BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3156 Length=633 Score E Sequences producing significant alignments: (Bits) Value gi|15610292|ref|NP_217672.1| NADH dehydrogenase subunit L [Mycob... 1245 0.0 gi|31794332|ref|NP_856825.1| NADH dehydrogenase subunit L [Mycob... 1243 0.0 gi|289575868|ref|ZP_06456095.1| NADH dehydrogenase subunit I L n... 1241 0.0 gi|340628132|ref|YP_004746584.1| putative NADH dehydrogenase I s... 1239 0.0 gi|167970175|ref|ZP_02552452.1| NADH dehydrogenase subunit L [My... 1237 0.0 gi|254233774|ref|ZP_04927099.1| NADH dehydrogenase I (chain L) n... 1236 0.0 gi|289746964|ref|ZP_06506342.1| NADH dehydrogenase I [Mycobacter... 1210 0.0 gi|183981487|ref|YP_001849778.1| NADH dehydrogenase I (chain L) ... 1031 0.0 gi|118463741|ref|YP_883196.1| NADH dehydrogenase subunit L [Myco... 1000 0.0 gi|254776466|ref|ZP_05217982.1| NADH dehydrogenase subunit L [My... 1000 0.0 gi|336459335|gb|EGO38278.1| proton-translocating NADH-quinone ox... 995 0.0 gi|254819283|ref|ZP_05224284.1| NADH dehydrogenase subunit L [My... 993 0.0 gi|240169659|ref|ZP_04748318.1| NADH dehydrogenase subunit L [My... 991 0.0 gi|296169179|ref|ZP_06850833.1| NADH-quinone oxidoreductase subu... 987 0.0 gi|342861064|ref|ZP_08717713.1| NADH:ubiquinone oxidoreductase s... 976 0.0 gi|41409310|ref|NP_962146.1| NADH dehydrogenase subunit L [Mycob... 974 0.0 gi|118617957|ref|YP_906289.1| NADH dehydrogenase subunit L [Myco... 974 0.0 gi|118467369|ref|YP_886413.1| NADH dehydrogenase subunit L [Myco... 893 0.0 gi|126434134|ref|YP_001069825.1| NADH dehydrogenase subunit L [M... 881 0.0 gi|108798536|ref|YP_638733.1| NADH dehydrogenase subunit L [Myco... 862 0.0 gi|315445440|ref|YP_004078319.1| NADH dehydrogenase subunit L [M... 860 0.0 gi|145225071|ref|YP_001135749.1| NADH dehydrogenase subunit L [M... 859 0.0 gi|120402872|ref|YP_952701.1| NADH dehydrogenase subunit L [Myco... 843 0.0 gi|226306203|ref|YP_002766163.1| NADH-quinone oxidoreductase cha... 839 0.0 gi|312139319|ref|YP_004006655.1| NADH dehydrogenase (quinone) ch... 836 0.0 gi|333991510|ref|YP_004524124.1| NADH dehydrogenase I (chain L) ... 828 0.0 gi|229490796|ref|ZP_04384631.1| NADH-quinone oxidoreductase subu... 824 0.0 gi|226365391|ref|YP_002783174.1| NADH dehydrogenase subunit L [R... 818 0.0 gi|333922089|ref|YP_004495670.1| NADH-quinone oxidoreductase cha... 810 0.0 gi|54024626|ref|YP_118868.1| NADH dehydrogenase subunit L [Nocar... 809 0.0 gi|325676672|ref|ZP_08156347.1| NADH-quinone oxidoreductase subu... 808 0.0 gi|343926365|ref|ZP_08765870.1| NADH-quinone oxidoreductase chai... 807 0.0 gi|111022883|ref|YP_705855.1| NADH dehydrogenase subunit L [Rhod... 804 0.0 gi|326382752|ref|ZP_08204442.1| NADH:ubiquinone oxidoreductase s... 791 0.0 gi|117927487|ref|YP_872038.1| NADH dehydrogenase subunit L [Acid... 785 0.0 gi|345001418|ref|YP_004804272.1| proton-translocating NADH-quino... 784 0.0 gi|302536179|ref|ZP_07288521.1| NADH-quinone oxidoreductase subu... 784 0.0 gi|320009193|gb|ADW04043.1| proton-translocating NADH-quinone ox... 776 0.0 gi|239989941|ref|ZP_04710605.1| NADH dehydrogenase subunit L [St... 771 0.0 gi|326777361|ref|ZP_08236626.1| proton-translocating NADH-quinon... 769 0.0 gi|182436766|ref|YP_001824485.1| NADH dehydrogenase subunit L [S... 768 0.0 gi|297192776|ref|ZP_06910174.1| NADH dehydrogenase subunit L [St... 767 0.0 gi|262200410|ref|YP_003271618.1| proton-translocating NADH-quino... 766 0.0 gi|169629231|ref|YP_001702880.1| NADH dehydrogenase subunit L [M... 765 0.0 gi|254391148|ref|ZP_05006355.1| NADH-quinone oxidoreductase subu... 756 0.0 gi|328884323|emb|CCA57562.1| NADH-ubiquinone oxidoreductase chai... 753 0.0 gi|29831391|ref|NP_826025.1| NADH dehydrogenase subunit L [Strep... 744 0.0 gi|256396781|ref|YP_003118345.1| NADH dehydrogenase subunit L [C... 743 0.0 gi|296268284|ref|YP_003650916.1| proton-translocating NADH-quino... 743 0.0 gi|269128602|ref|YP_003301972.1| proton-translocating NADH-quino... 740 0.0 >gi|15610292|ref|NP_217672.1| NADH dehydrogenase subunit L [Mycobacterium tuberculosis H37Rv] gi|15842732|ref|NP_337769.1| NADH dehydrogenase subunit L [Mycobacterium tuberculosis CDC1551] gi|121639039|ref|YP_979263.1| NADH dehydrogenase subunit L [Mycobacterium bovis BCG str. Pasteur 1173P2] 45 more sequence titles Length=633 Score = 1245 bits (3221), Expect = 0.0, Method: Compositional matrix adjust. Identities = 632/633 (99%), Positives = 633/633 (100%), Gaps = 0/633 (0%) Query 1 VTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 +TTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR Sbjct 1 MTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 Query 61 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR Sbjct 61 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 Query 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM Sbjct 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 Query 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ Sbjct 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 Query 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI 300 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI Sbjct 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI 300 Query 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH Sbjct 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 Query 361 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS 420 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS Sbjct 361 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS 420 Query 421 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG Sbjct 421 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 Query 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP 540 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP Sbjct 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP 540 Query 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR Sbjct 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 Query 601 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW Sbjct 601 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 >gi|31794332|ref|NP_856825.1| NADH dehydrogenase subunit L [Mycobacterium bovis AF2122/97] gi|31619928|emb|CAD95272.1| PROBABLE NADH DEHYDROGENASE I (CHAIN L) NUOL (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN L) [Mycobacterium bovis AF2122/97] Length=633 Score = 1243 bits (3217), Expect = 0.0, Method: Compositional matrix adjust. Identities = 631/633 (99%), Positives = 633/633 (100%), Gaps = 0/633 (0%) Query 1 VTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 +TTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR Sbjct 1 MTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 Query 61 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR Sbjct 61 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 Query 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM Sbjct 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 Query 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ Sbjct 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 Query 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI 300 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLL+GAI Sbjct 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLYGAI 300 Query 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH Sbjct 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 Query 361 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS 420 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS Sbjct 361 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS 420 Query 421 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG Sbjct 421 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 Query 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP 540 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP Sbjct 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP 540 Query 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR Sbjct 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 Query 601 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW Sbjct 601 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 >gi|289575868|ref|ZP_06456095.1| NADH dehydrogenase subunit I L nuoL [Mycobacterium tuberculosis K85] gi|289540299|gb|EFD44877.1| NADH dehydrogenase subunit I L nuoL [Mycobacterium tuberculosis K85] Length=633 Score = 1241 bits (3210), Expect = 0.0, Method: Compositional matrix adjust. Identities = 631/633 (99%), Positives = 632/633 (99%), Gaps = 0/633 (0%) Query 1 VTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 +TTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR Sbjct 1 MTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 Query 61 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR Sbjct 61 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 Query 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM Sbjct 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 Query 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ Sbjct 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 Query 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI 300 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI Sbjct 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI 300 Query 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH Sbjct 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 Query 361 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS 420 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS Sbjct 361 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS 420 Query 421 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG Sbjct 421 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 Query 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP 540 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAY MYGTAPIPRVAP Sbjct 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYWMYGTAPIPRVAP 540 Query 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR Sbjct 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 Query 601 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW Sbjct 601 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 >gi|340628132|ref|YP_004746584.1| putative NADH dehydrogenase I subunit L NuoL [Mycobacterium canettii CIPT 140010059] gi|340006322|emb|CCC45501.1| putative NADH dehydrogenase I (chain L) NUOL (NADH-ubiquinone oxidoreductase chain L) [Mycobacterium canettii CIPT 140010059] Length=633 Score = 1239 bits (3207), Expect = 0.0, Method: Compositional matrix adjust. Identities = 629/633 (99%), Positives = 632/633 (99%), Gaps = 0/633 (0%) Query 1 VTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 +TTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR Sbjct 1 MTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 Query 61 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 DG+ERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR Sbjct 61 DGVERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 Query 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM Sbjct 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 Query 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ Sbjct 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 Query 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI 300 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPL+NLAPTAQLAVVIVGAVTLLFGAI Sbjct 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLFNLAPTAQLAVVIVGAVTLLFGAI 300 Query 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH Sbjct 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 Query 361 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS 420 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS Sbjct 361 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS 420 Query 421 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG Sbjct 421 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 Query 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP 540 LLAVGGTLRHWLQPVVGSHEEATHALPTW ATTLALGVVAVGIAVAYRMYGTAPIPRVAP Sbjct 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWFATTLALGVVAVGIAVAYRMYGTAPIPRVAP 540 Query 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR Sbjct 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 Query 601 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW Sbjct 601 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 >gi|167970175|ref|ZP_02552452.1| NADH dehydrogenase subunit L [Mycobacterium tuberculosis H37Ra] gi|254552246|ref|ZP_05142693.1| NADH dehydrogenase subunit L [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|294995507|ref|ZP_06801198.1| NADH dehydrogenase subunit L [Mycobacterium tuberculosis 210] 23 more sequence titles Length=629 Score = 1237 bits (3200), Expect = 0.0, Method: Compositional matrix adjust. Identities = 628/629 (99%), Positives = 629/629 (100%), Gaps = 0/629 (0%) Query 5 LGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLE 64 +GTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLE Sbjct 1 MGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLE 60 Query 65 RAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFF 124 RAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFF Sbjct 61 RAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFF 120 Query 125 GYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVG 184 GYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVG Sbjct 121 GYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVG 180 Query 185 DAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLG 244 DAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLG Sbjct 181 DAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLG 240 Query 245 DAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCA 304 DAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCA Sbjct 241 DAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCA 300 Query 305 KDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHE 364 KDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHE Sbjct 301 KDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHE 360 Query 365 EQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGG 424 EQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGG Sbjct 361 EQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGG 420 Query 425 AALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAV 484 AALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAV Sbjct 421 AALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAV 480 Query 485 GGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVS 544 GGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVS Sbjct 481 GGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVS 540 Query 545 ALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQM 604 ALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQM Sbjct 541 ALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQM 600 Query 605 QTGFARNYALSMLVGAVLVAAALLVVQLW 633 QTGFARNYALSMLVGAVLVAAALLVVQLW Sbjct 601 QTGFARNYALSMLVGAVLVAAALLVVQLW 629 >gi|254233774|ref|ZP_04927099.1| NADH dehydrogenase I (chain L) nuoL (NADH-ubiquinone oxidoreductase chain L) [Mycobacterium tuberculosis C] gi|124599303|gb|EAY58407.1| NADH dehydrogenase I (chain L) nuoL (NADH-ubiquinone oxidoreductase chain L) [Mycobacterium tuberculosis C] Length=633 Score = 1236 bits (3197), Expect = 0.0, Method: Compositional matrix adjust. Identities = 627/633 (99%), Positives = 630/633 (99%), Gaps = 0/633 (0%) Query 1 VTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 +TTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR Sbjct 1 MTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 Query 61 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR Sbjct 61 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 Query 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM Sbjct 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 Query 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ Sbjct 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 Query 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI 300 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI Sbjct 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI 300 Query 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH Sbjct 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 Query 361 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS 420 AMHEEQDMRRYGG+RAALPVT+ATF LAYLAIIGVPPFAGFFSKDAIIE ALGAGGIRGS Sbjct 361 AMHEEQDMRRYGGIRAALPVTYATFDLAYLAIIGVPPFAGFFSKDAIIEDALGAGGIRGS 420 Query 421 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 LLGGAALL AGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG Sbjct 421 LLGGAALLSAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 Query 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP 540 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP Sbjct 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP 540 Query 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR Sbjct 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 Query 601 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW Sbjct 601 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 >gi|289746964|ref|ZP_06506342.1| NADH dehydrogenase I [Mycobacterium tuberculosis 02_1987] gi|289687492|gb|EFD54980.1| NADH dehydrogenase I [Mycobacterium tuberculosis 02_1987] Length=734 Score = 1210 bits (3130), Expect = 0.0, Method: Compositional matrix adjust. Identities = 613/613 (100%), Positives = 613/613 (100%), Gaps = 0/613 (0%) Query 21 AAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQVFTWIPAGGL 80 AAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQVFTWIPAGGL Sbjct 122 AAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQVFTWIPAGGL 181 Query 81 QVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFLASMLLLVVA 140 QVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFLASMLLLVVA Sbjct 182 QVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFLASMLLLVVA 241 Query 141 DNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVGMFLTFSTFG 200 DNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVGMFLTFSTFG Sbjct 242 DNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVGMFLTFSTFG 301 Query 201 TLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPTPVSALIHAA 260 TLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPTPVSALIHAA Sbjct 302 TLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPTPVSALIHAA 361 Query 261 TMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRALAASTISQI 320 TMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRALAASTISQI Sbjct 362 TMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRALAASTISQI 421 Query 321 GYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRYGGLRAALPV 380 GYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRYGGLRAALPV Sbjct 422 GYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRYGGLRAALPV 481 Query 381 TFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAGVTAFYMTRV 440 TFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAGVTAFYMTRV Sbjct 482 TFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAGVTAFYMTRV 541 Query 441 MLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLRHWLQPVVGSHE 500 MLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLRHWLQPVVGSHE Sbjct 542 MLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLRHWLQPVVGSHE 601 Query 501 EATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAAARADLYGDAFN 560 EATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAAARADLYGDAFN Sbjct 602 EATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAAARADLYGDAFN 661 Query 561 EEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFARNYALSMLVGA 620 EEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFARNYALSMLVGA Sbjct 662 EEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFARNYALSMLVGA 721 Query 621 VLVAAALLVVQLW 633 VLVAAALLVVQLW Sbjct 722 VLVAAALLVVQLW 734 >gi|183981487|ref|YP_001849778.1| NADH dehydrogenase I (chain L) NuoL (NADH- ubiquinone oxidoreductase chain L) [Mycobacterium marinum M] gi|183174813|gb|ACC39923.1| NADH dehydrogenase I (chain L) NuoL (NADH- ubiquinone oxidoreductase chain L) [Mycobacterium marinum M] Length=633 Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 549/616 (90%), Positives = 579/616 (94%), Gaps = 0/616 (0%) Query 1 VTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 +T LGT +TWLLVALPLAGAAILLFGGRRTDAWGH LGCAAALA+FGVGA +LAD++GR Sbjct 1 MTNFLGTQHTWLLVALPLAGAAILLFGGRRTDAWGHWLGCAAALASFGVGATMLADLVGR 60 Query 61 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 +R IHQ VFTW+P LQVDFGLQIDQLS+CFVLLI+GVGSLIHIYSV YMAEDPDR Sbjct 61 SADDRLIHQTVFTWMPVSQLQVDFGLQIDQLSICFVLLITGVGSLIHIYSVAYMAEDPDR 120 Query 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM Sbjct 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 Query 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 NRVGDAGLA+GMF+ FSTFGTLSYAGVFAG PAASR LTA+GLL+LLGACAKSAQVPLQ Sbjct 181 NRVGDAGLALGMFVMFSTFGTLSYAGVFAGAPAASRGALTAMGLLLLLGACAKSAQVPLQ 240 Query 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI 300 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRS PLYNLAP AQLAVV+VG VTLL GA+ Sbjct 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSNPLYNLAPDAQLAVVVVGTVTLLLGAV 300 Query 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 IGCAKDDIKRALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSG+VIH Sbjct 301 IGCAKDDIKRALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGSVIH 360 Query 361 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS 420 AMHEEQDMRRYGGLRAALPVTF TFGL YLAIIGVPPFAGFFSKDAIIEAALGAG RG Sbjct 361 AMHEEQDMRRYGGLRAALPVTFVTFGLGYLAIIGVPPFAGFFSKDAIIEAALGAGDTRGY 420 Query 421 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 +LGGAALLGAGVTAFYMTRVMLMTFFGEKRW PGAHPHEAPA+MTWPMILLA GSVFSGG Sbjct 421 VLGGAALLGAGVTAFYMTRVMLMTFFGEKRWAPGAHPHEAPALMTWPMILLAFGSVFSGG 480 Query 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP 540 LLA+GGTL+ WL+PVVG+HEEATHALPTWV+TT+ALGVVAVGIAVAYRMYGTA IPRVAP Sbjct 481 LLAMGGTLQRWLEPVVGAHEEATHALPTWVSTTVALGVVAVGIAVAYRMYGTAAIPRVAP 540 Query 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 VRVS LT AARAD+Y DAFNEEVFMRPGAQLT+AVV VD+AGVDGSVNALA LVS TSNR Sbjct 541 VRVSVLTTAARADMYADAFNEEVFMRPGAQLTDAVVEVDNAGVDGSVNALAGLVSMTSNR 600 Query 601 LRQMQTGFARNYALSM 616 LR+MQTGFARNYALSM Sbjct 601 LRRMQTGFARNYALSM 616 >gi|118463741|ref|YP_883196.1| NADH dehydrogenase subunit L [Mycobacterium avium 104] gi|118165028|gb|ABK65925.1| NADH-quinone oxidoreductase chain l [Mycobacterium avium 104] Length=640 Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust. Identities = 543/627 (87%), Positives = 575/627 (92%), Gaps = 0/627 (0%) Query 7 THYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERA 66 THYT LLVALPLAGAAILLFGGRRTD WGH LGCA A+AAF VG LL ++LGR +RA Sbjct 14 THYTPLLVALPLAGAAILLFGGRRTDRWGHWLGCATAVAAFVVGVGLLDELLGRPADQRA 73 Query 67 IHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGY 126 IH++VF+WIP G LQVD GLQIDQLS+CFVLLI+GVGSLIHIYSV YMAED DRRRFFGY Sbjct 74 IHERVFSWIPVGQLQVDLGLQIDQLSVCFVLLITGVGSLIHIYSVAYMAEDADRRRFFGY 133 Query 127 LNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDA 186 LNLFLASMLLLV+ADNYV+LYVGWEGVGLASYLLIGFWYHKP+AATAAKKAFVMNRVGDA Sbjct 134 LNLFLASMLLLVIADNYVVLYVGWEGVGLASYLLIGFWYHKPTAATAAKKAFVMNRVGDA 193 Query 187 GLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDA 246 GLA+GMFL FSTFGTLSYAGVFAG PAA R LTA+GLL+LLGACAKSAQVPLQAWLGDA Sbjct 194 GLALGMFLMFSTFGTLSYAGVFAGAPAAGRGALTAMGLLLLLGACAKSAQVPLQAWLGDA 253 Query 247 MEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKD 306 MEGPTPVSALIHAATMVTAGVYLIVRS PLYNL+P AQLAVVIVGAVTLL GA IGCAKD Sbjct 254 MEGPTPVSALIHAATMVTAGVYLIVRSNPLYNLSPDAQLAVVIVGAVTLLLGAFIGCAKD 313 Query 307 DIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 366 DIKRALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ Sbjct 314 DIKRALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 373 Query 367 DMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAA 426 DMRRYGGLRAALPVTF TFGL YLAIIGVPPFAGFFSKDAIIEAAL AGG+RG LLGGAA Sbjct 374 DMRRYGGLRAALPVTFVTFGLGYLAIIGVPPFAGFFSKDAIIEAALAAGGVRGYLLGGAA 433 Query 427 LLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 LLGAGVTAFYMTRVMLMTFFGEKRW PG+HPHEAP +MTWPMILLAVGSVFSGGL AVGG Sbjct 434 LLGAGVTAFYMTRVMLMTFFGEKRWAPGSHPHEAPGLMTWPMILLAVGSVFSGGLFAVGG 493 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSAL 546 TL+ WL+PVVG HEE THA+P W++T LALGVVAVGIAVAYR+Y TAPIPRVAP+ VS L Sbjct 494 TLQRWLEPVVGRHEEVTHAVPVWISTALALGVVAVGIAVAYRLYATAPIPRVAPLSVSPL 553 Query 547 TAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQT 606 T A R D YGDAFNEEVFMRPGAQLT+A+V VDDAGVDGSVNALA LVS TSNRLR +QT Sbjct 554 TTAVRNDFYGDAFNEEVFMRPGAQLTHALVEVDDAGVDGSVNALAALVSATSNRLRGLQT 613 Query 607 GFARNYALSMLVGAVLVAAALLVVQLW 633 GFARNYALSML GAVLV A +L V+LW Sbjct 614 GFARNYALSMLTGAVLVIALILAVRLW 640 >gi|254776466|ref|ZP_05217982.1| NADH dehydrogenase subunit L [Mycobacterium avium subsp. avium ATCC 25291] Length=628 Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust. Identities = 543/627 (87%), Positives = 575/627 (92%), Gaps = 0/627 (0%) Query 7 THYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERA 66 THYT LLVALPLAGAAILLFGGRRTD WGH LGCA A+AAF VG LL ++LGR +RA Sbjct 2 THYTPLLVALPLAGAAILLFGGRRTDRWGHWLGCATAVAAFVVGVGLLDELLGRPADQRA 61 Query 67 IHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGY 126 IH++VF+WIP G LQVD GLQIDQLS+CFVLLI+GVGSLIHIYSV YMAED DRRRFFGY Sbjct 62 IHERVFSWIPVGQLQVDLGLQIDQLSVCFVLLITGVGSLIHIYSVAYMAEDADRRRFFGY 121 Query 127 LNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDA 186 LNLFLASMLLLV+ADNYV+LYVGWEGVGLASYLLIGFWYHKP+AATAAKKAFVMNRVGDA Sbjct 122 LNLFLASMLLLVIADNYVVLYVGWEGVGLASYLLIGFWYHKPTAATAAKKAFVMNRVGDA 181 Query 187 GLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDA 246 GLA+GMFL FSTFGTLSYAGVFAG PAA R LTA+GLL+LLGACAKSAQVPLQAWLGDA Sbjct 182 GLALGMFLMFSTFGTLSYAGVFAGAPAAGRGALTAMGLLLLLGACAKSAQVPLQAWLGDA 241 Query 247 MEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKD 306 MEGPTPVSALIHAATMVTAGVYLIVRS PLYNL+P AQLAVVIVGAVTLL GA IGCAKD Sbjct 242 MEGPTPVSALIHAATMVTAGVYLIVRSNPLYNLSPDAQLAVVIVGAVTLLLGAFIGCAKD 301 Query 307 DIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 366 DIKRALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ Sbjct 302 DIKRALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 361 Query 367 DMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAA 426 DMRRYGGLRAALPVTF TFGL YLAIIGVPPFAGFFSKDAIIEAAL AGG+RG LLGGAA Sbjct 362 DMRRYGGLRAALPVTFVTFGLGYLAIIGVPPFAGFFSKDAIIEAALAAGGVRGYLLGGAA 421 Query 427 LLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 LLGAGVTAFYMTRVMLMTFFGEKRW PG+HPHEAP +MTWPMILLAVGSVFSGGL AVGG Sbjct 422 LLGAGVTAFYMTRVMLMTFFGEKRWAPGSHPHEAPGLMTWPMILLAVGSVFSGGLFAVGG 481 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSAL 546 TL+ WL+PVVG HEE THA+P W++T LALGVVAVGIAVAYR+Y TAPIPRVAP+ VS L Sbjct 482 TLQRWLEPVVGRHEEVTHAVPVWISTALALGVVAVGIAVAYRLYATAPIPRVAPLSVSPL 541 Query 547 TAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQT 606 T A R D YGDAFNEEVFMRPGAQLT+A+V VDDAGVDGSVNALA LVS TSNRLR +QT Sbjct 542 TTAVRNDFYGDAFNEEVFMRPGAQLTHALVEVDDAGVDGSVNALAALVSATSNRLRGLQT 601 Query 607 GFARNYALSMLVGAVLVAAALLVVQLW 633 GFARNYALSML GAVLV A +L V+LW Sbjct 602 GFARNYALSMLTGAVLVIALILAVRLW 628 >gi|336459335|gb|EGO38278.1| proton-translocating NADH-quinone oxidoreductase, chain L [Mycobacterium avium subsp. paratuberculosis S397] Length=628 Score = 995 bits (2573), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/627 (86%), Positives = 574/627 (92%), Gaps = 0/627 (0%) Query 7 THYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERA 66 THYT LLVALPLAGAAILLFGGRRTD WGH LGCA A+AAF VG LL ++LGR +RA Sbjct 2 THYTPLLVALPLAGAAILLFGGRRTDRWGHWLGCATAVAAFVVGVGLLDELLGRPADQRA 61 Query 67 IHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGY 126 IH++VF+WI G LQVD GLQIDQLS+CFVLLI+GVGSLIHIYSV YMAED DRRRFFGY Sbjct 62 IHERVFSWIQVGQLQVDLGLQIDQLSVCFVLLITGVGSLIHIYSVAYMAEDADRRRFFGY 121 Query 127 LNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDA 186 LNLFLASMLLLV+ADNYV+LYVGWEGVGLASYLLIGFWYHKP+AATAAKKAFVMNRVGDA Sbjct 122 LNLFLASMLLLVIADNYVVLYVGWEGVGLASYLLIGFWYHKPTAATAAKKAFVMNRVGDA 181 Query 187 GLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDA 246 GLA+GMFL FSTFGTLSYAGVFAG PAA R LTA+GLL+LLGACAKSAQVPL+AWLGDA Sbjct 182 GLALGMFLMFSTFGTLSYAGVFAGAPAAGRGALTAMGLLLLLGACAKSAQVPLKAWLGDA 241 Query 247 MEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKD 306 MEGPTPVSALIHAATMVTAGVYLIVRS PLYNL+P AQLAVVIVGAVTLL GA IGCAKD Sbjct 242 MEGPTPVSALIHAATMVTAGVYLIVRSNPLYNLSPDAQLAVVIVGAVTLLLGAFIGCAKD 301 Query 307 DIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 366 DIKRALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ Sbjct 302 DIKRALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 361 Query 367 DMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAA 426 DMRRYGGLRAALPVTF TFGL YLAIIGVPPFAGFFSKDAIIEAAL AGG+RG LLGGAA Sbjct 362 DMRRYGGLRAALPVTFVTFGLGYLAIIGVPPFAGFFSKDAIIEAALAAGGVRGYLLGGAA 421 Query 427 LLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 LLGAGVTAFYMTRVMLMTFFGEKRW PG+HPHEAP +MTWPMILLA+GSVFSGGL AVGG Sbjct 422 LLGAGVTAFYMTRVMLMTFFGEKRWAPGSHPHEAPGLMTWPMILLAIGSVFSGGLFAVGG 481 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSAL 546 TL+ WL+PVVG HEE THA+P W++T LALGVVA+GIAVAYR+Y TAPIPRVAP+ VS L Sbjct 482 TLQRWLEPVVGRHEEVTHAVPVWISTALALGVVAIGIAVAYRLYATAPIPRVAPLSVSPL 541 Query 547 TAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQT 606 T A R D YGDAFNEEVFMRPGAQLT+A+V VDDAGVDGSVNALA LVS TSNRLR +QT Sbjct 542 TTAVRNDFYGDAFNEEVFMRPGAQLTHALVEVDDAGVDGSVNALAALVSATSNRLRGLQT 601 Query 607 GFARNYALSMLVGAVLVAAALLVVQLW 633 GFARNYALSML GAVLV A +L V+LW Sbjct 602 GFARNYALSMLTGAVLVIALILAVRLW 628 >gi|254819283|ref|ZP_05224284.1| NADH dehydrogenase subunit L [Mycobacterium intracellulare ATCC 13950] Length=633 Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/633 (86%), Positives = 577/633 (92%), Gaps = 0/633 (0%) Query 1 VTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 +T +GT Y+WLLVALPLAGA ILLFGGRRTD WGH LGCA ALAAF +G LL ++LGR Sbjct 1 MTNLIGTQYSWLLVALPLAGATILLFGGRRTDRWGHWLGCATALAAFALGLSLLGELLGR 60 Query 61 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 +R IHQ+VF+WIP G LQVD GLQIDQLS+CFVLLISGVGSLIHIYSV YMAEDPDR Sbjct 61 PADDRVIHQKVFSWIPVGQLQVDLGLQIDQLSVCFVLLISGVGSLIHIYSVAYMAEDPDR 120 Query 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 RRFFGYLNLFLASMLLLVVADNYV+LYVGWEGVGLASYLLIGFWYHKP+AATAAKKAFVM Sbjct 121 RRFFGYLNLFLASMLLLVVADNYVVLYVGWEGVGLASYLLIGFWYHKPTAATAAKKAFVM 180 Query 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 NRVGDAGLA+GMFL FSTFGTLSYAGVFAG PAA R LTA+GLL+LLGACAKSAQVPLQ Sbjct 181 NRVGDAGLALGMFLMFSTFGTLSYAGVFAGAPAAGRGALTAMGLLLLLGACAKSAQVPLQ 240 Query 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI 300 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRS PLYNL+P AQLAVV+VGAVTLL GA Sbjct 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSNPLYNLSPDAQLAVVVVGAVTLLLGAF 300 Query 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 IGCAKDDIKRALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH Sbjct 301 IGCAKDDIKRALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 Query 361 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS 420 AM EEQDMRRYGGLRAALP+TFATFGL YLAIIGVPPFAG+FSKDAIIEAAL AGG+RG Sbjct 361 AMDEEQDMRRYGGLRAALPITFATFGLGYLAIIGVPPFAGYFSKDAIIEAALAAGGVRGY 420 Query 421 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 +LGGAALLGAGVTAFYMTRVMLMTFFG+KRW PGAHPHEAP +MTWPMILLA+GSVFSGG Sbjct 421 VLGGAALLGAGVTAFYMTRVMLMTFFGKKRWAPGAHPHEAPGLMTWPMILLAIGSVFSGG 480 Query 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP 540 LLAVGGTL WL+PVVG HEE THA P WV++ LALGVVA+GIAVAYR+Y TA IPRVAP Sbjct 481 LLAVGGTLARWLEPVVGKHEEVTHAFPVWVSSALALGVVAIGIAVAYRLYATADIPRVAP 540 Query 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 + VSALT A R D YGDA NEEVFMRPGAQLT+A+V VD+AGVDGSVNALA LVSQTSNR Sbjct 541 LSVSALTTAVRKDFYGDALNEEVFMRPGAQLTHALVEVDNAGVDGSVNALAALVSQTSNR 600 Query 601 LRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 LR +QTGFARNYALSML GAVLV A +L V+LW Sbjct 601 LRGLQTGFARNYALSMLTGAVLVVALILAVKLW 633 >gi|240169659|ref|ZP_04748318.1| NADH dehydrogenase subunit L [Mycobacterium kansasii ATCC 12478] Length=628 Score = 991 bits (2563), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/610 (89%), Positives = 568/610 (94%), Gaps = 0/610 (0%) Query 7 THYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERA 66 T YTWLLVALPL GAAILLFGGRRTDAWGH LGCAAA+AAFGVGA LLA+MLGR +R Sbjct 2 TDYTWLLVALPLVGAAILLFGGRRTDAWGHWLGCAAAVAAFGVGAALLAEMLGRAEGDRV 61 Query 67 IHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGY 126 I Q VFTWIP GGLQVDFGLQ+DQLSMCFVLLI+GVGSLIHIYSV YM +DPDRRRFFGY Sbjct 62 IRQTVFTWIPVGGLQVDFGLQLDQLSMCFVLLITGVGSLIHIYSVAYMKDDPDRRRFFGY 121 Query 127 LNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDA 186 LNLFLASMLLLVVADNY LLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDA Sbjct 122 LNLFLASMLLLVVADNYALLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDA 181 Query 187 GLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDA 246 GLA+GMF+ F+TFGTLSYAGVFAG PAASR LTA+GLL+LLGACAKSAQVPLQAWLGDA Sbjct 182 GLALGMFVMFATFGTLSYAGVFAGAPAASRGALTAMGLLLLLGACAKSAQVPLQAWLGDA 241 Query 247 MEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKD 306 MEGPTPVSALIHAATMVTAGVYLIVRS PLYNL+P AQLAVV+VGAVTLLFGA IGCAKD Sbjct 242 MEGPTPVSALIHAATMVTAGVYLIVRSNPLYNLSPEAQLAVVVVGAVTLLFGAFIGCAKD 301 Query 307 DIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 366 DIKRALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAM EEQ Sbjct 302 DIKRALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMDEEQ 361 Query 367 DMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAA 426 DMRRYGGLRAALPVTF TFGLAYLAIIGVPPFAGFFSKDAIIEAALG GG RG +LGGAA Sbjct 362 DMRRYGGLRAALPVTFVTFGLAYLAIIGVPPFAGFFSKDAIIEAALGVGGARGYVLGGAA 421 Query 427 LLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 LLGAGVTAFYMTRVMLMTFFG+KRW PG+HPHEAP +MTWPMILLAVGSVFSGGL AVGG Sbjct 422 LLGAGVTAFYMTRVMLMTFFGKKRWAPGSHPHEAPGLMTWPMILLAVGSVFSGGLFAVGG 481 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSAL 546 TLRHWL+PVVG EEATHA+P WV+TT+AL VVA GIAVAYRMY TAP+PRVAP +VS L Sbjct 482 TLRHWLEPVVGVPEEATHAIPAWVSTTVALAVVAAGIAVAYRMYATAPVPRVAPTQVSVL 541 Query 547 TAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQT 606 T AARADLYGDAFNEEVFMRP A+LT+ +V VD+AGVDGSVNALA LVS+TSNRLR+MQT Sbjct 542 TTAARADLYGDAFNEEVFMRPSARLTDTLVEVDNAGVDGSVNALAALVSRTSNRLRRMQT 601 Query 607 GFARNYALSM 616 GFARNYALSM Sbjct 602 GFARNYALSM 611 >gi|296169179|ref|ZP_06850833.1| NADH-quinone oxidoreductase subunit L [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896158|gb|EFG75824.1| NADH-quinone oxidoreductase subunit L [Mycobacterium parascrofulaceum ATCC BAA-614] Length=628 Score = 987 bits (2551), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/627 (87%), Positives = 573/627 (92%), Gaps = 0/627 (0%) Query 7 THYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERA 66 THYTWLLVALPLAGAAILLFGGRRTDAWGH LGCAAALAAFGVG LL+++LGR +R Sbjct 2 THYTWLLVALPLAGAAILLFGGRRTDAWGHWLGCAAALAAFGVGLSLLSELLGRGADDRV 61 Query 67 IHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGY 126 IHQ++F+WIP G LQVD GLQIDQLS+CFVLLISGVGSLIHIYSV YMA+DPDRRRFFGY Sbjct 62 IHQRMFSWIPVGQLQVDLGLQIDQLSVCFVLLISGVGSLIHIYSVAYMADDPDRRRFFGY 121 Query 127 LNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDA 186 LNLFLASMLLLVVADNYV+LYVGWEGVGLASYLLIGFWYHKP+AATAAKKAFVMNRVGDA Sbjct 122 LNLFLASMLLLVVADNYVVLYVGWEGVGLASYLLIGFWYHKPTAATAAKKAFVMNRVGDA 181 Query 187 GLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDA 246 GLA+GMFL FSTFGTLSYAGVFAG P A R LTA+GLL+LLGACAKSAQVPLQAWLGDA Sbjct 182 GLALGMFLMFSTFGTLSYAGVFAGAPGAGRGALTAMGLLLLLGACAKSAQVPLQAWLGDA 241 Query 247 MEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKD 306 MEGPTPVSALIHAATMVTAGVYLIVRS PLYNLAP AQ AVV VGAVTLL GA IGCAKD Sbjct 242 MEGPTPVSALIHAATMVTAGVYLIVRSNPLYNLAPDAQTAVVAVGAVTLLLGAFIGCAKD 301 Query 307 DIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 366 DIKRALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ Sbjct 302 DIKRALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 361 Query 367 DMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAA 426 DMRRYGGLRAALP+TFATFGL YLAIIGVPPFAGFFSKDAI+EAALGAG RG +LGGAA Sbjct 362 DMRRYGGLRAALPITFATFGLGYLAIIGVPPFAGFFSKDAIVEAALGAGDARGYVLGGAA 421 Query 427 LLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 LLGAGVTAFYMTRVMLMTFFGEKRW PG+HPHEAPA+MTWPMILLAVGSVFSGGLLA G Sbjct 422 LLGAGVTAFYMTRVMLMTFFGEKRWAPGSHPHEAPALMTWPMILLAVGSVFSGGLLAWRG 481 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSAL 546 TL+ WL+PVVG HEE THA P WV+T LALGVVA+GIAVAYR+Y A IPRVAP+ VS + Sbjct 482 TLQRWLEPVVGKHEEVTHAFPAWVSTALALGVVAIGIAVAYRLYANAKIPRVAPLAVSPV 541 Query 547 TAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQT 606 T AAR D YGDAFNEEVFMRPGA+LT A+V VD+AGVDGSVNALA LVS TSNRLR +QT Sbjct 542 TTAARRDFYGDAFNEEVFMRPGAELTQALVDVDNAGVDGSVNALAALVSWTSNRLRGLQT 601 Query 607 GFARNYALSMLVGAVLVAAALLVVQLW 633 GFARNYALSML GA LV A +L V+LW Sbjct 602 GFARNYALSMLTGAALVVALILAVKLW 628 >gi|342861064|ref|ZP_08717713.1| NADH:ubiquinone oxidoreductase subunit L [Mycobacterium colombiense CECT 3035] gi|342131508|gb|EGT84778.1| NADH:ubiquinone oxidoreductase subunit L [Mycobacterium colombiense CECT 3035] Length=628 Score = 976 bits (2524), Expect = 0.0, Method: Compositional matrix adjust. Identities = 537/627 (86%), Positives = 573/627 (92%), Gaps = 0/627 (0%) Query 7 THYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERA 66 T TWLLVALPLAGAAILLFGGRRTD WGH LGCA ALAAFGVG LL+++LGR G +R Sbjct 2 TQNTWLLVALPLAGAAILLFGGRRTDRWGHWLGCATALAAFGVGLSLLSELLGRAGDDRF 61 Query 67 IHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGY 126 IHQ+VF+WIP G LQVD GLQIDQLS+CFVLLI+GVGSLIHIYSV YMAED DRRRFFGY Sbjct 62 IHQKVFSWIPVGQLQVDLGLQIDQLSVCFVLLITGVGSLIHIYSVAYMAEDVDRRRFFGY 121 Query 127 LNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDA 186 LNLFLASMLLLV+ADNYV+LYVGWEGVGLASYLLIGFWYHKP+AATAAKKAFVMNRVGDA Sbjct 122 LNLFLASMLLLVIADNYVVLYVGWEGVGLASYLLIGFWYHKPTAATAAKKAFVMNRVGDA 181 Query 187 GLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDA 246 GLA+GMFL FSTFGTLSYAGVFAG PAA LTA+GLL+LLGACAKSAQVPLQAWLGDA Sbjct 182 GLALGMFLMFSTFGTLSYAGVFAGAPAAGHGALTAMGLLLLLGACAKSAQVPLQAWLGDA 241 Query 247 MEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKD 306 MEGPTPVSALIHAATMVTAGVYLIVRS PLYNL+P A+LAVVIVGAVTLL GA IGCAKD Sbjct 242 MEGPTPVSALIHAATMVTAGVYLIVRSNPLYNLSPEARLAVVIVGAVTLLLGAFIGCAKD 301 Query 307 DIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 366 DIKRALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ Sbjct 302 DIKRALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 361 Query 367 DMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAA 426 DMRRYGGLRAALP+TF TFGL YLAIIGVPPFAG+FSKDAIIEAAL +GG++G LLGGAA Sbjct 362 DMRRYGGLRAALPITFVTFGLGYLAIIGVPPFAGYFSKDAIIEAALASGGLQGYLLGGAA 421 Query 427 LLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 LLGAGVTAFYMTRVMLMTFFG+KRW PGAHPHEAP +MTWPMILLAVGSVFSGGLLAVGG Sbjct 422 LLGAGVTAFYMTRVMLMTFFGKKRWAPGAHPHEAPGLMTWPMILLAVGSVFSGGLLAVGG 481 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSAL 546 TL+ WL+PVVG HEE THA P WV++ LALGVV +GIAVAYR+Y T PIPRVAP+ VSAL Sbjct 482 TLQRWLEPVVGKHEEVTHAFPVWVSSALALGVVVIGIAVAYRLYATRPIPRVAPLSVSAL 541 Query 547 TAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQT 606 T A R D YGDAFNEEVFMRPGAQLT A+V VD+AGVDGSVNALA LVS TSNRLR +QT Sbjct 542 TTAVRKDFYGDAFNEEVFMRPGAQLTRALVDVDNAGVDGSVNALAALVSSTSNRLRGLQT 601 Query 607 GFARNYALSMLVGAVLVAAALLVVQLW 633 GFARNYALSML GAVLV A +L V+LW Sbjct 602 GFARNYALSMLTGAVLVVALILAVRLW 628 >gi|41409310|ref|NP_962146.1| NADH dehydrogenase subunit L [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398130|gb|AAS05760.1| NuoL [Mycobacterium avium subsp. paratuberculosis K-10] Length=628 Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/627 (86%), Positives = 572/627 (92%), Gaps = 0/627 (0%) Query 7 THYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERA 66 THYT LLVALPLAGAAILLFGGRRTD WGH LGCA A+AAF VG LL ++LGR +RA Sbjct 2 THYTPLLVALPLAGAAILLFGGRRTDRWGHWLGCATAVAAFVVGVGLLDELLGRPADQRA 61 Query 67 IHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGY 126 IH++VF+WI G LQVD GLQIDQLS+CFVLLI+GVGSLIHIYSV YMAED DRRRFFGY Sbjct 62 IHERVFSWIQVGQLQVDLGLQIDQLSVCFVLLITGVGSLIHIYSVAYMAEDADRRRFFGY 121 Query 127 LNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDA 186 LNLFLASMLLLV+ADNYV+LYVGWEGVGLASYLLIGFWYHKP+AATAAKKAFVMNRVGDA Sbjct 122 LNLFLASMLLLVIADNYVVLYVGWEGVGLASYLLIGFWYHKPTAATAAKKAFVMNRVGDA 181 Query 187 GLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDA 246 GLA+GMFL FSTFGTLSYAGVFAG PAA R LTA+GLL+LLGACAKSAQVPLQAWLGDA Sbjct 182 GLALGMFLMFSTFGTLSYAGVFAGAPAAGRGALTAMGLLLLLGACAKSAQVPLQAWLGDA 241 Query 247 MEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKD 306 MEGPTPVSALIHAATMVTAGVYLIVRS PLYNL+P AQLAVVIVGAVTLL GA IGCAKD Sbjct 242 MEGPTPVSALIHAATMVTAGVYLIVRSNPLYNLSPDAQLAVVIVGAVTLLLGAFIGCAKD 301 Query 307 DIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 366 DIKRALAAST+SQIGYMVLAAGLGP GYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ Sbjct 302 DIKRALAASTMSQIGYMVLAAGLGPTGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 361 Query 367 DMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAA 426 DMRRYGGLRAALPVTF TFGL YLAIIGVPPFAGFFSKDAIIEAAL AGG RG LLGGAA Sbjct 362 DMRRYGGLRAALPVTFVTFGLGYLAIIGVPPFAGFFSKDAIIEAALAAGGGRGYLLGGAA 421 Query 427 LLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 LLGAGVTAFYMTRVMLMTFFGEKRW PG+HPHEAP +MTWPMILLA+GS+FSGGL AVGG Sbjct 422 LLGAGVTAFYMTRVMLMTFFGEKRWAPGSHPHEAPGLMTWPMILLAIGSLFSGGLFAVGG 481 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSAL 546 TL+ WL+PVVG HEE THA+P W++T LALGVVA+GIAVAYR+Y TAPIPRVAP+ VS L Sbjct 482 TLQRWLEPVVGRHEEVTHAVPVWISTALALGVVAIGIAVAYRLYATAPIPRVAPLSVSPL 541 Query 547 TAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQT 606 T A R D YGDAFNEEVFMRPGAQLT+A+V VDDAGVDGSVNALA LVS TSNRLR +QT Sbjct 542 TTAVRNDFYGDAFNEEVFMRPGAQLTHALVEVDDAGVDGSVNALAALVSATSNRLRGLQT 601 Query 607 GFARNYALSMLVGAVLVAAALLVVQLW 633 GFARNYALSML GAVLV A +L V+LW Sbjct 602 GFARNYALSMLTGAVLVIALILAVRLW 628 >gi|118617957|ref|YP_906289.1| NADH dehydrogenase subunit L [Mycobacterium ulcerans Agy99] gi|118570067|gb|ABL04818.1| NADH dehydrogenase I (chain L) NuoL (NADH- ubiquinone oxidoreductase chain L) [Mycobacterium ulcerans Agy99] Length=633 Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust. Identities = 543/616 (89%), Positives = 573/616 (94%), Gaps = 0/616 (0%) Query 1 VTTSLGTHYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGR 60 +T LGT +TWLLVALPLAGAAILLFGGRRTDAWGH LGCAAALA+FGVGA +LAD++GR Sbjct 1 MTNFLGTQHTWLLVALPLAGAAILLFGGRRTDAWGHWLGCAAALASFGVGATMLADLVGR 60 Query 61 DGLERAIHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDR 120 +R IHQ VFTW+P LQVDFGLQIDQLS+CFVLLI+GVGSLIHIYSV YMAEDPDR Sbjct 61 SADDRLIHQTVFTWMPVSQLQVDFGLQIDQLSICFVLLITGVGSLIHIYSVAYMAEDPDR 120 Query 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVM 180 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHK SAATAAKKAFVM Sbjct 121 RRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKASAATAAKKAFVM 180 Query 181 NRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQ 240 NRVGDAGLA+GMF+ FSTFGTLSYAGVFAG PAASR LTA+GLL+LLGACAKSAQVPLQ Sbjct 181 NRVGDAGLALGMFVMFSTFGTLSYAGVFAGAPAASRGALTAMGLLLLLGACAKSAQVPLQ 240 Query 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAI 300 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRS LYNLAP AQLAVV+VG VTLL G + Sbjct 241 AWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSNLLYNLAPDAQLAVVVVGTVTLLLGGV 300 Query 301 IGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIH 360 IGCAKDDIKRALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSG+VIH Sbjct 301 IGCAKDDIKRALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGSVIH 360 Query 361 AMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGS 420 A+HEEQDMRRYGGLRAALPVTF TFGL YLAIIGVPPFAGFFSKDAIIEAALGAG RG Sbjct 361 AIHEEQDMRRYGGLRAALPVTFVTFGLGYLAIIGVPPFAGFFSKDAIIEAALGAGDTRGY 420 Query 421 LLGGAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGG 480 +LGGAALLGAGVTAFYMTRVMLMTFFGEKRW PGAHPHEAPA+MTWPMILLA GSVFSGG Sbjct 421 VLGGAALLGAGVTAFYMTRVMLMTFFGEKRWAPGAHPHEAPALMTWPMILLAFGSVFSGG 480 Query 481 LLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAP 540 LLA+GGTL+ WL+PV G+HEEATHALPTWV+TT+ALGVVAVGI VAYRMYGTA IPRVAP Sbjct 481 LLAMGGTLQRWLEPVGGAHEEATHALPTWVSTTVALGVVAVGIVVAYRMYGTAAIPRVAP 540 Query 541 VRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNR 600 VRVS LT AARAD+Y DAFNEEVFMRPGAQLT+AVV VD+AGVDGSVNALA LVS TSNR Sbjct 541 VRVSVLTTAARADMYADAFNEEVFMRPGAQLTDAVVEVDNAGVDGSVNALAGLVSMTSNR 600 Query 601 LRQMQTGFARNYALSM 616 LR MQTGFARNYALSM Sbjct 601 LRLMQTGFARNYALSM 616 >gi|118467369|ref|YP_886413.1| NADH dehydrogenase subunit L [Mycobacterium smegmatis str. MC2 155] gi|118168656|gb|ABK69552.1| NADH-quinone oxidoreductase, L subunit [Mycobacterium smegmatis str. MC2 155] Length=629 Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust. Identities = 485/623 (78%), Positives = 541/623 (87%), Gaps = 2/623 (0%) Query 11 WLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQ 70 WLL+ALP AGA ILL GRR+D WGHLLGCA +LAAF VG +L A MLGR G ERA+H+ Sbjct 9 WLLIALPAAGATILLLAGRRSDRWGHLLGCAMSLAAFAVGTVLFAGMLGRSGEERAVHEA 68 Query 71 VFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLF 130 +F+W+P GGLQVDFGLQ+DQLS+CFVLLI+GVGSLIHIYS+GYMAEDPDRRRFF YLNLF Sbjct 69 LFSWVPVGGLQVDFGLQLDQLSVCFVLLITGVGSLIHIYSIGYMAEDPDRRRFFAYLNLF 128 Query 131 LASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAV 190 LA+MLLLV+ADNY+ LY GWEGVGLASYLLIGFW HKPSAATAAKKAFV+NRVGD GLA+ Sbjct 129 LAAMLLLVLADNYLGLYAGWEGVGLASYLLIGFWSHKPSAATAAKKAFVVNRVGDMGLAI 188 Query 191 GMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGP 250 + + F+T G++S+AGVFA P S A L+AIGLL+LLGAC KSAQVPLQ+WLGDAMEGP Sbjct 189 ALMIMFATIGSISFAGVFAAAPGLSEATLSAIGLLLLLGACGKSAQVPLQSWLGDAMEGP 248 Query 251 TPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKR 310 TPVSALIHAATMVTAGVYLIVRSGP+++LAPTAQ VVIVGAVTLLFGAIIGCAKDDIK+ Sbjct 249 TPVSALIHAATMVTAGVYLIVRSGPIFDLAPTAQTGVVIVGAVTLLFGAIIGCAKDDIKK 308 Query 311 ALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRR 370 ALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLG+G+V+HAM++E +MRR Sbjct 309 ALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGAGSVMHAMNDEVNMRR 368 Query 371 YGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGA 430 YGGLR LPVTFATFGL YLAIIGVPP AGFFSKD IIEAALGAGG RG +LGGAA+LGA Sbjct 369 YGGLRKVLPVTFATFGLGYLAIIGVPPLAGFFSKDGIIEAALGAGGARGVILGGAAILGA 428 Query 431 GVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLRH 490 G+TAFYMTRVMLMTFFGEKRW +HPHEAPAVMTWPMILLAVGSV SGG LA+GGTL H Sbjct 429 GITAFYMTRVMLMTFFGEKRWAANSHPHEAPAVMTWPMILLAVGSVVSGGALAIGGTLSH 488 Query 491 WLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAAA 550 WL+PVVG+H EA HA+P WV T + L VVAVGIAVAYRMY +P P SALT AA Sbjct 489 WLEPVVGTH-EAHHAVPVWVVTAIVLAVVAVGIAVAYRMYARQAVPEEVP-EGSALTVAA 546 Query 551 RADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFAR 610 R DLYGDAFNE VFMR G LT A+V VDD VDG+ LA LVS+TS+ LRQ+QTGFAR Sbjct 547 RRDLYGDAFNEAVFMRGGQTLTAAMVTVDDKAVDGTAGGLAALVSRTSDALRQVQTGFAR 606 Query 611 NYALSMLVGAVLVAAALLVVQLW 633 +YALSML G+ LV AA+L VQLW Sbjct 607 SYALSMLGGSALVVAAILAVQLW 629 >gi|126434134|ref|YP_001069825.1| NADH dehydrogenase subunit L [Mycobacterium sp. JLS] gi|126233934|gb|ABN97334.1| NADH dehydrogenase subunit L [Mycobacterium sp. JLS] Length=626 Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/623 (76%), Positives = 539/623 (87%), Gaps = 2/623 (0%) Query 11 WLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQ 70 WLL+ALPLAGA +LL GRR+D WGHLLG AAA+A+F VGA+L A M+GR +RA+H+ Sbjct 6 WLLIALPLAGAVVLLLAGRRSDRWGHLLGTAAAVASFVVGAVLFAGMVGRPAEDRAVHET 65 Query 71 VFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLF 130 +F+W+P G LQVDFGLQ+DQLSMCFVLLI+GVGSLIH+YS+GYMA DPDRRRFF YLNLF Sbjct 66 LFSWVPVGDLQVDFGLQLDQLSMCFVLLITGVGSLIHVYSIGYMAHDPDRRRFFAYLNLF 125 Query 131 LASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAV 190 LA+MLLLV+ADNY+ LYVGWEGVGLASYLLIGFW +KPSAATAAKKAFV+NRVGD GLA+ Sbjct 126 LAAMLLLVLADNYLGLYVGWEGVGLASYLLIGFWSYKPSAATAAKKAFVVNRVGDMGLAI 185 Query 191 GMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGP 250 + + F+T G++S+AGVF P LTAIGLL+LLGAC KSAQVPLQ+WLGDAMEGP Sbjct 186 ALMIMFATVGSVSFAGVFGAAPQLGEGTLTAIGLLLLLGACGKSAQVPLQSWLGDAMEGP 245 Query 251 TPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKR 310 TPVSALIHAATMVTAGVYLIVRSGP+++LAPTAQLAVVIVG VTLLFGAIIGCAKDDIK+ Sbjct 246 TPVSALIHAATMVTAGVYLIVRSGPVFDLAPTAQLAVVIVGTVTLLFGAIIGCAKDDIKK 305 Query 311 ALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRR 370 ALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLG+G+V+HAM +E +MRR Sbjct 306 ALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGAGSVMHAMDDEVNMRR 365 Query 371 YGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGA 430 YGGLR ALP+TFATFGL YLAIIGVPP AGFFSKD IIEAALGAGG++G +LGGAA+LGA Sbjct 366 YGGLRKALPITFATFGLGYLAIIGVPPLAGFFSKDGIIEAALGAGGVKGWILGGAAILGA 425 Query 431 GVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLRH 490 G+TAFYMTRVMLMTFFGEKRW HPHEAPAVMT PMILLA+GSV SGGLLAVGGTL H Sbjct 426 GITAFYMTRVMLMTFFGEKRWADSTHPHEAPAVMTAPMILLAIGSVASGGLLAVGGTLSH 485 Query 491 WLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAAA 550 WL+PVVG+HEEA HA+P VAT + L V+AVGIA+AYRMYG +P AP SALT AA Sbjct 486 WLEPVVGTHEEA-HAVPVVVATIVILSVIAVGIAIAYRMYGRRAVPAEAPAG-SALTVAA 543 Query 551 RADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFAR 610 R DLYGDA NE VFMRPG +T +V+VDD +DG+ LATLV++ S+ LR +QTGFAR Sbjct 544 RRDLYGDALNEAVFMRPGQAVTAGMVSVDDRAIDGAATGLATLVARASDGLRGLQTGFAR 603 Query 611 NYALSMLVGAVLVAAALLVVQLW 633 +YAL ML GA LV AA+L V LW Sbjct 604 SYALGMLGGAALVVAAILAVNLW 626 >gi|108798536|ref|YP_638733.1| NADH dehydrogenase subunit L [Mycobacterium sp. MCS] gi|119867636|ref|YP_937588.1| NADH dehydrogenase subunit L [Mycobacterium sp. KMS] gi|108768955|gb|ABG07677.1| NADH dehydrogenase subunit L [Mycobacterium sp. MCS] gi|119693725|gb|ABL90798.1| NADH dehydrogenase subunit L [Mycobacterium sp. KMS] Length=642 Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust. Identities = 472/639 (74%), Positives = 535/639 (84%), Gaps = 18/639 (2%) Query 11 WLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQ 70 WLL+ALPLAGA +LL GRR+D WGHLLG AAA+A+F VG +L A MLGR +RA+H+ Sbjct 6 WLLIALPLAGAVVLLLAGRRSDRWGHLLGTAAAVASFVVGVVLFAGMLGRPAEDRAVHET 65 Query 71 VFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMA-----------EDPD 119 +F+W+P G LQVDFGLQ+DQLSMCFVLLI+GVGSLIH+YS+GYMA P Sbjct 66 LFSWVPVGDLQVDFGLQLDQLSMCFVLLITGVGSLIHVYSIGYMAPGAQLAERPTDTGPS 125 Query 120 RRRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFV 179 RR FF YLNLFLA+MLLLV+ADNY+ LYVGWEGVGLASYLLIGFW +KPSAATAAKKAFV Sbjct 126 RRLFFAYLNLFLAAMLLLVLADNYLGLYVGWEGVGLASYLLIGFWSYKPSAATAAKKAFV 185 Query 180 MNRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPL 239 +NRVGD GLA+ + + F+T G++S+AGVF P LTAIGLL+LLGAC KSAQVPL Sbjct 186 VNRVGDMGLAIALMIMFATVGSVSFAGVFGAAPQLGEGTLTAIGLLLLLGACGKSAQVPL 245 Query 240 QAWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGA 299 Q+WLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGP+++LAPTAQLAVVIVG VTLLFGA Sbjct 246 QSWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPVFDLAPTAQLAVVIVGTVTLLFGA 305 Query 300 IIGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVI 359 IIGCAKDDIK+ALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLG+G+V+ Sbjct 306 IIGCAKDDIKKALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGAGSVM 365 Query 360 HAMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRG 419 HAM +E +MRRYGGLR ALP+TFATFGL YLAIIGVPP AGFFSKD IIEAALGAGG++G Sbjct 366 HAMDDEVNMRRYGGLRKALPITFATFGLGYLAIIGVPPLAGFFSKDGIIEAALGAGGVKG 425 Query 420 SLLGGAALLGAGVTAFYMTRVMLMTFFGEKRWT-----PGAHPHEAPAVMTWPMILLAVG 474 +LGGAA+LGAG+TAFYMTRVMLMTFFGEKRW P HPHEAPAVMT PMI+LAVG Sbjct 426 WILGGAAILGAGITAFYMTRVMLMTFFGEKRWAAVGDGPEVHPHEAPAVMTVPMIVLAVG 485 Query 475 SVFSGGLLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAP 534 SV SGGLLA+GG L HWL+PVVG+HEE THA+P VAT + L VVAVGIAVAYRMY T Sbjct 486 SVASGGLLAIGGALSHWLEPVVGTHEE-THAVPVVVATIVILSVVAVGIAVAYRMYATRE 544 Query 535 IPRVAPVRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLV 594 +P PV SALT AAR DLYGDA NE VFMRPG +T +V+VDD +DG+ LATLV Sbjct 545 VPAEVPVG-SALTVAARRDLYGDALNEAVFMRPGQAVTAGMVSVDDRAIDGAATGLATLV 603 Query 595 SQTSNRLRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 ++ SN LR +QTGFAR+YAL ML GA LV AA+L V LW Sbjct 604 ARASNGLRGLQTGFARSYALGMLGGAALVVAAILAVNLW 642 >gi|315445440|ref|YP_004078319.1| NADH dehydrogenase subunit L [Mycobacterium sp. Spyr1] gi|315263743|gb|ADU00485.1| NADH dehydrogenase subunit L [Mycobacterium sp. Spyr1] Length=638 Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/635 (72%), Positives = 515/635 (82%), Gaps = 14/635 (2%) Query 11 WLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQ 70 WLL+A+PLAGAAILL GRR DAWGHLLG AAALA+FG A++ MLGRD +RA+H+ Sbjct 6 WLLIAVPLAGAAILLLAGRRCDAWGHLLGTAAALASFGCAAVMFTGMLGRDPEQRAVHET 65 Query 71 VFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMA------EDPD----- 119 +F+W+P G L+VDFGLQ+DQLSMCF LLI+GVGSLIHIYS+GYMA E PD Sbjct 66 LFSWVPVGELRVDFGLQLDQLSMCFALLITGVGSLIHIYSIGYMASGAQPAERPDDPGRS 125 Query 120 RRRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFV 179 RR FF YLNLF+A+MLLLV+ADNY+ LY+GWEGVGLASYLLIGFW HKPSAATAAKKAFV Sbjct 126 RRLFFAYLNLFVAAMLLLVLADNYLGLYMGWEGVGLASYLLIGFWSHKPSAATAAKKAFV 185 Query 180 MNRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPL 239 +NRVGD GLAV + + F++ G + + VF P LTAIGL +LL AC KSAQVPL Sbjct 186 VNRVGDVGLAVALMVMFASVGAVGFDAVFEATPQLGDGTLTAIGLTLLLAACGKSAQVPL 245 Query 240 QAWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGA 299 Q+WLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGP+++LAP AQ AVVIVGAVTLLFGA Sbjct 246 QSWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPVFDLAPHAQTAVVIVGAVTLLFGA 305 Query 300 IIGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVI 359 +IGCAKDDIK+ALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLG+G+V+ Sbjct 306 VIGCAKDDIKKALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGAGSVM 365 Query 360 HAMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRG 419 HAM++E DMRRYGGLR ALP+TF TFGL YLAIIG+PP AGFFSKD IIEAALGAGG++G Sbjct 366 HAMNDEVDMRRYGGLRTALPITFVTFGLGYLAIIGIPPLAGFFSKDGIIEAALGAGGVKG 425 Query 420 SLLGGAALLGAGVTAFYMTRVMLMTFFGEKRWT-PGAHPHEAPAVMTWPMILLAVGSVFS 478 +LGG +LGAG+TAFYMTRVMLMTFFG +RW GAHPHEAPAVMTWPMILLA+GSV + Sbjct 426 VILGGVTILGAGITAFYMTRVMLMTFFGTRRWEGSGAHPHEAPAVMTWPMILLAIGSVTA 485 Query 479 GGLLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRV 538 G LA+GGTL HWL+PVVG +E H LP WV T + L VVAVG+A+AYRMYG P+P Sbjct 486 GAALAIGGTLEHWLEPVVGV-QEIHHVLPVWVVTVIVLSVVAVGVAIAYRMYGARPVPTD 544 Query 539 APVRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTS 598 P SALT AAR DLYGD NE V MRPG T +V +DD VDG+ L VS+ S Sbjct 545 VPPG-SALTVAARRDLYGDTVNERVLMRPGMTFTRRLVELDDEAVDGAGAGLGAGVSRVS 603 Query 599 NRLRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 RLRQ QTGFAR+YALSML G LV +L V LW Sbjct 604 ERLRQWQTGFARSYALSMLAGTALVVGMILAVNLW 638 >gi|145225071|ref|YP_001135749.1| NADH dehydrogenase subunit L [Mycobacterium gilvum PYR-GCK] gi|145217557|gb|ABP46961.1| NADH dehydrogenase subunit L [Mycobacterium gilvum PYR-GCK] Length=638 Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/635 (72%), Positives = 516/635 (82%), Gaps = 14/635 (2%) Query 11 WLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQ 70 WLL+A+PLAGAAILL GRR DAWGHLLG AAALA+FG A++ MLGRD +RA+H+ Sbjct 6 WLLIAVPLAGAAILLLAGRRCDAWGHLLGTAAALASFGCAAVMFTGMLGRDPEQRAVHET 65 Query 71 VFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMA------EDPD----- 119 +F+W+P G L+VDFGLQ+DQLSMCF LLI+GVGSLIHIYS+GYMA E PD Sbjct 66 LFSWVPVGELRVDFGLQLDQLSMCFALLITGVGSLIHIYSIGYMASGAQPAERPDDPGRS 125 Query 120 RRRFFGYLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFV 179 RR FF YLNLF+A+MLLLV+ADNY+ LY+GWEGVGLASYLLIGFW HKPSAATAAKKAFV Sbjct 126 RRLFFAYLNLFVAAMLLLVLADNYLGLYMGWEGVGLASYLLIGFWSHKPSAATAAKKAFV 185 Query 180 MNRVGDAGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPL 239 +NRVGD GLAV + + F++ G + + VF P LTAIGL +LL AC KSAQVPL Sbjct 186 VNRVGDVGLAVALMVMFASVGAVGFDAVFEAAPQLGDGTLTAIGLTLLLAACGKSAQVPL 245 Query 240 QAWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGA 299 Q+WLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGP+++LAP AQ AVVIVGAVTLLFGA Sbjct 246 QSWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPVFDLAPHAQTAVVIVGAVTLLFGA 305 Query 300 IIGCAKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVI 359 +IGCAKDDIK+ALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLG+G+V+ Sbjct 306 VIGCAKDDIKKALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGAGSVM 365 Query 360 HAMHEEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRG 419 HAM++E DMRRYGGLR ALP+TF TFGL YLAIIG+PP AGFFSKD IIEAALGAGG++G Sbjct 366 HAMNDEVDMRRYGGLRTALPITFVTFGLGYLAIIGIPPLAGFFSKDGIIEAALGAGGVKG 425 Query 420 SLLGGAALLGAGVTAFYMTRVMLMTFFGEKRWT-PGAHPHEAPAVMTWPMILLAVGSVFS 478 +LGG +LGAG+TAFYMTRVMLMTFFG +RW GAHPHEAPAVMTWPMILLA+GSV + Sbjct 426 VILGGVTILGAGITAFYMTRVMLMTFFGTRRWEGSGAHPHEAPAVMTWPMILLAIGSVTA 485 Query 479 GGLLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRV 538 G LA+GGTL HWL+PVVG+ +E H LP WV T + L VVAVG+A+AYRMYG P+P Sbjct 486 GAALAIGGTLEHWLEPVVGA-QEIHHVLPVWVVTVIVLSVVAVGVAIAYRMYGARPVPAD 544 Query 539 APVRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTS 598 P SALT AAR DLYGD NE V MRPG T +V +DD VDG+ L VS+ S Sbjct 545 VPPG-SALTVAARRDLYGDTVNERVLMRPGMTFTRHLVELDDEAVDGAGAGLGAGVSRVS 603 Query 599 NRLRQMQTGFARNYALSMLVGAVLVAAALLVVQLW 633 RLRQ QTGFAR+YALSML G LV +L V LW Sbjct 604 ERLRQWQTGFARSYALSMLAGTALVVGMILAVNLW 638 >gi|120402872|ref|YP_952701.1| NADH dehydrogenase subunit L [Mycobacterium vanbaalenii PYR-1] gi|119955690|gb|ABM12695.1| NADH dehydrogenase subunit L [Mycobacterium vanbaalenii PYR-1] Length=626 Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/623 (74%), Positives = 519/623 (84%), Gaps = 2/623 (0%) Query 11 WLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQ 70 WLL+ALPLAGAAILL GRR+D WGHLLG AAA+A+F A+L DMLGRDG R++ + Sbjct 6 WLLIALPLAGAAILLLSGRRSDRWGHLLGTAAAIASFVCAALLFTDMLGRDGENRSVQES 65 Query 71 VFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLF 130 +F+W+PAG L+VDFGLQ+DQLSMCFVLLI+GVGSLIH+YS+GYMAEDP RRRFFGYLNLF Sbjct 66 LFSWVPAGELRVDFGLQLDQLSMCFVLLITGVGSLIHVYSIGYMAEDPGRRRFFGYLNLF 125 Query 131 LASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAV 190 LA+MLLLV+ADNY+ LY+GWEGVGLASYLLIGFW HKPSAATAAKKAFV+NRVGD GLAV Sbjct 126 LAAMLLLVLADNYLGLYMGWEGVGLASYLLIGFWSHKPSAATAAKKAFVVNRVGDVGLAV 185 Query 191 GMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGP 250 + + F+ G + + VF P LT +GL++LL AC KSAQVPLQ+WLGDAMEGP Sbjct 186 ALMVMFAAVGAVGFTEVFDAAPQLGEGTLTVLGLMLLLAACGKSAQVPLQSWLGDAMEGP 245 Query 251 TPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKR 310 TPVSALIHAATMVTAGVYLIVRSGP+++LAP AQ AVV+VGAVTLLFGA+IGCAKDDIK+ Sbjct 246 TPVSALIHAATMVTAGVYLIVRSGPVFDLAPHAQTAVVVVGAVTLLFGAVIGCAKDDIKK 305 Query 311 ALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRR 370 ALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLG+G+V+HAM +E DMRR Sbjct 306 ALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGAGSVMHAMDDEVDMRR 365 Query 371 YGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGA 430 YGGLR ALPVTF TFGL YLAIIG+PP AGFFSKD IIE ALGAGG +G +LGGA +LGA Sbjct 366 YGGLRRALPVTFVTFGLGYLAIIGIPPLAGFFSKDGIIEVALGAGGAKGVILGGATILGA 425 Query 431 GVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLRH 490 G+TAFYMTRVMLMTFFGEKRW HPHE+PAVMTWPMILLA+GSV +GG LA+GGTL H Sbjct 426 GITAFYMTRVMLMTFFGEKRWAEDNHPHESPAVMTWPMILLAIGSVTAGGALAIGGTLEH 485 Query 491 WLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAAA 550 WL+PVVG+H E H LP WV T + L VVAVGI VAYRMYG +P P SALT AA Sbjct 486 WLEPVVGAH-EIHHVLPVWVVTVIVLSVVAVGIVVAYRMYGFRAVPEQVPAG-SALTVAA 543 Query 551 RADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFAR 610 R DLYGD FNE V MRPG LT +V +DD VDG+ LA VS+ S LRQ+QTGFAR Sbjct 544 RRDLYGDTFNETVLMRPGMSLTRGLVELDDDAVDGAAGGLAAGVSRISEGLRQLQTGFAR 603 Query 611 NYALSMLVGAVLVAAALLVVQLW 633 +YALSML GA LV A +L V LW Sbjct 604 SYALSMLAGAALVVAMILAVNLW 626 >gi|226306203|ref|YP_002766163.1| NADH-quinone oxidoreductase chain L [Rhodococcus erythropolis PR4] gi|226185320|dbj|BAH33424.1| NADH-quinone oxidoreductase chain L [Rhodococcus erythropolis PR4] Length=630 Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/627 (70%), Positives = 510/627 (82%), Gaps = 2/627 (0%) Query 7 THYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERA 66 T WLL ALPL GAA+LL GRRT+AWGHLL C A+A+F V + MLGRD +R Sbjct 6 TSAIWLLPALPLCGAAVLLLAGRRTNAWGHLLACVMAIASFVVAVVFFIAMLGRDTADRT 65 Query 67 IHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGY 126 + + +F+W+P LQV+FGLQ+DQLSMCFVLLI+GVGSLIHIYSVGYMA DP+RR+FF + Sbjct 66 VTEHLFSWVPVDSLQVEFGLQLDQLSMCFVLLITGVGSLIHIYSVGYMAHDPERRKFFAH 125 Query 127 LNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDA 186 LNLFLA+MLLLV+ADN++ LYVGWEGVGLASYLLIGFW HKPSAATAAKKAFV+NRVGD Sbjct 126 LNLFLAAMLLLVLADNFLGLYVGWEGVGLASYLLIGFWQHKPSAATAAKKAFVVNRVGDI 185 Query 187 GLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDA 246 GL + M L FSTFG+LS++ VF AS VLTAIGL++LL ACAKSAQVPLQ+WLGDA Sbjct 186 GLMIAMMLMFSTFGSLSFSNVFGDASGASEGVLTAIGLMLLLAACAKSAQVPLQSWLGDA 245 Query 247 MEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKD 306 MEGPTPVSALIHAATMVTAGVYLIVRS P+++LAP AQL VVIVGAVTLLFGAIIGCAKD Sbjct 246 MEGPTPVSALIHAATMVTAGVYLIVRSNPIFDLAPDAQLVVVIVGAVTLLFGAIIGCAKD 305 Query 307 DIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 366 DIK+ALAAST+SQIGYMVLAAGLGPAGYAFAI+HL+THGFFKAGLFLG+G+V+HAM++E Sbjct 306 DIKKALAASTMSQIGYMVLAAGLGPAGYAFAILHLITHGFFKAGLFLGAGSVMHAMNDET 365 Query 367 DMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAA 426 DMRRYGGLRA +P+TF TFGL YLAIIGVPPFAGFFSKD IIE A+G GG++G +LG Sbjct 366 DMRRYGGLRAFMPLTFVTFGLGYLAIIGVPPFAGFFSKDKIIEVAIGEGGVKGVVLGIVT 425 Query 427 LLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 LLGA +TAFYM+RVMLMTFFG+ RW PHE+PAVMT PMI+LAVGSV +G LL +G Sbjct 426 LLGAALTAFYMSRVMLMTFFGKARWE-NQKPHESPAVMTSPMIILAVGSVGAGMLLTIGS 484 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSAL 546 +L++WL+PVVGSH +P W T LAL VA G+A+AYR Y T IP VAP VS L Sbjct 485 SLQNWLEPVVGSH-HVEPPIPAWSITALALLAVAAGVAIAYREYATREIPVVAPTPVSPL 543 Query 547 TAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQT 606 T AAR DLYGDAFNE VFM+PG QLT ++ VD G+ G V + A +V+ S R++QT Sbjct 544 TVAARRDLYGDAFNEAVFMKPGQQLTKSLEVVDTKGIGGVVGSFAVVVTGLSTLTRKLQT 603 Query 607 GFARNYALSMLVGAVLVAAALLVVQLW 633 GF R+YAL M VGA LV A ++ V LW Sbjct 604 GFVRSYALVMFVGATLVVATMMAVTLW 630 >gi|312139319|ref|YP_004006655.1| NADH dehydrogenase (quinone) chain l nuol [Rhodococcus equi 103S] gi|311888658|emb|CBH47970.1| NADH dehydrogenase (quinone) chain L NuoL [Rhodococcus equi 103S] Length=643 Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/615 (71%), Positives = 500/615 (82%), Gaps = 9/615 (1%) Query 11 WLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQ 70 WLL ALPL GA +LL GRR+D WGHLLGCAAALA+F + ML DM+GR +R Q Sbjct 12 WLLPALPLTGAVVLLLAGRRSDRWGHLLGCAAALASFVIALMLFVDMVGRADSDRVAQQH 71 Query 71 VFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLF 130 +F+W+P GLQVD GL++DQLSMCFVLL++GVGSLIHIYSVGYM DP RRRFF YLNLF Sbjct 72 LFSWLPVAGLQVDVGLRLDQLSMCFVLLVTGVGSLIHIYSVGYMKTDPGRRRFFAYLNLF 131 Query 131 LASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAV 190 LASMLLLV+ADNY+ LYVGWEGVGLASYLLIGFW +KPSAATAAKKAFV+NRVGD GL V Sbjct 132 LASMLLLVLADNYLGLYVGWEGVGLASYLLIGFWQYKPSAATAAKKAFVVNRVGDMGLMV 191 Query 191 GMFLTFSTFGTLSYAGVFAGV-----PAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGD 245 G+ + F+TFG++S+A V GV AS V TA+GLL+LL AC KSAQVPLQ+WLGD Sbjct 192 GLMIMFATFGSVSFADVLGGVGSGDTSGASGGVTTALGLLLLLAACGKSAQVPLQSWLGD 251 Query 246 AMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAK 305 AMEGPTPVSALIHAATMVTAGVYLIVRSGP+Y AP AQ+AVV+VGAVTLLFGAIIGCAK Sbjct 252 AMEGPTPVSALIHAATMVTAGVYLIVRSGPIYEAAPGAQVAVVLVGAVTLLFGAIIGCAK 311 Query 306 DDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEE 365 DDIK+ALAAST+SQIGYMV+AAGLGPAGYAFAIM LL HGFFKAGLFLG+G+V+H M +E Sbjct 312 DDIKKALAASTMSQIGYMVMAAGLGPAGYAFAIMLLLAHGFFKAGLFLGAGSVMHGMDDE 371 Query 366 QDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGA 425 DMRRYGGLR +P+TFATFGL YLAIIG+PPF+GFFSKD IIEAA G+GGI G+ LG Sbjct 372 TDMRRYGGLRTLMPITFATFGLGYLAIIGIPPFSGFFSKDKIIEAAFGSGGIGGTALGTV 431 Query 426 ALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVG 485 AL+GAG+TAFYMTRVMLMTFFGE+RW PGAHPHE+P VMT PMI+LAVGSV +GGLLAVG Sbjct 432 ALIGAGLTAFYMTRVMLMTFFGERRWNPGAHPHESPGVMTVPMIVLAVGSVAAGGLLAVG 491 Query 486 GTLRHWLQPVV----GSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPV 541 GTL WL+PV G+ E A+P WV T + L VV +G +AYR YGT P+P VAP Sbjct 492 GTLEQWLEPVWTEFGGATEHGELAVPVWVVTAVTLAVVLIGAGIAYRQYGTRPVPVVAPA 551 Query 542 RVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRL 601 +VSA+T AAR DLYGD +E VFMRPG +L + V+D G+DG+ + ++ S L Sbjct 552 QVSAVTVAARRDLYGDDVDEAVFMRPGQRLVRGLTVVEDKGIDGATGGVGAVLGLLSVAL 611 Query 602 RQMQTGFARNYALSM 616 R++QTGF R+YAL M Sbjct 612 RRLQTGFVRSYALYM 626 >gi|333991510|ref|YP_004524124.1| NADH dehydrogenase I (chain L) NuoL (NADH- ubiquinone oxidoreductase chain L) [Mycobacterium sp. JDM601] gi|333487478|gb|AEF36870.1| NADH dehydrogenase I (chain L) NuoL (NADH- ubiquinone oxidoreductase chain L) [Mycobacterium sp. JDM601] Length=645 Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/625 (72%), Positives = 508/625 (82%), Gaps = 15/625 (2%) Query 7 THYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERA 66 + +WLLVALP AGA ILL GGRRTD WGHLL CAA L++FG+G LLA+MLGR G +RA Sbjct 5 SQLSWLLVALPAAGALILLLGGRRTDRWGHLLACAAVLSSFGIGLALLAEMLGRSGEDRA 64 Query 67 IHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGY 126 IH +F+W+P G LQVDFG+ IDQLS+CFVLLISGVG+LIHIYS+GYM DPDRRRFF Y Sbjct 65 IHSHLFSWVPVGALQVDFGILIDQLSICFVLLISGVGALIHIYSIGYMKHDPDRRRFFAY 124 Query 127 LNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDA 186 LNLF+A+MLLLVVADNY+ LYVGWEGVGLASYLLIGFWY +P AA A KKAFV NRVGD Sbjct 125 LNLFVAAMLLLVVADNYLGLYVGWEGVGLASYLLIGFWYARPVAAAAGKKAFVSNRVGDI 184 Query 187 GLAVGMFLTFSTFGTLSYAGVFAGVPAA-SRAVLTAIGLLMLLGACAKSAQVPLQAWLGD 245 GL++ MF+ F+ FGTLS+ G+F V A S TAIGLL+LLGACAKSAQVPLQAWL D Sbjct 185 GLSLAMFVMFAGFGTLSFDGLFGAVEEAGSSGWTTAIGLLLLLGACAKSAQVPLQAWLFD 244 Query 246 AMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAK 305 AMEGPTPVSALIHAATMVTAGVYLIVRSGP+++L+ A+LAVV+VGA+TLLFGAIIGCAK Sbjct 245 AMEGPTPVSALIHAATMVTAGVYLIVRSGPVFDLSADARLAVVVVGAITLLFGAIIGCAK 304 Query 306 DDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEE 365 DDIKRALAAST+SQIGYMVLAAGLGPAGYA AIMHLLTHGFFKAGLFLGSG+V+H M++E Sbjct 305 DDIKRALAASTVSQIGYMVLAAGLGPAGYAVAIMHLLTHGFFKAGLFLGSGSVMHGMNDE 364 Query 366 QDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGA 425 QDMRRYG LRA +PVTF TFGL YLAIIGVPPFAG++SKDAIIEAAL GG RG +LG Sbjct 365 QDMRRYGALRAFMPVTFVTFGLCYLAIIGVPPFAGYWSKDAIIEAALATGGTRGWILGAV 424 Query 426 ALLGAGVTAFYMTRVMLMTFFGEKRWTPGA----------HPHEAPAVMTWPMILLAVGS 475 +LGAG+TAFYMTRVMLMTF GE+RW HPHE+P VMTWPMI+LAVG+ Sbjct 425 TILGAGITAFYMTRVMLMTFGGERRWAADESEVSHERALQHPHESPRVMTWPMIVLAVGA 484 Query 476 VFSGGLLAVGGTLRHWLQPVVGSHEEATHA----LPTWVATTLALGVVAVGIAVAYRMYG 531 VFSG LA+GG L HWL+PVV A H +P W+ + LGVV VG+AVAYR YG Sbjct 485 VFSGAALAIGGRLEHWLEPVVTGAAAAGHEAAHLIPAWLTGAITLGVVLVGVAVAYRRYG 544 Query 532 TAPIPRVAPVRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALA 591 PIP AP VS LT AAR LYGDAFNEEVFMRPG +L A+V VDD VDGSVNA A Sbjct 545 RKPIPITAPTDVSPLTVAARQYLYGDAFNEEVFMRPGNRLAQALVDVDDRVVDGSVNAGA 604 Query 592 TLVSQTSNRLRQMQTGFARNYALSM 616 LV+ S +R++QTGF R+YAL+M Sbjct 605 GLVALASLLMRRLQTGFVRSYALTM 629 >gi|229490796|ref|ZP_04384631.1| NADH-quinone oxidoreductase subunit l [Rhodococcus erythropolis SK121] gi|229322186|gb|EEN87972.1| NADH-quinone oxidoreductase subunit l [Rhodococcus erythropolis SK121] Length=630 Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/627 (70%), Positives = 506/627 (81%), Gaps = 2/627 (0%) Query 7 THYTWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERA 66 T WLL ALPL GAA+LL GRRT+ WGHL C ALA+F V + MLGRD +R Sbjct 6 TSAIWLLPALPLCGAAVLLLAGRRTNTWGHLFACVMALASFAVAVVFFIAMLGRDTADRT 65 Query 67 IHQQVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGY 126 + + +F+W+P LQV+FGLQ+DQLSMCFVLLI+GVGSLIHIYSVGYMA DP+RR+FF Y Sbjct 66 VTEHLFSWVPVDSLQVEFGLQLDQLSMCFVLLITGVGSLIHIYSVGYMAHDPERRKFFAY 125 Query 127 LNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDA 186 LNLFLA+MLLLV+ADN++ LYVGWEGVGLASYLLIGFW HKPSAATAAKKAFV+NRVGD Sbjct 126 LNLFLAAMLLLVLADNFLGLYVGWEGVGLASYLLIGFWQHKPSAATAAKKAFVVNRVGDI 185 Query 187 GLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDA 246 GL + M L FSTFG+LS++ VFA AS VLTA+GL++LL ACAKSAQVPLQ+WLGDA Sbjct 186 GLMIAMMLMFSTFGSLSFSSVFADASGASEGVLTALGLMLLLAACAKSAQVPLQSWLGDA 245 Query 247 MEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKD 306 MEGPTPVSALIHAATMVTAGVYLIVRS P+++LAP AQL VVIVGAVTLLFGAIIGCAKD Sbjct 246 MEGPTPVSALIHAATMVTAGVYLIVRSNPIFDLAPDAQLVVVIVGAVTLLFGAIIGCAKD 305 Query 307 DIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQ 366 DIK+ALAAST+SQIGYMVLAAGLGPAGYAFAI+HL+THGFFKAGLFLG+G+V+HAM++E Sbjct 306 DIKKALAASTMSQIGYMVLAAGLGPAGYAFAILHLITHGFFKAGLFLGAGSVMHAMNDET 365 Query 367 DMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAA 426 DMR YGGLRA +P+TF TFGL YLAIIGVPPFAGFFSKD IIE A+G GGI+G +LG Sbjct 366 DMRSYGGLRAFMPLTFVTFGLGYLAIIGVPPFAGFFSKDKIIEVAIGEGGIKGVVLGIVT 425 Query 427 LLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 LLGA +TAFYM+RVMLMTFFG+ RW PHE+PAVMT PMI+LAVGSV +G LL +G Sbjct 426 LLGAALTAFYMSRVMLMTFFGKARWE-NQKPHESPAVMTSPMIILAVGSVGAGMLLTIGS 484 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSAL 546 +L++WL+PVVGSH +P W T LAL V G+A+AYR Y T IP VAP VS L Sbjct 485 SLQNWLEPVVGSH-HVEPPIPAWSITALALLAVVAGVAIAYREYATREIPLVAPTPVSPL 543 Query 547 TAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQT 606 T AAR DLYGDAFNE VFM+PG QLT ++ D G+ G V + A +V+ S R++QT Sbjct 544 TGAARRDLYGDAFNETVFMKPGQQLTKSLEVFDTKGIGGVVGSFAVVVTGLSALTRKLQT 603 Query 607 GFARNYALSMLVGAVLVAAALLVVQLW 633 GF R+YAL M VGA LV A ++ V LW Sbjct 604 GFVRSYALVMFVGATLVVATMMAVTLW 630 >gi|226365391|ref|YP_002783174.1| NADH dehydrogenase subunit L [Rhodococcus opacus B4] gi|226243881|dbj|BAH54229.1| NADH-quinone oxidoreductase chain L [Rhodococcus opacus B4] Length=630 Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/614 (72%), Positives = 509/614 (83%), Gaps = 2/614 (0%) Query 20 GAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQVFTWIPAGG 79 GAA+LL GRR+DAWGHLLGC ALA+F +G + DMLGRD +R +HQ +F+W+P G Sbjct 19 GAAVLLLTGRRSDAWGHLLGCVTALASFALGLVFFVDMLGRDAADRVVHQILFSWVPVGE 78 Query 80 LQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFLASMLLLVV 139 LQVDFGLQ+DQLS+CFVLLI+GVGSLIHIYSVGYMA DP+RRRFF YLNLFLA+MLLLV+ Sbjct 79 LQVDFGLQLDQLSVCFVLLITGVGSLIHIYSVGYMAHDPERRRFFAYLNLFLAAMLLLVL 138 Query 140 ADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVGMFLTFSTF 199 ADN++ LYVGWEGVGLASYLLIGFW +KPSAA AAKKAFV+NRVGD GL + + + FSTF Sbjct 139 ADNFLGLYVGWEGVGLASYLLIGFWQYKPSAAAAAKKAFVVNRVGDMGLILAIMIMFSTF 198 Query 200 GTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPTPVSALIHA 259 G++ +A VF G AAS LTAIGL +LL AC KSAQVPLQ+WLGDAMEGPTPVSALIHA Sbjct 199 GSIEFADVFTGADAASEGALTAIGLALLLAACGKSAQVPLQSWLGDAMEGPTPVSALIHA 258 Query 260 ATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRALAASTISQ 319 ATMVTAGVYLIVRS +++LAP AQLAVVIVGAVTLLFGAIIGCAKDDIK+ALAAST+SQ Sbjct 259 ATMVTAGVYLIVRSNAIFDLAPNAQLAVVIVGAVTLLFGAIIGCAKDDIKKALAASTMSQ 318 Query 320 IGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRYGGLRAALP 379 IGYMVLAAGLGPAGYAFAIM LLTHGFFKAGLFLG+G+V+H M++E +MRRYGGLR +P Sbjct 319 IGYMVLAAGLGPAGYAFAIMLLLTHGFFKAGLFLGAGSVMHGMNDEVNMRRYGGLRTVMP 378 Query 380 VTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAGVTAFYMTR 439 +TF TFGL YLAIIG+PPF+GFFSKD IIEAA A G++G +LG LLGAG+TAFYMTR Sbjct 379 ITFVTFGLGYLAIIGIPPFSGFFSKDKIIEAAFAAEGVQGVVLGTVTLLGAGLTAFYMTR 438 Query 440 VMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLRHWLQPVVGSH 499 VMLMTFFG++RW P AHPHE+P VMT PMILLAVGSV +G LLAVG +L+HWL+PVVG+H Sbjct 439 VMLMTFFGQRRWDPKAHPHESPGVMTVPMILLAVGSVAAGALLAVGSSLQHWLEPVVGAH 498 Query 500 EEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAAARADLYGDAF 559 ALP W T L L VV G+AVAYR Y PIP VAP V+ALT AAR DLYGDAF Sbjct 499 -HGEPALPVWAITGLTLVVVLAGVAVAYRQYARQPIPDVAPADVTALTVAARRDLYGDAF 557 Query 560 NEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFARNYALSMLVG 619 NE MRPG +LT +V VDD GVDG+VN A LV TS R+R++QTGF R+YAL M G Sbjct 558 NEAALMRPGQELTRTLVTVDDRGVDGAVNGFAALVGGTSVRVRRLQTGFVRSYALFMFAG 617 Query 620 AVLVAAALLVVQLW 633 A L+ A +L V+LW Sbjct 618 AALLVATML-VRLW 630 >gi|333922089|ref|YP_004495670.1| NADH-quinone oxidoreductase chain L [Amycolicicoccus subflavus DQS3-9A1] gi|333484310|gb|AEF42870.1| NADH-quinone oxidoreductase chain L [Amycolicicoccus subflavus DQS3-9A1] Length=634 Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/630 (70%), Positives = 521/630 (83%), Gaps = 12/630 (1%) Query 11 WLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQ 70 WLL ALPL GA +LL GRR+D WGHLLGCA A+A+F +G L DM GRD +R +HQ Sbjct 2 WLLPALPLVGALVLLLAGRRSDPWGHLLGCATAIASFALGVALFFDMAGRDKADRVMHQS 61 Query 71 VFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLF 130 +F+W+P LQVDFGLQ+DQLSMCFVLLI+GVGSLIH+YS+GYM DP+RR+FF YLNLF Sbjct 62 LFSWVPVAELQVDFGLQLDQLSMCFVLLITGVGSLIHVYSIGYMDHDPERRKFFAYLNLF 121 Query 131 LASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAV 190 LA+MLLLV+ADNY+ LYVGWEGVGLASYLLIGFW HKPSAATAAKKAF++NRVGD GLA+ Sbjct 122 LAAMLLLVLADNYLGLYVGWEGVGLASYLLIGFWQHKPSAATAAKKAFLVNRVGDMGLAI 181 Query 191 GMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGP 250 M + F TFGT++++ VFAG AS VLTA+G L+LLGAC KSAQVPLQ+WLGDAMEGP Sbjct 182 AMMIMFVTFGTVAFSEVFAGADGASDGVLTALGFLLLLGACGKSAQVPLQSWLGDAMEGP 241 Query 251 TPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKR 310 TPVSALIHAATMVTAGVYLI RSGP+++L+PTAQ+AVVIVGAVTLLFGAIIGCAKDDIK+ Sbjct 242 TPVSALIHAATMVTAGVYLITRSGPIFDLSPTAQMAVVIVGAVTLLFGAIIGCAKDDIKK 301 Query 311 ALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRR 370 ALAAST+SQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLG+G+V+H M++E +MRR Sbjct 302 ALAASTMSQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGAGSVMHGMNDEVNMRR 361 Query 371 YGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGA 430 YGGLR +P+TF TFGL YLAIIGVPPFAGFFSK+ IIE A+ +GG++G +LG A L GA Sbjct 362 YGGLRTVMPITFVTFGLGYLAIIGVPPFAGFFSKEGIIEVAIDSGGVKGVVLGAAVLFGA 421 Query 431 GVTAFYMTRVMLMTFFGEKRWTPG-----------AHPHEAPAVMTWPMILLAVGSVFSG 479 G+TA+YMTRVM++TFFG++RW P HPHE+P+VMT PMIL+A+GSV SG Sbjct 422 GLTAYYMTRVMILTFFGDRRWEPSLGERSDGEFTALHPHESPSVMTAPMILIAIGSVASG 481 Query 480 GLLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVA 539 LA+GG L HWL+PVVGSH + H +P WV TTLALGVVA+G+AVA R Y IP VA Sbjct 482 AFLALGGRLEHWLEPVVGSH-DGEHVVPVWVITTLALGVVAIGVAVAVRQYAGRDIPVVA 540 Query 540 PVRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSN 599 P VSA+T AAR DLYGDA NE VFMRPG Q T+ VDD VDG+V +A LV S+ Sbjct 541 PTDVSAVTVAARRDLYGDAVNETVFMRPGQQFTHTAAVVDDKVVDGAVGGVAVLVGGLSS 600 Query 600 RLRQMQTGFARNYALSMLVGAVLVAAALLV 629 ++R++QTGF R+YAL ML+GA LV AA+L+ Sbjct 601 QVRRIQTGFTRSYALYMLIGAALVIAAMLL 630 >gi|54024626|ref|YP_118868.1| NADH dehydrogenase subunit L [Nocardia farcinica IFM 10152] gi|54016134|dbj|BAD57504.1| putative NADH dehydrogenase I chain L [Nocardia farcinica IFM 10152] Length=628 Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/600 (72%), Positives = 488/600 (82%), Gaps = 1/600 (0%) Query 20 GAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQVFTWIPAGG 79 GA +LL GRR D WGHLLG A ALA+F V + MLGR RAIH +F+W+P G Sbjct 16 GAVVLLLIGRRGDRWGHLLGTATALASFVVAVVAFVAMLGRAEPARAIHTDLFSWVPVAG 75 Query 80 LQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFLASMLLLVV 139 LQVDFGL +DQLSMCFVLLI+GVG+LIH+YS+GYM DP RRRFF YLNLFLA+ML+LV+ Sbjct 76 LQVDFGLSLDQLSMCFVLLITGVGTLIHVYSIGYMNADPGRRRFFAYLNLFLAAMLILVL 135 Query 140 ADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVGMFLTFSTF 199 A+NY++LY+GWEGVGLASYLLIGFWYHKPSAATAAKKAFV+NRVGD GLA+ M F+TF Sbjct 136 ANNYLVLYLGWEGVGLASYLLIGFWYHKPSAATAAKKAFVVNRVGDMGLALAMMAMFATF 195 Query 200 GTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPTPVSALIHA 259 G++ + VFA P AS A LTAIGLL+LL AC KSAQVPLQ+WLGDAMEGPTPVSALIHA Sbjct 196 GSVGFDTVFAAAPGASEATLTAIGLLLLLAACGKSAQVPLQSWLGDAMEGPTPVSALIHA 255 Query 260 ATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRALAASTISQ 319 ATMVTAGVYLI RS +++LAP AQL VV+VGAVTLLFGAIIGCAKDDIK+ALAAST+SQ Sbjct 256 ATMVTAGVYLIARSNAIFDLAPGAQLGVVLVGAVTLLFGAIIGCAKDDIKKALAASTMSQ 315 Query 320 IGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRYGGLRAALP 379 IGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLG+G+V+HAM++E DMRRYGGLR LP Sbjct 316 IGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGAGSVMHAMNDETDMRRYGGLRTLLP 375 Query 380 VTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAGVTAFYMTR 439 +T+ TFGL YLAIIGVPPFAGFFSKD IIE A G GG G LG AALLGAG+TAFYMTR Sbjct 376 ITYVTFGLGYLAIIGVPPFAGFFSKDKIIEVAFGDGGAGGYALGTAALLGAGLTAFYMTR 435 Query 440 VMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLRHWLQPVVGSH 499 VMLMTFFGE+RW P HPHEAPAVMT PMILLA+GSV SG L +G L++WL+PVVG+H Sbjct 436 VMLMTFFGERRWAPDTHPHEAPAVMTGPMILLAIGSVASGLLFVLGNGLQNWLEPVVGAH 495 Query 500 EEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAAARADLYGDAF 559 A HA+P V T LAL VVAVG +AY+ Y A IPR AP V LT AAR DLYGDA Sbjct 496 -HAEHAVPPIVVTVLALAVVAVGAGIAYQRYARAEIPRTAPEAVGPLTVAARNDLYGDAV 554 Query 560 NEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFARNYALSMLVG 619 NE + MRPG LT ++V +D+ G+DG VN A L+ S R R++QTGF R+YALSM G Sbjct 555 NEGLLMRPGLHLTRSLVFLDNRGIDGLVNGTAALIGGLSARARRIQTGFVRSYALSMFTG 614 >gi|325676672|ref|ZP_08156347.1| NADH-quinone oxidoreductase subunit L [Rhodococcus equi ATCC 33707] gi|325552527|gb|EGD22214.1| NADH-quinone oxidoreductase subunit L [Rhodococcus equi ATCC 33707] Length=643 Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/615 (70%), Positives = 499/615 (82%), Gaps = 9/615 (1%) Query 11 WLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQ 70 WLL ALPL GA +LL GRR+D WGHLLGCAAALA+F + ML DM+GR +R Q Sbjct 12 WLLPALPLTGAVVLLLAGRRSDRWGHLLGCAAALASFVIALMLFVDMVGRADSDRVAQQH 71 Query 71 VFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLF 130 +F+W+P GLQVD GL++DQLSMCFVLL++GVGSLIHIYSVGYM DP RRRFF YLNLF Sbjct 72 LFSWLPVAGLQVDVGLRLDQLSMCFVLLVTGVGSLIHIYSVGYMKTDPGRRRFFAYLNLF 131 Query 131 LASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAV 190 LA+MLLLV+ADNY+ LYVGWEGVGLASYLLIGFW +KPSAATAAKKAFV+NRVGD GL V Sbjct 132 LAAMLLLVLADNYLGLYVGWEGVGLASYLLIGFWQYKPSAATAAKKAFVVNRVGDMGLMV 191 Query 191 GMFLTFSTFGTLSYAGVFAGV-----PAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGD 245 G+ + F+TFG++S+A V GV AS V TA+GLL+LL AC KSAQVPLQ+WLGD Sbjct 192 GLMIMFATFGSVSFADVLGGVGSGDTSGASGGVTTALGLLLLLAACGKSAQVPLQSWLGD 251 Query 246 AMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAK 305 AMEGPTPVSALIHAATMVTAGVYLIVRSGP+Y AP AQ+AVV+VGAVTLLFGAIIGCAK Sbjct 252 AMEGPTPVSALIHAATMVTAGVYLIVRSGPIYEAAPGAQVAVVLVGAVTLLFGAIIGCAK 311 Query 306 DDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEE 365 DDIK+ALAAST+SQIGYMV+AAGLGPAGY FAIM LL HGFFKAGLFLG+G+V+H M +E Sbjct 312 DDIKKALAASTMSQIGYMVMAAGLGPAGYTFAIMLLLAHGFFKAGLFLGAGSVMHGMDDE 371 Query 366 QDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGA 425 DMRRYGGLR +P+TFATFGL YLAIIG+PPF+GFFSKD IIEAA G+GGI G+ LG Sbjct 372 TDMRRYGGLRTLMPITFATFGLGYLAIIGIPPFSGFFSKDKIIEAAFGSGGIGGTALGTV 431 Query 426 ALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVG 485 AL+GAG+TAFYMTRVMLMTFFGE+RW GAHPHE+P VMT PMI+LAVGSV +GGLLAVG Sbjct 432 ALIGAGLTAFYMTRVMLMTFFGERRWNQGAHPHESPGVMTVPMIVLAVGSVAAGGLLAVG 491 Query 486 GTLRHWLQPVV----GSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPV 541 GTL HWL+PV G+ E A+P WV T + L VV +G +AYR YGT P+P VAP Sbjct 492 GTLEHWLEPVWTEFGGATEHGELAVPVWVVTAVTLAVVLIGAGIAYRQYGTRPVPVVAPA 551 Query 542 RVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRL 601 +VSA+T AAR DLYGD +E VFMRPG +L + V+D G+DG+ + ++ S L Sbjct 552 QVSAVTVAARRDLYGDDVDEAVFMRPGQRLVRGLTVVEDKGIDGATGGVGAVLGLLSVAL 611 Query 602 RQMQTGFARNYALSM 616 R++QTGF R+YAL M Sbjct 612 RRLQTGFVRSYALYM 626 >gi|343926365|ref|ZP_08765870.1| NADH-quinone oxidoreductase chain L [Gordonia alkanivorans NBRC 16433] gi|343763603|dbj|GAA12796.1| NADH-quinone oxidoreductase chain L [Gordonia alkanivorans NBRC 16433] Length=637 Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/627 (69%), Positives = 515/627 (83%), Gaps = 6/627 (0%) Query 11 WLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQ 70 WL+ ALPLAGA ILL GGR TD WGHLLG AAA+A+F VG ++ A M+ R +R + Sbjct 11 WLVPALPLAGAVILLLGGRTTDRWGHLLGTAAAIASFVVGLVMFAGMVSRPADDRGVTDT 70 Query 71 VFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLF 130 +F+W+P G LQVDFG ++DQLSMCFVLLI+GVGSLIH+YS+GYMA+DPDRRRFFGYLNLF Sbjct 71 LFSWVPVGELQVDFGFRLDQLSMCFVLLITGVGSLIHVYSIGYMADDPDRRRFFGYLNLF 130 Query 131 LASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAV 190 LA+ML+LV+ADNY+ LY+GWEGVGLASYLLIGFW +KP+AATAAKKAFV+NRVGD GLAV Sbjct 131 LAAMLVLVLADNYLGLYLGWEGVGLASYLLIGFWQYKPTAATAAKKAFVVNRVGDIGLAV 190 Query 191 GMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGP 250 + + F+TFG++++ VF G P A LTA+G ++LL AC KSAQVPLQ+WLGDAMEGP Sbjct 191 ALMIMFATFGSVAFTAVFDGAPQAGEGTLTALGFVLLLAACGKSAQVPLQSWLGDAMEGP 250 Query 251 TPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKR 310 TPVSALIHAATMVTAGVYLIVRSGP+++LAPTAQ+ VV+VGAVTLLFGAIIGCAKDDIK+ Sbjct 251 TPVSALIHAATMVTAGVYLIVRSGPIFDLAPTAQVGVVVVGAVTLLFGAIIGCAKDDIKK 310 Query 311 ALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRR 370 ALAAST+SQIGYMVLAAGLGPAGYAFAI+HLLTHGFFKAGLFLG+G+V+H M++E DMRR Sbjct 311 ALAASTMSQIGYMVLAAGLGPAGYAFAILHLLTHGFFKAGLFLGAGSVMHGMNDETDMRR 370 Query 371 YGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGA 430 YGGLR +PVTF TFG+ YLAIIGVPPFAGF+SKD IIEAA GAGG +G +LGGAALLGA Sbjct 371 YGGLRTLMPVTFVTFGVGYLAIIGVPPFAGFYSKDHIIEAAFGAGGAKGLILGGAALLGA 430 Query 431 GVTAFYMTRVMLMTFFGEKRW-----TPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVG 485 G+TAFYMTRVML+TFFGEKRW P HP E+P VMT PM+L+A+GSV SGGLLA+G Sbjct 431 GITAFYMTRVMLLTFFGEKRWHDGTDAPAPHPDESPRVMTGPMVLIALGSVASGGLLAIG 490 Query 486 GTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSA 545 G+L WL+PVVG H A H +P W T + L VVAVG+A+AYR Y T P+P VAP VS Sbjct 491 GSLERWLEPVVGEH-TAHHLIPVWAMTAIILLVVAVGVAIAYRQYATRPVPVVAPEDVSV 549 Query 546 LTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQ 605 LT AAR DLYGD NEE+ MRPG ++T +VAV+ GVDG + + V++ S R+R Q Sbjct 550 LTVAARRDLYGDTINEELLMRPGQRVTAGLVAVESDGVDGLTSGVGETVTRASRRIRGWQ 609 Query 606 TGFARNYALSMLVGAVLVAAALLVVQL 632 G+ R+YALSM G L+ A ++ V + Sbjct 610 NGYVRSYALSMFAGTTLIVALVMAVNV 636 >gi|111022883|ref|YP_705855.1| NADH dehydrogenase subunit L [Rhodococcus jostii RHA1] gi|110822413|gb|ABG97697.1| probable NADH dehydrogenase subunit L [Rhodococcus jostii RHA1] Length=640 Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/615 (71%), Positives = 498/615 (81%), Gaps = 12/615 (1%) Query 29 RRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQVFTWIPAGGLQVDFGLQI 88 RR+DAWGHLLGCA AL +F +G + DMLGRD ER +HQ +F+W+P G LQVDFGLQ+ Sbjct 28 RRSDAWGHLLGCATALVSFALGVVFFVDMLGRDAAERVVHQTLFSWVPIGELQVDFGLQL 87 Query 89 DQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFLASMLLLVVADNYVLLYV 148 DQLS+CFVLLI+GVGSLIHIYSVGYMA DP+RRRFF YLNLFLA+MLLLV+ADN++ LYV Sbjct 88 DQLSVCFVLLITGVGSLIHIYSVGYMAHDPERRRFFAYLNLFLAAMLLLVLADNFLGLYV 147 Query 149 GWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVGMFLTFSTFGTLSYAGVF 208 GWEGVGLASYLLIGFW +KPSAA AAKKAFV+NRVGD GL + + + FSTFG++ +A VF Sbjct 148 GWEGVGLASYLLIGFWQYKPSAAAAAKKAFVVNRVGDMGLVLAIMIMFSTFGSIEFADVF 207 Query 209 AGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPTPVSALIHAATMVTAGVY 268 AAS VLTAIGL +LL AC KSAQVPLQ+WLGDAMEGPTPVSALIHAATMVTAGVY Sbjct 208 TRADAASEGVLTAIGLALLLAACGKSAQVPLQSWLGDAMEGPTPVSALIHAATMVTAGVY 267 Query 269 LIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRALAASTISQIGYMVLAAG 328 LIVRS +++LAP AQLAVVIVGAVTLLFGAIIGCAKDDIK+ALAAST+SQIGYMVLAAG Sbjct 268 LIVRSNAIFDLAPNAQLAVVIVGAVTLLFGAIIGCAKDDIKKALAASTMSQIGYMVLAAG 327 Query 329 LGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRYGGLRAALPVTFATFGLA 388 LGPAGYAFAIM LLTHGFFKAGLFLG+G+V+H M++E +MRRYGGLR +P+TF TFGL Sbjct 328 LGPAGYAFAIMLLLTHGFFKAGLFLGAGSVMHGMNDEVNMRRYGGLRTVMPITFVTFGLG 387 Query 389 YLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAGVTAFYMTRVMLMTFFGE 448 YLAIIG+PPF+GFFSKD IIEAA A G++G +LG LLGAG+TAFYMTRVMLMTFFG+ Sbjct 388 YLAIIGIPPFSGFFSKDKIIEAAFAAEGVQGVVLGTVTLLGAGLTAFYMTRVMLMTFFGQ 447 Query 449 KRW----------TPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLRHWLQPVVGS 498 RW P A PHE+P VMT PMILLAVGSV +G LLAVG +L+HWL+PVVG+ Sbjct 448 PRWASGAGEGKGDVPVADPHESPGVMTVPMILLAVGSVAAGALLAVGSSLQHWLEPVVGA 507 Query 499 HEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAAARADLYGDA 558 H LP W T L L VV G+AVAYR Y PIP VAP V+A T AAR DLYGDA Sbjct 508 H-HGEPVLPVWAITALTLVVVLAGVAVAYRQYARQPIPEVAPADVTAFTVAARKDLYGDA 566 Query 559 FNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFARNYALSMLV 618 FNE MRPG +LT +V VD +GVDG+VN A LV TS R+R++QTGF R+YAL M Sbjct 567 FNEAALMRPGQELTRTLVTVDGSGVDGAVNGFAALVGGTSMRVRRLQTGFVRSYALFMFA 626 Query 619 GAVLVAAALLVVQLW 633 GA L+ A +L V+LW Sbjct 627 GAALLVATML-VRLW 640 >gi|326382752|ref|ZP_08204442.1| NADH:ubiquinone oxidoreductase subunit L [Gordonia neofelifaecis NRRL B-59395] gi|326198342|gb|EGD55526.1| NADH:ubiquinone oxidoreductase subunit L [Gordonia neofelifaecis NRRL B-59395] Length=633 Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/591 (69%), Positives = 470/591 (80%), Gaps = 0/591 (0%) Query 29 RRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQVFTWIPAGGLQVDFGLQI 88 RRTD WGHLL A A +G + M+GRD R + + WI AG VD L++ Sbjct 29 RRTDRWGHLLATGLAAVAAVLGIAMWIGMIGRDDASRTVTSGSYRWITAGSFSVDASLRL 88 Query 89 DQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFLASMLLLVVADNYVLLYV 148 DQLSMCFVLLI+ VG+LIHIYS+GYMA+DP RRRFF YLNLF+A+MLLLV+AD+Y+ LY Sbjct 89 DQLSMCFVLLITVVGTLIHIYSIGYMADDPGRRRFFAYLNLFVAAMLLLVLADSYLGLYF 148 Query 149 GWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVGMFLTFSTFGTLSYAGVF 208 GWEGVGLASYLLIGFW HKPSAATAAKKAFVMNRVGD G+ + + + F+TFG++S+ GVF Sbjct 149 GWEGVGLASYLLIGFWQHKPSAATAAKKAFVMNRVGDIGMVIALAIMFATFGSVSFDGVF 208 Query 209 AGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPTPVSALIHAATMVTAGVY 268 +G S A LTAI ++LLGACAKSAQVPLQAWLGDAMEGPTPVSALIHAATMVTAGVY Sbjct 209 SGAAGTSEATLTAICFMLLLGACAKSAQVPLQAWLGDAMEGPTPVSALIHAATMVTAGVY 268 Query 269 LIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRALAASTISQIGYMVLAAG 328 LI RS PL++LAP AQ V+++GAVTLLFGAIIGCAKDDIK+ALAAST+SQIGYMVLAAG Sbjct 269 LITRSAPLFDLAPNAQTGVLVIGAVTLLFGAIIGCAKDDIKKALAASTMSQIGYMVLAAG 328 Query 329 LGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRYGGLRAALPVTFATFGLA 388 LGPAGYAFAIMHLLTHGFFKAGLFLGSG+V+HAM++E DMRRYGGLRA +P+TF TFGL Sbjct 329 LGPAGYAFAIMHLLTHGFFKAGLFLGSGSVMHAMNDETDMRRYGGLRAVMPITFVTFGLG 388 Query 389 YLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAGVTAFYMTRVMLMTFFGE 448 YLAIIGVPPFAGF+SKD IIEAA G GG+RG LLG +LGAG+TAFYMTRVM+MTFFG+ Sbjct 389 YLAIIGVPPFAGFYSKDRIIEAAFGDGGLRGWLLGIVTVLGAGITAFYMTRVMIMTFFGD 448 Query 449 KRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLRHWLQPVVGSHEEATHALPT 508 +RW P + PHEAP MTWPMI+LAVGSV SGGLLA+GGTL +L PVVGS E+ LP Sbjct 449 RRWQPESKPHEAPRSMTWPMIVLAVGSVLSGGLLAIGGTLADFLAPVVGSAPESAGPLPA 508 Query 509 WVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAAARADLYGDAFNEEVFMRPG 568 W T + L VV VG A+A+R YG A +P AP VSALT AARADLYGDAFNE VF PG Sbjct 509 WAITVVVLAVVVVGAAIAWRRYGRAEVPTTAPDDVSALTVAARADLYGDAFNERVFAGPG 568 Query 569 AQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFARNYALSMLVG 619 QLT A+V V+D G+ + V+ S R Q GF R+YALS+L G Sbjct 569 QQLTAALVDVEDRGLGAVPAEIGAGVTALSRVSRGAQNGFVRSYALSILAG 619 >gi|117927487|ref|YP_872038.1| NADH dehydrogenase subunit L [Acidothermus cellulolyticus 11B] gi|117647950|gb|ABK52052.1| NADH dehydrogenase subunit L [Acidothermus cellulolyticus 11B] Length=634 Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/622 (66%), Positives = 485/622 (78%), Gaps = 2/622 (0%) Query 10 TWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQ 69 TWLLVA+PL AA+L+ GGRRTD WGHLLG AA LAAF +G + A LG+ ER++ Sbjct 14 TWLLVAIPLVSAAVLIIGGRRTDGWGHLLGVAAPLAAFVLGVIEFAAFLGKSAAERSLDN 73 Query 70 QVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNL 129 VF W G D GLQ+D LS+ FVLLI+GVGSLIHIYS+GYMA DP RR FFGYLNL Sbjct 74 HVFGWTIVNGFHADIGLQVDALSISFVLLITGVGSLIHIYSIGYMAHDPKRRLFFGYLNL 133 Query 130 FLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLA 189 F+A+MLLLV+ DNY+ LY+GWEGVGLASYLLIGFW +KPSAATAAKKAF++NRVGD GL+ Sbjct 134 FVAAMLLLVLGDNYLALYIGWEGVGLASYLLIGFWSYKPSAATAAKKAFIVNRVGDFGLS 193 Query 190 VGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEG 249 V + L F+TFGT +++GVF V A A L AIGLL+LLGAC KSAQVPLQAWL DAMEG Sbjct 194 VAIMLMFATFGTFTFSGVFGAVHGADSATLNAIGLLLLLGACGKSAQVPLQAWLLDAMEG 253 Query 250 PTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIK 309 PTPVSALIHAATMVTAGVYL+ RS P++N AP+AQLAV +VGAVTLLFGAIIGCAKDDIK Sbjct 254 PTPVSALIHAATMVTAGVYLVARSNPIFNAAPSAQLAVAVVGAVTLLFGAIIGCAKDDIK 313 Query 310 RALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMR 369 +ALAAST+SQIGYM LA GLGPAGY F I HLLTHGFFKAGLFLG+G+V+HA ++E DMR Sbjct 314 KALAASTMSQIGYMTLAVGLGPAGYVFGIAHLLTHGFFKAGLFLGAGSVMHATNDEVDMR 373 Query 370 RYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLG 429 R+GGL +PVTFATFGLAYLAIIG P F+G+F+KDAII+AA GG G LLG AAL+G Sbjct 374 RFGGLARPMPVTFATFGLAYLAIIGFPGFSGWFTKDAIIDAAYHKGGTSGFLLGSAALVG 433 Query 430 AGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLR 489 AG+TAFYM+RV+ MTF G RW+ HPHEAP VMTWPMI+LA+GSV +G +L +G Sbjct 434 AGITAFYMSRVVFMTFTGRPRWSDDVHPHEAPKVMTWPMIVLALGSVGAGYVLMLGNRFA 493 Query 490 HWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAA 549 +L PVVG EE++ P + L + VG+A+A +Y P+P VAP S +T A Sbjct 494 DFLAPVVGRPEESS-VNPGSTPGLVTLAAMVVGVAIAALLYLRRPVPAVAPAG-SPVTVA 551 Query 550 ARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFA 609 AR DLYGDAFNE VFMRPG LT +V D+ G+DG VN LA + TS RLR +QTGF Sbjct 552 ARRDLYGDAFNESVFMRPGQYLTRLLVFFDNKGIDGFVNGLAAFLGGTSGRLRYIQTGFV 611 Query 610 RNYALSMLVGAVLVAAALLVVQ 631 R+YALSML GA ++ AALL+V+ Sbjct 612 RSYALSMLGGAAILVAALLMVR 633 >gi|345001418|ref|YP_004804272.1| proton-translocating NADH-quinone oxidoreductase subunit L [Streptomyces sp. SirexAA-E] gi|344317044|gb|AEN11732.1| proton-translocating NADH-quinone oxidoreductase, chain L [Streptomyces sp. SirexAA-E] Length=644 Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/637 (65%), Positives = 478/637 (76%), Gaps = 21/637 (3%) Query 12 LLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQV 71 LLVA PL GAA+LL GGRR D GH +G A A+F VGA+L DMLG+ +RA+HQ++ Sbjct 7 LLVAAPLLGAAVLLCGGRRLDRSGHWIGTVLAAASFVVGAVLFTDMLGKGAEDRALHQKL 66 Query 72 FTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFL 131 F+WIP G Q D Q+DQLSM FVLLI+GVG+LIHIYS+GYM D RRRFFGYLNLFL Sbjct 67 FSWIPVEGFQADVAFQLDQLSMTFVLLITGVGTLIHIYSIGYMEHDERRRRFFGYLNLFL 126 Query 132 ASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVG 191 A+ML+LV+ADNY+LLYVGWEGVGLASYLLIGFW HKPSAATAAKKAF++NRVGD GL++ Sbjct 127 AAMLILVIADNYLLLYVGWEGVGLASYLLIGFWQHKPSAATAAKKAFLVNRVGDIGLSIA 186 Query 192 MFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPT 251 + L F+TFGT ++ V S LTAIGL++LL AC KSAQVPLQ+WLGDAMEGPT Sbjct 187 IMLMFTTFGTFAFGPVLEATGDTSEGKLTAIGLMLLLAACGKSAQVPLQSWLGDAMEGPT 246 Query 252 PVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRA 311 PVSALIHAATMVTAGVYLIVRSG ++N AP AQL V IVGAVTLLFGAI+GCAKDDIK+A Sbjct 247 PVSALIHAATMVTAGVYLIVRSGAIFNAAPDAQLVVTIVGAVTLLFGAIVGCAKDDIKKA 306 Query 312 LAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRY 371 LA ST+SQIGYM+LAAGLGP GY FAIMHL+THGFFKAGLFLG+G+V+H M++E DMRRY Sbjct 307 LAGSTMSQIGYMILAAGLGPIGYVFAIMHLVTHGFFKAGLFLGAGSVMHGMNDEVDMRRY 366 Query 372 GGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAG 431 GGLR +PVTF TFGL YLAIIG P +GFFSKD IIEAA GG G +LG ALLGA Sbjct 367 GGLRKYMPVTFVTFGLGYLAIIGFPGLSGFFSKDKIIEAAFAKGGTEGWILGSVALLGAA 426 Query 432 VTAFYMTRVMLMTFFGEKRW----TPG--------------AHPHEAPAVMTWPMILLAV 473 +TAFYMTRVMLMTFFGE+RW TP HPHE+P MT PMI+LA Sbjct 427 ITAFYMTRVMLMTFFGEERWRHAATPSPDEPDVEPAAATGEPHPHESPKSMTIPMIVLAF 486 Query 474 GSVFSGGLLAVGGTLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTA 533 GSVF+GGL +VG HWL+PV G H+ + T + V+ +G+AVA+ MYG Sbjct 487 GSVFAGGLFSVGDRFLHWLEPVTG-HDHGHAPVSATTVTAATMVVLVIGVAVAWAMYGRK 545 Query 534 PIPRVAPVRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATL 593 P+P VAP R S LT AAR DL D FN V +R G LT ++V VD VDG VN A Sbjct 546 PVPAVAP-RGSLLTRAARRDLLQDDFNHVVLVRGGEHLTRSLVYVDHTLVDGVVNGTAAS 604 Query 594 VSQTSNRLRQMQTGFARNYALSMLVG-AVLVAAALLV 629 + S RLR++Q G+AR+YA+SM G AVL+AA LL+ Sbjct 605 MGGLSGRLRKLQNGYARSYAVSMFGGTAVLIAATLLM 641 >gi|302536179|ref|ZP_07288521.1| NADH-quinone oxidoreductase subunit L [Streptomyces sp. C] gi|302445074|gb|EFL16890.1| NADH-quinone oxidoreductase subunit L [Streptomyces sp. C] Length=631 Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/624 (65%), Positives = 479/624 (77%), Gaps = 8/624 (1%) Query 12 LLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQV 71 LLVA PL GAA+LL GGRR D GH +G A +F +G +L ADMLGR +RA+HQ++ Sbjct 7 LLVAAPLLGAAVLLCGGRRLDKAGHWIGTLLAAVSFAIGVVLFADMLGRGAEDRALHQRL 66 Query 72 FTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFL 131 F+W+P G Q D Q+DQLSM FVLLISGVG+LIH+YS+GYM D RRRFFGYLNLF+ Sbjct 67 FSWVPVEGFQADVAFQLDQLSMTFVLLISGVGTLIHVYSIGYMEHDERRRRFFGYLNLFV 126 Query 132 ASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVG 191 A+MLLLV+ADNY+LLY GWEGVGLASYLLIGFW HKPSAATAAKKAF++NRVGD GL++ Sbjct 127 AAMLLLVLADNYLLLYFGWEGVGLASYLLIGFWQHKPSAATAAKKAFLVNRVGDIGLSIA 186 Query 192 MFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPT 251 + L F+TFGT ++ V A V LTAIGL++LL AC KSAQVPLQ+WLGDAMEGPT Sbjct 187 IMLMFTTFGTFAFGPVLASVGETGEGTLTAIGLMLLLAACGKSAQVPLQSWLGDAMEGPT 246 Query 252 PVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRA 311 PVSALIHAATMVTAGVYLIVRSG ++N AP AQL +VGAVTLLFGAI+GCAKDDIK+A Sbjct 247 PVSALIHAATMVTAGVYLIVRSGAIFNGAPDAQLVTTVVGAVTLLFGAIVGCAKDDIKKA 306 Query 312 LAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRY 371 LA ST+SQIGYM+LAAGLGP GY FAIMHL+THGFFKAGLFLG+G+V+H M++E DMR+Y Sbjct 307 LAGSTMSQIGYMILAAGLGPIGYVFAIMHLVTHGFFKAGLFLGAGSVMHGMNDEVDMRKY 366 Query 372 GGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAG 431 G LR +PVTF TFGL YLAIIG P +GFFSKD IIEAA GG +G +LGG ALLGAG Sbjct 367 GALRTYMPVTFVTFGLGYLAIIGFPGLSGFFSKDMIIEAAFAKGGTQGWILGGVALLGAG 426 Query 432 VTAFYMTRVMLMTFFGEKRWTPGA-----HPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 +TAFYMTRVML+TFFGEKRW P A HPHE+P MT PMI+LA GSVF+GG +G Sbjct 427 ITAFYMTRVMLLTFFGEKRWQPDAEGHEPHPHESPKSMTIPMIILAFGSVFAGGFFEIGE 486 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSAL 546 +WL+PV G +E + T + V+ VG+A+A+ MYG P+P VAP R S L Sbjct 487 RFLNWLEPVTG-YEHGHPPVSAAAVTASTMVVLVVGVAIAWSMYGRRPVPVVAP-RGSFL 544 Query 547 TAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQT 606 T AAR DL+ D FN V +R G LT ++V +D + VDG+VN A V S RLR++Q Sbjct 545 TRAARRDLFQDDFNHVVLVRGGEHLTRSLVYLDHSVVDGAVNGTAASVGGLSGRLRKLQN 604 Query 607 GFARNYALSMLVG-AVLVAAALLV 629 G+AR+YA+SM G A+L+AA LL+ Sbjct 605 GYARSYAVSMFGGTAILIAATLLM 628 >gi|320009193|gb|ADW04043.1| proton-translocating NADH-quinone oxidoreductase, chain L [Streptomyces flavogriseus ATCC 33331] Length=631 Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/624 (65%), Positives = 475/624 (77%), Gaps = 8/624 (1%) Query 12 LLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQV 71 LLVA PL GAA+LL GGRR D GH +G A A+F VGA+L DMLG+ +R + Q + Sbjct 7 LLVAAPLLGAAVLLCGGRRLDRAGHWIGTVLAAASFVVGAVLFTDMLGKGAEDRTLRQHL 66 Query 72 FTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFL 131 ++WIP G Q D Q+DQLSM FVLLI+GVG+LIHIYS+GYM D RRRFFGYLNLFL Sbjct 67 YSWIPVEGFQADVAFQLDQLSMTFVLLITGVGTLIHIYSIGYMEHDERRRRFFGYLNLFL 126 Query 132 ASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVG 191 A+ML+LV+ADNY+LLYVGWEGVGLASYLLIGFW HKPSAATAAKKAF++NRVGD GL++ Sbjct 127 AAMLILVIADNYLLLYVGWEGVGLASYLLIGFWQHKPSAATAAKKAFLVNRVGDIGLSIA 186 Query 192 MFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPT 251 + L F+TFGT ++ VF S LTAIGL++LL AC KSAQVPLQ+WLGDAMEGPT Sbjct 187 IMLMFTTFGTFAFGPVFEATGDTSEGKLTAIGLMLLLAACGKSAQVPLQSWLGDAMEGPT 246 Query 252 PVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRA 311 PVSALIHAATMVTAGVYLIVRSG ++N AP AQL VV+VGAVTLLFGAI+GCAKDDIK+A Sbjct 247 PVSALIHAATMVTAGVYLIVRSGAVFNGAPDAQLVVVVVGAVTLLFGAIVGCAKDDIKKA 306 Query 312 LAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRY 371 LA ST+SQIGYM+LAAGLGP GY FAIMHL+THGFFKAGLFLG+G+V+H M++E DMRRY Sbjct 307 LAGSTMSQIGYMILAAGLGPIGYVFAIMHLVTHGFFKAGLFLGAGSVMHGMNDEVDMRRY 366 Query 372 GGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAG 431 GGLR +PVTF TFGL YLAIIG P +GFFSKD IIEAA GG G +LG LLGA Sbjct 367 GGLRKFMPVTFVTFGLGYLAIIGFPGLSGFFSKDMIIEAAFAKGGTEGWILGSVTLLGAA 426 Query 432 VTAFYMTRVMLMTFFGEKRWTPGA-----HPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 +TAFYMTRVMLMTFFGEKRW P A HPHE+P MT PMI+LA GSVF+GG ++G Sbjct 427 ITAFYMTRVMLMTFFGEKRWQPDAEGHEPHPHESPKSMTIPMIVLAFGSVFAGGFFSLGD 486 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSAL 546 HWL+PV G H+ + T + V+ +G+A+A+ MYG P+P VAP R S L Sbjct 487 RFLHWLEPVTG-HDHGHAPVSAATVTAATMVVLVIGVAIAWAMYGRRPVPAVAP-RGSLL 544 Query 547 TAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQT 606 T AAR DL D FN V +R G LT ++V VD VDG VN A + S RLR++Q Sbjct 545 TRAARRDLLQDDFNHVVLVRGGEHLTRSLVYVDHTLVDGVVNGTAASMGGLSGRLRKLQN 604 Query 607 GFARNYALSMLVG-AVLVAAALLV 629 G+AR+YA+SM G AVL+AA LL+ Sbjct 605 GYARSYAVSMFGGAAVLIAATLLM 628 >gi|239989941|ref|ZP_04710605.1| NADH dehydrogenase subunit L [Streptomyces roseosporus NRRL 11379] gi|291446958|ref|ZP_06586348.1| NADH dehydrogenase subunit L [Streptomyces roseosporus NRRL 15998] gi|291349905|gb|EFE76809.1| NADH dehydrogenase subunit L [Streptomyces roseosporus NRRL 15998] Length=631 Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/627 (65%), Positives = 477/627 (77%), Gaps = 11/627 (1%) Query 12 LLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQV 71 LLVA PL GAA+LL GGRR D GH LG A A A+FGVG +L DMLG+ +RA+HQ + Sbjct 7 LLVAAPLLGAAVLLCGGRRLDKTGHWLGTALAAASFGVGLILFTDMLGKGAEDRALHQHL 66 Query 72 FTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFL 131 F+WIP G Q D Q+DQLSM FVLLI+GVG+LIHIYS+GYM D RRRFFGYLNLFL Sbjct 67 FSWIPVEGFQADIAFQLDQLSMTFVLLITGVGTLIHIYSIGYMEHDERRRRFFGYLNLFL 126 Query 132 ASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVG 191 A+ML+LV+ADNY+LLYVGWEGVGLAS+LLIGFW HKP+AATAAKKAF++NRVGD GL++ Sbjct 127 AAMLILVIADNYLLLYVGWEGVGLASFLLIGFWQHKPTAATAAKKAFLVNRVGDMGLSIA 186 Query 192 MFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPT 251 + L F+TFGT ++ V S+ LTAIGL++LL AC KSAQVPLQ+WLGDAMEGPT Sbjct 187 IMLMFTTFGTFAFGPVLESAGETSQGKLTAIGLMLLLAACGKSAQVPLQSWLGDAMEGPT 246 Query 252 PVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRA 311 PVSALIHAATMVTAGVYLIVRSG ++N AP AQL VVIVGAVTL+FGAI+GCAKDDIK+A Sbjct 247 PVSALIHAATMVTAGVYLIVRSGAIFNAAPDAQLVVVIVGAVTLIFGAIVGCAKDDIKKA 306 Query 312 LAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRY 371 LA ST+SQIGYM+LAAGLGP GY FAIMHL+THGFFKAGLFLG+G+V+H M++E DMR+Y Sbjct 307 LAGSTMSQIGYMILAAGLGPIGYIFAIMHLVTHGFFKAGLFLGAGSVMHGMNDEVDMRKY 366 Query 372 GGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAG 431 GGLR +PVTF TFGL YLAIIG P +GFFSKD IIEAA GG G +LG ALLGA Sbjct 367 GGLRKYMPVTFITFGLGYLAIIGFPGLSGFFSKDKIIEAAFAKGGTEGWILGSVALLGAA 426 Query 432 VTAFYMTRVMLMTFFGEKRWTPGA-----HPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 +TAFYMTRVMLMTFFGEKRW P A HPHE+P MT PMI+LA GSVF+GG A+G Sbjct 427 ITAFYMTRVMLMTFFGEKRWQPDADGHEPHPHESPKSMTIPMIVLAFGSVFAGGFFAIGD 486 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVA--VGIAVAYRMYGTAPIPRVAPVRVS 544 +WL+PV G + P AT VVA VG+ +A+ MYG P+P VAP R S Sbjct 487 RFVNWLEPVTGYDHGHS---PLSAATVTGATVVALVVGVGIAWAMYGRKPVPLVAP-RGS 542 Query 545 ALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQM 604 LT AAR DL D FN V +R G LT ++V VD + VDG VN A V S R+R++ Sbjct 543 VLTRAARRDLLQDDFNHVVLVRGGEHLTRSLVYVDHSLVDGVVNGTAASVGGLSGRMRKL 602 Query 605 QTGFARNYALSMLVGAVLVAAALLVVQ 631 Q G+AR YA+SM G +V AA L+++ Sbjct 603 QNGYARTYAVSMFGGTAVVIAATLLMR 629 >gi|326777361|ref|ZP_08236626.1| proton-translocating NADH-quinone oxidoreductase, chain L [Streptomyces cf. griseus XylebKG-1] gi|326657694|gb|EGE42540.1| proton-translocating NADH-quinone oxidoreductase, chain L [Streptomyces griseus XylebKG-1] Length=631 Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/627 (65%), Positives = 475/627 (76%), Gaps = 11/627 (1%) Query 12 LLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQV 71 LLVA PL GAA+LL GGRR D GH LG A A+F VG +L DMLG+D RA+HQ + Sbjct 7 LLVAAPLLGAAVLLCGGRRLDKTGHWLGTVLAGASFVVGLILFTDMLGKDPENRALHQHL 66 Query 72 FTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFL 131 F+WIP G Q D Q+DQLSM FVLLI+GVG+LIHIYS+GYM D RRRFFGYLNLFL Sbjct 67 FSWIPVEGFQADIAFQLDQLSMTFVLLITGVGTLIHIYSIGYMEHDERRRRFFGYLNLFL 126 Query 132 ASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVG 191 A+ML+LV+ADNY+LLYVGWEGVGLAS+LLIGFW HKP+AATAAKKAF++NRVGD GL++ Sbjct 127 AAMLILVIADNYLLLYVGWEGVGLASFLLIGFWQHKPTAATAAKKAFLVNRVGDMGLSIA 186 Query 192 MFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPT 251 + L F+TFGT ++ V S+ LTAIGL++LL AC KSAQVPLQ+WLGDAMEGPT Sbjct 187 IMLMFTTFGTFAFGPVLESAGETSQGKLTAIGLMLLLAACGKSAQVPLQSWLGDAMEGPT 246 Query 252 PVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRA 311 PVSALIHAATMVTAGVYLIVRSG ++N AP AQL VVIVGAVTL+FGAI+GCAKDDIK+A Sbjct 247 PVSALIHAATMVTAGVYLIVRSGAIFNAAPDAQLVVVIVGAVTLIFGAIVGCAKDDIKKA 306 Query 312 LAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRY 371 LA ST+SQIGYM+LAAGLGP GY FAIMHL+THGFFKAGLFLG+G+V+H M++E DMR+Y Sbjct 307 LAGSTMSQIGYMILAAGLGPIGYIFAIMHLVTHGFFKAGLFLGAGSVMHGMNDEVDMRKY 366 Query 372 GGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAG 431 GGLR +PVTF TFGL YLAIIG P +GFFSKD IIEAA GG G +LG ALLGA Sbjct 367 GGLRKYMPVTFVTFGLGYLAIIGFPGLSGFFSKDKIIEAAFAKGGTEGWILGSVALLGAA 426 Query 432 VTAFYMTRVMLMTFFGEKRWTPGA-----HPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 +TAFYMTRVMLMTFFGEKRW P A HPHE+P MT PMI+LA GSVF+GG A+G Sbjct 427 ITAFYMTRVMLMTFFGEKRWQPDAEGHEPHPHESPKSMTIPMIVLAFGSVFAGGFFAIGD 486 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVA--VGIAVAYRMYGTAPIPRVAPVRVS 544 +WL+PV G + P AT VVA VG+ +A+ MYG P+P VAP R S Sbjct 487 RFVNWLEPVTGYDHGHS---PLSAATVTGATVVALVVGVGIAWAMYGRKPVPLVAP-RGS 542 Query 545 ALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQM 604 LT AAR DL D FN V +R G LT ++V VD + VDG VN A V S RLR+M Sbjct 543 VLTRAARRDLLQDDFNHVVLVRGGEHLTRSLVYVDHSLVDGVVNGTAASVGGLSGRLRRM 602 Query 605 QTGFARNYALSMLVGAVLVAAALLVVQ 631 Q G+AR YA+SM G +V AA L+++ Sbjct 603 QNGYARTYAVSMFGGTAVVIAATLLMR 629 >gi|182436766|ref|YP_001824485.1| NADH dehydrogenase subunit L [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465282|dbj|BAG19802.1| putative NADH dehydrogenase chain L [Streptomyces griseus subsp. griseus NBRC 13350] Length=631 Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/627 (65%), Positives = 475/627 (76%), Gaps = 11/627 (1%) Query 12 LLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQV 71 LLVA PL GAA+LL GGRR D GH LG A A+F VG +L DMLG+D RA+HQ + Sbjct 7 LLVAAPLLGAAVLLCGGRRLDKTGHWLGTVLAGASFVVGLILFTDMLGKDPENRALHQHL 66 Query 72 FTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFL 131 F+WIP G Q D Q+DQLSM FVLLI+GVG+LIHIYS+GYM D RRRFFGYLNLFL Sbjct 67 FSWIPVEGFQADIAFQLDQLSMTFVLLITGVGTLIHIYSIGYMEHDERRRRFFGYLNLFL 126 Query 132 ASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVG 191 A+ML+LV+ADNY+LLYVGWEGVGLAS+LLIGFW HKP+AATAAKKAF++NRVGD GL++ Sbjct 127 AAMLILVIADNYLLLYVGWEGVGLASFLLIGFWQHKPTAATAAKKAFLVNRVGDMGLSIA 186 Query 192 MFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPT 251 + L F+TFGT ++ V S+ LTAIGL++LL AC KSAQVPLQ+WLGDAMEGPT Sbjct 187 IMLMFTTFGTFAFGPVLESAGETSQGKLTAIGLMLLLAACGKSAQVPLQSWLGDAMEGPT 246 Query 252 PVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRA 311 PVSALIHAATMVTAGVYLIVRSG ++N AP AQL VVIVGAVTL+FGAI+GCAKDDIK+A Sbjct 247 PVSALIHAATMVTAGVYLIVRSGAIFNAAPDAQLVVVIVGAVTLIFGAIVGCAKDDIKKA 306 Query 312 LAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRY 371 LA ST+SQIGYM+LAAGLGP GY FAIMHL+THGFFKAGLFLG+G+V+H M++E DMR+Y Sbjct 307 LAGSTMSQIGYMILAAGLGPIGYIFAIMHLVTHGFFKAGLFLGAGSVMHGMNDEVDMRKY 366 Query 372 GGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAG 431 GGLR +PVTF TFGL YLAIIG P +GFFSKD IIEAA GG G +LG ALLGA Sbjct 367 GGLRKYMPVTFVTFGLGYLAIIGFPGLSGFFSKDKIIEAAFAKGGAEGWILGSVALLGAA 426 Query 432 VTAFYMTRVMLMTFFGEKRWTPGA-----HPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 +TAFYMTRVMLMTFFGEKRW P A HPHE+P MT PMI+LA GSVF+GG A+G Sbjct 427 ITAFYMTRVMLMTFFGEKRWQPDAEGHEPHPHESPKSMTVPMIVLAFGSVFAGGFFAIGD 486 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVA--VGIAVAYRMYGTAPIPRVAPVRVS 544 +WL+PV G + P AT VVA VG+ +A+ MYG P+P VAP R S Sbjct 487 RFVNWLEPVTGYDHGHS---PLSAATVTGATVVALVVGVGIAWAMYGRKPVPLVAP-RGS 542 Query 545 ALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQM 604 LT AAR DL D FN V +R G LT ++V VD + VDG VN A V S RLR+M Sbjct 543 VLTRAARRDLLQDDFNHVVLVRGGEHLTRSLVYVDHSLVDGVVNGTAASVGGLSGRLRRM 602 Query 605 QTGFARNYALSMLVGAVLVAAALLVVQ 631 Q G+AR YA+SM G +V AA L+++ Sbjct 603 QNGYARTYAVSMFGGTAVVIAATLLMR 629 >gi|297192776|ref|ZP_06910174.1| NADH dehydrogenase subunit L [Streptomyces pristinaespiralis ATCC 25486] gi|297151489|gb|EDY64943.2| NADH dehydrogenase subunit L [Streptomyces pristinaespiralis ATCC 25486] Length=635 Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/633 (64%), Positives = 472/633 (75%), Gaps = 26/633 (4%) Query 20 GAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQVFTWIPAGG 79 GAA+LL GGRR D GH LG A A+F VGA+L DMLG+ ERA+HQ++F+WIP G Sbjct 3 GAAVLLCGGRRLDGSGHWLGTLLAAASFVVGAVLFVDMLGKGAEERALHQKLFSWIPVEG 62 Query 80 LQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFLASMLLLVV 139 Q D Q+DQLSM FVLLI+GVG+LIHIYS+GYM D RRRFFGYLNLFLA+MLLLVV Sbjct 63 FQADIAFQLDQLSMTFVLLITGVGTLIHIYSIGYMEHDERRRRFFGYLNLFLAAMLLLVV 122 Query 140 ADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVGMFLTFSTF 199 ADNY+LLYVGWEGVGLASYLLIGFW HKPSAATAAKKAF++NRVGD GL++ + L F+TF Sbjct 123 ADNYLLLYVGWEGVGLASYLLIGFWQHKPSAATAAKKAFLVNRVGDMGLSIAIMLMFTTF 182 Query 200 GTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPTPVSALIHA 259 GT ++ V A S +LTAIGL++LL AC KSAQVPLQ+WLGDAMEGPTPVSALIHA Sbjct 183 GTFAFGPVLAATEETSEGMLTAIGLMLLLAACGKSAQVPLQSWLGDAMEGPTPVSALIHA 242 Query 260 ATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRALAASTISQ 319 ATMVTAGVYLIVRSG ++N AP AQLAVVIVGAVTLLFGAI+GCAKDDIK+ALA ST+SQ Sbjct 243 ATMVTAGVYLIVRSGAIFNAAPDAQLAVVIVGAVTLLFGAIVGCAKDDIKKALAGSTMSQ 302 Query 320 IGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRYGGLRAALP 379 IGYMVLAAGLGP GYAFAIMHL+THGFFKAGLFLG+G+V+H M++E DMR+YGGLR +P Sbjct 303 IGYMVLAAGLGPIGYAFAIMHLVTHGFFKAGLFLGAGSVMHGMNDEVDMRKYGGLRKYMP 362 Query 380 VTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALG-AGGIRGSLLGGAALLGAGVTAFYMT 438 +TF TFGL YLAIIG P +GF+SKD IIEAA GIRG + GG ALLGAG+TAFYMT Sbjct 363 ITFVTFGLGYLAIIGFPGLSGFWSKDKIIEAAFAYDDGIRGWIFGGVALLGAGITAFYMT 422 Query 439 RVMLMTFFGEKRWTPG--------------------AHPHEAPAVMTWPMILLAVGSVFS 478 RVM+MTFFGEKRW P HPHE+P MT PMI+LA GSVF+ Sbjct 423 RVMIMTFFGEKRWQPAPDADKAASAEPAAESHAGEMPHPHESPRSMTIPMIVLAFGSVFA 482 Query 479 GGLLAVGGTLRHWLQPVVG-SHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPR 537 G ++G +WL PV H ++P TT + V+ G +AY MYG P+P Sbjct 483 GAFFSIGDRFANWLAPVTEFEHPHPVISVPA--ITTATMVVLLAGALIAYLMYGRRPVPV 540 Query 538 VAPVRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQT 597 AP R S LT AAR DL D FN V +R G LT ++V VD + VDG VN A Sbjct 541 TAP-RGSLLTRAARRDLLQDDFNHVVLVRGGEHLTRSLVYVDHSLVDGVVNGTAASFGGL 599 Query 598 SNRLRQMQTGFARNYALSMLVG-AVLVAAALLV 629 S RLR++Q G+AR+YA+SM G A+L+AA LL+ Sbjct 600 SGRLRKLQNGYARSYAVSMFGGTAILIAATLLM 632 >gi|262200410|ref|YP_003271618.1| proton-translocating NADH-quinone oxidoreductase, chain L [Gordonia bronchialis DSM 43247] gi|262083757|gb|ACY19725.1| proton-translocating NADH-quinone oxidoreductase, chain L [Gordonia bronchialis DSM 43247] Length=649 Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/628 (66%), Positives = 498/628 (80%), Gaps = 16/628 (2%) Query 21 AAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQVFTWIPAGGL 80 A +LL GR +D WGHLLG A ALA+F +G ++ ML R ERA+ +FTWIP L Sbjct 21 AVVLLIAGRGSDRWGHLLGTALALASFVLGLVMFVGMLSRSTDERAVSHTLFTWIPVAEL 80 Query 81 QVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFLASMLLLVVA 140 VDFG Q+DQLSMCFVLLI+G+GSLIH+YS+GYMA+DPDRRRFF YLNLFLA+ML+LV+A Sbjct 81 HVDFGFQLDQLSMCFVLLITGIGSLIHVYSIGYMADDPDRRRFFAYLNLFLAAMLVLVLA 140 Query 141 DNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVGMFLTFSTFG 200 DNY+ LY+GWEGVGLASYLLIGFW +KPSAATAAKKAFV+NRVGD GLA+ + + F+TFG Sbjct 141 DNYLGLYLGWEGVGLASYLLIGFWQYKPSAATAAKKAFVVNRVGDIGLAIALMIMFATFG 200 Query 201 TLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPTPVSALIHAA 260 +S+ VF G A LTA+G ++LL AC KSAQVPLQ+WLGDAMEGPTPVSALIHAA Sbjct 201 AVSFTAVFDGAGQAGETTLTALGFMLLLAACGKSAQVPLQSWLGDAMEGPTPVSALIHAA 260 Query 261 TMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRALAASTISQI 320 TMVTAGVYLIVRSGP+++LAP AQ+ VV+VGAVTLLFGAIIGCAKDDIK+ALAAST+SQI Sbjct 261 TMVTAGVYLIVRSGPIFDLAPHAQVGVVVVGAVTLLFGAIIGCAKDDIKKALAASTMSQI 320 Query 321 GYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRYGGLRAALPV 380 GYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLG+G+V+H M++E DMRRYGGLR +P+ Sbjct 321 GYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGAGSVMHGMNDETDMRRYGGLRKLMPI 380 Query 381 TFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAGVTAFYMTRV 440 TF TFG+ YLAIIGVPPFAGF+SKD IIE A +GG++G LLGGAALLGAG+TAFYMTRV Sbjct 381 TFITFGVGYLAIIGVPPFAGFYSKDHIIEVAFASGGVKGLLLGGAALLGAGITAFYMTRV 440 Query 441 MLMTFFGEKRW-----TPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLRHWLQPV 495 +++TFFGEKRW P HPHE+P+VMT PM+L+A+GSV SG LA GG L HWL+PV Sbjct 441 VILTFFGEKRWHDGTDAPAPHPHESPSVMTAPMVLIAIGSVASGFFLAFGGALEHWLEPV 500 Query 496 VGSHEEAT--------HA---LPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVS 544 V + EA+ HA +P W T + L VVAVG+ +AY Y T +P +AP VS Sbjct 501 VAAGSEASGAGVTGEDHAELGIPVWAMTVIILVVVAVGVGIAYWQYATRAVPEIAPDDVS 560 Query 545 ALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQM 604 ALT AAR DLYGDA NE + MRPG +T +V V+++GVDG + + ++ S R+R Sbjct 561 ALTVAARRDLYGDAANEALLMRPGQHVTAGLVEVENSGVDGLTSGVGAGIAGLSERIRGW 620 Query 605 QTGFARNYALSMLVGAVLVAAALLVVQL 632 Q+G+ R+YALSM GA ++ A ++VV + Sbjct 621 QSGYVRSYALSMFAGAAVITALVMVVNV 648 >gi|169629231|ref|YP_001702880.1| NADH dehydrogenase subunit L [Mycobacterium abscessus ATCC 19977] gi|169241198|emb|CAM62226.1| NADH-quinone oxidoreductase, L subunit NuoL [Mycobacterium abscessus] Length=621 Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/607 (70%), Positives = 494/607 (82%), Gaps = 3/607 (0%) Query 10 TWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQ 69 TWL+ ALPLAGAA+LL GRR DA GHL+GCAA+L +F V + MLGR G +R +H+ Sbjct 2 TWLMPALPLAGAAVLLLVGRRGDARGHLVGCAASLGSFLVAVVAFLGMLGRAGPDRVMHE 61 Query 70 QVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNL 129 +F W+P GGL +DFGL +DQLS+CF LLI+GVGSLIH+YS+GYMA DPDRRRFFGYLNL Sbjct 62 VLFNWVPVGGLHIDFGLTLDQLSVCFALLITGVGSLIHVYSIGYMAHDPDRRRFFGYLNL 121 Query 130 FLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLA 189 FLA+MLLLV+ADN++ LY+GWEGVGLASYLLIGFWY KPSAA AAKKAF++NRVGD GLA Sbjct 122 FLAAMLLLVLADNFLGLYLGWEGVGLASYLLIGFWYQKPSAAAAAKKAFIVNRVGDMGLA 181 Query 190 VGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEG 249 + M L FSTFG++ +A V AA + TAIGL +LL AC KSAQVPLQ+WLGDAMEG Sbjct 182 LAMMLMFSTFGSVGFAQVLGSASAAGESRNTAIGLALLLAACGKSAQVPLQSWLGDAMEG 241 Query 250 PTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIK 309 PTPVSALIHAATMVTAGVYLI RSGP++ AP AQ+AVV+VGAVTLLFGAIIGCAKDDIK Sbjct 242 PTPVSALIHAATMVTAGVYLITRSGPIFEHAPYAQVAVVLVGAVTLLFGAIIGCAKDDIK 301 Query 310 RALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMR 369 +ALAAST+SQIGYMVLAAGLGPAGYA AIMHLLTHGFFKAGLFLG+G+V+H M+EE DMR Sbjct 302 KALAASTMSQIGYMVLAAGLGPAGYAVAIMHLLTHGFFKAGLFLGAGSVMHGMNEETDMR 361 Query 370 RYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLG 429 RYGGLRA +P+TF TFGL YLAIIGVPPFAGF+SKD IIE A G GG G LLG AAL G Sbjct 362 RYGGLRAVMPITFVTFGLGYLAIIGVPPFAGFYSKDKIIEVAFGHGGAGGFLLGAAALSG 421 Query 430 AGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLR 489 AG+TAFYMTRVML+TFFG++RW HPHE+P+VMTWPM++LAVGSV +G LL++GG L+ Sbjct 422 AGITAFYMTRVMLLTFFGKRRWHRDVHPHESPSVMTWPMLVLAVGSVAAGFLLSLGGALQ 481 Query 490 HWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAA 549 +WL PVVG H +P WV + + + VV G +AYR+Y A +P AP + S LT A Sbjct 482 NWLAPVVGMH-HGELPVPGWVISAITVAVVLCGAGIAYRIY-RADVPETAP-QGSTLTVA 538 Query 550 ARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFA 609 AR DLYGDAFNE VFMRPG +LT +V VDD VDG VN +A+++ S +RQ+QTG Sbjct 539 ARRDLYGDAFNEAVFMRPGQRLTRGMVLVDDRAVDGMVNGVASILGAVSGWVRQLQTGHV 598 Query 610 RNYALSM 616 R+YALSM Sbjct 599 RSYALSM 605 >gi|254391148|ref|ZP_05006355.1| NADH-quinone oxidoreductase subunit L [Streptomyces clavuligerus ATCC 27064] gi|294814405|ref|ZP_06773048.1| NADH-quinone oxidoreductase subunit L [Streptomyces clavuligerus ATCC 27064] gi|326442795|ref|ZP_08217529.1| NADH:ubiquinone oxidoreductase subunit L [Streptomyces clavuligerus ATCC 27064] gi|197704842|gb|EDY50654.1| NADH-quinone oxidoreductase subunit L [Streptomyces clavuligerus ATCC 27064] gi|294327004|gb|EFG08647.1| NADH-quinone oxidoreductase subunit L [Streptomyces clavuligerus ATCC 27064] Length=634 Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/626 (65%), Positives = 478/626 (77%), Gaps = 12/626 (1%) Query 12 LLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQV 71 LL+ PL GAA+LL GGRR D GH +G A A A+F +GA+L DMLGR ER +HQ++ Sbjct 10 LLIGAPLLGAAVLLCGGRRLDRAGHWIGTALAGASFAIGAVLFLDMLGRSADERTLHQKL 69 Query 72 FTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFL 131 F+WIP G Q D Q+DQLSM FVLLI+GVG+LIH+YS+GYM D RRRFFGYLNLFL Sbjct 70 FSWIPVEGFQADVAFQLDQLSMTFVLLITGVGTLIHVYSIGYMEHDERRRRFFGYLNLFL 129 Query 132 ASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVG 191 A+MLLLV+ADNY+LLY GWEGVGLASYLLIGFW HKPSAATAAKKAF++NRVGD GL++ Sbjct 130 AAMLLLVLADNYLLLYFGWEGVGLASYLLIGFWQHKPSAATAAKKAFLVNRVGDIGLSIA 189 Query 192 MFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPT 251 + L F+TFGT ++ V V LTAIGL++LL AC KSAQVPLQ+WLGDAMEGPT Sbjct 190 IMLMFTTFGTFAFGPVLGSVDETGEGRLTAIGLMLLLAACGKSAQVPLQSWLGDAMEGPT 249 Query 252 PVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRA 311 PVSALIHAATMVTAGVYLIVRSG ++N AP AQLAVV+VGAVTLLFGAI+GCAKDDIK+A Sbjct 250 PVSALIHAATMVTAGVYLIVRSGAIFNAAPDAQLAVVVVGAVTLLFGAIVGCAKDDIKKA 309 Query 312 LAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRY 371 LA ST+SQIGYM+LAAGLGP GY FAIMHL+THGFFKAGLFLG+G+V+H M++E DMR+Y Sbjct 310 LAGSTMSQIGYMILAAGLGPIGYVFAIMHLVTHGFFKAGLFLGAGSVMHGMNDEVDMRKY 369 Query 372 GGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAG 431 GGLR +PVTF TFGL YLAIIG P +GFFSKD IIEAA GG G +LG ALLGA Sbjct 370 GGLRTYMPVTFITFGLGYLAIIGFPGLSGFFSKDKIIEAAFAKGGTEGWILGSVALLGAA 429 Query 432 VTAFYMTRVMLMTFFGEKRWTPGA-----HPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 +TAFYMTRVM++TFFGEKRW P A HPHE+P MT PM++LA GSVF+GGL ++G Sbjct 430 ITAFYMTRVMVLTFFGEKRWQPDARGELPHPHESPKSMTIPMVILAFGSVFAGGLFSIGD 489 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVA--VGIAVAYRMYGTAPIPRVAPVRVS 544 WL+PV G+ E H P AT A VVA +G+++A+ MYG P+P V P R S Sbjct 490 RFLTWLEPVTGA--EHGHP-PISAATVTASTVVALLIGVSIAWAMYGRRPVP-VTPPRGS 545 Query 545 ALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQM 604 LT AAR DL D FN V +R G LT ++V VD VDG VN A V S RLR++ Sbjct 546 LLTRAARRDLLQDDFNHVVLVRGGEHLTRSLVYVDHTLVDGVVNGTAASVGGLSGRLRKL 605 Query 605 QTGFARNYALSMLVG-AVLVAAALLV 629 Q G+ R+YA+SM G AVL+AA LL+ Sbjct 606 QNGYVRSYAVSMFGGTAVLIAATLLM 631 >gi|328884323|emb|CCA57562.1| NADH-ubiquinone oxidoreductase chain L [Streptomyces venezuelae ATCC 10712] Length=630 Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/625 (64%), Positives = 467/625 (75%), Gaps = 11/625 (1%) Query 12 LLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQV 71 LL+A PL GA +LL GGRR D GH +G A +F +G L ADMLG+ +RA+HQ++ Sbjct 7 LLIAAPLLGAVVLLCGGRRLDKAGHWIGTLLAAVSFAIGLALFADMLGKGAEDRALHQRL 66 Query 72 FTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFL 131 F+WIP G Q D Q+DQLSM FVLLISGVG+LIH+YS+GYM D RRRFFGYLNLF+ Sbjct 67 FSWIPVEGFQADIAFQLDQLSMTFVLLISGVGTLIHVYSIGYMEHDERRRRFFGYLNLFV 126 Query 132 ASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVG 191 A+MLLLV+ADNY+LLY GWEGVGLASYLLIGFW HKPSAATAAKKAF++NRVGD GL++ Sbjct 127 AAMLLLVLADNYLLLYFGWEGVGLASYLLIGFWQHKPSAATAAKKAFLVNRVGDMGLSIA 186 Query 192 MFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPT 251 + L F+TFGT ++ V S LTAIGL++LL AC KSAQVPLQ+WLGDAMEGPT Sbjct 187 IMLMFTTFGTFAFGPVLGAADQTSEGKLTAIGLMLLLAACGKSAQVPLQSWLGDAMEGPT 246 Query 252 PVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRA 311 PVSALIHAATMVTAGVYLIVRS ++N AP AQL V +VGAVTLLFGAI+GCAKDDIK+A Sbjct 247 PVSALIHAATMVTAGVYLIVRSADIFNAAPDAQLVVTVVGAVTLLFGAIVGCAKDDIKKA 306 Query 312 LAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRY 371 LA ST+SQIGYM+LAAGLGP GY FAIMHL+THGFFKAGLFLG+G+V+H M++E DMR+Y Sbjct 307 LAGSTMSQIGYMILAAGLGPIGYVFAIMHLVTHGFFKAGLFLGAGSVMHGMNDEVDMRKY 366 Query 372 GGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAG 431 GGLR +PVTF TFGL YLAIIG P +GFFSKD IIEAA GG G +LG LLGA Sbjct 367 GGLRKYMPVTFITFGLGYLAIIGFPGLSGFFSKDKIIEAAFAKGGTEGWILGAVTLLGAA 426 Query 432 VTAFYMTRVMLMTFFGEKRWTPGA-----HPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 +TA+YMTRVMLMTFFGEKRW P HPHE+P M PM+LLAVGSV G + G Sbjct 427 ITAYYMTRVMLMTFFGEKRWQPDEHGNPPHPHESPKSMVIPMVLLAVGSVAGGAVFEFSG 486 Query 487 TLRHWLQPVVG-SHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSA 545 + WL+PV G +H A + TT + V+ +G+ +AY YG P+P AP R S Sbjct 487 FVE-WLEPVTGFAHGHAP--ISAAAVTTATVAVMVIGVGLAYLQYGRRPVPVTAP-RGSL 542 Query 546 LTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQ 605 LT AAR DL D FN VF+R G LT ++V VD + VDG VN A V S RLR++Q Sbjct 543 LTRAARRDLLQDDFNHAVFVRGGTHLTRSLVYVDHSLVDGVVNGTAAGVGGLSGRLRKLQ 602 Query 606 TGFARNYALSMLVG-AVLVAAALLV 629 G+AR+YA+SM G AVL+AA LL+ Sbjct 603 NGYARSYAVSMFGGTAVLIAATLLM 627 >gi|29831391|ref|NP_826025.1| NADH dehydrogenase subunit L [Streptomyces avermitilis MA-4680] gi|29608506|dbj|BAC72560.1| putative NADH dehydrogenase I chain L (complex I) [Streptomyces avermitilis MA-4680] Length=634 Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/624 (66%), Positives = 475/624 (77%), Gaps = 8/624 (1%) Query 12 LLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQV 71 LLVA PL GAA+LL GGRR DA GH +G A A+F +G +L ADMLG+ ER Q + Sbjct 10 LLVAAPLLGAAVLLCGGRRLDAVGHWIGTVLAAASFVIGVVLFADMLGKGAEERTFTQHL 69 Query 72 FTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLFL 131 F+WIP G + D G Q+DQLSM FVLLI+GVGSLIH+YSVGYM D RRRFFGYLNLFL Sbjct 70 FSWIPVAGFKADVGFQLDQLSMTFVLLITGVGSLIHLYSVGYMEHDERRRRFFGYLNLFL 129 Query 132 ASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAVG 191 A+MLLLV+ADNY+LLYVGWEGVGLASYLLIGFW HKPSAATAAKKAF++NRVGD GL++ Sbjct 130 AAMLLLVLADNYLLLYVGWEGVGLASYLLIGFWQHKPSAATAAKKAFLVNRVGDMGLSIA 189 Query 192 MFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEGPT 251 + L F+TFGT ++ VF V LTAIGL++LL AC KSAQVPLQ+WLGDAMEGPT Sbjct 190 IMLMFTTFGTFAFGPVFTHVGDTGEGKLTAIGLMLLLAACGKSAQVPLQSWLGDAMEGPT 249 Query 252 PVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIKRA 311 PVSALIHAATMVTAGVYLIVRSG ++N AP AQL V +VGAVTLLFGAI+GCAKDDIK+A Sbjct 250 PVSALIHAATMVTAGVYLIVRSGAIFNAAPDAQLVVTVVGAVTLLFGAIVGCAKDDIKKA 309 Query 312 LAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRY 371 LA ST+SQIGYMVLAAGLGP GY FAIMHL+THGFFKAGLFLG+G+V+H M++E DMR+Y Sbjct 310 LAGSTMSQIGYMVLAAGLGPIGYVFAIMHLVTHGFFKAGLFLGAGSVMHGMNDEVDMRKY 369 Query 372 GGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLGAG 431 GGLR +P+TF TFGL YLAIIG P +GFFSKD IIEAA GG G +LGGAALLGA Sbjct 370 GGLRKYMPITFITFGLGYLAIIGFPGLSGFFSKDKIIEAAFAKGGTEGWILGGAALLGAA 429 Query 432 VTAFYMTRVMLMTFFGEKRWTPGA-----HPHEAPAVMTWPMILLAVGSVFSGGLLAVGG 486 +TA+YMTRVMLMTFFGEKRW P A HPHE+P+ MT PMI+LA GSVF+GG ++G Sbjct 430 ITAYYMTRVMLMTFFGEKRWQPDAEGHEPHPHESPSSMTIPMIVLAFGSVFAGGFFSIGD 489 Query 487 TLRHWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSAL 546 HWL+PV G H E + T + ++ VG +AY YG P+P +AP R S L Sbjct 490 RFLHWLEPVTG-HSEGNSPVSALSVTVATMVLLVVGAGIAYAQYGRRPVPVLAP-RGSLL 547 Query 547 TAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQT 606 T AAR DL D FN V +R G LT ++V VD VDG VN A V S RLR++Q Sbjct 548 TRAARRDLLQDDFNHVVLVRGGEHLTRSLVYVDHTLVDGVVNGTAASVGGLSGRLRKLQN 607 Query 607 GFARNYALSMLVG-AVLVAAALLV 629 G+AR+YA+SM G AVL+A LL+ Sbjct 608 GYARSYAVSMFGGVAVLIALTLLM 631 >gi|256396781|ref|YP_003118345.1| NADH dehydrogenase subunit L [Catenulispora acidiphila DSM 44928] gi|256363007|gb|ACU76504.1| proton-translocating NADH-quinone oxidoreductase, chain L [Catenulispora acidiphila DSM 44928] Length=638 Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/634 (64%), Positives = 483/634 (77%), Gaps = 13/634 (2%) Query 11 WLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQ 70 WL+ LPL GAAILL GG+RT+AWGHL GC AL +F +GA L MLG+ G R +HQ Sbjct 6 WLVPGLPLFGAAILLLGGKRTNAWGHLFGCLTALGSFALGAGLFFTMLGKHGAARTMHQH 65 Query 71 VFTWIPAGG-----LQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFG 125 +++W+P G Q D Q+DQLS+ FVLLI+GVGSLIHIYS+GYM D +RR+FF Sbjct 66 LYSWVPVPGTGQHPFQADVSFQLDQLSIVFVLLITGVGSLIHIYSIGYMGHDAERRKFFS 125 Query 126 YLNLFLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGD 185 YLNLFLA+ML+LV+ADNY+LLYVGWEGVGLASYLLIGFW HKPSAA AAKKAFV+NRVGD Sbjct 126 YLNLFLAAMLILVLADNYLLLYVGWEGVGLASYLLIGFWQHKPSAAAAAKKAFVVNRVGD 185 Query 186 AGLAVGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGD 245 GL++ + L F TFG+ S+ VF AS+ LTAIG+++LL AC KSAQ PLQ+WLGD Sbjct 186 VGLSIAIMLMFVTFGSFSFGPVFGSAGGASKGTLTAIGIMLLLAACGKSAQFPLQSWLGD 245 Query 246 AMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAK 305 AMEGPTPVSALIHAATMVTAGVYLIVRS +++L+PTA+L V IVGA+TLLFGAI+GCAK Sbjct 246 AMEGPTPVSALIHAATMVTAGVYLIVRSHAIFDLSPTARLLVTIVGAITLLFGAIVGCAK 305 Query 306 DDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEE 365 DDIK++LA ST+SQIGYM+LAAGLGP GYAFAIMHL+THGFFKAGLFLG+G+V+H M++E Sbjct 306 DDIKKSLAGSTMSQIGYMILAAGLGPIGYAFAIMHLVTHGFFKAGLFLGAGSVMHGMNDE 365 Query 366 QDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGA 425 +MR YGGLR +P+TF TF L YLAIIG PPF+G+FSKD IIEAA GG G++LGGA Sbjct 366 VNMRHYGGLRKYMPITFGTFFLGYLAIIGCPPFSGYFSKDKIIEAAFSKGGTSGAILGGA 425 Query 426 ALLGAGVTAFYMTRVMLMTFFGEKRWTPGA-----HPHEAPAVMTWPMILLAVGSVFSGG 480 ALLGA +TAFYMTR+++MTFFGEKRW A HPHE+P M PM+LLAVGSV +G Sbjct 426 ALLGALITAFYMTRMVIMTFFGEKRWVEDADGHEPHPHESPLSMALPMLLLAVGSVAAGF 485 Query 481 LLAVGGTLRHWLQPVVGSHEEATH--ALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRV 538 L + + WL+PV G E L + + L VAVG+A+A YGT +P V Sbjct 486 LFNLNSSFVDWLEPVTGPRVEGKMPGGLTSSTVGYITLAAVAVGVAIAIAQYGTRKVPAV 545 Query 539 APVRVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTS 598 AP R S +T AAR DLYGDAFNE MRPG LT +V D+ GVDG++N LA LV TS Sbjct 546 AP-RGSFITVAARKDLYGDAFNEAALMRPGQYLTRTLVYTDNRGVDGAINGLAALVGGTS 604 Query 599 NRLRQMQTGFARNYALSMLVGAVLVAAALLVVQL 632 RLR++QTGF R+YALSM GA + AA+L +L Sbjct 605 GRLRRLQTGFVRSYALSMFGGAAALVAAILFAKL 638 >gi|296268284|ref|YP_003650916.1| proton-translocating NADH-quinone oxidoreductase subunit L [Thermobispora bispora DSM 43833] gi|296091071|gb|ADG87023.1| proton-translocating NADH-quinone oxidoreductase, chain L [Thermobispora bispora DSM 43833] Length=642 Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/621 (63%), Positives = 469/621 (76%), Gaps = 8/621 (1%) Query 10 TWLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQ 69 +WL++ALPL GAA+LL GGRRTD +GHLLG ALA+F V + ++LG ER Sbjct 27 SWLMIALPLVGAALLLVGGRRTDKFGHLLGTVMALASFAVSVLAFIELLGFAPQERRRAV 86 Query 70 QVFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNL 129 +F +IP D GL ID LS+ F LLI+GVGSLIHIYS+GYMA DPDRRRFF YLNL Sbjct 87 PLFEFIPG---IADVGLLIDPLSISFCLLITGVGSLIHIYSIGYMAHDPDRRRFFAYLNL 143 Query 130 FLASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLA 189 F+A+MLLLV+ADNY+LL+VGWEGVGLASYLLIGFW +KPSAATAAKKAF++NRVGD GL Sbjct 144 FVAAMLLLVLADNYLLLFVGWEGVGLASYLLIGFWQYKPSAATAAKKAFIINRVGDFGLL 203 Query 190 VGMFLTFSTFGTLSYAGVFAGVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWLGDAMEG 249 +G+F F+TF +L++ VF+ AS LTAIGLL+L+GAC KSAQ+PLQAWL DAMEG Sbjct 204 IGLFTIFATFHSLAFGEVFSAASRASEVTLTAIGLLLLVGACGKSAQLPLQAWLLDAMEG 263 Query 250 PTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGCAKDDIK 309 PTPVSALIHAATMVTAGVYLIVRSGP+Y APTAQL V IVG TLL GAIIG AKDDIK Sbjct 264 PTPVSALIHAATMVTAGVYLIVRSGPIYEGAPTAQLLVTIVGVATLLAGAIIGTAKDDIK 323 Query 310 RALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMR 369 +ALA ST+SQIGYMVLAAG+GPAGYAFAI HL+THGFFKA LFLG+G+++HAM++E DMR Sbjct 324 KALAGSTMSQIGYMVLAAGIGPAGYAFAIAHLITHGFFKADLFLGAGSIMHAMNDEVDMR 383 Query 370 RYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLGGAALLG 429 +YG LR +P+TFATF + YLAIIG P +G+F+KD IIE A+ ++LG A+LG Sbjct 384 KYGALRKVMPITFATFLIGYLAIIGFPLLSGYFTKDGIIETAME----HSAVLGWLAVLG 439 Query 430 AGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAVGGTLR 489 AG+T FYM+RV+ MTFFG KRW AHPHE+P VMT P+I+L++GS+ G L +G Sbjct 440 AGITGFYMSRVVFMTFFGTKRWDANAHPHESPKVMTLPLIVLSIGSIGLGAYLILGNRFM 499 Query 490 HWLQPVVGSHEEATHALPTWVATTLALGVVAVGIAVAYRMYGTAPIPRVAPVRVSALTAA 549 +L P VG+ EE P V LG+VA+G A A+ YG A +P VAP R S L Sbjct 500 LFLAPAVGAPEELPGFHPFSVPGLATLGLVALGAAYAWLKYGAAEVPTVAP-RGSFLVRF 558 Query 550 ARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRLRQMQTGFA 609 AR DLYGDA NE +FMRPG LT V D+ GVDG VN LA L+ TS RLR++QTGFA Sbjct 559 ARRDLYGDALNEALFMRPGQWLTRIAVFFDNRGVDGLVNGLAALIGGTSGRLRRVQTGFA 618 Query 610 RNYALSMLVGAVLVAAALLVV 630 R+YALSM +GA ++ A VV Sbjct 619 RSYALSMFIGATVLVGAWFVV 639 >gi|269128602|ref|YP_003301972.1| proton-translocating NADH-quinone oxidoreductase subunit L [Thermomonospora curvata DSM 43183] gi|268313560|gb|ACY99934.1| proton-translocating NADH-quinone oxidoreductase, chain L [Thermomonospora curvata DSM 43183] Length=636 Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/618 (64%), Positives = 470/618 (77%), Gaps = 14/618 (2%) Query 11 WLLVALPLAGAAILLFGGRRTDAWGHLLGCAAALAAFGVGAMLLADMLGRDGLERAIHQQ 70 WLL+ALPLAGAAILL GGRRTD WGHLLG +LA+F VG + MLG D ER Sbjct 11 WLLIALPLAGAAILLLGGRRTDKWGHLLGTGMSLASFAVGLAMFVQMLGYDPGERRRLVH 70 Query 71 VFTWIPAGGLQVDFGLQIDQLSMCFVLLISGVGSLIHIYSVGYMAEDPDRRRFFGYLNLF 130 ++ W G +D GL ID LS+ FVLLI+GVGSLIHIYS+GYMAED RRRFF YLNLF Sbjct 71 LYEWFTVGDFHLDMGLLIDPLSISFVLLITGVGSLIHIYSIGYMAEDEHRRRFFAYLNLF 130 Query 131 LASMLLLVVADNYVLLYVGWEGVGLASYLLIGFWYHKPSAATAAKKAFVMNRVGDAGLAV 190 +A+MLLLV+ADNYV L++GWEGVGLASYLLIGFW +KPSAATAAKKAFV+NRVGD G+ + Sbjct 131 VAAMLLLVLADNYVGLFIGWEGVGLASYLLIGFWQYKPSAATAAKKAFVVNRVGDLGMVI 190 Query 191 GMFLTFSTFGTLSYAGVFA-------GVPAASRAVLTAIGLLMLLGACAKSAQVPLQAWL 243 G+ L F+TFGT+++ + S TAIGLL+LLGAC KSAQ+PLQ+WL Sbjct 191 GISLMFATFGTVAFTDILGEGAHHVGAAQQISEGTATAIGLLLLLGACGKSAQLPLQSWL 250 Query 244 GDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAPTAQLAVVIVGAVTLLFGAIIGC 303 DAMEGPTPVSALIHAATMVTAGVYLIVRSGP++ +AP AQLAV IVGA TLL GAIIGC Sbjct 251 LDAMEGPTPVSALIHAATMVTAGVYLIVRSGPIFEMAPDAQLAVTIVGAATLLAGAIIGC 310 Query 304 AKDDIKRALAASTISQIGYMVLAAGLGPAGYAFAIMHLLTHGFFKAGLFLGSGAVIHAMH 363 AKDDIK+ALA ST+SQIGYMVLAAGLGPAGY FAI HL+ HGFFKAGLFLG+G+V+HAM+ Sbjct 311 AKDDIKKALAGSTMSQIGYMVLAAGLGPAGYVFAIAHLIAHGFFKAGLFLGAGSVMHAMN 370 Query 364 EEQDMRRYGGLRAALPVTFATFGLAYLAIIGVPPFAGFFSKDAIIEAALGAGGIRGSLLG 423 ++ +MR YGGLR A+ +T+ATFGL YLAIIGVPP AGFF+K+ II AA GG G +LG Sbjct 371 DDVNMRHYGGLRTAMTITWATFGLGYLAIIGVPPLAGFFTKEGIITAAFDKGGTSGMILG 430 Query 424 GAALLGAGVTAFYMTRVMLMTFFGEKRWTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLA 483 ++GA +TA+YM+RVM MTF+G+KRW HPHE+P VMT P++LLAVGSV +G +L Sbjct 431 TCTVVGAAITAYYMSRVMFMTFYGDKRWEDDVHPHESPKVMTIPLMLLAVGSVAAGWVLV 490 Query 484 VGGTLRHWLQPVVGSHEEATHALPTW--VATTLALGVVAVGIAVAYRMYGTAPIPRVAPV 541 + G+ +L+PVVG EE H W V + L ++ G+A+A+R YG P+PR AP Sbjct 491 L-GSFPGFLEPVVG--EEGHHEF-HWITVPSVTVLVLMLAGVALAWRQYGARPVPRKAPA 546 Query 542 RVSALTAAARADLYGDAFNEEVFMRPGAQLTNAVVAVDDAGVDGSVNALATLVSQTSNRL 601 S LT AAR DLYGD+ NE +FMRPG LT V D+ GVDG VN LA + TS R+ Sbjct 547 G-SFLTVAARKDLYGDSINESLFMRPGQWLTRLAVFFDNKGVDGIVNGLAAAIGGTSGRV 605 Query 602 RQMQTGFARNYALSMLVG 619 R++QTGF R+YALSM +G Sbjct 606 RRLQTGFVRSYALSMFLG 623 Lambda K H 0.326 0.139 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1459221943520 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40