BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3146
Length=184
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610282|ref|NP_217662.1| NADH dehydrogenase subunit B [Mycob... 375 1e-102
gi|289751824|ref|ZP_06511202.1| LOW QUALITY PROTEIN: NADH dehydr... 374 2e-102
gi|298526620|ref|ZP_07014029.1| NADH dehydrogenase I, B subunit ... 373 6e-102
gi|41409300|ref|NP_962136.1| NADH dehydrogenase subunit B [Mycob... 367 4e-100
gi|342861054|ref|ZP_08717703.1| NADH dehydrogenase subunit B [My... 365 2e-99
gi|254821135|ref|ZP_05226136.1| NADH dehydrogenase subunit B [My... 365 2e-99
gi|145225061|ref|YP_001135739.1| NADH dehydrogenase subunit B [M... 353 9e-96
gi|120402882|ref|YP_952711.1| NADH dehydrogenase subunit B [Myco... 352 1e-95
gi|118467443|ref|YP_886423.1| NADH dehydrogenase subunit B [Myco... 348 2e-94
gi|108798549|ref|YP_638746.1| NADH dehydrogenase subunit B [Myco... 346 9e-94
gi|118617947|ref|YP_906279.1| NADH dehydrogenase subunit B [Myco... 339 9e-92
gi|240169669|ref|ZP_04748328.1| NADH dehydrogenase subunit B [My... 338 2e-91
gi|169629221|ref|YP_001702870.1| NADH dehydrogenase subunit B [M... 335 2e-90
gi|333922079|ref|YP_004495660.1| NADH-quinone oxidoreductase sub... 328 2e-88
gi|262200419|ref|YP_003271627.1| NADH-quinone oxidoreductase sub... 324 4e-87
gi|308232348|ref|ZP_07415800.2| NADH dehydrogenase subunit I B n... 323 9e-87
gi|343926374|ref|ZP_08765879.1| NADH-quinone oxidoreductase subu... 323 1e-86
gi|333991500|ref|YP_004524114.1| NADH dehydrogenase I (chain B) ... 315 2e-84
gi|111022873|ref|YP_705845.1| NADH dehydrogenase subunit B [Rhod... 311 3e-83
gi|226365381|ref|YP_002783164.1| NADH dehydrogenase subunit B [R... 310 6e-83
gi|319950452|ref|ZP_08024366.1| NADH dehydrogenase subunit B [Di... 310 7e-83
gi|72163093|ref|YP_290750.1| NADH dehydrogenase subunit B [Therm... 309 1e-82
gi|256396791|ref|YP_003118355.1| NADH-quinone oxidoreductase sub... 308 3e-82
gi|326382762|ref|ZP_08204452.1| NADH dehydrogenase subunit B [Go... 306 9e-82
gi|54024635|ref|YP_118877.1| NADH dehydrogenase subunit B [Nocar... 306 1e-81
gi|296140852|ref|YP_003648095.1| NADH-quinone oxidoreductase sub... 302 1e-80
gi|117927477|ref|YP_872028.1| NADH dehydrogenase subunit B [Acid... 302 2e-80
gi|226306213|ref|YP_002766173.1| NADH-quinone oxidoreductase cha... 301 4e-80
gi|284034168|ref|YP_003384099.1| NADH-quinone oxidoreductase sub... 301 4e-80
gi|311744393|ref|ZP_07718195.1| NADH-quinone oxidoreductase subu... 298 2e-79
gi|312139310|ref|YP_004006646.1| NADH dehydrogenase (quinone) ch... 298 3e-79
gi|326329611|ref|ZP_08195933.1| NADH dehydrogenase I, B subunit ... 296 6e-79
gi|311897891|dbj|BAJ30299.1| putative NADH-quinone oxidoreductas... 294 4e-78
gi|119714785|ref|YP_921750.1| NADH dehydrogenase subunit B [Noca... 294 5e-78
gi|271962156|ref|YP_003336352.1| NADH dehydrogenase (quinone) [S... 293 8e-78
gi|317123846|ref|YP_004097958.1| NADH dehydrogenase subunit B [I... 291 4e-77
gi|297563968|ref|YP_003682941.1| NADH-quinone oxidoreductase, B ... 291 4e-77
gi|296130550|ref|YP_003637800.1| NADH-quinone oxidoreductase, B ... 290 5e-77
gi|296268274|ref|YP_003650906.1| NADH-quinone oxidoreductase sub... 290 5e-77
gi|291437937|ref|ZP_06577327.1| NuoB [Streptomyces ghanaensis AT... 288 2e-76
gi|328884313|emb|CCA57552.1| NADH-ubiquinone oxidoreductase chai... 288 2e-76
gi|302559106|ref|ZP_07311448.1| NADH-quinone oxidoreductase, B s... 288 3e-76
gi|21222946|ref|NP_628725.1| NADH dehydrogenase subunit B [Strep... 288 3e-76
gi|291452006|ref|ZP_06591396.1| NuoB [Streptomyces albus J1074] ... 287 6e-76
gi|294630797|ref|ZP_06709357.1| NADH-quinone oxidoreductase, B s... 286 1e-75
gi|297201624|ref|ZP_06919021.1| NADH dehydrogenase subunit B [St... 286 1e-75
gi|297192787|ref|ZP_06910185.1| NADH dehydrogenase subunit B (Nu... 286 1e-75
gi|29831381|ref|NP_826015.1| NADH dehydrogenase subunit B [Strep... 286 1e-75
gi|291298799|ref|YP_003510077.1| NADH-quinone oxidoreductase sub... 286 1e-75
gi|290958259|ref|YP_003489441.1| NADH dehydrogenase subunit NuoB... 285 1e-75
>gi|15610282|ref|NP_217662.1| NADH dehydrogenase subunit B [Mycobacterium tuberculosis H37Rv]
gi|15842722|ref|NP_337759.1| NADH dehydrogenase subunit B [Mycobacterium tuberculosis CDC1551]
gi|31794322|ref|NP_856815.1| NADH dehydrogenase subunit B [Mycobacterium bovis AF2122/97]
63 more sequence titles
Length=184
Score = 375 bits (963), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 183/184 (99%), Positives = 184/184 (100%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF
Sbjct 1 MGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR
Sbjct 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|289751824|ref|ZP_06511202.1| LOW QUALITY PROTEIN: NADH dehydrogenase subunit I B nuoB [Mycobacterium
tuberculosis T92]
gi|289692411|gb|EFD59840.1| LOW QUALITY PROTEIN: NADH dehydrogenase subunit I B nuoB [Mycobacterium
tuberculosis T92]
Length=185
Score = 374 bits (961), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 183/184 (99%), Positives = 184/184 (100%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF
Sbjct 1 MGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR
Sbjct 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|298526620|ref|ZP_07014029.1| NADH dehydrogenase I, B subunit [Mycobacterium tuberculosis 94_M4241A]
gi|298496414|gb|EFI31708.1| NADH dehydrogenase I, B subunit [Mycobacterium tuberculosis 94_M4241A]
Length=184
Score = 373 bits (958), Expect = 6e-102, Method: Compositional matrix adjust.
Identities = 182/184 (99%), Positives = 183/184 (99%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEEQLPGGILLS VEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF
Sbjct 1 MGLEEQLPGGILLSNVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR
Sbjct 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|41409300|ref|NP_962136.1| NADH dehydrogenase subunit B [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465722|ref|YP_883186.1| NADH dehydrogenase subunit B [Mycobacterium avium 104]
gi|254776456|ref|ZP_05217972.1| NADH dehydrogenase subunit B [Mycobacterium avium subsp. avium
ATCC 25291]
7 more sequence titles
Length=184
Score = 367 bits (942), Expect = 4e-100, Method: Compositional matrix adjust.
Identities = 178/184 (97%), Positives = 182/184 (99%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF
Sbjct 1 MGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLL+AILKLHEKIQQMPLG+NRE AIAEAE+AAL ARPTIEMR
Sbjct 121 HVVPVDIYLPGCPPRPEMLLYAILKLHEKIQQMPLGVNRETAIAEAEQAALSARPTIEMR 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|342861054|ref|ZP_08717703.1| NADH dehydrogenase subunit B [Mycobacterium colombiense CECT
3035]
gi|342131498|gb|EGT84768.1| NADH dehydrogenase subunit B [Mycobacterium colombiense CECT
3035]
Length=184
Score = 365 bits (937), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/184 (96%), Positives = 182/184 (99%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF
Sbjct 1 MGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYA+VQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAVVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLL+AILKLHEKIQ+MPLG+NRE AIAEAE+AAL ARPTIEMR
Sbjct 121 HVVPVDIYLPGCPPRPEMLLYAILKLHEKIQEMPLGVNRETAIAEAEQAALSARPTIEMR 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|254821135|ref|ZP_05226136.1| NADH dehydrogenase subunit B [Mycobacterium intracellulare ATCC
13950]
Length=184
Score = 365 bits (936), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 177/184 (97%), Positives = 182/184 (99%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF
Sbjct 1 MGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLL+AILKLHEKIQ+MPLG+NRE AIAEAE+AAL ARPTIEMR
Sbjct 121 HVVPVDIYLPGCPPRPEMLLYAILKLHEKIQEMPLGVNREDAIAEAEQAALSARPTIEMR 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|145225061|ref|YP_001135739.1| NADH dehydrogenase subunit B [Mycobacterium gilvum PYR-GCK]
gi|315445430|ref|YP_004078309.1| NADH dehydrogenase subunit B [Mycobacterium sp. Spyr1]
gi|238065177|sp|A4TDB9.1|NUOB_MYCGI RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|145217547|gb|ABP46951.1| NADH dehydrogenase subunit B [Mycobacterium gilvum PYR-GCK]
gi|315263733|gb|ADU00475.1| NADH dehydrogenase subunit B [Mycobacterium sp. Spyr1]
Length=184
Score = 353 bits (905), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 168/184 (92%), Positives = 178/184 (97%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LPGGILLSTVEKVAGYVRK SLWPATFGLACCAIEMMATAGPRFDI+RFGMERF
Sbjct 1 MGLEEKLPGGILLSTVEKVAGYVRKGSLWPATFGLACCAIEMMATAGPRFDISRFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYA+VQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAVVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLLHAILKLH+KIQQMPLG+NRE AI EAE+AA+ PTIE++
Sbjct 121 HVVPVDIYLPGCPPRPEMLLHAILKLHDKIQQMPLGVNREEAIREAEQAAMALTPTIELK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|120402882|ref|YP_952711.1| NADH dehydrogenase subunit B [Mycobacterium vanbaalenii PYR-1]
gi|238065183|sp|A1T6A5.1|NUOB_MYCVP RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|119955700|gb|ABM12705.1| NADH dehydrogenase subunit B [Mycobacterium vanbaalenii PYR-1]
Length=184
Score = 352 bits (904), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/184 (92%), Positives = 177/184 (97%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LPGGILLSTVEKVAGYVRK SLWPATFGLACCAIEMMATAGPRFDI+RFGMERF
Sbjct 1 MGLEERLPGGILLSTVEKVAGYVRKGSLWPATFGLACCAIEMMATAGPRFDISRFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYA+VQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAVVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLLHAILKLH+KIQQMPLG+NRE AI EAE AAL PTIE++
Sbjct 121 HVVPVDIYLPGCPPRPEMLLHAILKLHDKIQQMPLGVNREEAIREAERAALAVTPTIELK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|118467443|ref|YP_886423.1| NADH dehydrogenase subunit B [Mycobacterium smegmatis str. MC2
155]
gi|238065179|sp|A0QU35.1|NUOB_MYCS2 RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|118168730|gb|ABK69626.1| NADH-quinone oxidoreductase, B subunit [Mycobacterium smegmatis
str. MC2 155]
Length=184
Score = 348 bits (894), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 167/184 (91%), Positives = 176/184 (96%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LPGGILLSTVE VAGYVRK SLWPATFGLACCAIEMM+TAGPRFDIARFGMERF
Sbjct 1 MGLEERLPGGILLSTVETVAGYVRKGSLWPATFGLACCAIEMMSTAGPRFDIARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQM EPKWVLAMGVCASSGGMFNNYA+VQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMVEPKWVLAMGVCASSGGMFNNYAVVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLLHAILKLH+KIQQMPLG+NRE AI EAE+AAL PTIE++
Sbjct 121 HVVPVDIYLPGCPPRPEMLLHAILKLHDKIQQMPLGVNREEAIREAEQAALAVPPTIELK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|108798549|ref|YP_638746.1| NADH dehydrogenase subunit B [Mycobacterium sp. MCS]
gi|126434147|ref|YP_001069838.1| NADH dehydrogenase subunit B [Mycobacterium sp. JLS]
gi|122977218|sp|Q1BBP4.1|NUOB_MYCSS RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|238065180|sp|A3PWS0.1|NUOB_MYCSJ RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|108768968|gb|ABG07690.1| NADH dehydrogenase subunit B [Mycobacterium sp. MCS]
gi|126233947|gb|ABN97347.1| NADH dehydrogenase subunit B [Mycobacterium sp. JLS]
Length=184
Score = 346 bits (887), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 166/184 (91%), Positives = 176/184 (96%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LPGGILLSTVEKVAGYVR SLWPATFGLACCAIEMM+TAGPRFDI+RFGMERF
Sbjct 1 MGLEERLPGGILLSTVEKVAGYVRAGSLWPATFGLACCAIEMMSTAGPRFDISRFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLLHAI+KLHEKIQQMPLG+NR+ AI EAE+AAL TIE++
Sbjct 121 HVVPVDIYLPGCPPRPEMLLHAIIKLHEKIQQMPLGVNRDEAIREAEQAALAVPSTIELK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|118617947|ref|YP_906279.1| NADH dehydrogenase subunit B [Mycobacterium ulcerans Agy99]
gi|183981497|ref|YP_001849788.1| NADH dehydrogenase I (chain B) NuoB (NADH- ubiquinone oxidoreductase
chain B) [Mycobacterium marinum M]
gi|238065178|sp|B2HGE7.1|NUOB_MYCMM RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|238065182|sp|A0PR39.1|NUOB_MYCUA RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|118570057|gb|ABL04808.1| NADH dehydrogenase I (chain B) NuoB (NADH- ubiquinone oxidoreductase
chain B) [Mycobacterium ulcerans Agy99]
gi|183174823|gb|ACC39933.1| NADH dehydrogenase I (chain B) NuoB (NADH- ubiquinone oxidoreductase
chain B) [Mycobacterium marinum M]
Length=184
Score = 339 bits (870), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 180/184 (98%), Positives = 184/184 (100%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF
Sbjct 1 MGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQ+MPLG+NRERAIAEAEEAA+LARPTIEMR
Sbjct 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQEMPLGVNRERAIAEAEEAAMLARPTIEMR 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|240169669|ref|ZP_04748328.1| NADH dehydrogenase subunit B [Mycobacterium kansasii ATCC 12478]
Length=184
Score = 338 bits (867), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/184 (98%), Positives = 184/184 (100%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFD+ARFGMERF
Sbjct 1 MGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDLARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQ+MPLG+NRERAIAEAEEAALLARPTIEMR
Sbjct 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQEMPLGVNRERAIAEAEEAALLARPTIEMR 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|169629221|ref|YP_001702870.1| NADH dehydrogenase subunit B [Mycobacterium abscessus ATCC 19977]
gi|238065175|sp|B1MPG5.1|NUOB_MYCA9 RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|169241188|emb|CAM62216.1| NADH-quinone oxidoreductase, B subunit NuoB [Mycobacterium abscessus]
Length=184
Score = 335 bits (858), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 165/184 (90%), Positives = 170/184 (93%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LLSTVE +AGYVRK SLWPATFGLACCAIEMM+TAGPRFDIARFGMERF
Sbjct 1 MGLEEKLPSGFLLSTVETLAGYVRKGSLWPATFGLACCAIEMMSTAGPRFDIARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLLHAILKLHEKI MPLG NRE I E E AAL A PTIEM+
Sbjct 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIAHMPLGANREEVIRETEAAALAATPTIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|333922079|ref|YP_004495660.1| NADH-quinone oxidoreductase subunit B [Amycolicicoccus subflavus
DQS3-9A1]
gi|333484300|gb|AEF42860.1| NADH-quinone oxidoreductase subunit B [Amycolicicoccus subflavus
DQS3-9A1]
Length=184
Score = 328 bits (842), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 152/184 (83%), Positives = 173/184 (95%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE++P G LLSTVE++AGY+RK SLWPATFGLACCAIEMMAT+G R+D+ARFGME F
Sbjct 1 MGLEEKVPSGFLLSTVEQLAGYMRKGSLWPATFGLACCAIEMMATSGGRYDLARFGMEAF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQ+YDQM EPKWVL+MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQVYDQMVEPKWVLSMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLLHAILKLH+KIQ+MPLG+NR+ A+ AE+AAL +RPTIE++
Sbjct 121 HVVPVDIYLPGCPPRPEMLLHAILKLHDKIQEMPLGVNRDEAVRAAEQAALASRPTIELK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|262200419|ref|YP_003271627.1| NADH-quinone oxidoreductase subunit B [Gordonia bronchialis DSM
43247]
gi|262083766|gb|ACY19734.1| NADH-quinone oxidoreductase, B subunit [Gordonia bronchialis
DSM 43247]
Length=184
Score = 324 bits (830), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 155/184 (85%), Positives = 169/184 (92%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LLSTVE++AG++RK SLWPATFGLACCAIEMMAT R+D+ARFGME F
Sbjct 1 MGLEERLPSGFLLSTVEELAGFMRKGSLWPATFGLACCAIEMMATTSGRYDLARFGMEAF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQIYDQM EPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQIYDQMVEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLL+AILKLHEKIQ+MPLG+NR+ AI AE AAL A PTIEM+
Sbjct 121 HVVPVDIYLPGCPPRPEMLLNAILKLHEKIQEMPLGVNRDEAIWAAERAALQATPTIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|308232348|ref|ZP_07415800.2| NADH dehydrogenase subunit I B nuoB [Mycobacterium tuberculosis
SUMu001]
gi|308370160|ref|ZP_07420526.2| NADH dehydrogenase subunit I B nuoB [Mycobacterium tuberculosis
SUMu002]
gi|308371244|ref|ZP_07424331.2| NADH dehydrogenase subunit I B nuoB [Mycobacterium tuberculosis
SUMu003]
15 more sequence titles
Length=157
Score = 323 bits (827), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 156/157 (99%), Positives = 157/157 (100%), Gaps = 0/157 (0%)
Query 28 LWPATFGLACCAIEMMATAGPRFDIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQI 87
+WPATFGLACCAIEMMATAGPRFDIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQI
Sbjct 1 MWPATFGLACCAIEMMATAGPRFDIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQI 60
Query 88 YDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLH 147
YDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLH
Sbjct 61 YDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVDHVVPVDIYLPGCPPRPEMLLHAILKLH 120
Query 148 EKIQQMPLGINRERAIAEAEEAALLARPTIEMRGLLR 184
EKIQQMPLGINRERAIAEAEEAALLARPTIEMRGLLR
Sbjct 121 EKIQQMPLGINRERAIAEAEEAALLARPTIEMRGLLR 157
>gi|343926374|ref|ZP_08765879.1| NADH-quinone oxidoreductase subunit B [Gordonia alkanivorans
NBRC 16433]
gi|343763612|dbj|GAA12805.1| NADH-quinone oxidoreductase subunit B [Gordonia alkanivorans
NBRC 16433]
Length=184
Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/184 (84%), Positives = 168/184 (92%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LLSTVE +AG++RK SLWPATFGLACCAIEMM+T R+D+ARFGME F
Sbjct 1 MGLEERLPSGFLLSTVEDLAGFMRKGSLWPATFGLACCAIEMMSTTSGRYDLARFGMEAF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQIYDQM EPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQIYDQMVEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLL+AILKLHEKIQ+MPLG+NRE AI AE AAL + PTIEM+
Sbjct 121 HVVPVDIYLPGCPPRPEMLLNAILKLHEKIQEMPLGVNREEAIWAAERAALQSTPTIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|333991500|ref|YP_004524114.1| NADH dehydrogenase I (chain B) NuoB (NADH- ubiquinone oxidoreductase
chain B) [Mycobacterium sp. JDM601]
gi|333487468|gb|AEF36860.1| NADH dehydrogenase I (chain B) NuoB (NADH- ubiquinone oxidoreductase
chain B) [Mycobacterium sp. JDM601]
Length=184
Score = 315 bits (807), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/184 (82%), Positives = 164/184 (90%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEEQLP G+LLSTVE +AGY RK SLWPATFGLACCAIEMM++ P +DI+RFGME F
Sbjct 1 MGLEEQLPSGLLLSTVEDLAGYFRKGSLWPATFGLACCAIEMMSSMAPDYDISRFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQIYDQM EPKWVL+MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQIYDQMVEPKWVLSMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEML++AILKLHEKI+ MPLG NRE+ I EEAAL A T +MR
Sbjct 121 HVVPVDIYLPGCPPRPEMLMYAILKLHEKIRDMPLGANREQVITATEEAALSAPSTWQMR 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|111022873|ref|YP_705845.1| NADH dehydrogenase subunit B [Rhodococcus jostii RHA1]
gi|122955232|sp|Q0S449.1|NUOB_RHOSR RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|110822403|gb|ABG97687.1| probable NADH dehydrogenase subunit B [Rhodococcus jostii RHA1]
Length=184
Score = 311 bits (797), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 154/184 (84%), Positives = 168/184 (92%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+G+EE+LP G LL+TVE +AGYVRK SLWPA+FGLACCAIEMMATAG RFDIARFGME F
Sbjct 1 MGIEEKLPSGFLLTTVEGLAGYVRKGSLWPASFGLACCAIEMMATAGGRFDIARFGMEAF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQIYDQM EPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQIYDQMVEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEMLL+AIL LHEKIQQMPLG++RE AE+AAL A PTI+M+
Sbjct 121 HIVPVDIYLPGCPPRPEMLLNAILTLHEKIQQMPLGVHREEVARAAEQAALAATPTIQMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|226365381|ref|YP_002783164.1| NADH dehydrogenase subunit B [Rhodococcus opacus B4]
gi|254767797|sp|C1AYM4.1|NUOB_RHOOB RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|226243871|dbj|BAH54219.1| NADH-quinone oxidoreductase chain B [Rhodococcus opacus B4]
Length=184
Score = 310 bits (794), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/184 (84%), Positives = 168/184 (92%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+G+EE+LP G LL+TVE +AGYVRK SLWPA+FGLACCAIEMMATAG RFDIARFGME F
Sbjct 1 MGIEEKLPSGFLLTTVEGLAGYVRKGSLWPASFGLACCAIEMMATAGGRFDIARFGMEAF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQIYDQM EPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQIYDQMVEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEMLL+AIL LHEKIQQMPLG++R+ AE+AAL A PTI+M+
Sbjct 121 HIVPVDIYLPGCPPRPEMLLNAILTLHEKIQQMPLGVHRDEVARAAEQAALAATPTIQMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|319950452|ref|ZP_08024366.1| NADH dehydrogenase subunit B [Dietzia cinnamea P4]
gi|319435875|gb|EFV91081.1| NADH dehydrogenase subunit B [Dietzia cinnamea P4]
Length=184
Score = 310 bits (793), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 145/184 (79%), Positives = 164/184 (90%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE++AGY+RK SLWPATFGLACCAIEMMAT+G R+D+ARFG E F
Sbjct 1 MGLEEKLPAGFLLTTVEQLAGYMRKGSLWPATFGLACCAIEMMATSGGRYDLARFGTEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQ+YDQMAEPKWVL+MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQVYDQMAEPKWVLSMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEML+HAI+ LH+KIQ MPLG NR AI AE+AAL RP I +
Sbjct 121 HIVPVDIYLPGCPPRPEMLMHAIITLHDKIQNMPLGANRAEAIRAAEQAALDERPLIPVE 180
Query 181 GLLR 184
G+ R
Sbjct 181 GMFR 184
>gi|72163093|ref|YP_290750.1| NADH dehydrogenase subunit B [Thermobifida fusca YX]
gi|123628754|sp|Q47LE5.1|NUOB_THEFY RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|71916825|gb|AAZ56727.1| NADH dehydrogenase (ubiquinone), 20 kDa subunit [Thermobifida
fusca YX]
Length=185
Score = 309 bits (791), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 144/178 (81%), Positives = 160/178 (90%), Gaps = 0/178 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G+LL+TVE++ G+VRK S+WPATFGLACCAIEMMA GPRFDIARFGMERF
Sbjct 1 MGLEEKLPSGVLLTTVEQIVGFVRKTSMWPATFGLACCAIEMMAAGGPRFDIARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLR IYDQMAEPKWV+AMGVCASSGGMFNNYAIVQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRTIYDQMAEPKWVIAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIE 178
H+VPVDIYLPGCPPRPEMLL AILKLH+K+Q LG++RER I E E+ L A P I+
Sbjct 121 HIVPVDIYLPGCPPRPEMLLDAILKLHDKVQNTKLGVHREREIEELEQRRLRALPLIQ 178
>gi|256396791|ref|YP_003118355.1| NADH-quinone oxidoreductase subunit beta [Catenulispora acidiphila
DSM 44928]
gi|256363017|gb|ACU76514.1| NADH-quinone oxidoreductase, B subunit [Catenulispora acidiphila
DSM 44928]
Length=184
Score = 308 bits (788), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/184 (83%), Positives = 170/184 (93%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE +AGY+RK+S+WPATFGLACCAIEMMAT R+D+ARFGMERF
Sbjct 1 MGLEEKLPAGFLLTTVEGLAGYMRKSSVWPATFGLACCAIEMMATGAGRYDLARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPVLRQ+YDQMA PKWV+AMGVCASSGGMFNNYAIVQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVLRQVYDQMANPKWVIAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEMLL AILKLHE+IQ MPLG+NR++A EAE+AA+ A+PTI M
Sbjct 121 HIVPVDIYLPGCPPRPEMLLDAILKLHEQIQSMPLGVNRKKAAEEAEKAAMNAKPTILME 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|326382762|ref|ZP_08204452.1| NADH dehydrogenase subunit B [Gordonia neofelifaecis NRRL B-59395]
gi|326198352|gb|EGD55536.1| NADH dehydrogenase subunit B [Gordonia neofelifaecis NRRL B-59395]
Length=184
Score = 306 bits (784), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 154/184 (84%), Positives = 168/184 (92%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEEQLPGG +LSTVE +AGY RK SLWPATFGLACCAIEMMAT R+D+ARFGME F
Sbjct 1 MGLEEQLPGGFVLSTVESLAGYFRKGSLWPATFGLACCAIEMMATTAGRYDLARFGMEAF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLL+AIL+LH++IQQMPLG++R+ AI AE AAL A TIEM+
Sbjct 121 HVVPVDIYLPGCPPRPEMLLNAILELHDQIQQMPLGVHRDEAIRAAEAAALSAPATIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|54024635|ref|YP_118877.1| NADH dehydrogenase subunit B [Nocardia farcinica IFM 10152]
gi|81602742|sp|Q5YWC8.1|NUOB_NOCFA RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|54016143|dbj|BAD57513.1| putative NADH dehydrogenase I chain B [Nocardia farcinica IFM
10152]
Length=184
Score = 306 bits (783), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/184 (83%), Positives = 164/184 (90%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LLSTVE AGY+RK S+WPATFGLACCAIEMMAT RFDIARFGME F
Sbjct 1 MGLEEKLPSGFLLSTVESFAGYLRKGSVWPATFGLACCAIEMMATGAGRFDIARFGMEAF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQ+YDQMAEPKWVLAMGVCASSGGMFNNYA+VQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQVYDQMAEPKWVLAMGVCASSGGMFNNYAVVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLL+AIL LH+KIQ PLG+NR+ A+ AE+AAL A PTI M
Sbjct 121 HVVPVDIYLPGCPPRPEMLLNAILALHDKIQHTPLGVNRQEAVRAAEQAALAATPTIRME 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|296140852|ref|YP_003648095.1| NADH-quinone oxidoreductase subunit beta [Tsukamurella paurometabola
DSM 20162]
gi|296028986|gb|ADG79756.1| NADH-quinone oxidoreductase, B subunit [Tsukamurella paurometabola
DSM 20162]
Length=184
Score = 302 bits (774), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/184 (81%), Positives = 166/184 (91%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLE+++PGG LLST+E VAGY RK SLWPATFGLACCAIEMMAT GPRFDIARFGME F
Sbjct 1 MGLEDKVPGGFLLSTLETVAGYARKGSLWPATFGLACCAIEMMATTGPRFDIARFGMEAF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQ+YDQMAEPKWVLAMGVCASSGGMFNNYA+VQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQVYDQMAEPKWVLAMGVCASSGGMFNNYAVVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLL+A++ LH+K+ P+G +RE A AEEAAL RPTIE++
Sbjct 121 HVVPVDIYLPGCPPRPEMLLNALIALHDKVADTPMGSHREEARRAAEEAALNTRPTIELK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|117927477|ref|YP_872028.1| NADH dehydrogenase subunit B [Acidothermus cellulolyticus 11B]
gi|238065066|sp|A0LRI2.1|NUOB_ACIC1 RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|117647940|gb|ABK52042.1| NADH dehydrogenase subunit B [Acidothermus cellulolyticus 11B]
Length=184
Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/184 (79%), Positives = 161/184 (88%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+G+EE++PGG LL+TVEK G+VRK+SLWPATFGLACCAIEMMAT R+D+ARFGME F
Sbjct 1 MGIEEKIPGGFLLTTVEKAVGWVRKSSLWPATFGLACCAIEMMATGAGRYDLARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQIYDQM EPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQIYDQMPEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVD+YLPGCPPRPEML+HAIL+LHEKI+ LG++ R E EEAA A PT M+
Sbjct 121 HVVPVDMYLPGCPPRPEMLMHAILELHEKIKSTKLGVHAVREAHEREEAAKHALPTHSMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|226306213|ref|YP_002766173.1| NADH-quinone oxidoreductase chain B [Rhodococcus erythropolis
PR4]
gi|229490898|ref|ZP_04384733.1| NADH-quinone oxidoreductase subunit b [Rhodococcus erythropolis
SK121]
gi|259514682|sp|C0ZYJ9.1|NUOB_RHOE4 RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|226185330|dbj|BAH33434.1| NADH-quinone oxidoreductase chain B [Rhodococcus erythropolis
PR4]
gi|229322288|gb|EEN88074.1| NADH-quinone oxidoreductase subunit b [Rhodococcus erythropolis
SK121]
Length=184
Score = 301 bits (770), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/184 (81%), Positives = 166/184 (91%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE +AGY RK SLWPATFGLACCAIEMMAT RFD+ARFGME F
Sbjct 1 MGLEEKLPSGFLLTTVEGLAGYARKGSLWPATFGLACCAIEMMATTSGRFDLARFGMEAF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADL+IVAGRVSQKM PVLRQ+YDQMAEPKWVLAMGVCASSGGMFNNYA+VQGVD
Sbjct 61 RASPRQADLLIVAGRVSQKMGPVLRQVYDQMAEPKWVLAMGVCASSGGMFNNYAVVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEMLL+AI++LH KIQ+MPLG+NRE A A AE AAL + PTI+M+
Sbjct 121 HIVPVDIYLPGCPPRPEMLLNAIIELHRKIQEMPLGVNREEARAAAERAALASTPTIDMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|284034168|ref|YP_003384099.1| NADH-quinone oxidoreductase subunit B [Kribbella flavida DSM
17836]
gi|283813461|gb|ADB35300.1| NADH-quinone oxidoreductase, B subunit [Kribbella flavida DSM
17836]
Length=184
Score = 301 bits (770), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 142/184 (78%), Positives = 160/184 (87%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+G+EEQLP G+LL+T+E ++GY+RK SLWPATFGLACCAIEMM T PR+D ARFGME F
Sbjct 1 MGVEEQLPAGVLLTTIEGLSGYMRKASLWPATFGLACCAIEMMTTGAPRYDAARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQIYDQM PKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQIYDQMPNPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVD+YLPGCPPRPEMLL A LKLH+ IQ LG +++ AE E+AAL A PT+EM+
Sbjct 121 HVVPVDMYLPGCPPRPEMLLDAFLKLHDDIQHGKLGAHKKALQAEQEQAALTAAPTLEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|311744393|ref|ZP_07718195.1| NADH-quinone oxidoreductase subunit B [Aeromicrobium marinum
DSM 15272]
gi|311312359|gb|EFQ82274.1| NADH-quinone oxidoreductase subunit B [Aeromicrobium marinum
DSM 15272]
Length=184
Score = 298 bits (763), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/184 (78%), Positives = 157/184 (86%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G+LLSTVE +AGY RK S WPATFGLACCAIEMM PR+D +RFGME F
Sbjct 1 MGLEEKLPSGVLLSTVEDLAGYFRKASFWPATFGLACCAIEMMTFGAPRYDSSRFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
+PRQADLMIVAGRVS KMAPVLRQIYDQMAEPK+VLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 RPSPRQADLMIVAGRVSNKMAPVLRQIYDQMAEPKYVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVD+YLPGCPPRPEML+ AILKLH+KIQ LG +R IAE E AALLA PT M+
Sbjct 121 HVVPVDMYLPGCPPRPEMLIDAILKLHDKIQTGKLGAHRATEIAEIERAALLAEPTSAMK 180
Query 181 GLLR 184
GL+R
Sbjct 181 GLMR 184
>gi|312139310|ref|YP_004006646.1| NADH dehydrogenase (quinone) chain b nuob [Rhodococcus equi 103S]
gi|325673384|ref|ZP_08153075.1| NADH-quinone oxidoreductase subunit B [Rhodococcus equi ATCC
33707]
gi|311888649|emb|CBH47961.1| NADH dehydrogenase (quinone) chain B NuoB [Rhodococcus equi 103S]
gi|325555405|gb|EGD25076.1| NADH-quinone oxidoreductase subunit B [Rhodococcus equi ATCC
33707]
Length=190
Score = 298 bits (762), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/179 (82%), Positives = 158/179 (89%), Gaps = 0/179 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE++PGG LLSTVE VAGY RK SLWPATFGLACCAIEMMAT R+D+ARFGME F
Sbjct 1 MGLEEKVPGGFLLSTVETVAGYARKGSLWPATFGLACCAIEMMATTSGRYDLARFGMEAF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQ+YDQM EPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQVYDQMVEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEM 179
HVVPVDIYLPGCPPRPEMLL AIL LH KIQ PLG+NRE A+ AE AAL ARP +++
Sbjct 121 HVVPVDIYLPGCPPRPEMLLDAILALHAKIQDTPLGVNREEAVRAAETAALAARPVVDL 179
>gi|326329611|ref|ZP_08195933.1| NADH dehydrogenase I, B subunit [Nocardioidaceae bacterium Broad-1]
gi|325952607|gb|EGD44625.1| NADH dehydrogenase I, B subunit [Nocardioidaceae bacterium Broad-1]
Length=184
Score = 296 bits (759), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 140/184 (77%), Positives = 158/184 (86%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G+LL+TVE +AGY RK SLWPATFGLACCAIEMM + GP++D+AR+GME F
Sbjct 1 MGLEEKLPSGVLLTTVEGLAGYFRKASLWPATFGLACCAIEMMTSGGPKYDLARYGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQIYDQM EPKWVLAMGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQIYDQMPEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVD+YLPGCPPRPEML+ AILKLH+KIQ LG+N ER + E AL P I+
Sbjct 121 HIVPVDMYLPGCPPRPEMLIDAILKLHDKIQHGSLGVNAEREDIDNEAVALRQLPLIDQT 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|311897891|dbj|BAJ30299.1| putative NADH-quinone oxidoreductase subunit B [Kitasatospora
setae KM-6054]
Length=184
Score = 294 bits (752), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 140/184 (77%), Positives = 158/184 (86%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+G+EE+LP G LL++VE AG+VRK SL+PATFGLACCAIEMM T R+D+ARFGME F
Sbjct 1 MGIEEKLPSGFLLTSVEAAAGWVRKASLFPATFGLACCAIEMMTTGAGRYDLARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
+PRQADLMIVAGRVSQKMAPVLRQ+YDQM PKWV++MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RGSPRQADLMIVAGRVSQKMAPVLRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEMLL AI+KLHEKIQ LG+++ RA EAE AL A PT EMR
Sbjct 121 HIVPVDIYLPGCPPRPEMLLDAIIKLHEKIQHEKLGVHKRRAEEEAERLALQAVPTSEMR 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|119714785|ref|YP_921750.1| NADH dehydrogenase subunit B [Nocardioides sp. JS614]
gi|238065185|sp|A1SE28.1|NUOB_NOCSJ RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit
B
gi|119535446|gb|ABL80063.1| NADH dehydrogenase subunit B [Nocardioides sp. JS614]
Length=184
Score = 294 bits (752), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 137/184 (75%), Positives = 158/184 (86%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+G+EE+LP G+LLSTVE +AGY+RK S WPA+FGLACCAIEMM + GP+ D+ RFGME F
Sbjct 1 MGIEEKLPSGVLLSTVEGLAGYMRKASFWPASFGLACCAIEMMTSGGPKHDLGRFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQAD+MIVAGRVSQKMAPVLRQIYDQM EPKWVLAMGVCASSGGMFNNYA+VQGVD
Sbjct 61 RASPRQADVMIVAGRVSQKMAPVLRQIYDQMPEPKWVLAMGVCASSGGMFNNYAVVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVD+YLPGCPPRP+ML+ AILKLH+K+Q +G +R I E E AAL A PT EM+
Sbjct 121 HVVPVDMYLPGCPPRPQMLIDAILKLHDKVQHTKMGAHRAAEIEELETAALRALPTSEMK 180
Query 181 GLLR 184
G LR
Sbjct 181 GQLR 184
>gi|271962156|ref|YP_003336352.1| NADH dehydrogenase (quinone) [Streptosporangium roseum DSM 43021]
gi|270505331|gb|ACZ83609.1| NADH dehydrogenase (quinone) [Streptosporangium roseum DSM 43021]
Length=183
Score = 293 bits (750), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 137/178 (77%), Positives = 156/178 (88%), Gaps = 0/178 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G +LSTVE+VAG+ RKNS+WPATFGLACCAIE+M+T GP+ D+ARFGMER
Sbjct 1 MGLEEKLPSGFMLSTVEQVAGWARKNSVWPATFGLACCAIELMSTGGPKHDLARFGMERA 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SA+PRQADLMIVAGR+SQKMAPVLRQIYDQMAEPKWV+AMGVCASSGGMFNNYAIVQGVD
Sbjct 61 SASPRQADLMIVAGRLSQKMAPVLRQIYDQMAEPKWVIAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIE 178
HVVPVDIYLPGCPPRPEML+ AI+KLH+KIQ G +R + I E E AL P I+
Sbjct 121 HVVPVDIYLPGCPPRPEMLIDAIVKLHDKIQNTKFGAHRAKQIDELELQALRTLPLID 178
>gi|317123846|ref|YP_004097958.1| NADH dehydrogenase subunit B [Intrasporangium calvum DSM 43043]
gi|315587934|gb|ADU47231.1| NADH dehydrogenase subunit B [Intrasporangium calvum DSM 43043]
Length=184
Score = 291 bits (744), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 139/183 (76%), Positives = 162/183 (89%), Gaps = 0/183 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+G+EE+LP G LLSTVE +AGY+RK S+WP TFGLACCAIEMMA P +DIARFGMERF
Sbjct 1 MGIEEKLPAGFLLSTVEGLAGYMRKASMWPVTFGLACCAIEMMAVGTPDYDIARFGMERF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPV+RQ+YDQM PKWV++MGVCASSGGMFNNYAIVQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVVRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H++PVDIYLPGCPPRP+MLL+AI++LH+++Q PLG+NR A AEEAAL A PT +M+
Sbjct 121 HIIPVDIYLPGCPPRPQMLLNAIIELHKQVQSTPLGVNRVAAARAAEEAALQATPTHQMK 180
Query 181 GLL 183
GLL
Sbjct 181 GLL 183
>gi|297563968|ref|YP_003682941.1| NADH-quinone oxidoreductase, B subunit [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848417|gb|ADH70435.1| NADH-quinone oxidoreductase, B subunit [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=181
Score = 291 bits (744), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 134/171 (79%), Positives = 152/171 (89%), Gaps = 0/171 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP GI+L+TVE+V G RK+S+WPATFGLACCAIEMM+ GP +D+ARFGME+F
Sbjct 1 MGLEEKLPSGIMLTTVEQVVGLARKSSMWPATFGLACCAIEMMSVGGPHYDLARFGMEKF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
ATPRQADLMIVAGRVSQKMAPVLRQIYDQM EPKWV+AMGVCASSGGMFNNYAIVQGVD
Sbjct 61 GATPRQADLMIVAGRVSQKMAPVLRQIYDQMPEPKWVIAMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAAL 171
HVVPVD+YLPGCPPRPEMLL A+LKLH+K+Q LG +RE+ I E EE L
Sbjct 121 HVVPVDMYLPGCPPRPEMLLDAVLKLHDKVQNTKLGAHREQEITENEERML 171
>gi|296130550|ref|YP_003637800.1| NADH-quinone oxidoreductase, B subunit [Cellulomonas flavigena
DSM 20109]
gi|296022365|gb|ADG75601.1| NADH-quinone oxidoreductase, B subunit [Cellulomonas flavigena
DSM 20109]
Length=183
Score = 290 bits (743), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 134/180 (75%), Positives = 153/180 (85%), Gaps = 0/180 (0%)
Query 5 EQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERFSATP 64
E+ P G LL+TVE + GY RK SLWP TFGLACCAIEMMA R+DI+R GME F A+P
Sbjct 4 EEAPSGFLLTTVEDLVGYFRKASLWPVTFGLACCAIEMMAAGTSRYDISRLGMEVFRASP 63
Query 65 RQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVDHVVP 124
RQ+DLMIVAGRVSQKMAP++RQ+YDQMA PKWVL+MGVCASSGGMFNNYAIVQGVDH+VP
Sbjct 64 RQSDLMIVAGRVSQKMAPIVRQVYDQMAGPKWVLSMGVCASSGGMFNNYAIVQGVDHIVP 123
Query 125 VDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMRGLLR 184
VDIYLPGCPPRPEMLLHAIL LH++IQ PLG+NR+ A +A+EAA+ A PT M GLLR
Sbjct 124 VDIYLPGCPPRPEMLLHAILALHQQIQDEPLGVNRQEAARKAQEAAMAATPTSHMTGLLR 183
>gi|296268274|ref|YP_003650906.1| NADH-quinone oxidoreductase subunit B [Thermobispora bispora
DSM 43833]
gi|296091061|gb|ADG87013.1| NADH-quinone oxidoreductase, B subunit [Thermobispora bispora
DSM 43833]
Length=183
Score = 290 bits (743), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 135/178 (76%), Positives = 154/178 (87%), Gaps = 0/178 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVEK G+ RKNS+WPATFGLACCAIE+MAT GP+ D+ARFGMER
Sbjct 1 MGLEEKLPSGFLLTTVEKAVGWARKNSVWPATFGLACCAIELMATGGPKHDLARFGMERA 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
SATPRQADLMIVAGRVSQKMAPV+R+IYDQMAEPKWV+AMGVCASSGGMFNNYA+VQGVD
Sbjct 61 SATPRQADLMIVAGRVSQKMAPVVRRIYDQMAEPKWVIAMGVCASSGGMFNNYAVVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIE 178
H+VPVD+YLPGCPPRPEML+ AI+KLH+KIQ M G +R + E E AL P IE
Sbjct 121 HIVPVDVYLPGCPPRPEMLIDAIVKLHDKIQNMKFGAHRAAQLEELERRALRTLPLIE 178
>gi|291437937|ref|ZP_06577327.1| NuoB [Streptomyces ghanaensis ATCC 14672]
gi|291340832|gb|EFE67788.1| NuoB [Streptomyces ghanaensis ATCC 14672]
Length=184
Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/184 (79%), Positives = 162/184 (89%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE+ AG+VRK+S++PATFGLACCAIEMM T R+D+ARFGME F
Sbjct 1 MGLEEKLPSGFLLTTVEQAAGWVRKSSVFPATFGLACCAIEMMTTGAGRYDLARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
+PRQADLMIVAGRVSQKMAPVLRQ+YDQM PKWV++MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RGSPRQADLMIVAGRVSQKMAPVLRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEMLL AILKLH+KIQ LG+N E A EAEEAAL A PTIEM+
Sbjct 121 HVVPVDIYLPGCPPRPEMLLDAILKLHQKIQNSKLGVNAEEAAREAEEAALKALPTIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|328884313|emb|CCA57552.1| NADH-ubiquinone oxidoreductase chain B [Streptomyces venezuelae
ATCC 10712]
Length=184
Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/184 (79%), Positives = 162/184 (89%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE+ AG+VRK S++PATFGLACCAIEMM T R+D+ARFGME F
Sbjct 1 MGLEEKLPSGFLLTTVEQAAGWVRKASVFPATFGLACCAIEMMTTGAGRYDLARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
+PRQADLMIVAGRVSQKMAPVLRQ+YDQM PKWV++MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RGSPRQADLMIVAGRVSQKMAPVLRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEMLL AILKLH+KIQ LG+N E A EAEEAAL ARPTIE++
Sbjct 121 HIVPVDIYLPGCPPRPEMLLDAILKLHQKIQSSKLGVNAEEAAREAEEAALKARPTIELK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|302559106|ref|ZP_07311448.1| NADH-quinone oxidoreductase, B subunit [Streptomyces griseoflavus
Tu4000]
gi|302476724|gb|EFL39817.1| NADH-quinone oxidoreductase, B subunit [Streptomyces griseoflavus
Tu4000]
Length=184
Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/184 (79%), Positives = 162/184 (89%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE+ AG+VRK+S++PATFGLACCAIEMM T R+D+ARFGME F
Sbjct 1 MGLEEKLPSGFLLTTVEQAAGWVRKSSMFPATFGLACCAIEMMTTGAGRYDLARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
+PRQADLMIVAGRVSQKMAPVLRQ+YDQM PKWV++MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RGSPRQADLMIVAGRVSQKMAPVLRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEML+ AILKLH+KIQ LG+N E A EAEEAAL A PTIEM+
Sbjct 121 HVVPVDIYLPGCPPRPEMLMDAILKLHQKIQTSKLGVNAEEAAREAEEAALKALPTIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|21222946|ref|NP_628725.1| NADH dehydrogenase subunit B [Streptomyces coelicolor A3(2)]
gi|329935996|ref|ZP_08285796.1| NADH dehydrogenase subunit B [Streptomyces griseoaurantiacus
M045]
gi|81625663|sp|Q9XAQ5.1|NUOB1_STRCO RecName: Full=NADH-quinone oxidoreductase subunit B 1; AltName:
Full=NADH dehydrogenase I subunit B 1; AltName: Full=NDH-1
subunit B 1
gi|5042276|emb|CAB44530.1| NuoB, NADH dehydrogenase subunit [Streptomyces coelicolor A3(2)]
gi|329304474|gb|EGG48352.1| NADH dehydrogenase subunit B [Streptomyces griseoaurantiacus
M045]
Length=184
Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/184 (79%), Positives = 162/184 (89%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE+ AG+VRK+S++PATFGLACCAIEMM T R+D+ARFGME F
Sbjct 1 MGLEEKLPSGFLLTTVEQAAGWVRKSSVFPATFGLACCAIEMMTTGAGRYDLARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
+PRQADLMIVAGRVSQKMAPVLRQ+YDQM PKWV++MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RGSPRQADLMIVAGRVSQKMAPVLRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
HVVPVDIYLPGCPPRPEML+ AILKLH+KIQ LG+N E A EAEEAAL A PTIEM+
Sbjct 121 HVVPVDIYLPGCPPRPEMLMDAILKLHQKIQSSKLGVNAEEAAREAEEAALKALPTIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|291452006|ref|ZP_06591396.1| NuoB [Streptomyces albus J1074]
gi|291354955|gb|EFE81857.1| NuoB [Streptomyces albus J1074]
Length=184
Score = 287 bits (734), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 141/184 (77%), Positives = 163/184 (89%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE+ AG+VRK+S++PATFGLACCAIEMM T R+D+ARFGME F
Sbjct 1 MGLEEKLPSGFLLTTVEQAAGWVRKSSMFPATFGLACCAIEMMTTGAGRYDLARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
+PRQADLMIVAGRVSQKMAPVLRQ+YDQM PKWV++MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RGSPRQADLMIVAGRVSQKMAPVLRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEML+ AI+KLH+K+Q LG+N+E A EAEEAAL A PTIEM+
Sbjct 121 HIVPVDIYLPGCPPRPEMLVDAIVKLHQKVQSSKLGVNKEEAAREAEEAALKALPTIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|294630797|ref|ZP_06709357.1| NADH-quinone oxidoreductase, B subunit [Streptomyces sp. e14]
gi|292834130|gb|EFF92479.1| NADH-quinone oxidoreductase, B subunit [Streptomyces sp. e14]
Length=184
Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/184 (78%), Positives = 161/184 (88%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE+ AG+VRK S++PATFGLACCAIEMM T R+D+ARFGME F
Sbjct 1 MGLEEKLPSGFLLTTVEQAAGWVRKASVFPATFGLACCAIEMMTTGAGRYDLARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
+PRQADLMIVAGRVSQKMAPVLRQ+YDQM PKWV++MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RGSPRQADLMIVAGRVSQKMAPVLRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEML+ AILKLH+KIQ LG+N E A EAEEAAL A PTIEM+
Sbjct 121 HIVPVDIYLPGCPPRPEMLMDAILKLHQKIQSTKLGVNAEEAAREAEEAALKALPTIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|297201624|ref|ZP_06919021.1| NADH dehydrogenase subunit B [Streptomyces sviceus ATCC 29083]
gi|197711005|gb|EDY55039.1| NADH dehydrogenase subunit B [Streptomyces sviceus ATCC 29083]
Length=184
Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/184 (78%), Positives = 161/184 (88%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE+ AG+VRK S++PATFGLACCAIEMM T R+D+ARFGME F
Sbjct 1 MGLEEKLPSGFLLTTVEQAAGWVRKASVFPATFGLACCAIEMMTTGAGRYDLARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
+PRQADLMIVAGRVSQKMAPVLRQ+YDQM PKWV++MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RGSPRQADLMIVAGRVSQKMAPVLRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEML+ AILKLH+KIQ LG+N E A EAEEAAL A PTIEM+
Sbjct 121 HIVPVDIYLPGCPPRPEMLMDAILKLHQKIQSSKLGVNAEEAAREAEEAALKALPTIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|297192787|ref|ZP_06910185.1| NADH dehydrogenase subunit B (NuoB) [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721026|gb|EDY64934.1| NADH dehydrogenase subunit B (NuoB) [Streptomyces pristinaespiralis
ATCC 25486]
Length=184
Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/184 (78%), Positives = 162/184 (89%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE+ AG+VRK+S++PATFGLACCAIEMM T R+D+ARFGME F
Sbjct 1 MGLEEKLPSGFLLTTVEQAAGWVRKSSVFPATFGLACCAIEMMTTGAGRYDLARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
+PRQADLMIVAGRVSQKMAPVLRQ+YDQM PKWV++MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RGSPRQADLMIVAGRVSQKMAPVLRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEML+ AILKLH+KIQ LG+N E A EAEEAAL A PTIEM+
Sbjct 121 HIVPVDIYLPGCPPRPEMLMDAILKLHQKIQGSKLGVNAEEAAREAEEAALKALPTIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|29831381|ref|NP_826015.1| NADH dehydrogenase subunit B [Streptomyces avermitilis MA-4680]
gi|81718124|sp|Q82DY0.1|NUOB1_STRAW RecName: Full=NADH-quinone oxidoreductase subunit B 1; AltName:
Full=NADH dehydrogenase I subunit B 1; AltName: Full=NDH-1
subunit B 1
gi|29608496|dbj|BAC72550.1| putative NADH dehydrogenase I chain B (complex I) [Streptomyces
avermitilis MA-4680]
Length=184
Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/184 (78%), Positives = 161/184 (88%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE+ AG+VRK S++PATFGLACCAIEMM T R+D+ARFGME F
Sbjct 1 MGLEEKLPSGFLLTTVEQAAGWVRKASVFPATFGLACCAIEMMTTGAGRYDLARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
+PRQADLMIVAGRVSQKMAPVLRQ+YDQM PKWV++MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RGSPRQADLMIVAGRVSQKMAPVLRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEML+ AILKLH+KIQ LG+N E A EAEEAAL A PTIEM+
Sbjct 121 HIVPVDIYLPGCPPRPEMLIDAILKLHQKIQSSKLGVNAEEAAREAEEAALKALPTIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
>gi|291298799|ref|YP_003510077.1| NADH-quinone oxidoreductase subunit B [Stackebrandtia nassauensis
DSM 44728]
gi|290568019|gb|ADD40984.1| NADH-quinone oxidoreductase, B subunit [Stackebrandtia nassauensis
DSM 44728]
Length=216
Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/168 (80%), Positives = 147/168 (88%), Gaps = 0/168 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP GILL++VEK+ + RK S WPATFGLACCAIEMMAT R+D ARFGME F
Sbjct 1 MGLEEKLPSGILLTSVEKLVNWTRKASFWPATFGLACCAIEMMATGAARYDTARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
A+PRQADLMIVAGRVSQKMAPVLRQIYDQM+EPKWVL+MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RASPRQADLMIVAGRVSQKMAPVLRQIYDQMSEPKWVLSMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEE 168
HVVPVDIYLPGCPPRPEMLL AILKLH+KI PLG R + + EAEE
Sbjct 121 HVVPVDIYLPGCPPRPEMLLDAILKLHDKILHEPLGEKRRQQLEEAEE 168
>gi|290958259|ref|YP_003489441.1| NADH dehydrogenase subunit NuoB [Streptomyces scabiei 87.22]
gi|260647785|emb|CBG70890.1| NuoB, NADH dehydrogenase subunit [Streptomyces scabiei 87.22]
Length=184
Score = 285 bits (730), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/184 (78%), Positives = 161/184 (88%), Gaps = 0/184 (0%)
Query 1 VGLEEQLPGGILLSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERF 60
+GLEE+LP G LL+TVE+ AG+VRK S++PATFGLACCAIEMM T R+D+ARFGME F
Sbjct 1 MGLEEKLPSGFLLTTVEQAAGWVRKASVFPATFGLACCAIEMMTTGAGRYDLARFGMEVF 60
Query 61 SATPRQADLMIVAGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGGMFNNYAIVQGVD 120
+PRQADLMIVAGRVSQKMAPVLRQ+YDQM PKWV++MGVCASSGGMFNNYAIVQGVD
Sbjct 61 RGSPRQADLMIVAGRVSQKMAPVLRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVD 120
Query 121 HVVPVDIYLPGCPPRPEMLLHAILKLHEKIQQMPLGINRERAIAEAEEAALLARPTIEMR 180
H+VPVDIYLPGCPPRPEML+ AILKLH+KIQ LG+N E A EAEEAAL A PTIEM+
Sbjct 121 HIVPVDIYLPGCPPRPEMLMDAILKLHQKIQTSKLGVNAEEAAREAEEAALKALPTIEMK 180
Query 181 GLLR 184
GLLR
Sbjct 181 GLLR 184
Lambda K H
0.324 0.138 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 170913802690
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40