BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3152
Length=410
Score E
Sequences producing significant alignments: (Bits) Value
gi|308376002|ref|ZP_07668164.1| NADH dehydrogenase subunit I H n... 813 0.0
gi|148824346|ref|YP_001289100.1| NADH dehydrogenase subunit H [M... 813 0.0
gi|15610288|ref|NP_217668.1| NADH dehydrogenase subunit H [Mycob... 812 0.0
gi|289763335|ref|ZP_06522713.1| NADH dehydrogenase I (chain H) n... 807 0.0
gi|118617953|ref|YP_906285.1| NADH dehydrogenase subunit H [Myco... 715 0.0
gi|240169663|ref|ZP_04748322.1| NADH dehydrogenase subunit H [My... 690 0.0
gi|254819279|ref|ZP_05224280.1| NADH dehydrogenase subunit H [My... 679 0.0
gi|342861060|ref|ZP_08717709.1| NADH:ubiquinone oxidoreductase s... 677 0.0
gi|296169183|ref|ZP_06850837.1| NADH-quinone oxidoreductase subu... 660 0.0
gi|336459339|gb|EGO38282.1| NADH:ubiquinone oxidoreductase subun... 654 0.0
gi|118467241|ref|YP_883192.1| NADH dehydrogenase subunit H [Myco... 651 0.0
gi|254776462|ref|ZP_05217978.1| NADH dehydrogenase subunit H [My... 645 0.0
gi|41409306|ref|NP_962142.1| NADH dehydrogenase subunit H [Mycob... 637 1e-180
gi|333991506|ref|YP_004524120.1| NADH dehydrogenase I (chain H) ... 572 3e-161
gi|118469595|ref|YP_886417.1| NADH dehydrogenase subunit H [Myco... 564 8e-159
gi|312139315|ref|YP_004006651.1| NADH dehydrogenase (quinone) ch... 563 2e-158
gi|108798543|ref|YP_638740.1| NADH dehydrogenase subunit H [Myco... 561 6e-158
gi|126434141|ref|YP_001069832.1| NADH dehydrogenase subunit H [M... 561 9e-158
gi|325676676|ref|ZP_08156351.1| NADH-quinone oxidoreductase subu... 560 2e-157
gi|315445436|ref|YP_004078315.1| NADH dehydrogenase subunit H [M... 557 1e-156
gi|145225067|ref|YP_001135745.1| NADH dehydrogenase subunit H [M... 556 2e-156
gi|226306207|ref|YP_002766167.1| NADH-quinone oxidoreductase cha... 556 2e-156
gi|229490807|ref|ZP_04384642.1| NADH-quinone oxidoreductase subu... 555 4e-156
gi|120402876|ref|YP_952705.1| NADH dehydrogenase subunit H [Myco... 546 2e-153
gi|111022879|ref|YP_705851.1| NADH dehydrogenase subunit H [Rhod... 543 2e-152
gi|226365387|ref|YP_002783170.1| NADH dehydrogenase subunit H [R... 543 2e-152
gi|326382756|ref|ZP_08204446.1| NADH:ubiquinone oxidoreductase s... 537 1e-150
gi|296140858|ref|YP_003648101.1| NADH dehydrogenase (quinone) [T... 529 3e-148
gi|262200414|ref|YP_003271622.1| NADH dehydrogenase [Gordonia br... 526 3e-147
gi|333922085|ref|YP_004495666.1| NADH-quinone oxidoreductase sub... 525 5e-147
gi|343926369|ref|ZP_08765874.1| NADH-quinone oxidoreductase chai... 521 1e-145
gi|169629227|ref|YP_001702876.1| NADH dehydrogenase subunit H [M... 513 3e-143
gi|289759282|ref|ZP_06518660.1| LOW QUALITY PROTEIN: NADH dehydr... 511 1e-142
gi|54024629|ref|YP_118871.1| NADH dehydrogenase subunit H [Nocar... 510 2e-142
gi|302543437|ref|ZP_07295779.1| NADH-quinone oxidoreductase, H s... 491 7e-137
gi|345008475|ref|YP_004810829.1| NAD(P)H-quinone oxidoreductase ... 491 8e-137
gi|319950458|ref|ZP_08024372.1| NADH:ubiquinone oxidoreductase s... 484 1e-134
gi|269128606|ref|YP_003301976.1| NADH dehydrogenase (quinone) [T... 478 6e-133
gi|311897897|dbj|BAJ30305.1| putative NADH-quinone oxidoreductas... 477 1e-132
gi|297159515|gb|ADI09227.1| NADH dehydrogenase subunit H [Strept... 476 2e-132
gi|302553433|ref|ZP_07305775.1| NADH-quinone oxidoreductase subu... 474 1e-131
gi|337767476|emb|CCB76187.1| NADH-quinone oxidoreductase subunit... 473 3e-131
gi|294630803|ref|ZP_06709363.1| NADH-quinone oxidoreductase, H s... 471 7e-131
gi|329935990|ref|ZP_08285790.1| NADH dehydrogenase subunit NuoH ... 471 1e-130
gi|182436770|ref|YP_001824489.1| NADH dehydrogenase subunit H [S... 470 2e-130
gi|289769827|ref|ZP_06529205.1| NuoH [Streptomyces lividans TK24... 469 3e-130
gi|21222952|ref|NP_628731.1| NADH dehydrogenase subunit H [Strep... 469 3e-130
gi|254391144|ref|ZP_05006351.1| NADH-quinone oxidoreductase subu... 468 9e-130
gi|290958253|ref|YP_003489435.1| NADH dehydrogenase subunit NuoH... 468 1e-129
gi|302521201|ref|ZP_07273543.1| NADH-quinone oxidoreductase H/I ... 465 5e-129
>gi|308376002|ref|ZP_07668164.1| NADH dehydrogenase subunit I H nuoH [Mycobacterium tuberculosis
SUMu007]
gi|308344471|gb|EFP33322.1| NADH dehydrogenase subunit I H nuoH [Mycobacterium tuberculosis
SUMu007]
Length=420
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/410 (100%), Positives = 410/410 (100%), Gaps = 0/410 (0%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA
Sbjct 11 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 70
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP
Sbjct 71 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 130
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT
Sbjct 131 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 190
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK
Sbjct 191 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 250
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY
Sbjct 251 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 310
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA
Sbjct 311 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 370
Query 361 AAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG 410
AAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG
Sbjct 371 AAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG 420
>gi|148824346|ref|YP_001289100.1| NADH dehydrogenase subunit H [Mycobacterium tuberculosis F11]
gi|254365777|ref|ZP_04981822.1| NADH dehydrogenase I (chain H) nuoH (NADH-ubiquinone oxidoreductase
chain H) [Mycobacterium tuberculosis str. Haarlem]
gi|289746961|ref|ZP_06506339.1| NADH dehydrogenase subunit I H nuoH [Mycobacterium tuberculosis
02_1987]
25 more sequence titles
Length=413
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/410 (100%), Positives = 410/410 (100%), Gaps = 0/410 (0%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA
Sbjct 4 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 63
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP
Sbjct 64 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 123
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT
Sbjct 124 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 183
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK
Sbjct 184 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 243
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY
Sbjct 244 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 303
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA
Sbjct 304 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 363
Query 361 AAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG 410
AAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG
Sbjct 364 AAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG 413
>gi|15610288|ref|NP_217668.1| NADH dehydrogenase subunit H [Mycobacterium tuberculosis H37Rv]
gi|15842728|ref|NP_337765.1| NADH dehydrogenase subunit H [Mycobacterium tuberculosis CDC1551]
gi|31794328|ref|NP_856821.1| NADH dehydrogenase subunit H [Mycobacterium bovis AF2122/97]
51 more sequence titles
Length=410
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/410 (100%), Positives = 410/410 (100%), Gaps = 0/410 (0%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA
Sbjct 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP
Sbjct 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT
Sbjct 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK
Sbjct 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY
Sbjct 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA
Sbjct 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
Query 361 AAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG 410
AAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG
Sbjct 361 AAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG 410
>gi|289763335|ref|ZP_06522713.1| NADH dehydrogenase I (chain H) nuoH (NADH-ubiquinone oxidoreductase
chain H) [Mycobacterium tuberculosis GM 1503]
gi|289710841|gb|EFD74857.1| NADH dehydrogenase I (chain H) nuoH (NADH-ubiquinone oxidoreductase
chain H) [Mycobacterium tuberculosis GM 1503]
Length=411
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/411 (99%), Positives = 410/411 (99%), Gaps = 1/411 (0%)
Query 1 MTTFG-HDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSL 59
MTTFG HDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSL
Sbjct 1 MTTFGRHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSL 60
Query 60 ADGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDL 119
ADGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDL
Sbjct 61 ADGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDL 120
Query 120 PVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAG 179
PVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAG
Sbjct 121 PVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAG 180
Query 180 TMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSL 239
TMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSL
Sbjct 181 TMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSL 240
Query 240 KFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFI 299
KFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFI
Sbjct 241 KFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFI 300
Query 300 YFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVV 359
YFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVV
Sbjct 301 YFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVV 360
Query 360 AAAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG 410
AAAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG
Sbjct 361 AAAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG 411
>gi|118617953|ref|YP_906285.1| NADH dehydrogenase subunit H [Mycobacterium ulcerans Agy99]
gi|183981491|ref|YP_001849782.1| NADH dehydrogenase I (chain H) NuoH (NADH- ubiquinone oxidoreductase
chain H) [Mycobacterium marinum M]
gi|156632679|sp|A0PR45.1|NUOH_MYCUA RecName: Full=NADH-quinone oxidoreductase subunit H; AltName:
Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit
H
gi|118570063|gb|ABL04814.1| NADH dehydrogenase I (chain H) NuoH (NADH- ubiquinone oxidoreductase
chain H) [Mycobacterium ulcerans Agy99]
gi|183174817|gb|ACC39927.1| NADH dehydrogenase I (chain H) NuoH (NADH- ubiquinone oxidoreductase
chain H) [Mycobacterium marinum M]
Length=424
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/424 (87%), Positives = 383/424 (91%), Gaps = 14/424 (3%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
MT FGHD WWLV AKAIA+FVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKG+LQSLA
Sbjct 1 MTDFGHDVWWLVVAKAIAIFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGSLQSLA 60
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP VSVFGHRTPLQ+TDLP
Sbjct 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPVVSVFGHRTPLQLTDLP 120
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFA VFL AG+
Sbjct 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFAAVFLYAGS 180
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTSQI+AAQD VWY FLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK
Sbjct 181 MSTSQIIAAQDRVWYIFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNMTTVSALAATLF GGWHAPWPLN+W AN GWWP++WFTAKVWGFLF+Y
Sbjct 241 FAMFMLAEYVNMTTVSALAATLFLGGWHAPWPLNLWHGANAGWWPVLWFTAKVWGFLFMY 300
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
FWLRATLPRLRYDQFMALGWKLLIPVSLVWV++AA+IR+LRNQGYQYWTP LV SSIVVA
Sbjct 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVLIAAVIRTLRNQGYQYWTPALVVSSIVVA 360
Query 361 AAMVLLLRKPLSAPGARASARQRG-------DEGTSPEPAFPTPPL----LA---GATKE 406
A +V+ LRKP S P A AR+RG DE + EP FPTPPL LA GA+KE
Sbjct 361 AILVMSLRKPFSTPNAVTKARRRGKQPAAGPDEQGALEPLFPTPPLPMKPLAQPVGASKE 420
Query 407 NAGG 410
NA G
Sbjct 421 NARG 424
>gi|240169663|ref|ZP_04748322.1| NADH dehydrogenase subunit H [Mycobacterium kansasii ATCC 12478]
Length=417
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/417 (86%), Positives = 378/417 (91%), Gaps = 7/417 (1%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
MT FGHDTWWLVAAKAIA+F FLMLTVLVAILAERKLLGRMQLRPGPNRVGP GALQSLA
Sbjct 1 MTPFGHDTWWLVAAKAIAIFAFLMLTVLVAILAERKLLGRMQLRPGPNRVGPHGALQSLA 60
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKESITPGGID+FVYF+APIISVIPAFTAFAF+PFGPEVSVFGHRTPLQ+TDLP
Sbjct 61 DGIKLALKESITPGGIDKFVYFLAPIISVIPAFTAFAFVPFGPEVSVFGHRTPLQLTDLP 120
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVLFIL +SA+GVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFL AGT
Sbjct 121 VAVLFILAMSAVGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLYAGT 180
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTSQI+AAQD VWY FLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK
Sbjct 181 MSTSQIIAAQDRVWYVFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNMTTVSALAAT+F GGWHAPWPLNMWA ANTGWWPL+WFTAKVWGFLFIY
Sbjct 241 FAMFMLAEYVNMTTVSALAATMFLGGWHAPWPLNMWAGANTGWWPLLWFTAKVWGFLFIY 300
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
FWLRATLPRLRYDQFMALGWKLLIPVSL+W+M+AA+IR+LRNQGYQYWT TLV SS+VV
Sbjct 301 FWLRATLPRLRYDQFMALGWKLLIPVSLLWIMIAAVIRALRNQGYQYWTATLVVSSLVVT 360
Query 361 AAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPL----LA---GATKENAGG 410
+V+ LR P S R +R E + EP FPTPPL LA GA+KENA G
Sbjct 361 TGLVMSLRSPGSRVKRRQQRAERTAERGAAEPVFPTPPLPMKPLAQPVGASKENARG 417
>gi|254819279|ref|ZP_05224280.1| NADH dehydrogenase subunit H [Mycobacterium intracellulare ATCC
13950]
Length=423
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/423 (81%), Positives = 365/423 (87%), Gaps = 13/423 (3%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
MT FGHDTWWLV KA+A+FVFLML VLVAIL ERK+LG MQ RPGPNR GP G LQSLA
Sbjct 1 MTVFGHDTWWLVLGKALAIFVFLMLNVLVAILLERKILGWMQRRPGPNRAGPWGVLQSLA 60
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKE+ITPGG+D+FVYF AP+IS IPAFTAFAFIPFGP VSVFGHRTPLQ+TDLP
Sbjct 61 DGIKLALKETITPGGVDKFVYFAAPVISTIPAFTAFAFIPFGPVVSVFGHRTPLQLTDLP 120
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFA VFL AG+
Sbjct 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFAAVFLYAGS 180
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTSQIVAAQD VWY FLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK
Sbjct 181 MSTSQIVAAQDRVWYVFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNM TVS+LA LFFGGWHAPWPLNMWA ANTGWWP++WFTAK+W FLFIY
Sbjct 241 FAMFMLAEYVNMMTVSSLATALFFGGWHAPWPLNMWAGANTGWWPVLWFTAKMWTFLFIY 300
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
FWLRA+LPRLRYDQFM LGWKLLIP SLVWV++AA++R+LRNQGYQ+WTP LV SSIV A
Sbjct 301 FWLRASLPRLRYDQFMGLGWKLLIPASLVWVLIAAVVRTLRNQGYQHWTPVLVVSSIVFA 360
Query 361 AAMVLLLRKPLSAPGARASARQRGDEGTS------PEPAFPTPPL-------LAGATKEN 407
+V+LLRKP SAPG RA RQ + P FPTPPL LA A+KE
Sbjct 361 TVLVMLLRKPFSAPGIRALERQLRRQAKKLPAASISTPVFPTPPLPAKEMKSLAAASKEE 420
Query 408 AGG 410
A G
Sbjct 421 ARG 423
>gi|342861060|ref|ZP_08717709.1| NADH:ubiquinone oxidoreductase subunit H [Mycobacterium colombiense
CECT 3035]
gi|342131504|gb|EGT84774.1| NADH:ubiquinone oxidoreductase subunit H [Mycobacterium colombiense
CECT 3035]
Length=423
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/423 (81%), Positives = 365/423 (87%), Gaps = 13/423 (3%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
MT FGHDTWWLV KA+A+FVFLML VLVAIL ERK+LG MQ RPGPNR GP G LQSLA
Sbjct 1 MTVFGHDTWWLVLGKALAIFVFLMLNVLVAILLERKILGWMQRRPGPNRAGPWGVLQSLA 60
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKE+ITPGG+D+FVYF AP+IS IPAFTAFAFIPFGP VSVFGHRTPLQ+TDLP
Sbjct 61 DGIKLALKETITPGGVDKFVYFAAPVISTIPAFTAFAFIPFGPVVSVFGHRTPLQLTDLP 120
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFA VFL AGT
Sbjct 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFAAVFLYAGT 180
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTSQIVAAQD VWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK
Sbjct 181 MSTSQIVAAQDRVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNM TVS+LA LFFGGWHAPWPLNMWA ANTGWWP++WFTAK+W FLF+Y
Sbjct 241 FAMFMLAEYVNMMTVSSLATVLFFGGWHAPWPLNMWAGANTGWWPVLWFTAKMWTFLFVY 300
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
FWLRA+LPRLRYDQFM LGWKLLIP SLVWV++AA+IR+L+NQGY +WTP LV SS V A
Sbjct 301 FWLRASLPRLRYDQFMGLGWKLLIPASLVWVLIAAVIRTLQNQGYAHWTPILVVSSAVFA 360
Query 361 AAMVLLLRKPLSAPGARASARQRGDEGT------SPEPAFPTPPL-------LAGATKEN 407
A+VLLLRKP SAPG RA +Q E P FPTPPL LA A+KE
Sbjct 361 TALVLLLRKPFSAPGIRALEKQLRREAKKLPTALDSTPVFPTPPLPSTAQKSLAAASKEK 420
Query 408 AGG 410
A G
Sbjct 421 ARG 423
>gi|296169183|ref|ZP_06850837.1| NADH-quinone oxidoreductase subunit H [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896162|gb|EFG75828.1| NADH-quinone oxidoreductase subunit H [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=423
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/382 (85%), Positives = 350/382 (92%), Gaps = 0/382 (0%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
+T FGHDTWWLV KA+A+FVFLML VLVAIL ERK+LG MQLRPGPNR GP G LQSLA
Sbjct 4 LTAFGHDTWWLVLGKALAIFVFLMLNVLVAILLERKILGWMQLRPGPNRAGPWGTLQSLA 63
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKE+ITPGG+D+FVYF AP+IS IPAFTAFAFIPFGP VSVFGHRTPLQ+TDLP
Sbjct 64 DGIKLALKETITPGGVDKFVYFAAPVISTIPAFTAFAFIPFGPVVSVFGHRTPLQLTDLP 123
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFA VFL AG+
Sbjct 124 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFAAVFLYAGS 183
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTSQIVAAQD VWY FLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK
Sbjct 184 MSTSQIVAAQDRVWYVFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 243
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNM TVS+LA LFFGGWHAPWP+NMWA ANTGWWP++WFTAK+W FLFIY
Sbjct 244 FAMFMLAEYVNMMTVSSLATALFFGGWHAPWPINMWAGANTGWWPVLWFTAKMWTFLFIY 303
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
FWLRA+LPRLRYDQFM LGWKLLIP SLVWV++AA+IR+L+NQGY +WTP LV SS+V A
Sbjct 304 FWLRASLPRLRYDQFMGLGWKLLIPASLVWVLIAAVIRTLQNQGYAHWTPILVVSSVVFA 363
Query 361 AAMVLLLRKPLSAPGARASARQ 382
A+VLLLRKP +APG RA +Q
Sbjct 364 TALVLLLRKPFAAPGIRALEKQ 385
>gi|336459339|gb|EGO38282.1| NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Mycobacterium
avium subsp. paratuberculosis S397]
Length=424
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/402 (82%), Positives = 357/402 (89%), Gaps = 6/402 (1%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
+T FGHD WWLV KA+A+FVFLML VLVAIL ERK+LG MQLRPGPNRVGP G LQSLA
Sbjct 5 LTAFGHDPWWLVLGKALAIFVFLMLNVLVAILLERKILGWMQLRPGPNRVGPWGVLQSLA 64
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKE+ITPGG+D+FVYF AP+IS IPAFTAFAFIPFGP VSVFGHRTPLQ+TDLP
Sbjct 65 DGIKLALKETITPGGVDKFVYFAAPVISTIPAFTAFAFIPFGPVVSVFGHRTPLQLTDLP 124
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFA VFL AG+
Sbjct 125 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFAAVFLYAGS 184
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTSQIVAAQD VW+ FLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK
Sbjct 185 MSTSQIVAAQDRVWFVFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 244
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNM TVS+LA LFFGGWHAPWPLNMWA ANTGWWP++WFTAK+W FLFIY
Sbjct 245 FAMFMLAEYVNMMTVSSLATALFFGGWHAPWPLNMWAGANTGWWPVLWFTAKMWTFLFIY 304
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
FWLRA+LPRLRYDQFM LGWKLLIP SLVWV++AA+IR+L++QGY +WTP LV SSIV A
Sbjct 305 FWLRASLPRLRYDQFMGLGWKLLIPASLVWVLIAAVIRTLQHQGYAHWTPILVISSIVFA 364
Query 361 AAMVLLLRKPLSAPGARASARQRGDEG----TSPE--PAFPT 396
AA+VL LRKP + P RA RQ + T+P+ P FPT
Sbjct 365 AALVLSLRKPFTTPHIRALRRQLRRKAKQLPTAPDSTPVFPT 406
>gi|118467241|ref|YP_883192.1| NADH dehydrogenase subunit H [Mycobacterium avium 104]
gi|156632676|sp|A0QJV4.1|NUOH_MYCA1 RecName: Full=NADH-quinone oxidoreductase subunit H; AltName:
Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit
H
gi|118168528|gb|ABK69425.1| NADH-quinone oxidoreductase chain h [Mycobacterium avium 104]
Length=418
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/381 (85%), Positives = 347/381 (92%), Gaps = 0/381 (0%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
+T FGHD WWLV KA+A+FVFLML VLVAIL ERK+LG MQLRPGPNRVGP G LQSLA
Sbjct 5 LTAFGHDPWWLVLGKALAIFVFLMLNVLVAILLERKILGWMQLRPGPNRVGPWGVLQSLA 64
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKE+ITPGG+D+FVYF AP+IS IPAFTAFAFIPFGP VSVFGHRTPLQ+TDLP
Sbjct 65 DGIKLALKETITPGGVDKFVYFAAPVISTIPAFTAFAFIPFGPVVSVFGHRTPLQLTDLP 124
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFA VFL AG+
Sbjct 125 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFAAVFLYAGS 184
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTSQIVAAQD VW+ FLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK
Sbjct 185 MSTSQIVAAQDRVWFVFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 244
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNM TVS+LA LFFGGWHAPWPLNMWA ANTGWWP++WFTAK+W FLFIY
Sbjct 245 FAMFMLAEYVNMMTVSSLATALFFGGWHAPWPLNMWAGANTGWWPVLWFTAKMWTFLFIY 304
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
FWLRA+LPRLRYDQFM LGWKLLIP SLVWV++AA+IR+L+NQGY +WTP LV SSIV A
Sbjct 305 FWLRASLPRLRYDQFMGLGWKLLIPASLVWVLIAAVIRTLQNQGYAHWTPILVISSIVFA 364
Query 361 AAMVLLLRKPLSAPGARASAR 381
AA+VL LRKP + P RA R
Sbjct 365 AALVLSLRKPFTTPHIRALRR 385
>gi|254776462|ref|ZP_05217978.1| NADH dehydrogenase subunit H [Mycobacterium avium subsp. avium
ATCC 25291]
Length=424
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/374 (86%), Positives = 343/374 (92%), Gaps = 0/374 (0%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
+T FGHD WWLV KA+A+FVFLML VLVAIL ERK+LG MQLRPGPNRVGP G LQSLA
Sbjct 5 LTAFGHDPWWLVLGKALAIFVFLMLNVLVAILLERKILGWMQLRPGPNRVGPWGVLQSLA 64
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKE+ITPGG+D+FVYF AP+IS IPAFTAFAFIPFGP VSVFGHRTPLQ+TDLP
Sbjct 65 DGIKLALKETITPGGVDKFVYFAAPVISTIPAFTAFAFIPFGPVVSVFGHRTPLQLTDLP 124
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFA VFL AG+
Sbjct 125 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFAAVFLYAGS 184
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTSQIVAAQD VW+ FLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK
Sbjct 185 MSTSQIVAAQDRVWFVFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 244
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNM TVS+LA LFFGGWHAPWPLN WA ANTGWWP++WFTAK+W FLFIY
Sbjct 245 FAMFMLAEYVNMMTVSSLATALFFGGWHAPWPLNTWAGANTGWWPVLWFTAKMWTFLFIY 304
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
FWLRA+LPRLRYDQFM LGWKLLIP SLVWV++AA+IR+L+NQGY +WTP LV SSIV A
Sbjct 305 FWLRASLPRLRYDQFMGLGWKLLIPASLVWVLIAAVIRTLQNQGYAHWTPILVISSIVFA 364
Query 361 AAMVLLLRKPLSAP 374
AA+VL LRKP + P
Sbjct 365 AALVLSLRKPFTTP 378
>gi|41409306|ref|NP_962142.1| NADH dehydrogenase subunit H [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|81413369|sp|Q73V08.1|NUOH_MYCPA RecName: Full=NADH-quinone oxidoreductase subunit H; AltName:
Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit
H
gi|41398126|gb|AAS05756.1| NuoH [Mycobacterium avium subsp. paratuberculosis K-10]
Length=409
Score = 637 bits (1643), Expect = 1e-180, Method: Compositional matrix adjust.
Identities = 321/388 (83%), Positives = 347/388 (90%), Gaps = 6/388 (1%)
Query 15 KAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLADGIKLALKESITPG 74
KA+A+FVFLML VLVAIL ERK+LG MQLRPGPNRVGP G LQSLADGIKLALKE+ITPG
Sbjct 4 KALAIFVFLMLNVLVAILLERKILGWMQLRPGPNRVGPWGVLQSLADGIKLALKETITPG 63
Query 75 GIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLPVAVLFILGLSAIGV 134
G+D+FVYF AP+IS IPAFTAFAFIPFGP VSVFGHRTPLQ+TDLPVAVLFILGLSAIGV
Sbjct 64 GVDKFVYFAAPVISTIPAFTAFAFIPFGPVVSVFGHRTPLQLTDLPVAVLFILGLSAIGV 123
Query 135 YGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGTMSTSQIVAAQDGVW 194
YGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFA VFL AG+MSTSQIVAAQD VW
Sbjct 124 YGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFAAVFLYAGSMSTSQIVAAQDRVW 183
Query 195 YAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKFAMFMLAEYVNMTT 254
+ FLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKFAMFMLAEYVNM T
Sbjct 184 FVFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKFAMFMLAEYVNMMT 243
Query 255 VSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYFWLRATLPRLRYDQ 314
VS+LA LFFGGWHAPWPLNMWA ANTGWWP++WFTAK+W FLFIYFWLRA+LPRLRYDQ
Sbjct 244 VSSLATALFFGGWHAPWPLNMWAGANTGWWPVLWFTAKMWTFLFIYFWLRASLPRLRYDQ 303
Query 315 FMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVAAAMVLLLRKPLSAP 374
FM LGWKLLIP SLVWV++AA+IR+L+NQGY +WTP LV SSIV AAA+VL LRKP + P
Sbjct 304 FMGLGWKLLIPASLVWVLIAAVIRTLQNQGYAHWTPILVISSIVFAAALVLSLRKPFTTP 363
Query 375 GARASARQRGDEG----TSPE--PAFPT 396
RA RQ + T+P+ P FPT
Sbjct 364 HIRALRRQLRRKAKQLPTAPDSTPVFPT 391
>gi|333991506|ref|YP_004524120.1| NADH dehydrogenase I (chain H) NuoH (NADH- ubiquinone oxidoreductase
chain H) [Mycobacterium sp. JDM601]
gi|333487474|gb|AEF36866.1| NADH dehydrogenase I (chain H) NuoH (NADH- ubiquinone oxidoreductase
chain H) [Mycobacterium sp. JDM601]
Length=408
Score = 572 bits (1475), Expect = 3e-161, Method: Compositional matrix adjust.
Identities = 284/406 (70%), Positives = 334/406 (83%), Gaps = 6/406 (1%)
Query 9 WWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLADGIKLALK 68
WWLV AK +AVF FL+LTVL AI+ ERK+L RMQ+RPGPNRVGPKG LQSLADGIKLALK
Sbjct 5 WWLVLAKVLAVFAFLVLTVLFAIVIERKVLARMQMRPGPNRVGPKGWLQSLADGIKLALK 64
Query 69 ESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLPVAVLFILG 128
E I P G+DR +Y +AP+IS +PA TAFA IPFGPEVS+ GHRT LQ+ DLP+AVLFIL
Sbjct 65 EDIVPAGVDRAIYVMAPVISTVPAITAFAVIPFGPEVSILGHRTDLQLADLPIAVLFILA 124
Query 129 LSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGTMSTSQIVA 188
+S+IGVYGI+L GW+SGS YPLLGG+RSTAQVISYEVAMGLSFA+VFL AGTMSTS IVA
Sbjct 125 MSSIGVYGIILAGWSSGSPYPLLGGIRSTAQVISYEVAMGLSFASVFLYAGTMSTSSIVA 184
Query 189 AQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKFAMFMLAE 248
AQD +W+AFLLLPSF++YL +MVGETNRAPFDLPEAEGELV GFHTEYSSLKFA+F LAE
Sbjct 185 AQDRIWFAFLLLPSFMVYLTAMVGETNRAPFDLPEAEGELVGGFHTEYSSLKFALFFLAE 244
Query 249 YVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYFWLRATLP 308
Y+N+TTVSALA TLFFGGWHAP+PLN+WA AN GWWPL+WFTAKVWGF+F+Y WLRATLP
Sbjct 245 YINITTVSALAVTLFFGGWHAPFPLNLWAGANQGWWPLLWFTAKVWGFIFMYIWLRATLP 304
Query 309 RLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVAAAMVLLLR 368
RLRYDQFMALGWK+LIPV+L+WV++AA++RSL N+GYQ+W L+ S + ++ +L
Sbjct 305 RLRYDQFMALGWKILIPVALLWVLLAAVMRSLGNEGYQHWEAVLIAISTLTTLLVLAVLH 364
Query 369 KPLSA----PGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG 410
+ SA P AS EG+ P P P P + KE+ G
Sbjct 365 RRFSAVNTVPDEPASEPVVASEGSFPTP--PLPQRNSPRVKEDVNG 408
>gi|118469595|ref|YP_886417.1| NADH dehydrogenase subunit H [Mycobacterium smegmatis str. MC2
155]
gi|156632678|sp|A0QU29.1|NUOH_MYCS2 RecName: Full=NADH-quinone oxidoreductase subunit H; AltName:
Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit
H
gi|118170882|gb|ABK71778.1| NADH-quinone oxidoreductase, H subunit [Mycobacterium smegmatis
str. MC2 155]
Length=408
Score = 564 bits (1454), Expect = 8e-159, Method: Compositional matrix adjust.
Identities = 288/409 (71%), Positives = 333/409 (82%), Gaps = 11/409 (2%)
Query 2 TTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLAD 61
T FGHD WWL+ AKA+A+FVFL+LTVL AIL ERKLLGRMQ+R GPNRVGP G LQSLAD
Sbjct 7 TLFGHDPWWLMLAKAVAIFVFLLLTVLSAILIERKLLGRMQMRFGPNRVGPAGLLQSLAD 66
Query 62 GIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLPV 121
GIKLALKE + P G+D+ +Y +AP+ISVIPAF AF+ IP G VSVFGHRTPLQ+TDLPV
Sbjct 67 GIKLALKEGLVPAGVDKPIYLLAPVISVIPAFVAFSVIPLGGAVSVFGHRTPLQLTDLPV 126
Query 122 AVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGTM 181
AVLFIL ++IGVYGIVL GWASGSTYPLLGG+RS+AQV+SYE+AMGLSF VFL AGTM
Sbjct 127 AVLFILAATSIGVYGIVLAGWASGSTYPLLGGLRSSAQVVSYEIAMGLSFVAVFLYAGTM 186
Query 182 STSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKF 241
STS IVAAQD W+ FLLLPSF++Y++SMVGETNRAPFDLPEAEGELV GFHTEYSSLKF
Sbjct 187 STSGIVAAQDRTWFVFLLLPSFLVYVVSMVGETNRAPFDLPEAEGELVGGFHTEYSSLKF 246
Query 242 AMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYF 301
AMFMLAEYVNMTTVSALA T+F GGWHAP+P N+ AN+GWWPL+WFTAKVW F+F+YF
Sbjct 247 AMFMLAEYVNMTTVSALATTMFLGGWHAPFPFNLIDGANSGWWPLLWFTAKVWTFMFLYF 306
Query 302 WLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVAA 361
WLRATLPRLRYDQFMALGWK+LIPVSL+W+MV AI RSLR G W L+ +++VV
Sbjct 307 WLRATLPRLRYDQFMALGWKVLIPVSLLWIMVVAITRSLRQHGEGTWAAWLLTAAVVVVV 366
Query 362 AMVLLLRKPLSAPGARASARQRGDEGTSPEP--AFPTPPLLAGATKENA 408
A++ G S R+R + P+ A+P PPL + TKE A
Sbjct 367 ALIW---------GLATSLRRRTVQPPPPQSTGAYPVPPLPSVGTKETA 406
>gi|312139315|ref|YP_004006651.1| NADH dehydrogenase (quinone) chain h nuoh [Rhodococcus equi 103S]
gi|311888654|emb|CBH47966.1| NADH dehydrogenase (quinone) chain H NuoH [Rhodococcus equi 103S]
Length=434
Score = 563 bits (1452), Expect = 2e-158, Method: Compositional matrix adjust.
Identities = 283/403 (71%), Positives = 331/403 (83%), Gaps = 5/403 (1%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FGHD WWLV AKA+ +FVFL+LTVL+AI ERK+L MQ+R GP+RVGP G LQSLA
Sbjct 9 LSMFGHDPWWLVVAKALGIFVFLVLTVLLAIYLERKVLAWMQMRVGPDRVGPHGILQSLA 68
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DG+KLALKE I P G+D+ VY APII+V+PAF AFA +PFGPEVS+ GHRTPLQ+TDLP
Sbjct 69 DGVKLALKEGIVPAGVDKPVYLTAPIIAVVPAFMAFAVVPFGPEVSILGHRTPLQLTDLP 128
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVL+IL ++++GVYGIVL GWASGSTYPLLGG+RSTAQVISYEVAMGL+FA VFL AGT
Sbjct 129 VAVLYILAVTSVGVYGIVLAGWASGSTYPLLGGLRSTAQVISYEVAMGLTFAAVFLDAGT 188
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTS IVAAQ+G WY FLLLP+F++Y+ SMVGETNRAPFDLPEAEGELV GFHTEYSSL+
Sbjct 189 MSTSGIVAAQEGHWYVFLLLPAFLVYVTSMVGETNRAPFDLPEAEGELVGGFHTEYSSLR 248
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNM TVSALAAT+F GGWHAPWPLNMW AN+GWWPL+WFT KVWGFLF++
Sbjct 249 FAMFMLAEYVNMVTVSALAATMFLGGWHAPWPLNMWDGANSGWWPLLWFTIKVWGFLFVF 308
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQ-YWTPTLVFSSIVV 359
WLRATLPRLRYDQFM LGWK+LIPV+L WVMV A +R+LRN+GY+ W +V ++V
Sbjct 309 MWLRATLPRLRYDQFMNLGWKVLIPVALAWVMVVATVRALRNEGYESRWIVLVVGGAVVA 368
Query 360 AAAMVLLLRKPLSAPGARASARQRGDEGTSPEPA---FPTPPL 399
+ L R+ L A A D GT +P+ FP PPL
Sbjct 369 LGLLAGLYRR-LRATRAGDDGAAPHDTGTPFDPSAGGFPVPPL 410
>gi|108798543|ref|YP_638740.1| NADH dehydrogenase subunit H [Mycobacterium sp. MCS]
gi|119867643|ref|YP_937595.1| NADH dehydrogenase subunit H [Mycobacterium sp. KMS]
gi|123070437|sp|Q1BBQ0.1|NUOH_MYCSS RecName: Full=NADH-quinone oxidoreductase subunit H; AltName:
Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit
H
gi|158513061|sp|A1UD97.1|NUOH_MYCSK RecName: Full=NADH-quinone oxidoreductase subunit H; AltName:
Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit
H
gi|108768962|gb|ABG07684.1| NADH dehydrogenase subunit H [Mycobacterium sp. MCS]
gi|119693732|gb|ABL90805.1| NADH dehydrogenase subunit H [Mycobacterium sp. KMS]
Length=416
Score = 561 bits (1447), Expect = 6e-158, Method: Compositional matrix adjust.
Identities = 279/399 (70%), Positives = 322/399 (81%), Gaps = 8/399 (2%)
Query 2 TTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLAD 61
T FGHD WWL+ AKA+ VFVFL+LTVL AIL ERK+LGRMQ+R GPNRVGPKG LQSLAD
Sbjct 7 TLFGHDPWWLILAKAVGVFVFLVLTVLAAILIERKVLGRMQMRFGPNRVGPKGLLQSLAD 66
Query 62 GIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLPV 121
GIKLALKE ITP G+D+ VY +AP+ISVIPAF AFA IP G EVSVFGHRT LQ+TDL V
Sbjct 67 GIKLALKEGITPAGVDKPVYLLAPVISVIPAFLAFAVIPMGGEVSVFGHRTALQLTDLAV 126
Query 122 AVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGTM 181
AVL+IL ++++GVYGIVL GWASGSTYPLLGG+RS+AQV+SYE+AM LSFATVFL AGTM
Sbjct 127 AVLYILAVTSVGVYGIVLAGWASGSTYPLLGGLRSSAQVVSYEIAMALSFATVFLYAGTM 186
Query 182 STSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKF 241
STS IVAAQ WY FLLLPSF++Y+ SMVGETNRAPFDLPEAEGELV GFHTEYSSLKF
Sbjct 187 STSGIVAAQTSTWYVFLLLPSFLVYVTSMVGETNRAPFDLPEAEGELVGGFHTEYSSLKF 246
Query 242 AMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYF 301
AMFMLAEYVNMTTVSALA T+F GGWHAPWP+++W AN+GWWPL+WFTAKVW FLF+Y
Sbjct 247 AMFMLAEYVNMTTVSALATTMFLGGWHAPWPISLWEGANSGWWPLLWFTAKVWVFLFVYI 306
Query 302 WLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVAA 361
WLR TLPRLRYDQFMA+GWK+LIPVSL W+M+ A SLR G+ W L+ + V+
Sbjct 307 WLRGTLPRLRYDQFMAIGWKMLIPVSLAWIMIVATAHSLRTTGHGGWASGLLIAGTVLTF 366
Query 362 AMVLLLRKPLSAPGARA-SARQRGDEGTSPEPAFPTPPL 399
+ ++L + + R AR D FP PP+
Sbjct 367 GLAVILWRTMRFRADRTVPARTAAD-------VFPIPPI 398
>gi|126434141|ref|YP_001069832.1| NADH dehydrogenase subunit H [Mycobacterium sp. JLS]
gi|158513452|sp|A3PWR4.1|NUOH_MYCSJ RecName: Full=NADH-quinone oxidoreductase subunit H; AltName:
Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit
H
gi|126233941|gb|ABN97341.1| NADH dehydrogenase subunit H [Mycobacterium sp. JLS]
Length=416
Score = 561 bits (1445), Expect = 9e-158, Method: Compositional matrix adjust.
Identities = 282/407 (70%), Positives = 326/407 (81%), Gaps = 10/407 (2%)
Query 2 TTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLAD 61
T FGHD WWL+ AKA+ VFVFL+LTVL AIL ERK+LGRMQ+R GPNRVGPKG LQSLAD
Sbjct 7 TLFGHDPWWLILAKAVGVFVFLVLTVLAAILIERKVLGRMQMRFGPNRVGPKGLLQSLAD 66
Query 62 GIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLPV 121
GIKLALKE ITP G+D+ VY +AP+ISVIPAF AFA IP G EVSVFGHRT LQ+TDL V
Sbjct 67 GIKLALKEGITPAGVDKPVYLLAPVISVIPAFLAFAVIPMGGEVSVFGHRTALQLTDLAV 126
Query 122 AVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGTM 181
AVL+IL ++++GVYGIVL GWASGSTYPLLGG+RS+AQV+SYE+AM LSFATVFL AGTM
Sbjct 127 AVLYILAVTSVGVYGIVLAGWASGSTYPLLGGLRSSAQVVSYEIAMALSFATVFLYAGTM 186
Query 182 STSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKF 241
STS IVAAQ WY FLLLPSF++Y+ SMVGETNRAPFDLPEAEGELV GFHTEYSSLKF
Sbjct 187 STSGIVAAQTSTWYVFLLLPSFLVYVTSMVGETNRAPFDLPEAEGELVGGFHTEYSSLKF 246
Query 242 AMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYF 301
AMFMLAEYVNMTTVSALA T+F GGWHAPWP+++W AN+GWWPL+WFTAKVW FLF+Y
Sbjct 247 AMFMLAEYVNMTTVSALATTMFLGGWHAPWPISLWEGANSGWWPLLWFTAKVWVFLFVYI 306
Query 302 WLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVAA 361
WLR TLPRLRYDQFMA+GWK+LIPVSL W+M+ A SLR G+ W L+ + V+
Sbjct 307 WLRGTLPRLRYDQFMAIGWKMLIPVSLAWIMIVATAHSLRTTGHGGWASGLLIAGTVLTF 366
Query 362 AMVLLLRKPLSAPGARA-SARQRGDEGTSPEPAFPTPPL--LAGATK 405
+ ++L + + R AR D FP PP+ AGA +
Sbjct 367 GLAVVLWRTMRFRADRTVPARTAAD-------VFPIPPIPGRAGAAR 406
>gi|325676676|ref|ZP_08156351.1| NADH-quinone oxidoreductase subunit H [Rhodococcus equi ATCC
33707]
gi|325552531|gb|EGD22218.1| NADH-quinone oxidoreductase subunit H [Rhodococcus equi ATCC
33707]
Length=434
Score = 560 bits (1442), Expect = 2e-157, Method: Compositional matrix adjust.
Identities = 280/410 (69%), Positives = 330/410 (81%), Gaps = 19/410 (4%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FGHD WWLV AKA+ +FVFL+LTVL+AI ERK+L MQ+R GP+R+GP G LQSLA
Sbjct 9 LSMFGHDPWWLVVAKALGIFVFLVLTVLLAIYLERKVLAWMQMRVGPDRIGPHGILQSLA 68
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DG+KLALKE I P G+D+ VY APII+V+PAF AFA +PFGPEVS+ GHRTPLQ+TDLP
Sbjct 69 DGVKLALKEGIVPAGVDKPVYLTAPIIAVVPAFMAFAVVPFGPEVSILGHRTPLQLTDLP 128
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVL+IL ++++GVYGIVL GWASGSTYPLLGG+RSTAQVISYEVAMGL+FA VFL AGT
Sbjct 129 VAVLYILAVTSVGVYGIVLAGWASGSTYPLLGGLRSTAQVISYEVAMGLTFAAVFLDAGT 188
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTS IVAAQ+G WY FLLLP+F++Y+ SMVGETNRAPFDLPEAEGELV GFHTEYSSL+
Sbjct 189 MSTSGIVAAQEGHWYVFLLLPAFLVYVTSMVGETNRAPFDLPEAEGELVGGFHTEYSSLR 248
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNM TVSALAAT+F GGWHAPWPLNMW A++GWWPL+WFT KVWGFLF++
Sbjct 249 FAMFMLAEYVNMVTVSALAATMFLGGWHAPWPLNMWDGADSGWWPLLWFTIKVWGFLFVF 308
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQ-YWTPTLVFSSIVV 359
WLRATLPRLRYDQFM LGWK+LIPV+L WVMV A +R+LRN+GY+ W +V ++V
Sbjct 309 MWLRATLPRLRYDQFMNLGWKVLIPVALAWVMVVATVRALRNEGYESRWIVLVVGGAVVA 368
Query 360 AAAMVLLLRKPLSAPGARASARQRGDEGTSPEP----------AFPTPPL 399
+ L R R A + GD+G +P FP PPL
Sbjct 369 LGLLAGLYR--------RFRATRAGDDGAAPHDTGTPFDPSAGGFPVPPL 410
>gi|315445436|ref|YP_004078315.1| NADH dehydrogenase subunit H [Mycobacterium sp. Spyr1]
gi|315263739|gb|ADU00481.1| NADH dehydrogenase subunit H [Mycobacterium sp. Spyr1]
Length=410
Score = 557 bits (1435), Expect = 1e-156, Method: Compositional matrix adjust.
Identities = 277/401 (70%), Positives = 321/401 (81%), Gaps = 8/401 (1%)
Query 2 TTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLAD 61
T FGHD WWL+ AK++ VFVFL+LTVL AIL ERK+LGRMQLR GPNRVGP+G LQSLAD
Sbjct 7 TLFGHDPWWLILAKSLGVFVFLLLTVLAAILIERKILGRMQLRLGPNRVGPRGLLQSLAD 66
Query 62 GIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLPV 121
GIKLALKE + P G+D+++Y AP+ISVIPAF AFA IP GPEVSVFGHRT LQ+TDLPV
Sbjct 67 GIKLALKEGLVPAGVDKWIYLAAPVISVIPAFMAFAVIPLGPEVSVFGHRTALQLTDLPV 126
Query 122 AVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGTM 181
AVL+IL +++IGVYGIVL GWASGS YPLLGG+RS+AQVISYE+AM LSF VF+ AGTM
Sbjct 127 AVLYILAVTSIGVYGIVLAGWASGSVYPLLGGLRSSAQVISYEIAMALSFVAVFIYAGTM 186
Query 182 STSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKF 241
STS IVAAQ+ VW+ FLLLPSF++YL SMVGETNRAPFDLPEAEGELV GFHTEYSSLKF
Sbjct 187 STSGIVAAQNDVWFIFLLLPSFLVYLTSMVGETNRAPFDLPEAEGELVGGFHTEYSSLKF 246
Query 242 AMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYF 301
AMFMLAEYVNMTTVSALA TLF GGWHAPWP+++ AN+GWWPL+WFTAKVW FLF +
Sbjct 247 AMFMLAEYVNMTTVSALATTLFLGGWHAPWPISIADGANSGWWPLLWFTAKVWLFLFFFM 306
Query 302 WLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSS---IV 358
WLRATLPR+RYDQFM LGWKLLIPVSL W+ + A R+++NQGYQ W L+ + +
Sbjct 307 WLRATLPRMRYDQFMGLGWKLLIPVSLAWIAIVATTRAMQNQGYQGWVTALIGVTGVAAI 366
Query 359 VAAAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPL 399
+A+ + + Q D G AFP PPL
Sbjct 367 LASLLAWRALRARRRRTPHGPPAQSSDHG-----AFPVPPL 402
>gi|145225067|ref|YP_001135745.1| NADH dehydrogenase subunit H [Mycobacterium gilvum PYR-GCK]
gi|189030916|sp|A4TDB2.1|NUOH_MYCGI RecName: Full=NADH-quinone oxidoreductase subunit H; AltName:
Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit
H
gi|145217553|gb|ABP46957.1| NADH dehydrogenase subunit H [Mycobacterium gilvum PYR-GCK]
Length=410
Score = 556 bits (1433), Expect = 2e-156, Method: Compositional matrix adjust.
Identities = 276/401 (69%), Positives = 322/401 (81%), Gaps = 8/401 (1%)
Query 2 TTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLAD 61
T FGHD WWL+ AK++ VFVFL+LTVL AIL ERK+LGRMQLR GPNRVGP+G LQSLAD
Sbjct 7 TLFGHDPWWLILAKSLGVFVFLLLTVLAAILIERKILGRMQLRLGPNRVGPRGLLQSLAD 66
Query 62 GIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLPV 121
GIKLALKE + P G+D+++Y AP+ISVIPAF AFA IP GPEVSVFGHRT LQ+TDLPV
Sbjct 67 GIKLALKEGLVPAGVDKWIYLAAPVISVIPAFMAFAVIPLGPEVSVFGHRTALQLTDLPV 126
Query 122 AVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGTM 181
AVL+IL +++IGVYGIVL GWASGS YPLLGG+RS+AQVISYE+AM LSF VF+ AGTM
Sbjct 127 AVLYILAVTSIGVYGIVLAGWASGSVYPLLGGLRSSAQVISYEIAMALSFVAVFIYAGTM 186
Query 182 STSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKF 241
STS IVAAQ+ VW+ FLLLPSF++YL SMVGETNRAPFDLPEAEGELV GFHTEYSSLKF
Sbjct 187 STSGIVAAQNDVWFIFLLLPSFLVYLTSMVGETNRAPFDLPEAEGELVGGFHTEYSSLKF 246
Query 242 AMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYF 301
AMFMLAEYVNMTTVSALA TLF GGWHAPWP+++ AN+ WWPL+WFTAKVW FLF +
Sbjct 247 AMFMLAEYVNMTTVSALATTLFLGGWHAPWPISIADGANSDWWPLLWFTAKVWLFLFFFM 306
Query 302 WLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLV---FSSIV 358
WLRATLPR+RYDQFM LGWKLLIPVSL W+ + A R+++NQGYQ W L+ + +
Sbjct 307 WLRATLPRMRYDQFMRLGWKLLIPVSLAWIAIVATTRAMQNQGYQGWVTALIGVAGVAAI 366
Query 359 VAAAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPL 399
+A+ + + + + Q D G AFP PPL
Sbjct 367 LASLLAWRALRARRRRTSHSPPAQSSDHG-----AFPVPPL 402
>gi|226306207|ref|YP_002766167.1| NADH-quinone oxidoreductase chain H [Rhodococcus erythropolis
PR4]
gi|226185324|dbj|BAH33428.1| NADH-quinone oxidoreductase chain H [Rhodococcus erythropolis
PR4]
Length=446
Score = 556 bits (1433), Expect = 2e-156, Method: Compositional matrix adjust.
Identities = 278/403 (69%), Positives = 327/403 (82%), Gaps = 7/403 (1%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FGHD WWLV KA+A+FVFL+LT LVAI AERK++ RMQ+R GPNRVGP+G LQSLA
Sbjct 15 LSAFGHDPWWLVIGKALAIFVFLVLTPLVAIYAERKVMARMQMRVGPNRVGPRGMLQSLA 74
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKE ITP G D+ +Y +AP+I+V+PAF AFA IPFGP+VS+FG R+PLQ+TDLP
Sbjct 75 DGIKLALKEGITPTGADKPIYLLAPVIAVVPAFMAFAVIPFGPQVSIFGTRSPLQLTDLP 134
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
V VL+IL +++IGVYGIVL GW+SGSTYPLLG +RSTAQVISYEVAMGLSFA VFL AGT
Sbjct 135 VGVLYILAVTSIGVYGIVLAGWSSGSTYPLLGALRSTAQVISYEVAMGLSFAAVFLYAGT 194
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTS IV AQ G WY FLLLPSF+IY+ +MVGETNRAPFDLPEAEGELV GFHTEYSSLK
Sbjct 195 MSTSGIVDAQQGAWYVFLLLPSFLIYVTAMVGETNRAPFDLPEAEGELVGGFHTEYSSLK 254
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNM TVSALA TLF GGWHAP+P N+W AN+GWWP++WF AKVWGFLF++
Sbjct 255 FAMFMLAEYVNMVTVSALATTLFLGGWHAPFPFNLWDGANSGWWPVLWFVAKVWGFLFVF 314
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
WLR+TLPRLRYDQFM LGWK+LIP +LVWVMV A +R+ RN+GY W L + ++ A
Sbjct 315 IWLRSTLPRLRYDQFMNLGWKVLIPAALVWVMVIATVRAFRNEGYNTWVVLLCVALVLGA 374
Query 361 AAMVLLLRKPLSAPGARASARQRGDEGTSPEPA----FPTPPL 399
A +++L + G R +A GT P A FP PPL
Sbjct 375 ALLIVLAG---TYRGRRRTAALVTASGTLPFDAMSGGFPVPPL 414
>gi|229490807|ref|ZP_04384642.1| NADH-quinone oxidoreductase subunit h [Rhodococcus erythropolis
SK121]
gi|229322197|gb|EEN87983.1| NADH-quinone oxidoreductase subunit h [Rhodococcus erythropolis
SK121]
Length=441
Score = 555 bits (1431), Expect = 4e-156, Method: Compositional matrix adjust.
Identities = 278/403 (69%), Positives = 327/403 (82%), Gaps = 7/403 (1%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FGHD WWLV KA+A+FVFL+LT LVAI AERK++ RMQ+R GPNRVGP+G LQSLA
Sbjct 15 LSAFGHDPWWLVIGKALAIFVFLVLTPLVAIYAERKVMARMQMRVGPNRVGPRGMLQSLA 74
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKE ITP G D+ +Y +AP+I+V+PAF AFA IPFGP+VS+FG +PLQ+TDLP
Sbjct 75 DGIKLALKEGITPTGADKPIYLLAPVIAVVPAFMAFAVIPFGPQVSIFGTLSPLQLTDLP 134
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
V VL+IL +++IGVYGIVL GW+SGSTYPLLG +RSTAQVISYEVAMGLSFA VFL AGT
Sbjct 135 VGVLYILAVTSIGVYGIVLAGWSSGSTYPLLGALRSTAQVISYEVAMGLSFAAVFLYAGT 194
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTS IV+AQ G WY FLLLPSF+IY+ +MVGETNRAPFDLPEAEGELV GFHTEYSSLK
Sbjct 195 MSTSGIVSAQQGAWYVFLLLPSFLIYVTAMVGETNRAPFDLPEAEGELVGGFHTEYSSLK 254
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNM TVSALA TLF GGWHAP+P N+W AN+GWWP++WF AKVWGFLF++
Sbjct 255 FAMFMLAEYVNMVTVSALATTLFLGGWHAPFPFNLWDGANSGWWPVLWFVAKVWGFLFVF 314
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
WLR+TLPRLRYDQFM LGWK+LIP +LVWVMV A +R+ RN+GY W L + ++ A
Sbjct 315 IWLRSTLPRLRYDQFMNLGWKILIPAALVWVMVIATVRAFRNEGYNTWVVLLCVALVLGA 374
Query 361 AAMVLLLRKPLSAPGARASARQRGDEGTSPEPA----FPTPPL 399
A +++L S R +A D GT P A FP PPL
Sbjct 375 ALLIVLAGTYRS---RRRTAALVPDSGTLPFDAMSGGFPVPPL 414
>gi|120402876|ref|YP_952705.1| NADH dehydrogenase subunit H [Mycobacterium vanbaalenii PYR-1]
gi|156632680|sp|A1T699.1|NUOH_MYCVP RecName: Full=NADH-quinone oxidoreductase subunit H; AltName:
Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit
H
gi|119955694|gb|ABM12699.1| NADH dehydrogenase subunit H [Mycobacterium vanbaalenii PYR-1]
Length=411
Score = 546 bits (1408), Expect = 2e-153, Method: Compositional matrix adjust.
Identities = 277/398 (70%), Positives = 317/398 (80%), Gaps = 5/398 (1%)
Query 2 TTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLAD 61
T FGHD WWLV AK++ +F FL+LTVL AIL ERK+LGRMQLR GPNRVGP G LQSLAD
Sbjct 7 TLFGHDPWWLVLAKSLGIFAFLLLTVLAAILIERKVLGRMQLRFGPNRVGPHGLLQSLAD 66
Query 62 GIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLPV 121
G+KLALKE + P G+D+++Y APIISVIPAF AFA IP G EVSVFGHRT LQ+TDLPV
Sbjct 67 GVKLALKEGLVPAGVDKWIYLAAPIISVIPAFMAFAVIPMGGEVSVFGHRTALQLTDLPV 126
Query 122 AVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGTM 181
AVL+IL +++IGVYGIVL GWASGS YPLLGG+RS+AQVISYE+AM LSFA VF+ AGTM
Sbjct 127 AVLYILAVTSIGVYGIVLAGWASGSVYPLLGGLRSSAQVISYEIAMALSFAAVFIYAGTM 186
Query 182 STSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKF 241
STS IVAAQ+ WY LLLPSF++Y+ +MVGETNRAPFDLPEAEGELV GFHTEYSSLKF
Sbjct 187 STSGIVAAQNDTWYIVLLLPSFLVYVTAMVGETNRAPFDLPEAEGELVGGFHTEYSSLKF 246
Query 242 AMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYF 301
AMFMLAEYVNMTTVSALA TLF GGWHAPWP+++ AN+GWWPL+WFT KVW FLF +
Sbjct 247 AMFMLAEYVNMTTVSALATTLFLGGWHAPWPISIADGANSGWWPLLWFTVKVWLFLFFFM 306
Query 302 WLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVAA 361
WLRATLPR+RYDQFMALGWK+LIPVSL W+M+ AI SLR+QGYQ P + VAA
Sbjct 307 WLRATLPRMRYDQFMALGWKILIPVSLGWIMIVAITHSLRDQGYQ--APATAAIGLAVAA 364
Query 362 AMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPL 399
++L L R G + AFP PPL
Sbjct 365 VILLALLGRSRLRARRIRPEPIRPAG---DGAFPVPPL 399
>gi|111022879|ref|YP_705851.1| NADH dehydrogenase subunit H [Rhodococcus jostii RHA1]
gi|123480827|sp|Q0S443.1|NUOH_RHOSR RecName: Full=NADH-quinone oxidoreductase subunit H; AltName:
Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit
H
gi|110822409|gb|ABG97693.1| probable NADH dehydrogenase subunit H [Rhodococcus jostii RHA1]
Length=450
Score = 543 bits (1399), Expect = 2e-152, Method: Compositional matrix adjust.
Identities = 278/402 (70%), Positives = 324/402 (81%), Gaps = 3/402 (0%)
Query 4 FGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLADGI 63
FGHD WWLV KA+A+FVFL+LT L+ ILAERK++ MQ+R GPNRVGP+G LQSLADGI
Sbjct 13 FGHDPWWLVLGKALAIFVFLVLTPLLTILAERKVMAWMQMRVGPNRVGPRGMLQSLADGI 72
Query 64 KLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLPVAV 123
KLALKE I P G+D+ +Y +AP+I+ +PAF AFA IPFGP VS+FGH TPLQ+TDLPVAV
Sbjct 73 KLALKEGIVPKGVDKPIYILAPVIAAVPAFMAFAVIPFGPAVSIFGHYTPLQLTDLPVAV 132
Query 124 LFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGTMST 183
L++L ++IGVYGIVL GWASGSTYPLLGG+RSTAQVISYE+AM LSFA VFL AGTMST
Sbjct 133 LYVLAATSIGVYGIVLAGWASGSTYPLLGGLRSTAQVISYEIAMALSFAAVFLDAGTMST 192
Query 184 SQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKFAM 243
S IVAAQ+ WY FLLLPSF+IY+ SMVGETNRAPFDLPEAEGELV GFHTEYSSL FAM
Sbjct 193 SGIVAAQEHTWYVFLLLPSFLIYVTSMVGETNRAPFDLPEAEGELVGGFHTEYSSLSFAM 252
Query 244 FMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYFWL 303
FMLAEYVNM TVSALA TLF GGWHAP+PL++W AN+GWWP++WFT KVWGFLF++ WL
Sbjct 253 FMLAEYVNMVTVSALATTLFLGGWHAPFPLSLWDGANSGWWPVLWFTLKVWGFLFVFVWL 312
Query 304 RATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVAAAM 363
RATLPRLRYDQFM LGWK+LIP+SLVWVM+ A +R+ RN+GY + LV + +VVA +
Sbjct 313 RATLPRLRYDQFMGLGWKILIPISLVWVMIVATVRAFRNEGYDARSIALVVAGLVVALVV 372
Query 364 VLLLRK---PLSAPGARASARQRGDEGTSPEPAFPTPPLLAG 402
V+LL K P P RG SPE P P+ G
Sbjct 373 VVLLWKRLRPGRVPAPEKPVEPRGRAELSPETLEPFDPMAGG 414
>gi|226365387|ref|YP_002783170.1| NADH dehydrogenase subunit H [Rhodococcus opacus B4]
gi|226243877|dbj|BAH54225.1| NADH-quinone oxidoreductase chain H [Rhodococcus opacus B4]
Length=450
Score = 543 bits (1398), Expect = 2e-152, Method: Compositional matrix adjust.
Identities = 283/404 (71%), Positives = 325/404 (81%), Gaps = 7/404 (1%)
Query 4 FGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLADGI 63
FGHD WWLV KA+AVFVFL+LT L+ ILAERK++ MQ+R GPNRVGP+G LQSLADGI
Sbjct 13 FGHDPWWLVLGKALAVFVFLVLTPLLTILAERKVMAWMQMRVGPNRVGPRGMLQSLADGI 72
Query 64 KLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLPVAV 123
KLALKE I P G+D+ +Y +APII+ +PAF AFA IPFGP VS+FGH TPLQ+TDLPVAV
Sbjct 73 KLALKEGIVPKGVDKPIYILAPIIAAVPAFMAFAVIPFGPAVSIFGHYTPLQLTDLPVAV 132
Query 124 LFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGTMST 183
L++L ++IGVYGIVL GWASGSTYPLLGG+RSTAQVISYE+AM LSFA VFL AGTMST
Sbjct 133 LYVLAATSIGVYGIVLAGWASGSTYPLLGGLRSTAQVISYEIAMALSFAAVFLDAGTMST 192
Query 184 SQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKFAM 243
S IVA+Q+ WY FLLLPSF+IY+ SMVGETNRAPFDLPEAEGELV GFHTEYSSL FAM
Sbjct 193 SGIVASQEHTWYVFLLLPSFLIYVTSMVGETNRAPFDLPEAEGELVGGFHTEYSSLSFAM 252
Query 244 FMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYFWL 303
FMLAEYVNM TVSALA TLF GGWHAP+PL++W AN+GWWP++WFT KVW FLF++ WL
Sbjct 253 FMLAEYVNMVTVSALATTLFLGGWHAPFPLSLWDGANSGWWPVLWFTLKVWAFLFVFVWL 312
Query 304 RATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVAAAM 363
RATLPRLRYDQFM LGWK+LIP+SLVWVMV A +R+ RN+GY T TLV + IVVA +
Sbjct 313 RATLPRLRYDQFMGLGWKILIPISLVWVMVVATVRAFRNEGYDGRTITLVVAGIVVALVV 372
Query 364 VLLLRKPL-----SAPGARASARQRGDEGTSPEPAFPTPPLLAG 402
V LL K L AP A R + SPE P P+ G
Sbjct 373 VALLWKRLRPGRVRAPEKPAEPHDRTEP--SPETLEPFDPMAGG 414
>gi|326382756|ref|ZP_08204446.1| NADH:ubiquinone oxidoreductase subunit H [Gordonia neofelifaecis
NRRL B-59395]
gi|326198346|gb|EGD55530.1| NADH:ubiquinone oxidoreductase subunit H [Gordonia neofelifaecis
NRRL B-59395]
Length=427
Score = 537 bits (1383), Expect = 1e-150, Method: Compositional matrix adjust.
Identities = 262/371 (71%), Positives = 312/371 (85%), Gaps = 3/371 (0%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
+++FGHD WWL+ AKAI +FVFL+LTVL+ ILAERK++ RMQ R GPNRVG GALQSLA
Sbjct 4 LSSFGHDAWWLMLAKAIGIFVFLVLTVLIGILAERKIMARMQYRIGPNRVGWHGALQSLA 63
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DG+KLALKE +TP G+D+ +Y +APIISV+PA AFA IP GPEVSVFGHRTPLQ+TDLP
Sbjct 64 DGVKLALKEGLTPLGVDKVLYLLAPIISVVPAIMAFAVIPMGPEVSVFGHRTPLQLTDLP 123
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
V VL++L L++IGVYGIVL GW+SGSTYPLLGG+RSTAQVISYE+AMGLSFA VFL++ T
Sbjct 124 VGVLYVLALASIGVYGIVLAGWSSGSTYPLLGGLRSTAQVISYEIAMGLSFAAVFLLSRT 183
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTS+IV Q WY L+LPSF+IY ISMVGETNRAPFDLPEAEGELV GFHTEYSSLK
Sbjct 184 MSTSEIVGGQVHHWYILLVLPSFIIYAISMVGETNRAPFDLPEAEGELVGGFHTEYSSLK 243
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNM TVSALA TLF GGW APWP+++W AN+GWWPL+WF AK+W FLF++
Sbjct 244 FAMFMLAEYVNMATVSALATTLFLGGWQAPWPISIWDGANSGWWPLLWFVAKMWTFLFVF 303
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVF--SSIV 358
FWLR TLPRLRYDQFM+LGWK+LIP +L WVMV A+IR + WT +L+ + +V
Sbjct 304 FWLRTTLPRLRYDQFMSLGWKVLIPFALGWVMVVAVIREASRDSSE-WTSSLILAGAGLV 362
Query 359 VAAAMVLLLRK 369
VAA +++ + K
Sbjct 363 VAALLIVAIAK 373
>gi|296140858|ref|YP_003648101.1| NADH dehydrogenase (quinone) [Tsukamurella paurometabola DSM
20162]
gi|296028992|gb|ADG79762.1| NADH dehydrogenase (quinone) [Tsukamurella paurometabola DSM
20162]
Length=430
Score = 529 bits (1363), Expect = 3e-148, Method: Compositional matrix adjust.
Identities = 276/414 (67%), Positives = 316/414 (77%), Gaps = 28/414 (6%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WL+ KA+AVF FL+LTVL AIL ERK++ RMQ R GPNR+G G LQSLA
Sbjct 14 LSAFGRDPLWLILVKAVAVFAFLVLTVLAAILIERKVMARMQHRYGPNRLGLFGILQSLA 73
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKE ITP G+DR VY +APII+ IPAF AFA IPFGPEVSVFG RTPLQ+TDLP
Sbjct 74 DGIKLALKEGITPSGVDRPVYLLAPIIATIPAFLAFAVIPFGPEVSVFGTRTPLQLTDLP 133
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVL+IL +++IGVYGIVL GW+SGSTYPLLGG+RSTAQVISYEVAMGLSFA VFL AGT
Sbjct 134 VAVLYILAVTSIGVYGIVLAGWSSGSTYPLLGGLRSTAQVISYEVAMGLSFAAVFLYAGT 193
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
M+TS IVAAQDG WY FLLLPSF +Y ISMVGETNRAPFDLPEAEGELV GFHTEYSSLK
Sbjct 194 MATSGIVAAQDGTWYIFLLLPSFAVYAISMVGETNRAPFDLPEAEGELVGGFHTEYSSLK 253
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNMTTVSALA TLF GGWHAPWPLN+W AN+GWWP++WF AKVW FLF +
Sbjct 254 FAMFMLAEYVNMTTVSALATTLFLGGWHAPWPLNLWDGANSGWWPVVWFVAKVWVFLFAF 313
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
WLR TLPRLRYDQFM GW+LLIP +LVW++VA +++ G+ T V + +V
Sbjct 314 IWLRTTLPRLRYDQFMRFGWQLLIPSALVWILVAGGVQAWALAGHD----TTVLAPVVSV 369
Query 361 AAMVLLLRKPLSAPGARASARQRGDEGTSPEP---------------AFPTPPL 399
A + ++ + R R + T PEP FP PPL
Sbjct 370 AFTLAVI--------GVLAVRHR-KQKTPPEPPDPQTYSLPFDPMAGGFPVPPL 414
>gi|262200414|ref|YP_003271622.1| NADH dehydrogenase [Gordonia bronchialis DSM 43247]
gi|262083761|gb|ACY19729.1| NADH dehydrogenase (quinone) [Gordonia bronchialis DSM 43247]
Length=433
Score = 526 bits (1354), Expect = 3e-147, Method: Compositional matrix adjust.
Identities = 262/401 (66%), Positives = 311/401 (78%), Gaps = 3/401 (0%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
+ FGHD WWL+ KA+AVF FL+ LVAIL ERK++ RMQ R GPNRVGP+GALQSLA
Sbjct 12 LADFGHDPWWLILIKAVAVFAFLVANPLVAILLERKIMARMQSRIGPNRVGPRGALQSLA 71
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DG+KLALKE I P G+D+ +Y +APII+V+PA AFA IPFGP VSVFGHRTPLQ+TDLP
Sbjct 72 DGVKLALKEGIIPSGVDKIIYVLAPIIAVVPAVMAFAVIPFGPMVSVFGHRTPLQLTDLP 131
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
V VL++L +++IGVYGIVL GW+SGSTYPLLGG+RSTAQVISYE+AMGL+FA +FL A T
Sbjct 132 VGVLYVLAITSIGVYGIVLAGWSSGSTYPLLGGLRSTAQVISYEIAMGLTFAAMFLDATT 191
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTS IVAAQD WY +LLPSFVIY ISMVGETNRAPFDLPEAEGELV GFHTEYSSLK
Sbjct 192 MSTSGIVAAQDRHWYVLILLPSFVIYAISMVGETNRAPFDLPEAEGELVGGFHTEYSSLK 251
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEY+NM TVSALA T+F GGW APWPL+ + AN+GWWP++WFT KVW F+F++
Sbjct 252 FAMFMLAEYINMVTVSALATTMFLGGWMAPWPLSAFDWANSGWWPILWFTLKVWVFMFVF 311
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVF--SSIV 358
WLR +LPRLRYDQFM LGWK+LIP+SL WVMV A+IR+ + T L+ + IV
Sbjct 312 IWLRTSLPRLRYDQFMNLGWKVLIPISLAWVMVVAVIRAATTDASEL-TRALISAGAGIV 370
Query 359 VAAAMVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPL 399
V A + + + + P G+ FP PPL
Sbjct 371 VTALICYAIWRSMRLPDQPDEIDSAGETFDPMAGGFPVPPL 411
>gi|333922085|ref|YP_004495666.1| NADH-quinone oxidoreductase subunit H [Amycolicicoccus subflavus
DQS3-9A1]
gi|333484306|gb|AEF42866.1| NADH-quinone oxidoreductase subunit H [Amycolicicoccus subflavus
DQS3-9A1]
Length=428
Score = 525 bits (1352), Expect = 5e-147, Method: Compositional matrix adjust.
Identities = 274/411 (67%), Positives = 324/411 (79%), Gaps = 4/411 (0%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WLV AKA+AVF FL+LTVLVAIL ERK++ MQ+R GPNRVGP G LQSLA
Sbjct 13 LSLFGQDPVWLVVAKAVAVFAFLVLTVLVAILVERKIIAWMQMRLGPNRVGPWGLLQSLA 72
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DG+KLALKE I P G+D+ +Y +AP+I+V+PA AFA IPFGPEVS+ G++TPLQ+TDLP
Sbjct 73 DGVKLALKEGIIPKGVDKPLYLLAPVIAVVPAIMAFAVIPFGPEVSILGNQTPLQLTDLP 132
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVL+IL ++++GVYGIVL GW+SGSTYPLLGG+RSTAQVISYE+AM LSF VFL AGT
Sbjct 133 VAVLYILAVTSVGVYGIVLAGWSSGSTYPLLGGLRSTAQVISYEIAMALSFVGVFLFAGT 192
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTS IVAAQ+G WY FLLLPSF+IY+ SMVGETNRAPFDLPEAEGELV GFHTEYSSL+
Sbjct 193 MSTSGIVAAQEGTWYVFLLLPSFLIYITSMVGETNRAPFDLPEAEGELVGGFHTEYSSLR 252
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEY+NM TVSALA TLFFGGW AP+P +MW ANTGW P++WF KVWGFLF++
Sbjct 253 FAMFMLAEYINMVTVSALATTLFFGGWRAPFPFSMWEGANTGWLPVLWFVLKVWGFLFVF 312
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
WLRATLPRLRYDQFM LGWK+LIPVSL WVMV A +R N GY T TLV + + +A
Sbjct 313 IWLRATLPRLRYDQFMNLGWKILIPVSLAWVMVVATVRGFYNAGYDAQTLTLVVAGVTLA 372
Query 361 AAMVLLLRKPLSAPGARASARQRGDEGTSPEP---AFPTPPLLAGATKENA 408
A +++ + + AR S + T +P FP PP L G T A
Sbjct 373 AIILIAVWFRMKGARARESRVPVAGQDTQFDPMAGGFPVPP-LPGQTSAQA 422
>gi|343926369|ref|ZP_08765874.1| NADH-quinone oxidoreductase chain H [Gordonia alkanivorans NBRC
16433]
gi|343763607|dbj|GAA12800.1| NADH-quinone oxidoreductase chain H [Gordonia alkanivorans NBRC
16433]
Length=443
Score = 521 bits (1341), Expect = 1e-145, Method: Compositional matrix adjust.
Identities = 250/339 (74%), Positives = 289/339 (86%), Gaps = 0/339 (0%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
+ FGHD WL+ KA+AVF FL++ LVAIL ERK++ RMQ R GPNRVGP+G LQSLA
Sbjct 11 LADFGHDPIWLIVVKAVAVFAFLVVNPLVAILLERKIMARMQTRIGPNRVGPRGILQSLA 70
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DG+KLALKE I P G+DR +Y +APII+V+PA AFA IPFGP VSVFGH TPLQ+TDLP
Sbjct 71 DGVKLALKEGIIPSGVDRVIYLLAPIIAVVPAVMAFAVIPFGPMVSVFGHETPLQLTDLP 130
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
V VL++L ++++GVYGIVL GW+SGSTYPLLGG+RSTAQVISYE+AMGL+FA VFL AGT
Sbjct 131 VGVLYVLAVTSVGVYGIVLAGWSSGSTYPLLGGLRSTAQVISYEIAMGLTFAAVFLDAGT 190
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTS IVAAQ+ WY LLLPSFVIY ISMVGETNRAPFDLPEAEGELV GFHTEYSSLK
Sbjct 191 MSTSGIVAAQEHHWYFLLLLPSFVIYAISMVGETNRAPFDLPEAEGELVGGFHTEYSSLK 250
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEY+NM TVSALA T+F GGW APWPL+ + AN+GWWP++WFT KVW FLF++
Sbjct 251 FAMFMLAEYINMVTVSALATTMFLGGWQAPWPLSAFDWANSGWWPVLWFTIKVWAFLFVF 310
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRS 339
WLR +LPRLRYDQFM LGWK+LIP+SL WVMV AIIR+
Sbjct 311 IWLRTSLPRLRYDQFMNLGWKVLIPISLTWVMVVAIIRA 349
>gi|169629227|ref|YP_001702876.1| NADH dehydrogenase subunit H [Mycobacterium abscessus ATCC 19977]
gi|169241194|emb|CAM62222.1| NADH-quinone oxidoreductase, H subunit NuoH [Mycobacterium abscessus]
Length=422
Score = 513 bits (1320), Expect = 3e-143, Method: Compositional matrix adjust.
Identities = 266/416 (64%), Positives = 326/416 (79%), Gaps = 10/416 (2%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WLV K +AVF FL+LTVL+AILAER++L MQ R GPNRVGP G LQSLA
Sbjct 7 LSQFGIDPLWLVLVKCVAVFAFLVLTVLIAILAERRVLAWMQRRIGPNRVGPFGLLQSLA 66
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DG+KLALKE +TP G+D+ +Y +APIISV+PA A+A IPFGP VSVFGHRTPLQ+TDLP
Sbjct 67 DGVKLALKEGLTPAGVDKPIYLLAPIISVVPAIVAYAVIPFGPVVSVFGHRTPLQLTDLP 126
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VA+LF+L ++++GVYGIVLGGWASGSTYPLLGG+RS+AQVISYE+AMGL+FA VFL+AGT
Sbjct 127 VAILFVLAVTSVGVYGIVLGGWASGSTYPLLGGLRSSAQVISYEIAMGLTFAAVFLLAGT 186
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTS IVAAQ+G WY FLLLPSF++Y+ +MVGETNRAPFDLPEAEGELV GFHTEYSSL+
Sbjct 187 MSTSGIVAAQEGRWYLFLLLPSFLVYVTAMVGETNRAPFDLPEAEGELVGGFHTEYSSLR 246
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEY+NM TVS LAAT+F GGWHAPWPL++ ANT W P +WF AKVWGF+F++
Sbjct 247 FAMFMLAEYINMATVSGLAATMFLGGWHAPWPLSLIDGANTSWLPALWFVAKVWGFMFLF 306
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
WLRATLPRLRYDQFM LGW++LIPV+LVW++V +++++ Y Y P+++ VA
Sbjct 307 MWLRATLPRLRYDQFMRLGWEVLIPVALVWIVVVGVVKAMGL--YGYGNPSIILGITGVA 364
Query 361 AA-----MVLLLRKPLSAPGARASARQRGDEGTSPEPAFPTPPLLAGA---TKENA 408
+ +V +L + P AR G P P P + GA TKE+A
Sbjct 365 VSLGSIGLVGVLSRRTQPPKPVLPARFDPMAGGFPVPPLPGQRVDTGAHPSTKEDA 420
>gi|289759282|ref|ZP_06518660.1| LOW QUALITY PROTEIN: NADH dehydrogenase subunit H [Mycobacterium
tuberculosis T85]
gi|289714846|gb|EFD78858.1| LOW QUALITY PROTEIN: NADH dehydrogenase subunit H [Mycobacterium
tuberculosis T85]
Length=294
Score = 511 bits (1315), Expect = 1e-142, Method: Compositional matrix adjust.
Identities = 260/278 (94%), Positives = 260/278 (94%), Gaps = 3/278 (1%)
Query 136 GIVLGGWASGSTYP---LLGGVRSTAQVISYEVAMGLSFATVFLMAGTMSTSQIVAAQDG 192
G WA G P G TAQVISYEVAMGLSFATVFLMAGTMSTSQIVAAQDG
Sbjct 17 GYTASCWAVGRPGPPTRCWAGCAPTAQVISYEVAMGLSFATVFLMAGTMSTSQIVAAQDG 76
Query 193 VWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKFAMFMLAEYVNM 252
VWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKFAMFMLAEYVNM
Sbjct 77 VWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKFAMFMLAEYVNM 136
Query 253 TTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYFWLRATLPRLRY 312
TTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYFWLRATLPRLRY
Sbjct 137 TTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYFWLRATLPRLRY 196
Query 313 DQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVAAAMVLLLRKPLS 372
DQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVAAAMVLLLRKPLS
Sbjct 197 DQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVAAAMVLLLRKPLS 256
Query 373 APGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG 410
APGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG
Sbjct 257 APGARASARQRGDEGTSPEPAFPTPPLLAGATKENAGG 294
>gi|54024629|ref|YP_118871.1| NADH dehydrogenase subunit H [Nocardia farcinica IFM 10152]
gi|81680061|sp|Q5YWD4.1|NUOHI_NOCFA RecName: Full=NADH-quinone oxidoreductase subunits H/I; AltName:
Full=NADH dehydrogenase I subunits H/I; AltName: Full=NDH-1
subunit H/I
gi|54016137|dbj|BAD57507.1| putative NADH dehydrogenase I chain H [Nocardia farcinica IFM
10152]
Length=597
Score = 510 bits (1314), Expect = 2e-142, Method: Compositional matrix adjust.
Identities = 262/415 (64%), Positives = 318/415 (77%), Gaps = 10/415 (2%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FGHD +WLV AK++ +FV+++L LVA+LAERK++ RMQ+R GPNRVGP G+LQS+A
Sbjct 4 LSLFGHDPFWLVVAKSVFLFVYIILIPLVAVLAERKVVARMQMRVGPNRVGPFGSLQSIA 63
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DG+K+A KE + P +D+ +Y +AP++SVIPAF AFA IP G EVSV G+ T LQ+TD+P
Sbjct 64 DGVKMAFKEDLVPAIVDKPIYLLAPVVSVIPAFMAFAVIPLGGEVSVAGNTTALQLTDMP 123
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
V VL+IL +++IGVYGIVL GWASGSTYPLLGG+RSTAQVISYE+AM L FA VFL AGT
Sbjct 124 VGVLYILAITSIGVYGIVLAGWASGSTYPLLGGLRSTAQVISYEIAMALCFAAVFLHAGT 183
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
M+TS IV AQ W+ FLLLPSF+IY +SMVGETNRAPFDLPEAEGELV GFHTEYSSLK
Sbjct 184 MATSGIVGAQHPTWFVFLLLPSFLIYCVSMVGETNRAPFDLPEAEGELVGGFHTEYSSLK 243
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNM TVSALA TLF GGW APWP N+ A+ GWW L+WFTAKVW F+F++
Sbjct 244 FAMFMLAEYVNMGTVSALATTLFLGGWSAPWPFNLIPGADAGWWGLLWFTAKVWTFMFVF 303
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
WLR TLPRLRYDQFM LGW+LLIPVSL+WVM+ A R LR G+ + T V + +
Sbjct 304 VWLRGTLPRLRYDQFMRLGWQLLIPVSLLWVMLVATARLLRADGHAWATGAQVVVGVALT 363
Query 361 AAMV-LLLRKPLSAPGARASARQRGDEGTSPEP---AFPTPPLLAGATK-ENAGG 410
AAM+ L LR G R +A + S E FPTPP+ A A + +N G
Sbjct 364 AAMIGLFLRA-----GRRPAAPPEPEPEPSGEAVFLGFPTPPVPADAHRVDNPKG 413
>gi|302543437|ref|ZP_07295779.1| NADH-quinone oxidoreductase, H subunit [Streptomyces hygroscopicus
ATCC 53653]
gi|302461055|gb|EFL24148.1| NADH-quinone oxidoreductase, H subunit [Streptomyces himastatinicus
ATCC 53653]
Length=456
Score = 491 bits (1265), Expect = 7e-137, Method: Compositional matrix adjust.
Identities = 243/410 (60%), Positives = 305/410 (75%), Gaps = 11/410 (2%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWL+ KA+ F FLMLTVL++I+ ERK++G MQLR GPNR GP G LQSLA
Sbjct 10 LSMFGRDPWWLILIKAVFCFAFLMLTVLISIVMERKVMGWMQLRIGPNRHGPWGMLQSLA 69
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DG+KL LKE + G D+ VY +API++ IPAF A A IPFGP EVSVFGHRT +Q+T
Sbjct 70 DGVKLMLKEDVVVKGADKLVYVLAPIVAAIPAFMAVAVIPFGPSGGEVSVFGHRTAMQLT 129
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLP+AVL+IL +++G+YGIVL GW+SGSTYPLLGG+RS AQ+ISYE+AMGLSFA VFL
Sbjct 130 DLPIAVLYILATASVGIYGIVLAGWSSGSTYPLLGGLRSCAQMISYEIAMGLSFAAVFLY 189
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+G+MSTSQIVA+Q WY LL SF+IY+++MVGETNRAPFD+PE+EG+LV GF+TEYS
Sbjct 190 SGSMSTSQIVASQQDRWYVVLLPVSFLIYIVAMVGETNRAPFDMPESEGDLVGGFNTEYS 249
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFA+FMLAEYVNM TVS +A TLF GGW APWP++ W AN GWWPL+WF KV
Sbjct 250 SIKFALFMLAEYVNMVTVSMVAVTLFLGGWRAPWPISTFWEGANHGWWPLLWFVGKVVSS 309
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSS 356
LF++ W+RA+LPR+RYDQFM LGWK+LIP+S+VW+M+ A +R+LRN+ Y + L
Sbjct 310 LFVFIWIRASLPRVRYDQFMKLGWKVLIPISMVWLMLVATVRALRNENYDNQSIVLYVGG 369
Query 357 IVVAAAMVLLLRKPLSAPGARASARQRGDEGTSPEPA-------FPTPPL 399
V+A ++ + GA A PEPA FP PPL
Sbjct 370 AVIALLLLSFVVDIFRDRGAAAKGEAGPAVEEGPEPAFDPMAGGFPVPPL 419
>gi|345008475|ref|YP_004810829.1| NAD(P)H-quinone oxidoreductase subunit 1 [Streptomyces violaceusniger
Tu 4113]
gi|344034824|gb|AEM80549.1| NAD(P)H-quinone oxidoreductase subunit 1 [Streptomyces violaceusniger
Tu 4113]
Length=452
Score = 491 bits (1265), Expect = 8e-137, Method: Compositional matrix adjust.
Identities = 245/413 (60%), Positives = 308/413 (75%), Gaps = 20/413 (4%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV KA+ F FLM+TVL++I+ ERK++G MQLR GPNR GP G LQSLA
Sbjct 9 LSMFGTDPWWLVLIKAVFCFAFLMVTVLISIVMERKVVGWMQLRIGPNRHGPWGMLQSLA 68
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DG+KL LKE + G D+ VY +AP+++ IPAF A A +PFGP EVS+FGHRT +Q+T
Sbjct 69 DGVKLMLKEDVVVKGADKVVYVLAPVVAAIPAFMAVAVMPFGPSGGEVSIFGHRTAMQLT 128
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLP+AVL+IL +++G+YGIVL GW+SGSTYPLLGG+RS AQ+ISYE+AMGLSFA VFL
Sbjct 129 DLPIAVLYILATASVGIYGIVLAGWSSGSTYPLLGGLRSCAQMISYEIAMGLSFAAVFLY 188
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+G+MSTSQIV Q WYA LL SF+IY++SM+GETNRAPFD+PE+EG+LV GF+TEYS
Sbjct 189 SGSMSTSQIVEGQHDRWYAVLLPVSFLIYIVSMIGETNRAPFDMPESEGDLVGGFNTEYS 248
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFAMFMLAEY+NM TVS +A TLF GGW APWP++ W AN GWWP++WF KV
Sbjct 249 SIKFAMFMLAEYINMVTVSMVAVTLFLGGWRAPWPISTFWEGANHGWWPMLWFVGKVVTS 308
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSS 356
LF++ W+R TLPR+RYDQFM LGWK+LIP+S+VW+M+ A +R+LRN+ Y Y L S
Sbjct 309 LFVFIWVRGTLPRVRYDQFMKLGWKVLIPISMVWLMLVATVRALRNENYDYQDIVLYVGS 368
Query 357 IVVA---AAMVLLLRKPLSAPGARASARQRGDEGTSPEPA-------FPTPPL 399
V+A + V+ + SA A A A Q PEPA FP PPL
Sbjct 369 AVIALLLLSFVVDFFRDRSATEAEAGAEQ------GPEPAFDPMAGGFPVPPL 415
>gi|319950458|ref|ZP_08024372.1| NADH:ubiquinone oxidoreductase subunit H [Dietzia cinnamea P4]
gi|319435881|gb|EFV91087.1| NADH:ubiquinone oxidoreductase subunit H [Dietzia cinnamea P4]
Length=454
Score = 484 bits (1246), Expect = 1e-134, Method: Compositional matrix adjust.
Identities = 259/387 (67%), Positives = 306/387 (80%), Gaps = 1/387 (0%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV AK +AVFVFL++TVL AI ERK+L MQ+R GPNRVGP G LQSLA
Sbjct 4 LSAFGADPWWLVLAKVLAVFVFLVVTVLAAIYLERKILAWMQMRIGPNRVGPGGILQSLA 63
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DG+K+ALKE + P G+D+ +Y +AP+I+VIPAF AFA IPFGP VSVFG TPLQ+TDL
Sbjct 64 DGVKIALKEGLIPAGVDKPIYLLAPVIAVIPAFMAFAVIPFGPVVSVFGTATPLQLTDLH 123
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
V +L++L +++IGVYGIVL GW+SGSTYPLLGG+RSTAQVISYE+AM LSF VFL AGT
Sbjct 124 VGILYVLAVTSIGVYGIVLAGWSSGSTYPLLGGLRSTAQVISYEIAMALSFVGVFLFAGT 183
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTS IVAAQ VW+ FLL PSFVIY+ISMVGETNRAPFDLPEAEGELV GFHTEYSSL+
Sbjct 184 MSTSGIVAAQSQVWFVFLLAPSFVIYVISMVGETNRAPFDLPEAEGELVGGFHTEYSSLR 243
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIY 300
FAMFMLAEYVNMTTVSALAATLF GGW AP P ++ A++GWW L+WF AKVW F+F++
Sbjct 244 FAMFMLAEYVNMTTVSALAATLFLGGWQAPLPFSLIPGADSGWWALLWFVAKVWTFMFLF 303
Query 301 FWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVVA 360
WLRATLPRLRYDQFMA GWK+LIPVSL WVM A IR + TP +V + +V
Sbjct 304 IWLRATLPRLRYDQFMAFGWKVLIPVSLAWVMAVATIRVVVGPESDLLTPAMVIAGLVAV 363
Query 361 AAMVLLLRKPLSAPGARASARQRGDEG 387
A +V++ R + G RA+ G G
Sbjct 364 AVIVVVHRI-RTRRGGRAAPTDAGTRG 389
>gi|269128606|ref|YP_003301976.1| NADH dehydrogenase (quinone) [Thermomonospora curvata DSM 43183]
gi|268313564|gb|ACY99938.1| NADH dehydrogenase (quinone) [Thermomonospora curvata DSM 43183]
Length=438
Score = 478 bits (1231), Expect = 6e-133, Method: Compositional matrix adjust.
Identities = 236/406 (59%), Positives = 307/406 (76%), Gaps = 7/406 (1%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
+++FG D WWL+ K +A+F+FL+LTVL+ + ER+++GRMQLR GPNR GP G LQ LA
Sbjct 13 ISSFGRDPWWLIGGKVLAIFIFLVLTVLMTMWIERRVIGRMQLRVGPNRAGPFGLLQGLA 72
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLP 120
DGIKLALKE ITP +D+ V+ +AP+I+ +PAF +F IPFGP VS+FGH+TPLQ TDLP
Sbjct 73 DGIKLALKEDITPRQVDKVVFILAPVIAAVPAFVSFVIIPFGPTVSIFGHQTPLQGTDLP 132
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
VAVL +L ++++G YGIVL GW+S S Y LLGG+RS AQVISYE+AMGLSF VFL AGT
Sbjct 133 VAVLLVLAMASMGAYGIVLAGWSSMSPYALLGGLRSAAQVISYEIAMGLSFVAVFLFAGT 192
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTS IVAAQ W+A +LLPSF++Y+I+M+GE+NR PFDLPE EGE+V GFHTEYSSLK
Sbjct 193 MSTSGIVAAQADRWFAVMLLPSFIVYVITMMGESNRIPFDLPEGEGEIVGGFHTEYSSLK 252
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGFLFI 299
FAMF LAEY+N+ T+SALA TLF GGW AP P++ +W AN GWWP++WF K+ F+F
Sbjct 253 FAMFFLAEYINLATLSALATTLFLGGWRAPAPISTIWPGANQGWWPVLWFMIKIGLFIFF 312
Query 300 YFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSSIVV 359
+ WLR +LPR+RYDQ M LGWK+L+P SL W+++ A +R LRN GY T ++S++ +
Sbjct 313 FIWLRGSLPRVRYDQLMKLGWKVLMPFSLGWILLVATVRGLRNAGYDM-TQVAIWSAVAI 371
Query 360 AAAMVLLLRKPLSAPGARASARQRGDEGTSPEP----AFPTPPLLA 401
+VL + + A G R S ++ + + EP AFP PPL A
Sbjct 372 GVLLVLSIVWDM-ARGDRDSGKEIVPDLQAAEPERAGAFPVPPLDA 416
>gi|311897897|dbj|BAJ30305.1| putative NADH-quinone oxidoreductase subunit H [Kitasatospora
setae KM-6054]
Length=458
Score = 477 bits (1228), Expect = 1e-132, Method: Compositional matrix adjust.
Identities = 233/348 (67%), Positives = 286/348 (83%), Gaps = 4/348 (1%)
Query 4 FGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLADGI 63
FG D WWLV KA+ F FL+ TVL+AI+ ERK++ MQLR GPNR GP G LQSLADG+
Sbjct 30 FGRDPWWLVLLKAVFCFAFLVGTVLIAIVWERKVVAWMQLRIGPNRHGPWGLLQSLADGV 89
Query 64 KLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQITDLP 120
KLALKE + G D+ VY +API++ IPAF AFA IPFGP EVS+FG RTPLQ+TDLP
Sbjct 90 KLALKEDLVVKGADKAVYVLAPIVAAIPAFMAFAVIPFGPAGNEVSIFGTRTPLQLTDLP 149
Query 121 VAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGT 180
+A+L+IL +++G+YGIVL GW+SGSTYPLLGG+RS+AQ+ISYE+AMGLSFA VF+ +G+
Sbjct 150 IALLYILATASVGIYGIVLAGWSSGSTYPLLGGIRSSAQMISYEIAMGLSFAAVFIYSGS 209
Query 181 MSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLK 240
MSTS+IVA+Q W+A LL SF++Y+I+MVGETNRAPFDLPEAEGELV GF+TEYSSLK
Sbjct 210 MSTSEIVASQQPTWFAVLLPVSFIVYVIAMVGETNRAPFDLPEAEGELVGGFNTEYSSLK 269
Query 241 FAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGFLFI 299
FAMFMLAEYVNM TVSA+A+TLF GGW APWP++ W AN GWWP++W K+ LF
Sbjct 270 FAMFMLAEYVNMVTVSAVASTLFLGGWRAPWPISTFWEGANHGWWPMLWIVLKIQLLLFF 329
Query 300 YFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQY 347
+ WLR TLPRLRYDQFM LGWK+LIPVSLVW+++ A +R+LRN+GY +
Sbjct 330 FIWLRGTLPRLRYDQFMKLGWKVLIPVSLVWLVMVATVRALRNEGYDF 377
>gi|297159515|gb|ADI09227.1| NADH dehydrogenase subunit H [Streptomyces bingchenggensis BCW-1]
Length=459
Score = 476 bits (1226), Expect = 2e-132, Method: Compositional matrix adjust.
Identities = 224/351 (64%), Positives = 283/351 (81%), Gaps = 4/351 (1%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV KA+ F FLM+TVL++I+ ERK++G MQLR GPNR GP G LQSLA
Sbjct 11 LSMFGRDPWWLVLIKAVFCFAFLMVTVLISIVMERKVVGWMQLRIGPNRHGPWGMLQSLA 70
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DG+KL LKE I G D+ VY +AP+++ IPAF A A IPFGP E+S+FG RT +Q+T
Sbjct 71 DGVKLMLKEDIVVKGADKVVYVLAPVVAAIPAFMAVAVIPFGPADNEISIFGQRTTMQLT 130
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLP+A+L+IL +++G+YGIVL GW+SGSTYPLLGG+RS AQ+ISYE+AMG+SFA VFL
Sbjct 131 DLPIAILYILATASVGIYGIVLAGWSSGSTYPLLGGLRSCAQMISYEIAMGMSFAAVFLY 190
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+G+MSTS+IV +Q WYA LL SF+IY+I+MVGETNRAPFD+PE+EG+LV GF+TEYS
Sbjct 191 SGSMSTSEIVNSQHDRWYALLLPVSFIIYIIAMVGETNRAPFDMPESEGDLVGGFNTEYS 250
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFAMFMLAEY+NM TVS +A TLF GGW APWP++ W AN GWWP++WF KV
Sbjct 251 SIKFAMFMLAEYINMVTVSMVAVTLFLGGWRAPWPISTFWEGANHGWWPMLWFVGKVLSL 310
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQY 347
LF + W+R TLPR+RYDQFM LGWK+LIPVS+VW+M+ A +R+LRN+ Y Y
Sbjct 311 LFAFVWIRGTLPRVRYDQFMKLGWKVLIPVSMVWLMLVATVRALRNENYDY 361
>gi|302553433|ref|ZP_07305775.1| NADH-quinone oxidoreductase subunit H [Streptomyces viridochromogenes
DSM 40736]
gi|302471051|gb|EFL34144.1| NADH-quinone oxidoreductase subunit H [Streptomyces viridochromogenes
DSM 40736]
Length=458
Score = 474 bits (1220), Expect = 1e-131, Method: Compositional matrix adjust.
Identities = 238/409 (59%), Positives = 303/409 (75%), Gaps = 15/409 (3%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV KA+ F FLM+TVLV+I+ ERK++ MQLR GPNR GP G LQSLA
Sbjct 10 LSMFGTDPWWLVGIKAVFCFAFLMVTVLVSIVMERKVVAWMQLRIGPNRHGPWGMLQSLA 69
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DGIKL LKE + D+ VY +API++ IPAF A A IPFGP E+S+FG RT +Q+T
Sbjct 70 DGIKLMLKEDVVVKRADKVVYVLAPIVAAIPAFMAIAVIPFGPSGNEISIFGQRTTMQLT 129
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLP+A+L++L ++++G+YGIVL GW+SGSTYPLLGG+RS AQ+ISYE+AMG +FA+VFL
Sbjct 130 DLPIAMLYVLAVASVGIYGIVLAGWSSGSTYPLLGGLRSCAQMISYEIAMGAAFASVFLY 189
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+G+MSTS IV Q WY LL SFV+Y+++MVGETNRAPFD+PE+EG+LV GF+TEYS
Sbjct 190 SGSMSTSTIVEQQQDRWYIVLLPLSFVLYIVTMVGETNRAPFDMPESEGDLVGGFNTEYS 249
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFAMFMLAEYVNM TVSA+A TLF GGW APWP++ W AN GWWP++WFT KV
Sbjct 250 SIKFAMFMLAEYVNMVTVSAVATTLFLGGWRAPWPISTFWEGANHGWWPMLWFTVKVQLL 309
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSS 356
LF++ W+R TLPR+RYDQ M LGWK+LIPVSLVW+M+ A +R+LRN+GY + L
Sbjct 310 LFMFIWIRGTLPRVRYDQLMKLGWKVLIPVSLVWLMLVASVRALRNEGYDFGDIAL---- 365
Query 357 IVVAAAMVLLLRKPLSAPGARASARQRGDEGTSP---EP---AFPTPPL 399
V ++ LL A R ++Q G +P +P FP PPL
Sbjct 366 -YVGGGVLALLVLSFVADMFREKSKQDGGPAETPPAFDPMAGGFPVPPL 413
>gi|337767476|emb|CCB76187.1| NADH-quinone oxidoreductase subunit H [Streptomyces cattleya
NRRL 8057]
Length=465
Score = 473 bits (1217), Expect = 3e-131, Method: Compositional matrix adjust.
Identities = 230/351 (66%), Positives = 284/351 (81%), Gaps = 4/351 (1%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV KA+ F F M+TVL +I+ ERK++ MQLR GPNR GP G LQSLA
Sbjct 21 LSYFGRDPWWLVVLKAVFCFAFAMVTVLFSIVWERKVVAWMQLRIGPNRHGPWGMLQSLA 80
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DG+KL LKE + G D+ VY +AP+++ IPAF AFA IPFGP E+SVFG RTP+Q+T
Sbjct 81 DGVKLMLKEDVVVRGADKVVYILAPVVAAIPAFMAFAVIPFGPADNEISVFGVRTPMQLT 140
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLPV +L++L ++IG+YGIVL GW+SGSTYPLLGG+RSTAQ+ISYE+AMG+SFA VFL
Sbjct 141 DLPVGILYVLATASIGIYGIVLAGWSSGSTYPLLGGLRSTAQMISYELAMGVSFAAVFLY 200
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+ +MSTSQIVAAQ W+ LL SF+IY+++MVGETNRAPFDLPEAEGELV GF+TEYS
Sbjct 201 SHSMSTSQIVAAQHDRWFIALLPVSFLIYIVAMVGETNRAPFDLPEAEGELVGGFNTEYS 260
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFAMFMLAEYVNM TVSA+A TLF GGW APWP++ WA AN GWWPL+WFT K+
Sbjct 261 SIKFAMFMLAEYVNMVTVSAVATTLFLGGWRAPWPISGFWAGANHGWWPLLWFTIKIQLL 320
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQY 347
LF++ WLR TLPR+RYDQFM LGWK+LIPVSL W+M+ A +R+LR++ Y +
Sbjct 321 LFVFIWLRGTLPRMRYDQFMKLGWKVLIPVSLAWLMLVAAVRALRDENYDF 371
>gi|294630803|ref|ZP_06709363.1| NADH-quinone oxidoreductase, H subunit [Streptomyces sp. e14]
gi|292834136|gb|EFF92485.1| NADH-quinone oxidoreductase, H subunit [Streptomyces sp. e14]
Length=454
Score = 471 bits (1213), Expect = 7e-131, Method: Compositional matrix adjust.
Identities = 241/406 (60%), Positives = 300/406 (74%), Gaps = 9/406 (2%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV KA+ F FLM+TVL +I+ ERK++ MQLR GPNR GP G LQSLA
Sbjct 10 LSMFGTDPWWLVVVKAVFCFAFLMVTVLFSIVWERKVVAWMQLRIGPNRHGPWGMLQSLA 69
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DGIKL LKE + D+ VY +API++ IPAF A A IPFGP EVSVFGHRT +Q+T
Sbjct 70 DGIKLMLKEDVVVKRADKVVYVLAPIVAAIPAFMAIAVIPFGPADNEVSVFGHRTAMQLT 129
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLP+A+L+IL ++++G+YGIVL GW+SGSTYPLLGG+RS AQ+ISYE+AMG +FA+VFL
Sbjct 130 DLPIAMLYILAVASVGIYGIVLAGWSSGSTYPLLGGLRSCAQMISYEIAMGAAFASVFLY 189
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+G+MSTS IV Q WY LL SFV+Y+++MVGETNRAPFD+PE+EG+LV GF+TEYS
Sbjct 190 SGSMSTSTIVEQQHDRWYILLLPVSFVLYIVTMVGETNRAPFDMPESEGDLVGGFNTEYS 249
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFAMFMLAEYVNM TVSA++ TLF GGW APWP++ W AN GWWPL+WF KV
Sbjct 250 SIKFAMFMLAEYVNMVTVSAVSTTLFLGGWRAPWPISTFWEGANHGWWPLLWFVVKVQLL 309
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSS 356
LF + WLR TLPR+RYDQ M LGWK+LIPVS+VW+M+ A +R+LRNQ Y + L
Sbjct 310 LFFFIWLRGTLPRVRYDQLMKLGWKVLIPVSVVWLMLVATVRTLRNQNYDFADIALYVGG 369
Query 357 IVVAAAMVLLLRKPLSAPGARASARQRGDEGTSPEP---AFPTPPL 399
V+ A +VL + A+A RQ E +P FP PPL
Sbjct 370 GVL-ALLVLSFVADMFREKAKAD-RQPAAEPAGFDPMAGGFPVPPL 413
>gi|329935990|ref|ZP_08285790.1| NADH dehydrogenase subunit NuoH [Streptomyces griseoaurantiacus
M045]
gi|329304468|gb|EGG48346.1| NADH dehydrogenase subunit NuoH [Streptomyces griseoaurantiacus
M045]
Length=459
Score = 471 bits (1212), Expect = 1e-130, Method: Compositional matrix adjust.
Identities = 235/406 (58%), Positives = 301/406 (75%), Gaps = 7/406 (1%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV KA+ F FLM+TVL +I+ ERK++ MQLR GPNR GP G LQSLA
Sbjct 10 LSMFGTDPWWLVVVKAVFCFAFLMVTVLFSIVWERKVVAWMQLRIGPNRHGPWGMLQSLA 69
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DGIKL LKE + D+ VY +API++ IPAF A A IPFGP EVS+FGHRT +Q+T
Sbjct 70 DGIKLMLKEDLVVKRADKVVYVLAPIVAAIPAFMAIAVIPFGPAGNEVSIFGHRTAMQLT 129
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLP+A+L+IL ++++G+YGIVL GW+SGSTYPLLGG+RS AQ+ISYE+AMG +FA+VFL
Sbjct 130 DLPIAMLYILAVASVGIYGIVLAGWSSGSTYPLLGGLRSAAQMISYEIAMGAAFASVFLY 189
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+G+MSTS IV Q WY LL SF++Y+++MVGETNRAPFD+PE+EG+LV GF+TEYS
Sbjct 190 SGSMSTSTIVEQQQDRWYILLLPVSFILYIVTMVGETNRAPFDMPESEGDLVGGFNTEYS 249
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFAMFMLAEYVNM TVSA++ TLF GGW APWP++ W AN GWWP++WF KV
Sbjct 250 SIKFAMFMLAEYVNMVTVSAVSTTLFLGGWRAPWPISTFWEGANHGWWPMLWFVVKVQLL 309
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSS 356
LF + WLR TLPR+RYDQ M LGWK+LIPVS+VW+M+ A +R+LRN+ Y + L +
Sbjct 310 LFFFIWLRGTLPRVRYDQLMKLGWKVLIPVSVVWLMLVATVRALRNENYGFTDIALYVAG 369
Query 357 IVVAAAMVLLLRKPLSAPGARASARQRGDEGTSPEP---AFPTPPL 399
V+A ++ L G R ++ E T+ +P FP PPL
Sbjct 370 GVLALLLLSFLVDMFRDKGKRGQEQEAAAEQTAFDPMAGGFPVPPL 415
>gi|182436770|ref|YP_001824489.1| NADH dehydrogenase subunit H [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326777365|ref|ZP_08236630.1| NADH dehydrogenase (quinone) [Streptomyces cf. griseus XylebKG-1]
gi|178465286|dbj|BAG19806.1| putative NADH dehydrogenase chain H [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326657698|gb|EGE42544.1| NADH dehydrogenase (quinone) [Streptomyces griseus XylebKG-1]
Length=467
Score = 470 bits (1209), Expect = 2e-130, Method: Compositional matrix adjust.
Identities = 238/412 (58%), Positives = 303/412 (74%), Gaps = 20/412 (4%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV KA+ F FLM+TVL +I+ ERK++ MQLR GPNR GP G LQSLA
Sbjct 21 LSMFGTDPWWLVVIKAVFCFAFLMVTVLFSIVWERKVVAWMQLRIGPNRNGPWGMLQSLA 80
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DG+KL LKE + D+ VY +AP+I+ IPAF A A IPFGP +VS+FG RT +Q+T
Sbjct 81 DGMKLMLKEDVVVKRADKVVYILAPVIAAIPAFMAIAVIPFGPADNQVSIFGQRTTMQLT 140
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLP+A+L+IL ++++G+YG+VL GW+SGSTYPLLGG+RS AQ+ISYE+AMG +FA+VFL
Sbjct 141 DLPIAMLYILAVASVGIYGLVLAGWSSGSTYPLLGGLRSAAQMISYEIAMGAAFASVFLY 200
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+G+MSTS IV AQ W+ LL SF+IY+I+MVGETNRAPFD+PE+EG+LV GF+TEYS
Sbjct 201 SGSMSTSAIVEAQADRWFVILLPVSFIIYIITMVGETNRAPFDMPESEGDLVGGFNTEYS 260
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFAMFMLAEYVNM TVSA++ TLF GGW AP+P++ W AN GWWP++WF KV
Sbjct 261 SIKFAMFMLAEYVNMVTVSAVSVTLFLGGWRAPYPISTFWEGANQGWWPMLWFVLKVQLL 320
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSS 356
LF + WLR TLPR+RYDQ M LGWK+LIPVS+VW+M+ A +R+LRN+GY FS
Sbjct 321 LFFFIWLRGTLPRVRYDQLMKLGWKVLIPVSVVWLMLVATVRALRNEGYD-------FSR 373
Query 357 IV--VAAAMVLLLRKPLSAPGARASARQRGDEGTSPEPA-------FPTPPL 399
IV V AA++ +L R + +E PEPA FP PPL
Sbjct 374 IVLYVGAAVLAILLISFIVDMFRDRRNRAEEEAAGPEPAFDPMAGGFPVPPL 425
>gi|289769827|ref|ZP_06529205.1| NuoH [Streptomyces lividans TK24]
gi|289700026|gb|EFD67455.1| NuoH [Streptomyces lividans TK24]
Length=465
Score = 469 bits (1208), Expect = 3e-130, Method: Compositional matrix adjust.
Identities = 227/351 (65%), Positives = 282/351 (81%), Gaps = 4/351 (1%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV KA+ F FLM+TVL +I+ ERK++ MQLR GPNR GP G LQSLA
Sbjct 10 LSMFGTDPWWLVVIKAVFCFAFLMVTVLFSIVWERKVVAWMQLRIGPNRHGPWGMLQSLA 69
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DGIKL LKE + D+ VY +API++ IPAF A A IPFGP EVS+FGHRT +Q+T
Sbjct 70 DGIKLMLKEDVIVKRADKAVYVLAPIVAAIPAFMAIAVIPFGPAGNEVSIFGHRTAMQLT 129
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLP+A+LFIL ++++G+YGIVL GW+SGSTYPLLGG+RS AQ+ISYE+AMG +FA+VFL
Sbjct 130 DLPIAMLFILAVASVGIYGIVLAGWSSGSTYPLLGGLRSCAQMISYEIAMGAAFASVFLY 189
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+G+MSTS+IVA QD WY LL SF++Y+++MVGETNRAPFD+PE+EG+LV GF+TEYS
Sbjct 190 SGSMSTSEIVAQQDDRWYIVLLPVSFILYIVTMVGETNRAPFDMPESEGDLVGGFNTEYS 249
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFAMFMLAEYVNM TVSA+A TLF GGW APWP++ W AN GWWPL+WF KV
Sbjct 250 SIKFAMFMLAEYVNMVTVSAVATTLFLGGWRAPWPISTFWEGANHGWWPLLWFVVKVQLL 309
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQY 347
LF + WLR TLPR+RYDQ M LGWK+LIPVSLVW+M+ A +R+LRN+ Y +
Sbjct 310 LFFFIWLRGTLPRVRYDQLMKLGWKVLIPVSLVWLMLVATVRALRNENYGF 360
>gi|21222952|ref|NP_628731.1| NADH dehydrogenase subunit H [Streptomyces coelicolor A3(2)]
gi|81789729|sp|Q9XAR1.1|NUOH_STRCO RecName: Full=NADH-quinone oxidoreductase subunit H; AltName:
Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit
H
gi|5042270|emb|CAB44524.1| NuoH, NADH dehydrogenase subunit [Streptomyces coelicolor A3(2)]
Length=467
Score = 469 bits (1208), Expect = 3e-130, Method: Compositional matrix adjust.
Identities = 227/351 (65%), Positives = 282/351 (81%), Gaps = 4/351 (1%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV KA+ F FLM+TVL +I+ ERK++ MQLR GPNR GP G LQSLA
Sbjct 10 LSMFGTDPWWLVVIKAVFCFAFLMVTVLFSIVWERKVVAWMQLRIGPNRHGPWGMLQSLA 69
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DGIKL LKE + D+ VY +API++ IPAF A A IPFGP EVS+FGHRT +Q+T
Sbjct 70 DGIKLMLKEDVIVKRADKAVYVLAPIVAAIPAFMAIAVIPFGPAGNEVSIFGHRTAMQLT 129
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLP+A+LFIL ++++G+YGIVL GW+SGSTYPLLGG+RS AQ+ISYE+AMG +FA+VFL
Sbjct 130 DLPIAMLFILAVASVGIYGIVLAGWSSGSTYPLLGGLRSCAQMISYEIAMGAAFASVFLY 189
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+G+MSTS+IVA QD WY LL SF++Y+++MVGETNRAPFD+PE+EG+LV GF+TEYS
Sbjct 190 SGSMSTSEIVAQQDDRWYIVLLPVSFILYIVTMVGETNRAPFDMPESEGDLVGGFNTEYS 249
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFAMFMLAEYVNM TVSA+A TLF GGW APWP++ W AN GWWPL+WF KV
Sbjct 250 SIKFAMFMLAEYVNMVTVSAVATTLFLGGWRAPWPISTFWEGANHGWWPLLWFVVKVQLL 309
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQY 347
LF + WLR TLPR+RYDQ M LGWK+LIPVSLVW+M+ A +R+LRN+ Y +
Sbjct 310 LFFFIWLRGTLPRVRYDQLMKLGWKVLIPVSLVWLMLVATVRALRNENYGF 360
>gi|254391144|ref|ZP_05006351.1| NADH-quinone oxidoreductase subunit H [Streptomyces clavuligerus
ATCC 27064]
gi|294814401|ref|ZP_06773044.1| NADH-quinone oxidoreductase subunit H [Streptomyces clavuligerus
ATCC 27064]
gi|326442791|ref|ZP_08217525.1| NADH:ubiquinone oxidoreductase subunit H [Streptomyces clavuligerus
ATCC 27064]
gi|197704838|gb|EDY50650.1| NADH-quinone oxidoreductase subunit H [Streptomyces clavuligerus
ATCC 27064]
gi|294327000|gb|EFG08643.1| NADH-quinone oxidoreductase subunit H [Streptomyces clavuligerus
ATCC 27064]
Length=459
Score = 468 bits (1204), Expect = 9e-130, Method: Compositional matrix adjust.
Identities = 233/409 (57%), Positives = 303/409 (75%), Gaps = 13/409 (3%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV KA+ F FLM+TVL +I+ ERK++ MQLR GPNR GP G LQSLA
Sbjct 13 LSMFGRDPWWLVLIKAVFCFAFLMVTVLFSIVWERKVVAWMQLRIGPNRHGPWGLLQSLA 72
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DG+KL LKE + D+ VY +API++ IPAF A A IPFGP EVS+FG RT +Q+T
Sbjct 73 DGVKLMLKEDVVVKRADKVVYILAPIVAAIPAFMAIAVIPFGPAGNEVSIFGQRTTMQLT 132
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLP+A+L++L ++++G+YGIVL GW+SGSTYPLLGG+RS AQ+ISYE+AMG +FA+VFL
Sbjct 133 DLPIAMLYVLAVASVGIYGIVLAGWSSGSTYPLLGGLRSCAQMISYEIAMGAAFASVFLY 192
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+G+MSTS IV AQ WY LL SF+IY+++MVGETNRAPFD+PE+EG+LV GF+TEYS
Sbjct 193 SGSMSTSAIVEAQADRWYVLLLPVSFIIYIVTMVGETNRAPFDMPESEGDLVGGFNTEYS 252
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFA+FMLAEYVNM TVSA++ TLF GGW AP+P++ W AN GWWP++WF KV
Sbjct 253 SIKFALFMLAEYVNMVTVSAVSVTLFLGGWRAPYPISTFWEGANHGWWPMLWFVIKVQLL 312
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSS 356
LF + WLR TLPR+RYDQ M LGWK+LIPVS+VW+M+ A +R+LRN+ Y + L +
Sbjct 313 LFFFIWLRGTLPRVRYDQLMKLGWKVLIPVSVVWLMLVATVRALRNENYDFQQIVLYVAG 372
Query 357 IVVAAAMVLLLRKPLSAPGARASARQRGD-EGTSPE-----PAFPTPPL 399
V+A +LLL R +++GD E +P+ +P PPL
Sbjct 373 AVIA---LLLLSFVADIFRDRRDQQEQGDREAAAPDFDPMAGGYPVPPL 418
>gi|290958253|ref|YP_003489435.1| NADH dehydrogenase subunit NuoH [Streptomyces scabiei 87.22]
gi|260647779|emb|CBG70884.1| NuoH, NADH dehydrogenase subunit [Streptomyces scabiei 87.22]
Length=454
Score = 468 bits (1203), Expect = 1e-129, Method: Compositional matrix adjust.
Identities = 235/409 (58%), Positives = 302/409 (74%), Gaps = 16/409 (3%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV KA+ F FLM+TVL +I+ ERK++ MQLR GPNR GP G LQSLA
Sbjct 11 LSMFGRDPWWLVVVKAVFCFAFLMITVLFSIVWERKVVAWMQLRIGPNRHGPWGMLQSLA 70
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DGIKL LKE + D+ VY +API++ IPAF A A IPFGP E+S+FG RT +Q+T
Sbjct 71 DGIKLMLKEDVIVKRADKVVYVLAPIVAAIPAFMAIAVIPFGPAGNEISIFGQRTTMQLT 130
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLP+A+L++L ++++G+YGIVL GW+SGSTYPLLGG+RS AQ+ISYE+AMG +FA+VFL
Sbjct 131 DLPIAMLYVLAVASVGIYGIVLAGWSSGSTYPLLGGLRSAAQMISYEIAMGAAFASVFLY 190
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+G+MSTS IV AQ WY LL SF+IY+++MVGETNRAPFD+PE+EG+LV GF+TEYS
Sbjct 191 SGSMSTSAIVEAQQDRWYIVLLPVSFLIYIVTMVGETNRAPFDMPESEGDLVGGFNTEYS 250
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFAMFMLAEYVNM TVSA++ TLF GGW APWP++ W AN GWWP++WF KV
Sbjct 251 SIKFAMFMLAEYVNMVTVSAVSVTLFLGGWRAPWPISTFWEGANHGWWPMLWFVVKVQLL 310
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQYWTPTLVFSS 356
LF + WLR TLPR+RYDQ M LGWK+L+PVS+VW+M+ A +R+LRN+ Y + L
Sbjct 311 LFFFIWLRGTLPRVRYDQLMKLGWKVLLPVSVVWLMLVATVRTLRNENYDFAEIAL---- 366
Query 357 IVVAAAMVLLLRKPLSAPGARASARQRGDEGTSP---EP---AFPTPPL 399
VA A+++L + A R R+ D+ P +P FP PPL
Sbjct 367 -YVAGAVIVLFLLSVVADMFR-DRREAQDQPAEPAAFDPMAGGFPVPPL 413
>gi|302521201|ref|ZP_07273543.1| NADH-quinone oxidoreductase H/I [Streptomyces sp. SPB78]
gi|302430096|gb|EFL01912.1| NADH-quinone oxidoreductase H/I [Streptomyces sp. SPB78]
Length=464
Score = 465 bits (1197), Expect = 5e-129, Method: Compositional matrix adjust.
Identities = 223/351 (64%), Positives = 281/351 (81%), Gaps = 4/351 (1%)
Query 1 MTTFGHDTWWLVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLA 60
++ FG D WWLV KA+ F FLM++VL AI+ ERK++G MQLR GPNR GP G LQSLA
Sbjct 21 LSLFGTDPWWLVVVKAVFCFAFLMISVLFAIVWERKVVGWMQLRIGPNRTGPWGMLQSLA 80
Query 61 DGIKLALKESITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGP---EVSVFGHRTPLQIT 117
DG+KL LKE + D+ VY +AP+++ IPAF A A IPFGP E+SVFGHRT +Q+T
Sbjct 81 DGVKLMLKEDLLVKRADKAVYILAPVVAAIPAFMAIAVIPFGPSGNEISVFGHRTAMQLT 140
Query 118 DLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLM 177
DLP+A+L+IL +++G+YGIVL GW+SGSTYPLLGG+RS AQ+ISYE+AMG +FA+VFL
Sbjct 141 DLPIAMLYILATASVGIYGIVLAGWSSGSTYPLLGGLRSCAQMISYEIAMGAAFASVFLY 200
Query 178 AGTMSTSQIVAAQDGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYS 237
+G+MSTS IV AQ+G WY LL SF++Y+++MVGETNRAPFD+PE+EG+LV GF+TEYS
Sbjct 201 SGSMSTSAIVDAQNGRWYIVLLPVSFLLYIVTMVGETNRAPFDMPESEGDLVGGFNTEYS 260
Query 238 SLKFAMFMLAEYVNMTTVSALAATLFFGGWHAPWPLN-MWASANTGWWPLIWFTAKVWGF 296
S+KFAMFMLAEYVNM TVS++AATLF GGW APWP++ W AN GWWPL+W KV
Sbjct 261 SIKFAMFMLAEYVNMVTVSSVAATLFLGGWRAPWPISTFWEGANHGWWPLLWLVVKVQLL 320
Query 297 LFIYFWLRATLPRLRYDQFMALGWKLLIPVSLVWVMVAAIIRSLRNQGYQY 347
LF + WLR +LPR+RYDQ M LGWK+LIPVS+VW+M+ A +R LRN+ Y Y
Sbjct 321 LFFFIWLRGSLPRVRYDQLMKLGWKVLIPVSVVWLMLVATVRVLRNENYDY 371
Lambda K H
0.326 0.139 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 819347350176
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40