BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 21,062,489 sequences; 7,218,481,314 total letters Query= Rv3144c Rv3144c PPE family protein PPE52 3510088:3511317 reverse MW:39036 Length=409 Score E Sequences producing significant alignments: (Bits) Value gi|15842720|ref|NP_337757.1| PPE family protein [Mycobacterium t... 767 0.0 gi|57117066|ref|YP_177936.1| PPE family protein [Mycobacterium t... 766 0.0 gi|31794320|ref|NP_856813.1| PPE family protein [Mycobacterium b... 765 0.0 gi|340628120|ref|YP_004746572.1| PPE-family protein [Mycobacteri... 762 0.0 gi|253800178|ref|YP_003033179.1| PPE family protein [Mycobacteri... 758 0.0 gi|289759273|ref|ZP_06518651.1| ppe-family protein [Mycobacteriu... 576 3e-162 gi|306782186|ref|ZP_07420523.1| PPE family protein [Mycobacteriu... 572 8e-161 gi|289746953|ref|ZP_06506331.1| PPE family protein [Mycobacteriu... 551 1e-154 gi|289755263|ref|ZP_06514641.1| predicted protein [Mycobacterium... 514 2e-143 gi|289763327|ref|ZP_06522705.1| PPE family protein [Mycobacteriu... 347 2e-93 gi|289751821|ref|ZP_06511199.1| PPE family protein [Mycobacteriu... 345 8e-93 gi|408781005|ref|ZP_11192778.1| PPE family protein [Mycobacteriu... 339 7e-91 gi|386005990|ref|YP_005924269.1| PPE family protein [Mycobacteri... 313 6e-83 gi|183981499|ref|YP_001849790.1| PPE family protein [Mycobacteri... 256 6e-66 gi|183981484|ref|YP_001849775.1| PPE family protein [Mycobacteri... 229 6e-58 gi|183985015|ref|YP_001853306.1| PPE family protein [Mycobacteri... 229 1e-57 gi|183981425|ref|YP_001849716.1| PPE family protein [Mycobacteri... 221 3e-55 gi|289440962|ref|ZP_06430706.1| PPE family protein [Mycobacteriu... 213 5e-53 gi|15843145|ref|NP_338182.1| PPE family protein [Mycobacterium t... 213 5e-53 gi|379029917|dbj|BAL67650.1| PPE family protein [Mycobacterium t... 213 6e-53 gi|340628497|ref|YP_004746949.1| PPE family protein [Mycobacteri... 212 1e-52 gi|183981160|ref|YP_001849451.1| PPE family protein [Mycobacteri... 204 3e-50 gi|118616670|ref|YP_905002.1| PPE family protein [Mycobacterium ... 204 4e-50 gi|408780984|ref|ZP_11192757.1| PPE family protein [Mycobacteriu... 201 2e-49 gi|118616724|ref|YP_905056.1| PPE family protein [Mycobacterium ... 200 4e-49 gi|408781103|ref|ZP_11192876.1| PPE family protein [Mycobacteriu... 199 9e-49 gi|408781745|ref|ZP_11193518.1| PPE family protein [Mycobacteriu... 199 1e-48 gi|306778415|ref|ZP_07416752.1| PPE family protein [Mycobacteriu... 197 4e-48 gi|289763711|ref|ZP_06523089.1| PPE family protein [Mycobacteriu... 197 4e-48 gi|408781100|ref|ZP_11192873.1| PPE family protein [Mycobacteriu... 197 4e-48 gi|306791127|ref|ZP_07429429.1| putative PPE family protein [Myc... 196 7e-48 gi|408784131|ref|ZP_11195904.1| PPE family protein [Mycobacteriu... 191 4e-46 gi|408784271|ref|ZP_11196044.1| PPE family protein [Mycobacteriu... 189 9e-46 gi|183984524|ref|YP_001852815.1| PPE family protein [Mycobacteri... 189 1e-45 gi|408780986|ref|ZP_11192759.1| PPE family protein [Mycobacteriu... 188 2e-45 gi|408780124|ref|ZP_11191897.1| PPE family protein [Mycobacteriu... 187 3e-45 gi|183984289|ref|YP_001852580.1| PPE family protein [Mycobacteri... 187 3e-45 gi|408784772|ref|ZP_11196545.1| PPE family protein, partial [Myc... 186 6e-45 gi|183984190|ref|YP_001852481.1| PPE family protein [Mycobacteri... 184 3e-44 gi|340628135|ref|YP_004746587.1| PPE family protein [Mycobacteri... 182 1e-43 gi|379029502|dbj|BAL67235.1| PPE family protein [Mycobacterium t... 182 2e-43 gi|15842735|ref|NP_337772.1| PPE family protein [Mycobacterium t... 182 2e-43 gi|289755278|ref|ZP_06514656.1| predicted protein [Mycobacterium... 182 2e-43 gi|298526633|ref|ZP_07014042.1| predicted protein [Mycobacterium... 181 2e-43 gi|289763736|ref|ZP_06523114.1| PPE family protein [Mycobacteriu... 181 3e-43 gi|297636230|ref|ZP_06954010.1| PPE family protein [Mycobacteriu... 181 3e-43 gi|148824764|ref|YP_001289518.1| PPE family protein [Mycobacteri... 181 3e-43 gi|253800599|ref|YP_003033600.1| PPE family protein [Mycobacteri... 181 3e-43 gi|121639042|ref|YP_979266.1| PPE family protein [Mycobacterium ... 179 7e-43 gi|289746971|ref|ZP_06506349.1| PPE family protein [Mycobacteriu... 179 1e-42 >gi|15842720|ref|NP_337757.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|148662999|ref|YP_001284522.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148824338|ref|YP_001289092.1| PPE family protein [Mycobacterium tuberculosis F11] 31 more sequence titles Length=409 Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/409 (99%), Positives = 409/409 (100%), Gaps = 0/409 (0%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +SFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP Sbjct 1 MSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL Sbjct 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA Sbjct 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 Query 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH Sbjct 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 Query 241 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA 300 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA Sbjct 241 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA 300 Query 301 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIP 360 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIP Sbjct 301 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIP 360 Query 361 ESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG 409 ESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG Sbjct 361 ESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG 409 >gi|57117066|ref|YP_177936.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|38490331|emb|CAE55560.1| PPE-FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=409 Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/409 (99%), Positives = 408/409 (99%), Gaps = 0/409 (0%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +SFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP Sbjct 1 MSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL Sbjct 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA Sbjct 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 Query 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVG GVASAGLAAGDPAH Sbjct 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGSGVASAGLAAGDPAH 240 Query 241 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA 300 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA Sbjct 241 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA 300 Query 301 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIP 360 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIP Sbjct 301 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIP 360 Query 361 ESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG 409 ESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG Sbjct 361 ESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG 409 >gi|31794320|ref|NP_856813.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121639027|ref|YP_979251.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991519|ref|YP_002646208.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] 25 more sequence titles Length=409 Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/409 (99%), Positives = 409/409 (100%), Gaps = 0/409 (0%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +SFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP Sbjct 1 MSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL Sbjct 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA Sbjct 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 Query 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH Sbjct 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 Query 241 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA 300 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA Sbjct 241 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA 300 Query 301 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIP 360 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIP Sbjct 301 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIP 360 Query 361 ESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG 409 ESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVR+DPKIQMRGG Sbjct 361 ESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRQDPKIQMRGG 409 >gi|340628120|ref|YP_004746572.1| PPE-family protein [Mycobacterium canettii CIPT 140010059] gi|340006310|emb|CCC45489.1| PPE-family protein [Mycobacterium canettii CIPT 140010059] Length=409 Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/409 (99%), Positives = 408/409 (99%), Gaps = 0/409 (0%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +SFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP Sbjct 1 MSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL Sbjct 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA Sbjct 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 Query 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH Sbjct 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 Query 241 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA 300 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPG A Sbjct 241 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGPA 300 Query 301 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIP 360 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIP Sbjct 301 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIP 360 Query 361 ESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG 409 ESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVR+DPKIQMRGG Sbjct 361 ESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRQDPKIQMRGG 409 >gi|253800178|ref|YP_003033179.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|308232347|ref|ZP_07415798.2| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308371243|ref|ZP_07424329.2| PPE family protein [Mycobacterium tuberculosis SUMu003] 10 more sequence titles Length=405 Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/405 (99%), Positives = 405/405 (100%), Gaps = 0/405 (0%) Query 5 VLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGPAALA 64 +LPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGPAALA Sbjct 1 MLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGPAALA 60 Query 65 MAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQLVMTN 124 MAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQLVMTN Sbjct 61 MAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQLVMTN 120 Query 125 LFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGAGATG 184 LFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGAGATG Sbjct 121 LFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGAGATG 180 Query 185 ATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAHGSVG 244 ATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAHGSVG Sbjct 181 ATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAHGSVG 240 Query 245 QGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTATESA 304 QGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTATESA Sbjct 241 QGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTATESA 300 Query 305 RAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIPESTL 364 RAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIPESTL Sbjct 301 RAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGSGIPESTL 360 Query 365 RTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG 409 RTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG Sbjct 361 RTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG 405 >gi|289759273|ref|ZP_06518651.1| ppe-family protein [Mycobacterium tuberculosis T85] gi|289714837|gb|EFD78849.1| ppe-family protein [Mycobacterium tuberculosis T85] Length=305 Score = 576 bits (1485), Expect = 3e-162, Method: Compositional matrix adjust. Identities = 303/305 (99%), Positives = 305/305 (100%), Gaps = 0/305 (0%) Query 105 VLPAAVAANRDAFVQLVMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQ 164 +LPAAVAANRDAFVQLVMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQ Sbjct 1 MLPAAVAANRDAFVQLVMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQ 60 Query 165 VVPWASLLQRFPGLGAGATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYV 224 VVPWASLLQRFPGLGAGATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYV Sbjct 61 VVPWASLLQRFPGLGAGATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYV 120 Query 225 GGGVASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAA 284 GGGVASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAA Sbjct 121 GGGVASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAA 180 Query 285 LGQMARGGTNSAPGTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAA 344 LGQMARGGTNSAPGTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAA Sbjct 181 LGQMARGGTNSAPGTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAA 240 Query 345 PLSTTRVGQSAGSGIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKI 404 PLSTTRVGQSAGSGIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVR+DPKI Sbjct 241 PLSTTRVGQSAGSGIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRQDPKI 300 Query 405 QMRGG 409 QMRGG Sbjct 301 QMRGG 305 >gi|306782186|ref|ZP_07420523.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308325148|gb|EFP13999.1| PPE family protein [Mycobacterium tuberculosis SUMu002] Length=301 Score = 572 bits (1473), Expect = 8e-161, Method: Compositional matrix adjust. Identities = 301/301 (100%), Positives = 301/301 (100%), Gaps = 0/301 (0%) Query 109 AVAANRDAFVQLVMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPW 168 AVAANRDAFVQLVMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPW Sbjct 1 AVAANRDAFVQLVMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPW 60 Query 169 ASLLQRFPGLGAGATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGV 228 ASLLQRFPGLGAGATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGV Sbjct 61 ASLLQRFPGLGAGATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGV 120 Query 229 ASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQM 288 ASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQM Sbjct 121 ASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQM 180 Query 289 ARGGTNSAPGTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLST 348 ARGGTNSAPGTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLST Sbjct 181 ARGGTNSAPGTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLST 240 Query 349 TRVGQSAGSGIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRG 408 TRVGQSAGSGIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRG Sbjct 241 TRVGQSAGSGIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRG 300 Query 409 G 409 G Sbjct 301 G 301 >gi|289746953|ref|ZP_06506331.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289687481|gb|EFD54969.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=292 Score = 551 bits (1419), Expect = 1e-154, Method: Compositional matrix adjust. Identities = 290/292 (99%), Positives = 292/292 (100%), Gaps = 0/292 (0%) Query 118 VQLVMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPG 177 +QLVMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPG Sbjct 1 MQLVMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPG 60 Query 178 LGAGATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGD 237 LGAGATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGD Sbjct 61 LGAGATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGD 120 Query 238 PAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAP 297 PAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAP Sbjct 121 PAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAP 180 Query 298 GTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGS 357 GTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGS Sbjct 181 GTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVGQSAGS 240 Query 358 GIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG 409 GIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVR+DPKIQMRGG Sbjct 241 GIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRQDPKIQMRGG 292 >gi|289755263|ref|ZP_06514641.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289695850|gb|EFD63279.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=410 Score = 514 bits (1324), Expect = 2e-143, Method: Compositional matrix adjust. Identities = 389/410 (95%), Positives = 392/410 (96%), Gaps = 1/410 (0%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +SFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP Sbjct 1 MSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL Sbjct 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA Sbjct 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 Query 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH Sbjct 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 Query 241 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA 300 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA Sbjct 241 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQMARGGTNSAPGTA 300 Query 301 TESARAPEPAASAPPEAVVEVPELEVPAMGVLPTV-DPKVAAKAAPLSTTRVGQSAGSGI 359 TESARAPEPAASAPPEAVVEVPELEVPAMG + TRVGQSAGSGI Sbjct 301 TESARAPEPAASAPPEAVVEVPELEVPAMGGAANCGSESCGPRPLRCRQTRVGQSAGSGI 360 Query 360 PESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMRGG 409 PESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVR+DPKIQMRGG Sbjct 361 PESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRQDPKIQMRGG 410 >gi|289763327|ref|ZP_06522705.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289710833|gb|EFD74849.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=182 Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 181/182 (99%), Positives = 182/182 (100%), Gaps = 0/182 (0%) Query 228 VASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQ 287 +ASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQ Sbjct 1 MASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQ 60 Query 288 MARGGTNSAPGTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLS 347 MARGGTNSAPGTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLS Sbjct 61 MARGGTNSAPGTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLS 120 Query 348 TTRVGQSAGSGIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMR 407 TTRVGQSAGSGIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMR Sbjct 121 TTRVGQSAGSGIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMR 180 Query 408 GG 409 GG Sbjct 181 GG 182 >gi|289751821|ref|ZP_06511199.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289692408|gb|EFD59837.1| PPE family protein [Mycobacterium tuberculosis T92] Length=182 Score = 345 bits (886), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 180/182 (99%), Positives = 182/182 (100%), Gaps = 0/182 (0%) Query 228 VASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQ 287 +ASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQ Sbjct 1 MASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALGQ 60 Query 288 MARGGTNSAPGTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLS 347 MARGGTNSAPGTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLS Sbjct 61 MARGGTNSAPGTATESARAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLS 120 Query 348 TTRVGQSAGSGIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRKDPKIQMR 407 TTRVGQSAGSGIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVR+DPKIQMR Sbjct 121 TTRVGQSAGSGIPESTLRTAQGQQASETSAAEETAPSLRPEAAAGQLRPRVRQDPKIQMR 180 Query 408 GG 409 GG Sbjct 181 GG 182 >gi|408781005|ref|ZP_11192778.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=420 Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 251/425 (60%), Positives = 295/425 (70%), Gaps = 21/425 (4%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +SF VLPPEINSLRMFIGAG+APML AA AW GLA+ELG AAQSFASVT+GLAGQAWQGP Sbjct 1 MSFWVLPPEINSLRMFIGAGSAPMLQAATAWAGLADELGAAAQSFASVTSGLAGQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYA WL+AAAAQSAGAAGQARA+ S+FEAAQAATVLPAAVAANRDAFVQL Sbjct 61 AAAAMAAAAAPYAAWLSAAAAQSAGAAGQARAMVSMFEAAQAATVLPAAVAANRDAFVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLG- 179 VM+NLFGQNAP IA AE +YEEMWAADV+AMSGYYSGA+A+A+Q+VPW S+L+ PG+G Sbjct 121 VMSNLFGQNAPAIAFAESIYEEMWAADVSAMSGYYSGAAALASQLVPWQSILKGLPGMGS 180 Query 180 AGATGATGGE-SVGTGATG--GESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAG 236 AGA G + G + GT G GE GG++ G GG V SAGLA Sbjct 181 AGAAGTSAGSGAAGTTNVGGNGEGANVAGGDNAGGASGGPVGGETTNVVNSSTSAGLAQA 240 Query 237 DPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGFIGAPLALAALG--QMARGGTN 294 DP + +VGQG G G+VG+ +++ TSA GV +PG +G P+ + A G Q G Sbjct 241 DPMYSNVGQGTAGSGNVGSASLLSGGTTSASGGVATPGMMGVPIPIPATGGNQTGSAGIG 300 Query 295 SAPGTATESA--RAPEPAASAPPEAVVEVPELEVPAMGVLPTVDPKVAAKAAPLSTTRVG 352 G+A +A R PE AA E P+L VLP DP++AAKAAP+ RV Sbjct 301 VGAGSAGNAAPTRVPEAAAPPAAEVEAAAPQLR-----VLPNADPEIAAKAAPVPVARVT 355 Query 353 QSAGSGIPESTLRTAQGQQASETSA--------AEETAPSLRPEAAAGQLRPRVRKDPKI 404 QS GSGIPES LR ++ S SA AEE SLRPEA G+LRPR +++P I Sbjct 356 QSTGSGIPESALRPSRTADVSHRSANTQDQASEAEEKVVSLRPEAEKGKLRPRAKQEPGI 415 Query 405 QMRGG 409 QMRGG Sbjct 416 QMRGG 420 >gi|386005990|ref|YP_005924269.1| PPE family protein [Mycobacterium tuberculosis RGTB423] gi|380726478|gb|AFE14273.1| PPE family protein [Mycobacterium tuberculosis RGTB423] Length=271 Score = 313 bits (801), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 247/248 (99%), Positives = 248/248 (100%), Gaps = 0/248 (0%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +SFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP Sbjct 1 MSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL Sbjct 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA Sbjct 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 Query 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH Sbjct 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 Query 241 GSVGQGNF 248 GSVGQGNF Sbjct 241 GSVGQGNF 248 >gi|183981499|ref|YP_001849790.1| PPE family protein [Mycobacterium marinum M] gi|183174825|gb|ACC39935.1| PPE family protein [Mycobacterium marinum M] Length=446 Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 149/176 (85%), Positives = 162/176 (93%), Gaps = 0/176 (0%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +SF VLPPEINSLRMFIGAGTAPML AAAAW GLAEEL TAAQSFASVTAGLAGQAWQG Sbjct 1 MSFFVLPPEINSLRMFIGAGTAPMLEAAAAWQGLAEELSTAAQSFASVTAGLAGQAWQGS 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA+AMA+AAAPYAGWL AAAAQSAGAAG ARAVAS+FEAAQAATVLP +++ANR+AFVQL Sbjct 61 AAMAMASAAAPYAGWLAAAAAQSAGAAGNARAVASMFEAAQAATVLPTSISANRNAFVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFP 176 VM+NLFGQNAP IAAAE +YEEMWAADVAAMSGYYSG SA+AAQVVPW S+L+ P Sbjct 121 VMSNLFGQNAPAIAAAESIYEEMWAADVAAMSGYYSGVSAVAAQVVPWQSVLKGLP 176 >gi|183981484|ref|YP_001849775.1| PPE family protein [Mycobacterium marinum M] gi|183174810|gb|ACC39920.1| PPE family protein [Mycobacterium marinum M] Length=627 Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 155/281 (56%), Positives = 194/281 (70%), Gaps = 28/281 (9%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +SF++LPPEINS+RMF GAG APML AA AW GLAEELGTAA+SF SVT+GLAGQ WQG Sbjct 2 MSFLLLPPEINSVRMFAGAGAAPMLDAAVAWGGLAEELGTAARSFESVTSGLAGQVWQGA 61 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPY GWL+AAAA++ GA+ QARAVA +FEAA++A V P AVAANR+ FVQL Sbjct 62 AAAAMAAAAAPYTGWLSAAAARAVGASAQARAVAEVFEAARSAMVHPVAVAANRNVFVQL 121 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRF----P 176 VM+NLFGQNAP IAA EG YE+MWAADVAAM GY+ GASA AA + W + LQ++ P Sbjct 122 VMSNLFGQNAPAIAATEGAYEQMWAADVAAMVGYHGGASAAAAALPSWEAGLQQWISGLP 181 Query 177 GLG---AGAT---------GATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYV 224 G+G A A+ G G ++G G TG ++G+G ++ G G VG Sbjct 182 GVGQLQAAASAIPAFNLGLGNIGDFNLGNGNTGDNNLGSGNIGNLNLGSGNTGGSNVG-- 239 Query 225 GGGVASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATS 265 +G+ G++G GN+G ++G+G+ V SS S Sbjct 240 ----------SGNYGDGNLGSGNYGNSNLGSGNGVLSSVGS 270 >gi|183985015|ref|YP_001853306.1| PPE family protein [Mycobacterium marinum M] gi|183178341|gb|ACC43451.1| PPE family protein [Mycobacterium marinum M] Length=537 Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 151/258 (59%), Positives = 185/258 (72%), Gaps = 14/258 (5%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 VSF +LPPEINSLRMF GAG+ PML A+AAW+GLAEELG AA SF++VT+GLAGQAWQG Sbjct 2 VSFPMLPPEINSLRMFNGAGSTPMLQASAAWNGLAEELGAAADSFSAVTSGLAGQAWQGA 61 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 A+ AM AAA+PYAGWL+AAAA++AGAAGQA+AVAS FEAA+ A + P AVAANR+ FVQL Sbjct 62 ASAAMTAAASPYAGWLSAAAARAAGAAGQAQAVASAFEAARMAMIHPLAVAANRNVFVQL 121 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 V +N FG NAP I AAE YEEMWAADVAAM+GY+SG SA AA + P+ LLQ P +G Sbjct 122 VRSNFFGFNAPAIMAAESQYEEMWAADVAAMTGYHSGVSAAAASLNPFQQLLQALPNIGL 181 Query 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 G G TG ++G+G TG ++G G TG + GG VG S + G+ Sbjct 182 GNKGGTG--NIGSGNTGSTNIGNG-----NTGSSNFGGGNVG-------SNNIGDGNLGS 227 Query 241 GSVGQGNFGGGDVGAGDV 258 G+ G GN G ++G G+ Sbjct 228 GNWGSGNLGNENIGFGNT 245 >gi|183981425|ref|YP_001849716.1| PPE family protein [Mycobacterium marinum M] gi|183174751|gb|ACC39861.1| PPE family protein [Mycobacterium marinum M] Length=632 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 129/179 (73%), Positives = 148/179 (83%), Gaps = 0/179 (0%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +SF VLPPEINSLR+F GAG+APML AA AWDGL+ ELGTAA+SFASVT+GL GQAWQG Sbjct 1 MSFAVLPPEINSLRIFAGAGSAPMLEAAVAWDGLSAELGTAAESFASVTSGLTGQAWQGA 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAA AAPY+ WL+AAAA++AGAAGQA+ VAS FEAA++A V P AVAANR+ FVQL Sbjct 61 AAKAMAAVAAPYSSWLSAAAARAAGAAGQAKMVASAFEAARSAMVHPLAVAANRNVFVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLG 179 VM+NLFGQNAP IAA EG YEEMWAADVAAM GY+ GASA A+ + W L PG+G Sbjct 121 VMSNLFGQNAPAIAATEGTYEEMWAADVAAMVGYHGGASAAASGLPSWQQALSGLPGIG 179 >gi|289440962|ref|ZP_06430706.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289571774|ref|ZP_06452001.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289413881|gb|EFD11121.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289545528|gb|EFD49176.1| PPE family protein [Mycobacterium tuberculosis T17] Length=582 Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 142/211 (68%), Positives = 165/211 (79%), Gaps = 7/211 (3%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPE+NSLRMF GAG+APMLAAA AWDGLA ELG+AA SF SVT+ LA QAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL+AAAA++AGAA QA+AVAS FEAA+AATV P VAANR+AF QL Sbjct 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VM+N FG NAPLIAA EG YE+MWAADVAAM GY+SGASA A Q+VP+ LQ+ P LG Sbjct 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 Query 181 GAT-------GATGGESVGTGATGGESVGTG 204 G G TG + G G G ++G+G Sbjct 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 >gi|15843145|ref|NP_338182.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31794709|ref|NP_857202.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57117121|ref|YP_177985.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 53 more sequence titles Length=582 Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 142/211 (68%), Positives = 165/211 (79%), Gaps = 7/211 (3%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPE+NSLRMF GAG+APMLAAA AWDGLA ELG+AA SF SVT+ LA QAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL+AAAA++AGAA QA+AVAS FEAA+AATV P VAANR+AF QL Sbjct 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VM+N FG NAPLIAA EG YE+MWAADVAAM GY+SGASA A Q+VP+ LQ+ P LG Sbjct 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 Query 181 GAT-------GATGGESVGTGATGGESVGTG 204 G G TG + G G G ++G+G Sbjct 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 >gi|379029917|dbj|BAL67650.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC 35801] Length=582 Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 142/211 (68%), Positives = 165/211 (79%), Gaps = 7/211 (3%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPE+NSLRMF GAG+APMLAAA AWDGLA ELG+AA SF SVT+ LA QAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL+AAAA++AGAA QA+AVAS FEAA+AATV P VAANR+AF QL Sbjct 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VM+N FG NAPLIAA EG YE+MWAADVAAM GY+SGASA A Q+VP+ LQ+ P LG Sbjct 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 Query 181 GAT-------GATGGESVGTGATGGESVGTG 204 G G TG + G G G ++G+G Sbjct 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 >gi|340628497|ref|YP_004746949.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006687|emb|CCC45875.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=582 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 142/211 (68%), Positives = 164/211 (78%), Gaps = 7/211 (3%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPE+NSLRMF GAG+APMLAAA AWDGLA ELG+AA SF SVT+ LA QAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSSLASQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL+AAAA++AGAA QA+AVAS FEAA+AATV P VAANR AF QL Sbjct 61 AAAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLVVAANRSAFAQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VM+N FG NAPLIAA EG YE+MWAADVAAM GY+SGASA A Q+VP+ LQ+ P LG Sbjct 121 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 180 Query 181 GAT-------GATGGESVGTGATGGESVGTG 204 G G TG + G G G ++G+G Sbjct 181 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 211 >gi|183981160|ref|YP_001849451.1| PPE family protein [Mycobacterium marinum M] gi|183174486|gb|ACC39596.1| PPE family protein [Mycobacterium marinum M] Length=608 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 145/275 (53%), Positives = 181/275 (66%), Gaps = 7/275 (2%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 ++F +LPPEINS RMF GAG+ PML+AA AWDGLA ELG+AA+SF SVT+GL G +WQG Sbjct 1 MNFPMLPPEINSARMFAGAGSGPMLSAAMAWDGLAVELGSAAESFGSVTSGLVGSSWQGA 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AM+AAAAPY WL AAA ++ AA QA+ V S FEAA+AA + P AVAANR+A VQL Sbjct 61 AAAAMSAAAAPYVSWLNAAAVRAGEAALQAKEVVSAFEAARAAMIHPLAVAANRNALVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 V+TNLFGQNAP IAAAEG YE+MWAADVAAM GY+ GASA A+ + W LQ GL Sbjct 121 VLTNLFGQNAPAIAAAEGSYEQMWAADVAAMLGYHGGASAAASGLASWQQALQ---GLAG 177 Query 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 A G S+G G S+G G ++G G A G + GG +A L +G+ Sbjct 178 PAASVIPGLSIGNIGVGNLSIGNIGDFNLGGGNA----GNLNLGGGNTGNANLGSGNNGF 233 Query 241 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGF 275 ++G GN G + G G+ + S + G + GF Sbjct 234 FNLGSGNTGNTNFGNGNRGNLNWGSGNLGNANVGF 268 >gi|118616670|ref|YP_905002.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118568780|gb|ABL03531.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=608 Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 145/275 (53%), Positives = 181/275 (66%), Gaps = 7/275 (2%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 ++F +LPPEINS RMF GAG+ PML+AA AWDGLA ELG+AA+SF SVT+GL G +WQG Sbjct 1 MNFPMLPPEINSARMFAGAGSGPMLSAAMAWDGLAVELGSAAESFGSVTSGLVGSSWQGA 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AM+AAAAPY WL AAA ++ AA QA+ V S FEAA+AA + P AVAANR+A VQL Sbjct 61 AATAMSAAAAPYVSWLNAAAVRAGEAALQAKEVVSAFEAARAAMIHPLAVAANRNALVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 V+TNLFGQNAP IAAAEG YE+MWAADVAAM GY+ GASA A+ + W LQ GL Sbjct 121 VLTNLFGQNAPAIAAAEGSYEQMWAADVAAMLGYHGGASAAASGLASWQQALQ---GLAG 177 Query 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPAH 240 A G S+G G S+G G ++G G A G + GG +A L +G+ Sbjct 178 PAASVILGLSIGNTGVGNLSIGNIGVFNLGGGNA----GNLNLGGGNTGNANLGSGNNGF 233 Query 241 GSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPGF 275 ++G GN G + G G+ + S + G + GF Sbjct 234 FNLGSGNTGNTNFGNGNRGNLNWGSGNLGNANVGF 268 >gi|408780984|ref|ZP_11192757.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=629 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 126/179 (71%), Positives = 150/179 (84%), Gaps = 0/179 (0%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 ++F VLPPEINSLRMF GAG+APML AAAAWDGLAEELGTAAQSF SVT+GL GQAWQG Sbjct 1 MNFFVLPPEINSLRMFTGAGSAPMLQAAAAWDGLAEELGTAAQSFTSVTSGLTGQAWQGA 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AM+AAAAPYAG+L AA+A++ GA+ A+AVAS FEAA++A V P VAANR+AFV+L Sbjct 61 AAAAMSAAAAPYAGFLEAASARAVGASASAKAVASAFEAARSAMVHPLEVAANRNAFVKL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLG 179 V++N+FGQNAPLIAAAEG+YEEMWAADV+AM GY+ GA+ A+ + W L PGLG Sbjct 121 VLSNVFGQNAPLIAAAEGIYEEMWAADVSAMVGYHGGAATAASALQSWQQALSGLPGLG 179 >gi|118616724|ref|YP_905056.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118568834|gb|ABL03585.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=621 Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 115/177 (65%), Positives = 141/177 (80%), Gaps = 0/177 (0%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 ++F++LPPE+NS MF GAG+AP LAAA AWDGL ELG AA++F+SVT+GLA +WQGP Sbjct 1 MNFMMLPPEVNSALMFTGAGSAPTLAAATAWDGLVAELGEAAEAFSSVTSGLASGSWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL+AAA ++ GAA QA+A A++FE+AQAATV P V ANR+ V L Sbjct 61 AAAAMAAAAAPYAGWLSAAATRALGAATQAKAAAAVFESAQAATVHPELVLANRNQLVSL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPG 177 V++NLFGQNAP IAA E YEE+WA DVAA GY+ GASA+AAQ+ PW +Q PG Sbjct 121 VLSNLFGQNAPAIAATESTYEELWAQDVAATVGYHGGASAVAAQLAPWQQAIQALPG 177 >gi|408781103|ref|ZP_11192876.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=550 Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 153/267 (58%), Positives = 189/267 (71%), Gaps = 11/267 (4%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +F VLPPEINSLRMF GAG+APML+AAAAWDGLA EL +AA+SFASVTAGLA QAWQGP Sbjct 2 TNFTVLPPEINSLRMFGGAGSAPMLSAAAAWDGLAGELESAAESFASVTAGLAEQAWQGP 61 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AM AAAAPYAG+L+AA+AQ+A AAGQA+AV + FE A AA + P AVAANR+ FVQL Sbjct 62 AAAAMTAAAAPYAGFLSAASAQAAAAAGQAQAVVAAFETAHAAMIHPVAVAANRNVFVQL 121 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPW-ASLLQRFPGLG 179 VM+NL GQNAP IAA E VYE+MWA DVAAM GY+SGAS+ AA ++P ASL Q GL Sbjct 122 VMSNLLGQNAPAIAATESVYEQMWAQDVAAMFGYHSGASSAAASLIPLPASLQQFLAGLP 181 Query 180 AGATGATGGESVGTGATGGESVGTGGGESVGTGGATASGGGVGYVGGGVASAGLAAGDPA 239 + G G ++G+G TGG+++G+ G S + G G + + AG+ Sbjct 182 SVGLGNKGNANLGSGNTGGQNLGS--GNSGFGNIGGGNRGNDNTGSGNIGNGNFGAGNRY 239 Query 240 HGSVGQGNFG--------GGDVGAGDV 258 +G++G GN G G +VG G+V Sbjct 240 NGNIGFGNIGNPATSPNPGHNVGMGNV 266 >gi|408781745|ref|ZP_11193518.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=657 Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 149/306 (49%), Positives = 193/306 (64%), Gaps = 36/306 (11%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 ++F V+PPEINSLR+F GAG+APML AA AWD LA ELG+AA+SF SVTAGLAGQAWQG Sbjct 1 MNFSVMPPEINSLRIFAGAGSAPMLEAAVAWDSLAAELGSAAESFGSVTAGLAGQAWQGA 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 A+ AM AAAAPY+GWL+ AAA++A A+ QA+AVAS FE A+ A V P AVAANR+AFV+L Sbjct 61 ASRAMVAAAAPYSGWLSTAAARAAAASAQAKAVASAFETARVAMVHPLAVAANRNAFVRL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQR------ 174 V++N+FGQNAP IA AE YE+MWAADVAAM GY+ GASA AA + W LQ+ Sbjct 121 VLSNVFGQNAPAIALAEAQYEQMWAADVAAMVGYHGGASAAAAHLQSWQRGLQQALSGVL 180 Query 175 -FPGLGAGA-----------------------TGATGGESVGTGATGGESVGTG--GGES 208 P A A G G +G G TG ++G+G G + Sbjct 181 GLPASAAAAAAQNPAAGSAAAGAAAGAAAATPVGNNGNLQLGGGNTGDSNLGSGNIGNAN 240 Query 209 VGTGGATASGGGVGYVGGGVASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHA 268 +G+G G GG + +A L +G+ + +VG GNFG + G G++ +A + + Sbjct 241 LGSGNT----GNANLGGGNIGNANLGSGNKGNINVGNGNFGSANFGDGNIGIRNAGAGNN 296 Query 269 GVVSPG 274 G + G Sbjct 297 GTANMG 302 >gi|306778415|ref|ZP_07416752.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308328515|gb|EFP17366.1| PPE family protein [Mycobacterium tuberculosis SUMu002] Length=581 Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 142/211 (68%), Positives = 165/211 (79%), Gaps = 8/211 (3%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPE+NSLRMF GAG+APMLAAA AWDGLA ELG+AA SF SVT+ LA QAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL+AAAA++AGAA QA+AVAS FEAA+AATV P VAANR+AF QL Sbjct 61 AA-AMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 119 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VM+N FG NAPLIAA EG YE+MWAADVAAM GY+SGASA A Q+VP+ LQ+ P LG Sbjct 120 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 179 Query 181 GAT-------GATGGESVGTGATGGESVGTG 204 G G TG + G G G ++G+G Sbjct 180 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 210 >gi|289763711|ref|ZP_06523089.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289711217|gb|EFD75233.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=581 Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 140/211 (67%), Positives = 163/211 (78%), Gaps = 8/211 (3%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPE+NSLRMF GAG+APMLAAA AWDGLA ELG+AA SF SVT+ LA QAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA A AAAAPYAGWL+AAAA++AGAA QA+AVAS FEAA+AATV P VAANR+AF QL Sbjct 61 AA-AAMAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 119 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VM+N FG NAPLIAA EG YE+MWAADVAAM GY+SGASA A Q+VP+ LQ+ P LG Sbjct 120 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 179 Query 181 GAT-------GATGGESVGTGATGGESVGTG 204 G G TG + G G G ++G+G Sbjct 180 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 210 >gi|408781100|ref|ZP_11192873.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=370 Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 154/283 (55%), Positives = 184/283 (66%), Gaps = 15/283 (5%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 ++F++LPPEINSLRM+ GAG+ PML AAA W GLAEEL AA SF+SVT+ LA QAWQGP Sbjct 1 MNFMMLPPEINSLRMYCGAGSGPMLEAAAGWSGLAEELEAAAGSFSSVTSALACQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL AA+AQ+A AAGQA+AV S FEAAQAA + P VAANR+ FV+L Sbjct 61 AAAAMAAAAAPYAGWLNAASAQAANAAGQAQAVVSAFEAAQAAMIHPLLVAANRNTFVRL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VM+NLFG NAP IAAAE YEEMWA DVAAM GY+ G SA AAQ+ A LQ PGL A Sbjct 121 VMSNLFGFNAPAIAAAEFQYEEMWAQDVAAMVGYHGGVSAAAAQLASPAQALQNLPGLAA 180 Query 181 GATGATGGESVGTGATGGESVGTGGGESVGTGGATASG-GGVGYVGGGVASAGLAAGDPA 239 A + +G G G ++VG VG G +G VG G + G+ P Sbjct 181 NAAANAAAD-LGFGNLGWDNVGF-FNSGVGNFGIFNNGQHNVGAYNKGDNNVGVGNNTPD 238 Query 240 HGSV---GQ---------GNFGGGDVGAGDVVASSATSAHAGV 270 G GQ GNFG G+ G G+V A + ++G+ Sbjct 239 KGYCAPNGQRYDAKTTFDGNFGAGNFGHGNVGAFNNGVGNSGI 281 >gi|306791127|ref|ZP_07429429.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308340243|gb|EFP29094.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] Length=553 Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 142/211 (68%), Positives = 165/211 (79%), Gaps = 8/211 (3%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPE+NSLRMF GAG+APMLAAA AWDGLA ELG+AA SF SVT+ LA QAWQGP Sbjct 1 MNYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL+AAAA++AGAA QA+AVAS FEAA+AATV P VAANR+AF QL Sbjct 61 AA-AMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQL 119 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 VM+N FG NAPLIAA EG YE+MWAADVAAM GY+SGASA A Q+VP+ LQ+ P LG Sbjct 120 VMSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGI 179 Query 181 GAT-------GATGGESVGTGATGGESVGTG 204 G G TG + G G G ++G+G Sbjct 180 GNIGNANLGGGNTGDLNTGNGNIGNTNLGSG 210 >gi|408784131|ref|ZP_11195904.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=571 Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 104/165 (64%), Positives = 127/165 (77%), Gaps = 0/165 (0%) Query 15 MFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGPAALAMAAAAAPYAG 74 M++GAG+AP+L +AAW GLA+ELGTAA SF+SVT+ LAGQAWQGPA+ AMA AA PYA Sbjct 1 MYLGAGSAPLLEVSAAWSGLADELGTAADSFSSVTSNLAGQAWQGPASQAMARAARPYAE 60 Query 75 WLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQLVMTNLFGQNAPLIA 134 +L AA+ ++ + AR VASIFEAA+AATV P +AANR AFVQ V TN+FG NAP IA Sbjct 61 FLRAASLRATTTSSGARTVASIFEAAKAATVHPEIIAANRQAFVQAVRTNIFGFNAPFIA 120 Query 135 AAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLG 179 AAE YEE WA DVAA+ GY+ GASA+AAQ+ W +Q PG+G Sbjct 121 AAEAAYEEFWATDVAALVGYHGGASAVAAQLSSWQQTMQHLPGIG 165 >gi|408784271|ref|ZP_11196044.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=591 Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 144/265 (55%), Positives = 181/265 (69%), Gaps = 11/265 (4%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 ++FV+LPPEINS R+++GAG+ PMLAAAAAWDGLA ELG+AA SF SVT+GL G WQGP Sbjct 4 MNFVILPPEINSARVYLGAGSGPMLAAAAAWDGLAGELGSAAGSFGSVTSGLTGAVWQGP 63 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AM AAAPY GWL+AAAA + GAAGQAR S FEAA AATV P AVAANR+ V L Sbjct 64 AATAMVEAAAPYVGWLSAAAAHAQGAAGQARTAVSAFEAAVAATVHPVAVAANRNQLVSL 123 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQR----FP 176 V++NLFGQNAP IAAAE YE+MWA DVAAM GY+ A+A+ AQ+ P S LQ+ P Sbjct 124 VVSNLFGQNAPAIAAAETAYEQMWAQDVAAMVGYHGEAAAVVAQLAPMQSGLQQALQTLP 183 Query 177 GLGAG-ATGATGGESVGTGATGGESVGTG--GGESVGTGGATASGGGVGYVGGGVASAGL 233 G+ A G G ++G G G ++G+G G +VG+G A + G G G ++ + Sbjct 184 GMLANLGVGNAGSGNLGGGNHGDNNLGSGNNGSHNVGSGNAGNTNLGNGNSG----NSNV 239 Query 234 AAGDPAHGSVGQGNFGGGDVGAGDV 258 G+ + G GN GG + G G++ Sbjct 240 GNGNRGDQNFGSGNSGGTNTGNGNI 264 >gi|183984524|ref|YP_001852815.1| PPE family protein [Mycobacterium marinum M] gi|183177850|gb|ACC42960.1| PPE family protein [Mycobacterium marinum M] Length=668 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 143/215 (67%), Positives = 165/215 (77%), Gaps = 11/215 (5%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 ++F + PPEINSLRMF GAG+APML AAAAW+GLA ELG+AA SFASVT+GL GQAWQGP Sbjct 1 MNFSIFPPEINSLRMFTGAGSAPMLQAAAAWEGLAGELGSAADSFASVTSGLVGQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 A+ AMAAA APY WL+AAAAQ+ GAAG A+ VAS FEAA+AATVLPAAVAANR+A VQ+ Sbjct 61 ASAAMAAAVAPYTSWLSAAAAQAVGAAGAAKMVASAFEAARAATVLPAAVAANRNALVQM 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFP---- 176 VM+N+FGQNAP IAAAE YEEMWA DVAAM GY+SGASA+AA + PW LLQ P Sbjct 121 VMSNIFGQNAPAIAAAEAAYEEMWAQDVAAMFGYHSGASAVAAALSPWEQLLQNVPALSP 180 Query 177 -----GLGAG--ATGATGGESVGTGATGGESVGTG 204 LGAG G TG ++G G TG + G G Sbjct 181 LAAIGNLGAGNLGFGNTGIANLGNGNTGNLNFGGG 215 >gi|408780986|ref|ZP_11192759.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=1081 Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 124/173 (72%), Positives = 141/173 (82%), Gaps = 0/173 (0%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 ++F VLPPEINSLRMF GAG+APML AA AWDGL+ ELG+AA SF+SVT GLAGQAWQGP Sbjct 1 MNFSVLPPEINSLRMFSGAGSAPMLQAATAWDGLSAELGSAASSFSSVTFGLAGQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL AAA++AGAA QA AVAS+F+AA+ A V P VAANR+ FVQL Sbjct 61 AAQAMAAAAAPYAGWLNVAAARAAGAADQANAVASVFDAARTAMVRPVVVAANRNEFVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQ 173 VM+NLFGQNAP IAAAE YE MWA+ VA M+GY+SG S IA Q+ W LQ Sbjct 121 VMSNLFGQNAPAIAAAEAEYEGMWASAVATMAGYHSGVSVIAGQLASWRGALQ 173 >gi|408780124|ref|ZP_11191897.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=539 Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 151/270 (56%), Positives = 186/270 (69%), Gaps = 13/270 (4%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +SF+VLPPE+NS MF GAG+ P+L AAAAW+GLA +LGTAA SF+SVT+GLAGQAWQGP Sbjct 1 MSFLVLPPELNSALMFSGAGSGPLLDAAAAWEGLASDLGTAASSFSSVTSGLAGQAWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 A+ AMAAAAAPY+GWL AAA Q+AGAAGQARAV S FEAAQAATV P VA NR++ VQ+ Sbjct 61 ASQAMAAAAAPYSGWLNAAAVQAAGAAGQARAVVSAFEAAQAATVQPVMVALNRNSLVQM 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWAS---LLQRFPG 177 V++N FG NAP IA E YE MWA DV+AMSGYYSGASA AA+++P S LL P Sbjct 121 VLSNWFGLNAPAIAQLEADYEAMWAQDVSAMSGYYSGASAAAARLLPAQSLQDLLAALPN 180 Query 178 LGAG-------ATGATGGESVGTGATGGESVGTG--GGESVGTGGATASGGGVGYVGGGV 228 LG G G G + G G TG +++G+G G ++G+G + + G G +G Sbjct 181 LGIGNIGSANLGNGNNGSVNAGNGNTGNQNLGSGNKGSFNIGSGNSGNANFGSGNIGNDN 240 Query 229 ASAGLAAGDPAHGSVGQGNFGGGDVGAGDV 258 G GDP+ S NFG G+ G G+ Sbjct 241 IGFG-NTGDPSTSSNPGANFGIGNTGNGNF 269 >gi|183984289|ref|YP_001852580.1| PPE family protein [Mycobacterium marinum M] gi|183177615|gb|ACC42725.1| PPE family protein [Mycobacterium marinum M] Length=621 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 117/177 (67%), Positives = 143/177 (81%), Gaps = 0/177 (0%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 ++F++LPPE+NS MF GAG+AP LAAA AWDGLA ELG AA++F+SVT+GLA +WQGP Sbjct 1 MNFMMLPPEVNSALMFTGAGSAPTLAAATAWDGLAAELGEAAEAFSSVTSGLASGSWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL+AAA ++ GAA QA+A A++FE+AQAATV P V ANR+ V L Sbjct 61 AAAAMAAAAAPYAGWLSAAATRALGAATQAKAAAAVFESAQAATVHPELVLANRNQLVSL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPG 177 V++NLFGQNAP IAA E YEE+WA DVAAM GY+ GASA+AAQ+ PW +Q PG Sbjct 121 VLSNLFGQNAPAIAATESTYEELWAQDVAAMVGYHGGASAVAAQLAPWQQAIQALPG 177 >gi|408784772|ref|ZP_11196545.1| PPE family protein, partial [Mycobacterium kansasii ATCC 12478] Length=200 Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 138/201 (69%), Positives = 158/201 (79%), Gaps = 8/201 (3%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAG---QAW 57 ++F VLPPEINS RMF GAG+ PMLAAAAAW GLA+ELG+AA +F SVT+GLAG AW Sbjct 1 MNFSVLPPEINSFRMFSGAGSGPMLAAAAAWAGLADELGSAAAAFGSVTSGLAGGPGSAW 60 Query 58 QGPAALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAF 117 QGPAA AMAA AAPY+GWL+AAAA++AGAA QA+AV FEAA+AA V P AVAANR+ F Sbjct 61 QGPAAAAMAAVAAPYSGWLSAAAARAAGAAAQAQAVVGAFEAARAAVVHPLAVAANRNVF 120 Query 118 VQLVMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPG 177 VQLVM+NLFGQNAP IAAAEGVYEEMWAADVAAM GY+ G SA AAQ+ W+ + PG Sbjct 121 VQLVMSNLFGQNAPAIAAAEGVYEEMWAADVAAMVGYHGGVSAAAAQLASWSGSVAGLPG 180 Query 178 LGAGATGATGGESVGTGATGG 198 L +G GG S GTGA G Sbjct 181 L----SGLVGGVS-GTGAAAG 196 >gi|183984190|ref|YP_001852481.1| PPE family protein [Mycobacterium marinum M] gi|183177516|gb|ACC42626.1| PPE family protein [Mycobacterium marinum M] Length=728 Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 144/281 (52%), Positives = 179/281 (64%), Gaps = 27/281 (9%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 ++F +LPPEINS R+F GAG+ PML AAAAWDGLA EL +AA SF SVT+GL G +WQGP Sbjct 1 MNFSILPPEINSARIFAGAGSGPMLQAAAAWDGLAAELSSAADSFGSVTSGLVGGSWQGP 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AM AAAAPY+ WL+ AAA++ AAGQA+ VAS FEAA AA + P AV NR FV L Sbjct 61 AAAAMTAAAAPYSAWLSVAAARAQSAAGQAKTVASTFEAAWAAMIHPVAVGQNRSQFVSL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFPGLGA 180 V +NLFG NAP IAA E YE+MWA DVAAMSGY++G SA AA + PW ++LQ PGL + Sbjct 121 VRSNLFGFNAPAIAAVEAQYEQMWAQDVAAMSGYHAGVSASAAALAPWQTVLQNLPGL-S 179 Query 181 GAT---GATGGESVGTGATGGESVGTG-------------------GGESVGTGGATASG 218 G G G +VG+G G + G G G +VG G A+ Sbjct 180 GVNLGIGNIGNFNVGSGNFGSYNFGGGNSGPSSTSGGIGNIGFGNYGNSNVGAGNGNAAL 239 Query 219 G--GVGYVGGGVASAGLAAGDPAHGSVGQGNFGGGDVGAGD 257 G G Y G +S + AG+ ++G GNFG G++G G+ Sbjct 240 GVPGSSYP--GASSYNVGAGNIGQFNIGLGNFGSGNIGFGN 278 >gi|340628135|ref|YP_004746587.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006325|emb|CCC45504.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=590 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 162/298 (55%), Positives = 208/298 (70%), Gaps = 24/298 (8%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPEINSLRMF GAG+APMLAA+ AWDGLA EL AA SF SVT+GLAGQ+WQG Sbjct 1 MNYSVLPPEINSLRMFTGAGSAPMLAASVAWDGLAAELAVAASSFGSVTSGLAGQSWQGA 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL AAAA++AGA+ QA+AVAS FEAA+AATV P VAANR+AFVQL Sbjct 61 AAAAMAAAAAPYAGWLAAAAARAAGASAQAKAVASAFEAARAATVHPMLVAANRNAFVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFP---- 176 V++NLFGQNAP IAAAE +YE+MWAADVAAM GY+ GASA AAQ+ W+ LQ+ Sbjct 121 VLSNLFGQNAPAIAAAEAMYEQMWAADVAAMVGYHGGASAAAAQLSSWSIGLQQALPAAP 180 Query 177 ------------GLGAGATGATGGESVGTGATGGESVGTG--GGESVGTGGATASGGGVG 222 G+G G TG ++G+G +G +VG+G G +VG+G A+ G G Sbjct 181 SALAAAIGLGNIGVGNLGGGNTGDYNLGSGNSGNANVGSGNSGNANVGSGNDGATNLGSG 240 Query 223 YVG------GGVASAGLAAGDPAHGSVGQGNFGGGDVGAGDVVASSATSAHAGVVSPG 274 +G G V + L +G+ G++G GNFG G++G+G+ +++ + G + G Sbjct 241 NIGNTNLGSGNVGNVNLGSGNRGFGNLGNGNFGSGNLGSGNTGSTNFGDGNLGSFNLG 298 >gi|379029502|dbj|BAL67235.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC 35801] Length=590 Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 160/282 (57%), Positives = 201/282 (72%), Gaps = 24/282 (8%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPEINSLRMF GAG+APMLAA+ AWDGLA EL AA SF SVT+GLAGQ+WQG Sbjct 1 MNYSVLPPEINSLRMFTGAGSAPMLAASVAWDGLAAELAVAASSFGSVTSGLAGQSWQGA 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL AAAA++AGA+ QA+AVAS FEAA+AATV P VAANR+AFVQL Sbjct 61 AAAAMAAAAAPYAGWLAAAAARAAGASAQAKAVASAFEAARAATVHPMLVAANRNAFVQL 120 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFP---- 176 V++NLFGQNAP IAAAE +YE+MWAADVAAM GY+ GASA AAQ+ W+ LQ+ Sbjct 121 VLSNLFGQNAPAIAAAEAMYEQMWAADVAAMVGYHGGASAAAAQLSSWSIGLQQALPAAP 180 Query 177 ------------GLGAGATGATGGESVGTGATGGESVGTG--GGESVGTGGATASGGGVG 222 G+G G TG ++G+G +G +VG+G G +VG+G A+ G G Sbjct 181 SALAAAIGLGNIGVGNLGGGNTGDYNLGSGNSGNANVGSGNSGNANVGSGNDGATNLGSG 240 Query 223 YVG------GGVASAGLAAGDPAHGSVGQGNFGGGDVGAGDV 258 +G G V + L +G+ G++G GNFG G++G+G+ Sbjct 241 NIGNTNLGSGNVGNVNLGSGNRGFGNLGNGNFGSGNLGSGNT 282 >gi|15842735|ref|NP_337772.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|254365784|ref|ZP_04981829.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|13883057|gb|AAK47586.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|134151297|gb|EBA43342.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=603 Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 160/282 (57%), Positives = 201/282 (72%), Gaps = 24/282 (8%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPEINSLRMF GAG+APMLAA+ AWDGLA EL AA SF SVT+GLAGQ+WQG Sbjct 14 MNYSVLPPEINSLRMFTGAGSAPMLAASVAWDGLAAELAVAASSFGSVTSGLAGQSWQGA 73 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL AAAA++AGA+ QA+AVAS FEAA+AATV P VAANR+AFVQL Sbjct 74 AAAAMAAAAAPYAGWLAAAAARAAGASAQAKAVASAFEAARAATVHPMLVAANRNAFVQL 133 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFP---- 176 V++NLFGQNAP IAAAE +YE+MWAADVAAM GY+ GASA AAQ+ W+ LQ+ Sbjct 134 VLSNLFGQNAPAIAAAEAMYEQMWAADVAAMVGYHGGASAAAAQLSSWSIGLQQALPAAP 193 Query 177 ------------GLGAGATGATGGESVGTGATGGESVGTG--GGESVGTGGATASGGGVG 222 G+G G TG ++G+G +G +VG+G G +VG+G A+ G G Sbjct 194 SALAAAIGLGNIGVGNLGGGNTGDYNLGSGNSGNANVGSGNSGNANVGSGNDGATNLGSG 253 Query 223 YVG------GGVASAGLAAGDPAHGSVGQGNFGGGDVGAGDV 258 +G G V + L +G+ G++G GNFG G++G+G+ Sbjct 254 NIGNTNLGSGNVGNVNLGSGNRGFGNLGNGNFGSGNLGSGNT 295 >gi|289755278|ref|ZP_06514656.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289695865|gb|EFD63294.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=593 Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 160/282 (57%), Positives = 201/282 (72%), Gaps = 24/282 (8%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPEINSLRMF GAG+APMLAA+ AWDGLA EL AA SF SVT+GLAGQ+WQG Sbjct 14 MNYSVLPPEINSLRMFTGAGSAPMLAASVAWDGLAAELAVAASSFGSVTSGLAGQSWQGA 73 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL AAAA++AGA+ QA+AVAS FEAA+AATV P VAANR+AFVQL Sbjct 74 AAAAMAAAAAPYAGWLAAAAARAAGASAQAKAVASAFEAARAATVHPMLVAANRNAFVQL 133 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFP---- 176 V++NLFGQNAP IAAAE +YE+MWAADVAAM GY+ GASA AAQ+ W+ LQ+ Sbjct 134 VLSNLFGQNAPAIAAAEAMYEQMWAADVAAMVGYHGGASAAAAQLSSWSIGLQQALPAAP 193 Query 177 ------------GLGAGATGATGGESVGTGATGGESVGTG--GGESVGTGGATASGGGVG 222 G+G G TG ++G+G +G +VG+G G +VG+G A+ G G Sbjct 194 SALAAAIGLGNIGVGNLGGGNTGDYNLGSGNSGNANVGSGNSGNANVGSGNDGATNLGSG 253 Query 223 YVG------GGVASAGLAAGDPAHGSVGQGNFGGGDVGAGDV 258 +G G V + L +G+ G++G GNFG G++G+G+ Sbjct 254 NIGNTNLGSGNVGNVNLGSGNRGFGNLGNGNFGSGNLGSGNT 295 >gi|298526633|ref|ZP_07014042.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298496427|gb|EFI31721.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] Length=603 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 160/282 (57%), Positives = 201/282 (72%), Gaps = 24/282 (8%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPEINSLRMF GAG+APMLAA+ AWDGLA EL AA SF SVT+GLAGQ+WQG Sbjct 14 MNYSVLPPEINSLRMFTGAGSAPMLAASVAWDGLAAELAVAASSFGSVTSGLAGQSWQGA 73 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL AAAA++AGA+ QA+AVAS FEAA+AATV P VAANR+AFVQL Sbjct 74 AAAAMAAAAAPYAGWLAAAAARAAGASAQAKAVASAFEAARAATVHPMLVAANRNAFVQL 133 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFP---- 176 V++NLFGQNAP IAAAE +YE+MWAADVAAM GY+ GASA AAQ+ W+ LQ+ Sbjct 134 VLSNLFGQNAPAIAAAEAMYEQMWAADVAAMVGYHGGASAAAAQLSSWSIGLQQALPAAP 193 Query 177 ------------GLGAGATGATGGESVGTGATGGESVGTG--GGESVGTGGATASGGGVG 222 G+G G TG ++G+G +G +VG+G G +VG+G A+ G G Sbjct 194 SALAAAIGLGNIGVGNLGGGNTGDYNLGSGNSGNANVGSGNSGNANVGSGNDGATNLGSG 253 Query 223 YVG------GGVASAGLAAGDPAHGSVGQGNFGGGDVGAGDV 258 +G G V + L +G+ G++G GNFG G++G+G+ Sbjct 254 NIGNTNLGSGNVGNVNLGSGNRGFGNLGNGNFGSGNLGSGNT 295 >gi|289763736|ref|ZP_06523114.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289711242|gb|EFD75258.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=551 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 134/206 (66%), Positives = 160/206 (78%), Gaps = 9/206 (4%) Query 3 FVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGPAA 62 F VLPPEINSLRM++GAG+APML AAA WDGLA ELGTAA SF+SVT GL GQAWQGPA+ Sbjct 4 FSVLPPEINSLRMYLGAGSAPMLQAAA-WDGLAAELGTAASSFSSVTTGLTGQAWQGPAS 62 Query 63 LAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQLVM 122 AMAAAAAPYAG+LT A+AQ+ AAGQA+AVAS+FEAA+AA V PAAVAANR+AF+ L+ Sbjct 63 AAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALIR 122 Query 123 TNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRF----PGL 178 +N G NAP IAA E +YEE WAADVAAM+GY++GAS AAQ +P + LQ+F P L Sbjct 123 SNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQ-LPLPAGLQQFLNTLPNL 181 Query 179 GAGATGATGGESVGTGATGGESVGTG 204 G G G ++G G TG ++G G Sbjct 182 GIGNQGN---ANLGGGNTGSGNIGNG 204 >gi|297636230|ref|ZP_06954010.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] gi|297733224|ref|ZP_06962342.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|313660554|ref|ZP_07817434.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] Length=551 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 134/206 (66%), Positives = 160/206 (78%), Gaps = 9/206 (4%) Query 3 FVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGPAA 62 F VLPPEINSLRM++GAG+APML AAA WDGLA ELGTAA SF+SVT GL GQAWQGPA+ Sbjct 4 FSVLPPEINSLRMYLGAGSAPMLQAAA-WDGLAAELGTAASSFSSVTTGLTGQAWQGPAS 62 Query 63 LAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQLVM 122 AMAAAAAPYAG+LT A+AQ+ AAGQA+AVAS+FEAA+AA V PAAVAANR+AF+ L+ Sbjct 63 AAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALIR 122 Query 123 TNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRF----PGL 178 +N G NAP IAA E +YEE WAADVAAM+GY++GAS AAQ +P + LQ+F P L Sbjct 123 SNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQ-LPLPAGLQQFLNTLPNL 181 Query 179 GAGATGATGGESVGTGATGGESVGTG 204 G G G ++G G TG ++G G Sbjct 182 GIGNQGN---ANLGGGNTGSGNIGNG 204 >gi|148824764|ref|YP_001289518.1| PPE family protein [Mycobacterium tuberculosis F11] gi|254552665|ref|ZP_05143112.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|386000343|ref|YP_005918642.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] gi|148723291|gb|ABR07916.1| PPE family protein [Mycobacterium tuberculosis F11] gi|344221390|gb|AEN02021.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=551 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 134/206 (66%), Positives = 160/206 (78%), Gaps = 9/206 (4%) Query 3 FVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGPAA 62 F VLPPEINSLRM++GAG+APML AAA WDGLA ELGTAA SF+SVT GL GQAWQGPA+ Sbjct 4 FSVLPPEINSLRMYLGAGSAPMLQAAA-WDGLAAELGTAASSFSSVTTGLTGQAWQGPAS 62 Query 63 LAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQLVM 122 AMAAAAAPYAG+LT A+AQ+ AAGQA+AVAS+FEAA+AA V PAAVAANR+AF+ L+ Sbjct 63 AAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALIR 122 Query 123 TNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRF----PGL 178 +N G NAP IAA E +YEE WAADVAAM+GY++GAS AAQ +P + LQ+F P L Sbjct 123 SNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQ-LPLPAGLQQFLNTLPNL 181 Query 179 GAGATGATGGESVGTGATGGESVGTG 204 G G G ++G G TG ++G G Sbjct 182 GIGNQGN---ANLGGGNTGSGNIGNG 204 >gi|253800599|ref|YP_003033600.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|375297825|ref|YP_005102092.1| hypothetical protein TBSG_03624 [Mycobacterium tuberculosis KZN 4207] gi|392434037|ref|YP_006475081.1| hypothetical protein TBXG_003573 [Mycobacterium tuberculosis KZN 605] gi|253322102|gb|ACT26705.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|328460330|gb|AEB05753.1| hypothetical protein TBSG_03624 [Mycobacterium tuberculosis KZN 4207] gi|392055446|gb|AFM51004.1| hypothetical protein TBXG_003573 [Mycobacterium tuberculosis KZN 605] Length=631 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 150/282 (54%), Positives = 184/282 (66%), Gaps = 34/282 (12%) Query 3 FVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGPAA 62 F VLPPEINSLRM++GAG+APML AAA WDGLA ELGTAA SF+SVT GL GQAWQGPA+ Sbjct 84 FSVLPPEINSLRMYLGAGSAPMLQAAA-WDGLAAELGTAASSFSSVTTGLTGQAWQGPAS 142 Query 63 LAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQLVM 122 AMAAAAAPYAG+LT A+AQ+ AAGQA+AVAS+FEAA+AA V PAAVAANR+AF+ L+ Sbjct 143 AAMAAAAAPYAGFLTTASAQAQLAAGQAKAVASVFEAAKAAIVPPAAVAANREAFLALIR 202 Query 123 TNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRF----PGL 178 +N G NAP IAA E +YEE WAADVAAM+GY++GAS AAQ +P + LQ+F P L Sbjct 203 SNWLGLNAPWIAAVESLYEEYWAADVAAMTGYHAGASQAAAQ-LPLPAGLQQFLNTLPNL 261 Query 179 GAGATGATGGESVGTGATGGESVGTG----------------------GGESVGTGGATA 216 G G G ++G G TG ++G G G ++ G G Sbjct 262 G---IGNQGNANLGGGNTGSGNIGNGNKGSSNFGGGNIGNNNIGSGNRGSDNFGAGNVGT 318 Query 217 SGGGVGYVGGGVASAGLAAGDPAHGSVGQGNFGGGDVGAGDV 258 G +G+ G L A P +VG GN G ++G G+ Sbjct 319 --GNIGFGNQGPIDVNLLA-TPGQNNVGLGNIGNNNMGFGNT 357 >gi|121639042|ref|YP_979266.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991534|ref|YP_002646223.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|378772900|ref|YP_005172633.1| PPE family protein [Mycobacterium bovis BCG str. Mexico] gi|121494690|emb|CAL73171.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774649|dbj|BAH27455.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341603081|emb|CCC65759.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] gi|356595221|gb|AET20450.1| PPE family protein [Mycobacterium bovis BCG str. Mexico] Length=589 Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 159/282 (57%), Positives = 200/282 (71%), Gaps = 25/282 (8%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPEINSLRMF GAG+APMLAA+ AWD LA EL AA SF SVT+GLAGQ+WQG Sbjct 1 MNYSVLPPEINSLRMFTGAGSAPMLAASVAWDRLAAELAVAASSFGSVTSGLAGQSWQGA 60 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL AAAA++AGA+ QA+AVAS FEAA+AATV P VAANR+AFVQL Sbjct 61 AA-AMAAAAAPYAGWLAAAAARAAGASVQAKAVASAFEAARAATVHPMLVAANRNAFVQL 119 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFP---- 176 V++NLFGQNAP IAAAE +YE+MWAADVAAM GY+ GASA AAQ+ W+ LQ+ Sbjct 120 VLSNLFGQNAPAIAAAEAMYEQMWAADVAAMVGYHGGASAAAAQLSSWSIGLQQALPAAP 179 Query 177 ------------GLGAGATGATGGESVGTGATGGESVGTG--GGESVGTGGATASGGGVG 222 G+G G TG ++G+G +G +VG+G G +VG+G A+ G G Sbjct 180 SALAAAIGLGNIGVGNLGGGNTGEYNLGSGNSGNANVGSGNSGNANVGSGNDGATNLGSG 239 Query 223 YVG------GGVASAGLAAGDPAHGSVGQGNFGGGDVGAGDV 258 +G G V + L +G+ G++G GNFG G++G+G+ Sbjct 240 NIGNTNLGSGNVGNVNLGSGNRGFGNLGNGNFGSGNLGSGNT 281 >gi|289746971|ref|ZP_06506349.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289687499|gb|EFD54987.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=327 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 160/281 (57%), Positives = 201/281 (72%), Gaps = 25/281 (8%) Query 1 VSFVVLPPEINSLRMFIGAGTAPMLAAAAAWDGLAEELGTAAQSFASVTAGLAGQAWQGP 60 +++ VLPPEINSLRMF GAG+APMLAA+ AWDGLA EL AA SF SVT+GLAGQ+WQG Sbjct 14 MNYSVLPPEINSLRMFTGAGSAPMLAASVAWDGLAAELAVAASSFGSVTSGLAGQSWQGA 73 Query 61 AALAMAAAAAPYAGWLTAAAAQSAGAAGQARAVASIFEAAQAATVLPAAVAANRDAFVQL 120 AA AMAAAAAPYAGWL AAAA++AGA+ QA+AVAS FEAA+AATV P VAANR+AFVQL Sbjct 74 AA-AMAAAAAPYAGWLAAAAARAAGASAQAKAVASAFEAARAATVHPMLVAANRNAFVQL 132 Query 121 VMTNLFGQNAPLIAAAEGVYEEMWAADVAAMSGYYSGASAIAAQVVPWASLLQRFP---- 176 V++NLFGQNAP IAAAE +YE+MWAADVAAM GY+ GASA AAQ+ W+ LQ+ Sbjct 133 VLSNLFGQNAPAIAAAEAMYEQMWAADVAAMVGYHGGASAAAAQLSSWSIGLQQALPAAP 192 Query 177 ------------GLGAGATGATGGESVGTGATGGESVGTG--GGESVGTGGATASGGGVG 222 G+G G TG ++G+G +G +VG+G G +VG+G A+ G G Sbjct 193 SALAAAIGLGNIGVGNLGGGNTGDYNLGSGNSGNANVGSGNSGNANVGSGNDGATNLGSG 252 Query 223 YVG------GGVASAGLAAGDPAHGSVGQGNFGGGDVGAGD 257 +G G V + L +G+ G++G GNFG G++G+G+ Sbjct 253 NIGNTNLGSGNVGNVNLGSGNRGFGNLGNGNFGSGNLGSGN 293 Lambda K H 0.310 0.126 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1109152967970 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Oct 14, 2012 4:13 PM Number of letters in database: 7,218,481,314 Number of sequences in database: 21,062,489 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40