQYVTIAGIITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYS 93 GTLLVTGVSPRPD G+Q+VTI G+I GPTVNEY VY RM DV+ WPT+GQ++ V+Y Sbjct 30 GTLLVTGVSPRPDGVSGEQFVTITGVINGPTVNEYTVYTRMTSDVNSWPTMGQLIDVMYD 89 Query 94 PKNPDNWTF 102 P NP+ W F Sbjct 90 PGNPEKWAF 98 >gi|392065707|gb|EIT91555.1| hypothetical protein MA4S0726RB_2885 [Mycobacterium abscessus 4S-0726-RB] gi|392113108|gb|EIU38877.1| hypothetical protein MA6G0125R_2633 [Mycobacterium abscessus 6G-0125-R] gi|392129513|gb|EIU55260.1| hypothetical protein MA6G1108_3600 [Mycobacterium abscessus 6G-1108] gi|392163013|gb|EIU88702.1| hypothetical protein MA6G0212_3660 [Mycobacterium abscessus 6G-0212] gi|392169115|gb|EIU94793.1| hypothetical protein MA6G0728R_3603 [Mycobacterium abscessus 6G-0728-R] gi|392199857|gb|EIV25465.1| hypothetical protein MA3A0122R_3748 [Mycobacterium abscessus 3A-0122-R] gi|392207663|gb|EIV33240.1| hypothetical protein MA3A0122S_3263 [Mycobacterium abscessus 3A-0122-S] gi|392234038|gb|EIV59536.1| hypothetical protein MA4S0116S_2432 [Mycobacterium abscessus 4S-0116-S] Length=173 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 49/103 (48%), Positives = 65/103 (64%), Gaps = 3/103 (2%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRG--PRGDLASGTLLVTGVSPRPDA-GGQQYVTIAGI 59 WEF VLL++ LA+ + R P + GTLLVTGVSPRP+ G+Q VTI G Sbjct 9 WEFLVLLLIGGSLALLIMQMRRGRQAQPGMNAVQGTLLVTGVSPRPEGVTGEQLVTITGA 68 Query 60 ITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 + GPTV EY Y+++ DV+ WP +G ++PV+Y PKNPD W Sbjct 69 LNGPTVAEYITYRQIVRDVNDWPRIGDLIPVLYPPKNPDRWNI 111 >gi|169630565|ref|YP_001704214.1| hypothetical protein MAB_3484c [Mycobacterium abscessus ATCC 19977] gi|169242532|emb|CAM63560.1| Conserved hypothetical protein [Mycobacterium abscessus] gi|392063713|gb|EIT89562.1| hypothetical protein MA4S0303_3361 [Mycobacterium abscessus 4S-0303] 7 more sequence titles Length=166 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 49/103 (48%), Positives = 65/103 (64%), Gaps = 3/103 (2%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRG--PRGDLASGTLLVTGVSPRPDA-GGQQYVTIAGI 59 WEF VLL++ LA+ + R P + GTLLVTGVSPRP+ G+Q VTI G Sbjct 2 WEFLVLLLIGGSLALLIMQMRRGRQAQPGMNAVQGTLLVTGVSPRPEGVTGEQLVTITGA 61 Query 60 ITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 + GPTV EY Y+++ DV+ WP +G ++PV+Y PKNPD W Sbjct 62 LNGPTVAEYITYRQIVRDVNDWPRIGDLIPVLYPPKNPDRWNI 104 >gi|392078695|gb|EIU04522.1| hypothetical protein MA5S0422_4071 [Mycobacterium abscessus 5S-0422] gi|392080121|gb|EIU05947.1| hypothetical protein MA5S0421_3152 [Mycobacterium abscessus 5S-0421] gi|392086330|gb|EIU12155.1| hypothetical protein MA5S0304_2897 [Mycobacterium abscessus 5S-0304] gi|392095297|gb|EIU21092.1| hypothetical protein MA5S0708_2824 [Mycobacterium abscessus 5S-0708] gi|392097688|gb|EIU23482.1| hypothetical protein MA5S0817_2443 [Mycobacterium abscessus 5S-0817] gi|392105076|gb|EIU30862.1| hypothetical protein MA5S1212_2580 [Mycobacterium abscessus 5S-1212] gi|392119083|gb|EIU44851.1| hypothetical protein MA5S1215_2930 [Mycobacterium abscessus 5S-1215] gi|392162063|gb|EIU87753.1| hypothetical protein MA5S0921_3851 [Mycobacterium abscessus 5S-0921] Length=173 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/103 (48%), Positives = 65/103 (64%), Gaps = 3/103 (2%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRG--PRGDLASGTLLVTGVSPRPDA-GGQQYVTIAGI 59 WEF VLL++ LA+ + R P + GTLLVTGVSPRP+ G+Q VTI G Sbjct 9 WEFLVLLLIGGSLALLIMQMRRGRQAQPGMNAVQGTLLVTGVSPRPEGVTGEQLVTITGA 68 Query 60 ITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 + GPTV EY Y+++ DV+ WP +G ++PV+Y PKNPD W Sbjct 69 LNGPTVAEYITYRQIVRDVNDWPRIGDLIPVLYPPKNPDRWNI 111 >gi|353451841|gb|EHC00235.1| hypothetical protein MAB47J26_01950 [Mycobacterium abscessus 47J26] gi|392137478|gb|EIU63215.1| hypothetical protein MM1S1510930_3555 [Mycobacterium massiliense 1S-151-0930] gi|392143300|gb|EIU69025.1| hypothetical protein MM1S1520914_3761 [Mycobacterium massiliense 1S-152-0914] gi|392148077|gb|EIU73795.1| hypothetical protein MM1S1530915_3105 [Mycobacterium massiliense 1S-153-0915] gi|392152057|gb|EIU77764.1| hypothetical protein MM2B0626_3383 [Mycobacterium massiliense 2B-0626] gi|392154690|gb|EIU80396.1| hypothetical protein MM1S1540310_3112 [Mycobacterium massiliense 1S-154-0310] gi|392251149|gb|EIV76622.1| hypothetical protein MM2B0107_2724 [Mycobacterium massiliense 2B-0107] Length=173 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/103 (48%), Positives = 65/103 (64%), Gaps = 3/103 (2%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRG--PRGDLASGTLLVTGVSPRPDA-GGQQYVTIAGI 59 WEF VLL++ LA+ + R P + GTLLVTGVSPRP+ G+Q VTI G Sbjct 9 WEFLVLLLIGGSLALLIMQMRRGRQAQPGMNAVQGTLLVTGVSPRPEGVTGEQLVTITGA 68 Query 60 ITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 + GPTV EY Y+++ DV+ WP +G ++PV+Y PKNPD W Sbjct 69 LNGPTVAEYITYRQIVRDVNDWPRIGDLIPVLYPPKNPDRWNI 111 >gi|382939644|gb|EIC63971.1| hypothetical protein S7W_21256 [Mycobacterium abscessus M94] gi|382943104|gb|EIC67418.1| hypothetical protein OUW_06788 [Mycobacterium abscessus M93] gi|392239112|gb|EIV64605.1| hypothetical protein MMCCUG48898_3517 [Mycobacterium massiliense CCUG 48898] Length=173 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/103 (48%), Positives = 65/103 (64%), Gaps = 3/103 (2%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRG--PRGDLASGTLLVTGVSPRPDA-GGQQYVTIAGI 59 WEF VLL++ LA+ + R P + GTLLVTGVSPRP+ G+Q VTI G Sbjct 9 WEFLVLLLIGGSLALLIMQMRRGRQAQPGMNAVQGTLLVTGVSPRPEGVTGEQLVTITGA 68 Query 60 ITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 + GPTV EY Y+++ DV+ WP +G ++PV+Y PKNPD W Sbjct 69 LNGPTVAEYITYRQIVRDVNDWPRIGDLIPVLYPPKNPDRWNI 111 >gi|392177821|gb|EIV03474.1| hypothetical protein MM2B0912R_3701 [Mycobacterium massiliense 2B-0912-R] gi|392179368|gb|EIV05020.1| hypothetical protein MM2B0307_2688 [Mycobacterium massiliense 2B-0307] gi|392192265|gb|EIV17889.1| hypothetical protein MM2B0912S_3389 [Mycobacterium massiliense 2B-0912-S] gi|392246040|gb|EIV71517.1| hypothetical protein MM2B1231_3447 [Mycobacterium massiliense 2B-1231] Length=166 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 49/103 (48%), Positives = 65/103 (64%), Gaps = 3/103 (2%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRG--PRGDLASGTLLVTGVSPRPDA-GGQQYVTIAGI 59 WEF VLL++ LA+ + R P + GTLLVTGVSPRP+ G+Q VTI G Sbjct 2 WEFLVLLLIGGSLALLIMQMRRGRQAQPGMNAVQGTLLVTGVSPRPEGVTGEQLVTITGA 61 Query 60 ITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 + GPTV EY Y+++ DV+ WP +G ++PV+Y PKNPD W Sbjct 62 LNGPTVAEYITYRQIVRDVNDWPRIGDLIPVLYPPKNPDRWNI 104 >gi|363995527|gb|EHM16744.1| hypothetical protein MBOL_33300 [Mycobacterium abscessus subsp. bolletii BD] Length=173 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 49/103 (48%), Positives = 65/103 (64%), Gaps = 3/103 (2%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRG--PRGDLASGTLLVTGVSPRPDA-GGQQYVTIAGI 59 WEF VLL++ LA+ + R P + GTLLVTGVSPRP+ G+Q VTI G Sbjct 9 WEFLVLLLIGGSLALLIMQMRRGRQAQPGMNAVQGTLLVTGVSPRPEGVTGEQLVTITGA 68 Query 60 ITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 + GPTV EY Y+++ DV+ WP +G ++PV+Y PKNPD W Sbjct 69 LNGPTVAEYITYRQIVRDVNDWPRIGDLIPVLYPPKNPDRWNI 111 >gi|365871425|ref|ZP_09410966.1| hypothetical protein MMAS_33680 [Mycobacterium massiliense CCUG 48898] gi|363995228|gb|EHM16446.1| hypothetical protein MMAS_33680 [Mycobacterium massiliense CCUG 48898] Length=166 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 49/103 (48%), Positives = 65/103 (64%), Gaps = 3/103 (2%) Query 3 WEFGVLLILIAVLAVFLAPRLIPRG--PRGDLASGTLLVTGVSPRPDA-GGQQYVTIAGI 59 WEF VLL++ LA+ + R P + GTLLVTGVSPRP+ G+Q VTI G Sbjct 2 WEFLVLLLIGGSLALLIMQMRRGRQAQPGMNAVQGTLLVTGVSPRPEGVTGEQLVTITGA 61 Query 60 ITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTF 102 + GPTV EY Y+++ DV+ WP +G ++PV+Y PKNPD W Sbjct 62 LNGPTVAEYITYRQIVRDVNDWPRIGDLIPVLYPPKNPDRWNI 104 >gi|379710182|ref|YP_005265387.1| hypothetical protein NOCYR_3992 [Nocardia cyriacigeorgica GUH-2] gi|374847681|emb|CCF64753.1| conserved protein of unknown function [Nocardia cyriacigeorgica GUH-2] Length=106 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/102 (51%), Positives = 61/102 (60%), Gaps = 7/102 (6%) Query 4 EFGVLLILIAVLAVFLAPRLIPRGPRGDLAS----GTLLVTGVSPRPD-AGGQQYVTIAG 58 EF +L+I+I LA +A L RG RG S GTL VTGVSPRPD G+QYVTI G Sbjct 3 EFAMLVIMIGALAGMIA--LYLRGRRGVRLSEPEVGTLYVTGVSPRPDDLTGEQYVTITG 60 Query 59 IITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNW 100 +TGP V VY R A DV+ WP++G V Y P PD W Sbjct 61 NLTGPMVEGTVVYGRFAWDVNNWPSIGDTFTVAYPPGKPDKW 102 >gi|392223301|gb|EIV48823.1| hypothetical protein MA3A0930R_3725 [Mycobacterium abscessus 3A-0930-R] gi|392224405|gb|EIV49926.1| hypothetical protein MA3A0930S_3657 [Mycobacterium abscessus 3A-0930-S] gi|392250509|gb|EIV75983.1| hypothetical protein MM3A0810R_3760 [Mycobacterium abscessus 3A-0810-R] Length=161 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 39/70 (56%), Positives = 50/70 (72%), Gaps = 1/70 (1%) Query 34 SGTLLVTGVSPRPDA-GGQQYVTIAGIITGPTVNEYAVYQRMAVDVDQWPTVGQILPVVY 92 GTLLVTGVSPRP+ G+Q VTI G + GPTV EY Y+++ DV+ WP +G ++PV+Y Sbjct 30 QGTLLVTGVSPRPEGVTGEQLVTITGALNGPTVAEYITYRQIVRDVNDWPRIGDLIPVLY 89 Query 93 SPKNPDNWTF 102 PKNPD W Sbjct 90 PPKNPDRWNI 99 >gi|54026233|ref|YP_120475.1| hypothetical protein nfa42620 [Nocardia farcinica IFM 10152] gi|54017741|dbj|BAD59111.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=114 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 46/108 (43%), Positives = 61/108 (57%), Gaps = 4/108 (3%) Query 4 EFGVLLILIAVLAVFLAPRLIPRG---PRGDLASGTLLVTGVSPRPDAGGQQYVTIAGII 60 EF +LL+++ VL L RG P + G+L +TGVSPRP+A G+Q+VTI G + Sbjct 6 EFAMLLMMVTVLVALLVAYRRGRGGAVPPAEPEHGSLRITGVSPRPEAMGEQFVTITGTL 65 Query 61 TGPTVNEYAVYQRMAVDVDQWPTVGQILPVVYSPKNPDNWTFT-PNGP 107 +GP+V VY R D WP +G LPV+Y PD W P GP Sbjct 66 SGPSVPGTVVYGRFVWDGAYWPQIGDELPVIYPAGKPDRWQLVRPAGP 113 >gi|403724385|ref|ZP_10946023.1| hypothetical protein GORHZ_098_00020 [Gordonia rhizosphera NBRC 16068] gi|403205595|dbj|GAB90354.1| hypothetical protein GORHZ_098_00020 [Gordonia rhizosphera NBRC 16068] Length=132 Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/78 (44%), Positives = 44/78 (57%), Gaps = 5/78 (6%) Query 30 GDLASGTLLVTGVSPRP---DAGGQQYVTIAGIITGPTVNEYAVYQRMAV-DVDQWPTVG 85 G GTL +TGVS RP DA G+++ T++G I GP N VY + + D + WP +G Sbjct 37 GQFVQGTLTITGVSDRPELGDAKGERFCTLSGTIVGPQTNPAEVYGTLVLGDAEPWPAIG 96 Query 86 QILPVVYSP-KNPDNWTF 102 LPVVY P K W F Sbjct 97 ADLPVVYKPGKATSTWQF 114 >gi|377563642|ref|ZP_09792981.1| hypothetical protein GOSPT_034_00130 [Gordonia sputi NBRC 100414] gi|377529089|dbj|GAB38146.1| hypothetical protein GOSPT_034_00130 [Gordonia sputi NBRC 100414] Length=129 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/117 (39%), Positives = 61/117 (53%), Gaps = 15/117 (12%) Query 7 VLLILIAVLAVFLAPRLIPRGPRGD----LASGTLLVTGVSPR--PDAGGQQYVTIAGII 60 V+L+++AV+A+ + R G G A GTL VTGVS + PD+ GQ + TI+G I Sbjct 7 VILLVVAVIAMIMRFRGQRIGGFGGNTAGYAQGTLTVTGVSDQGEPDSKGQAFCTISGTI 66 Query 61 TGPTVNEYAVYQRMAVDVDQ-WPTVGQILPVVYSP-KNPDNWTF-------TPNGPP 108 GP N VY M + V + WP +G VVY P K W+F P+ PP Sbjct 67 NGPGTNPTEVYGTMILAVGEPWPQIGSEHAVVYKPGKTATTWSFGQLPPMQAPDAPP 123 Lambda K H 0.320 0.143 0.456 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 178419429504 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Oct 14, 2012 4:13 PM Number of letters in database: 7,218,481,314 Number of sequences in database: 21,062,489 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40