BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3158 Length=531 Score E Sequences producing significant alignments: (Bits) Value gi|15610294|ref|NP_217674.1| NADH dehydrogenase subunit N [Mycob... 1038 0.0 gi|289746966|ref|ZP_06506344.1| NADH dehydrogenase subunit I N n... 1037 0.0 gi|254233776|ref|ZP_04927101.1| NADH dehydrogenase I (chain N) n... 1037 0.0 gi|15842734|ref|NP_337771.1| NADH dehydrogenase subunit N [Mycob... 1034 0.0 gi|183981485|ref|YP_001849776.1| NADH dehydrogenase I (chain N) ... 848 0.0 gi|118467245|ref|YP_883198.1| NADH dehydrogenase subunit N [Myco... 846 0.0 gi|254776468|ref|ZP_05217984.1| NADH dehydrogenase subunit N [My... 845 0.0 gi|240169657|ref|ZP_04748316.1| NADH dehydrogenase subunit N [My... 843 0.0 gi|41409312|ref|NP_962148.1| NADH dehydrogenase subunit N [Mycob... 843 0.0 gi|118617959|ref|YP_906291.1| NADH dehydrogenase subunit N [Myco... 842 0.0 gi|336459333|gb|EGO38276.1| proton-translocating NADH-quinone ox... 841 0.0 gi|342861066|ref|ZP_08717715.1| NADH:ubiquinone oxidoreductase s... 838 0.0 gi|296169177|ref|ZP_06850831.1| NADH-quinone oxidoreductase subu... 834 0.0 gi|254819285|ref|ZP_05224286.1| NADH dehydrogenase subunit N [My... 830 0.0 gi|333991512|ref|YP_004524126.1| NADH dehydrogenase I (chain N) ... 682 0.0 gi|126434132|ref|YP_001069823.1| NADH dehydrogenase subunit N [M... 649 0.0 gi|108798534|ref|YP_638731.1| NADH dehydrogenase subunit N [Myco... 649 0.0 gi|111022885|ref|YP_705857.1| NADH dehydrogenase subunit N [Rhod... 641 0.0 gi|229490826|ref|ZP_04384661.1| NADH-quinone oxidoreductase subu... 640 0.0 gi|120402870|ref|YP_952699.1| NADH dehydrogenase subunit N [Myco... 640 0.0 gi|226306201|ref|YP_002766161.1| NADH-quinone oxidoreductase cha... 639 0.0 gi|226365393|ref|YP_002783176.1| NADH dehydrogenase subunit N [R... 639 0.0 gi|145225073|ref|YP_001135751.1| NADH dehydrogenase subunit N [M... 629 3e-178 gi|315445442|ref|YP_004078321.1| NADH dehydrogenase subunit N [M... 629 3e-178 gi|118470109|ref|YP_886411.1| NADH dehydrogenase subunit N [Myco... 628 7e-178 gi|312139321|ref|YP_004006657.1| NADH dehydrogenase (quinone) ch... 624 1e-176 gi|325676670|ref|ZP_08156345.1| NADH-quinone oxidoreductase subu... 621 1e-175 gi|254391150|ref|ZP_05006357.1| NADH dehydrogenase subunit N [St... 593 3e-167 gi|54024624|ref|YP_118866.1| NADH dehydrogenase subunit N [Nocar... 588 6e-166 gi|343926363|ref|ZP_08765868.1| NADH-quinone oxidoreductase chai... 588 1e-165 gi|297159521|gb|ADI09233.1| NADH dehydrogenase subunit N [Strept... 580 2e-163 gi|169629233|ref|YP_001702882.1| NADH dehydrogenase subunit N [M... 579 5e-163 gi|294630809|ref|ZP_06709369.1| NADH-quinone oxidoreductase, N s... 579 5e-163 gi|333922091|ref|YP_004495672.1| NADH-quinone oxidoreductase sub... 577 2e-162 gi|262200408|ref|YP_003271616.1| proton-translocating NADH-quino... 576 3e-162 gi|21222958|ref|NP_628737.1| NADH dehydrogenase subunit N [Strep... 571 1e-160 gi|345008481|ref|YP_004810835.1| NAD(P)H-quinone oxidoreductase ... 570 3e-160 gi|302543431|ref|ZP_07295773.1| NADH dehydrogenase I, N subunit ... 569 5e-160 gi|329935984|ref|ZP_08285784.1| NADH dehydrogenase subunit NuoN ... 566 4e-159 gi|328884325|emb|CCA57564.1| NADH-ubiquinone oxidoreductase chai... 565 6e-159 gi|320009191|gb|ADW04041.1| proton-translocating NADH-quinone ox... 563 2e-158 gi|337767482|emb|CCB76193.1| NADH-quinone oxidoreductase subunit... 563 3e-158 gi|290958247|ref|YP_003489429.1| NADH dehydrogenase subunit NuoN... 561 1e-157 gi|311897903|dbj|BAJ30311.1| putative NADH-quinone oxidoreductas... 559 4e-157 gi|345001420|ref|YP_004804274.1| proton-translocating NADH-quino... 559 5e-157 gi|269128600|ref|YP_003301970.1| proton-translocating NADH-quino... 558 9e-157 gi|295837112|ref|ZP_06824045.1| NADH-quinone oxidoreductase, N s... 557 2e-156 gi|318057830|ref|ZP_07976553.1| NADH:ubiquinone oxidoreductase s... 555 9e-156 gi|182436764|ref|YP_001824483.1| NADH dehydrogenase subunit N [S... 554 2e-155 gi|302521207|ref|ZP_07273549.1| NADH dehydrogenase subunit N [St... 554 2e-155 >gi|15610294|ref|NP_217674.1| NADH dehydrogenase subunit N [Mycobacterium tuberculosis H37Rv] gi|31794334|ref|NP_856827.1| NADH dehydrogenase subunit N [Mycobacterium bovis AF2122/97] gi|121639041|ref|YP_979265.1| NADH dehydrogenase subunit N [Mycobacterium bovis BCG str. Pasteur 1173P2] 75 more sequence titles Length=531 Score = 1038 bits (2683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/531 (100%), Positives = 531/531 (100%), Gaps = 0/531 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV Sbjct 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL Sbjct 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE Sbjct 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA Sbjct 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 Query 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA Sbjct 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV Sbjct 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG Sbjct 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 Query 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF Sbjct 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 Query 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR Sbjct 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 >gi|289746966|ref|ZP_06506344.1| NADH dehydrogenase subunit I N nuoN (NADH-ubiquinone oxidoreductase N) [Mycobacterium tuberculosis 02_1987] gi|289687494|gb|EFD54982.1| NADH dehydrogenase subunit I N nuoN (NADH-ubiquinone oxidoreductase N) [Mycobacterium tuberculosis 02_1987] Length=531 Score = 1037 bits (2682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 530/531 (99%), Positives = 531/531 (100%), Gaps = 0/531 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV Sbjct 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL Sbjct 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE Sbjct 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA Sbjct 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 Query 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA Sbjct 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV Sbjct 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 I+DNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG Sbjct 361 ISDNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 Query 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF Sbjct 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 Query 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR Sbjct 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 >gi|254233776|ref|ZP_04927101.1| NADH dehydrogenase I (chain N) nuoN (NADH-ubiquinone oxidoreductase chain N) [Mycobacterium tuberculosis C] gi|124599305|gb|EAY58409.1| NADH dehydrogenase I (chain N) nuoN (NADH-ubiquinone oxidoreductase chain N) [Mycobacterium tuberculosis C] Length=531 Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 530/531 (99%), Positives = 530/531 (99%), Gaps = 0/531 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV Sbjct 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL Sbjct 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 PGLDSFTPQASAVPGSDAERQAERAG TQTELFPLAMLSVGGMMVFPASNDLLTMFVALE Sbjct 121 PGLDSFTPQASAVPGSDAERQAERAGTTQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA Sbjct 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 Query 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA Sbjct 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV Sbjct 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG Sbjct 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 Query 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF Sbjct 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 Query 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR Sbjct 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 >gi|15842734|ref|NP_337771.1| NADH dehydrogenase subunit N [Mycobacterium tuberculosis CDC1551] gi|13883056|gb|AAK47585.1| NADH dehydrogenase I, N subunit [Mycobacterium tuberculosis CDC1551] Length=531 Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 529/531 (99%), Positives = 529/531 (99%), Gaps = 0/531 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV Sbjct 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 ARSIHGSGH AVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL Sbjct 61 ARSIHGSGHXAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 PGLDSFTPQ SAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE Sbjct 121 PGLDSFTPQLSAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA Sbjct 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 Query 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA Sbjct 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV Sbjct 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG Sbjct 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 Query 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF Sbjct 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 Query 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR Sbjct 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 >gi|183981485|ref|YP_001849776.1| NADH dehydrogenase I (chain N) NuoN (NADH- ubiquinone oxidoreductase chain N) [Mycobacterium marinum M] gi|183174811|gb|ACC39921.1| NADH dehydrogenase I (chain N) NuoN (NADH- ubiquinone oxidoreductase chain N) [Mycobacterium marinum M] Length=528 Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/532 (84%), Positives = 479/532 (91%), Gaps = 5/532 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 MILP+P +EYFLL PMLIVF +AV GVLAEAFLPRR RYGAQVTLAL G A +AVIVV Sbjct 1 MILPSPSIEYFLLCPMLIVFGIAVIGVLAEAFLPRRLRYGAQVTLALSGLVAAFVAVIVV 60 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSA-RVSPQRQNTLAVAR 119 ARSI +G AVLG++AVDR TLFLQGTVLLV +MAV+F+AERSA RV+ Q + +A Sbjct 61 ARSIPVTGRRAVLGSMAVDRPTLFLQGTVLLVAVMAVIFIAERSAHRVAAQTKTAVAAGS 120 Query 120 LPGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVAL 179 GLDSFTPQASAVPGSDAER+A+RAGA QTE+FPL LSVGGMMVFPA+NDLLTMFVAL Sbjct 121 -GGLDSFTPQASAVPGSDAEREAQRAGAAQTEIFPLLTLSVGGMMVFPAANDLLTMFVAL 179 Query 180 EVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRD 239 EVLSLPLYLMCGLAR+RRLLSQE+A+KYFLLGAFSSAFFLYGVALLYGATG+LTL GIRD Sbjct 180 EVLSLPLYLMCGLARHRRLLSQESALKYFLLGAFSSAFFLYGVALLYGATGSLTLTGIRD 239 Query 240 ALAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 299 +L AR+D SMAL GV LL+VGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG Sbjct 240 SLTARSDMSMALVGVGLLSVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 299 Query 300 ALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTG 359 ALLRVVYVALPPLHDQWRPVLWAI+ILTM VGT+TAVNQTNVKRMLAYSSVAHVGFILTG Sbjct 300 ALLRVVYVALPPLHDQWRPVLWAISILTMAVGTITAVNQTNVKRMLAYSSVAHVGFILTG 359 Query 360 VIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIV 419 VIADN AGLSATLFYLVAYSFST+GAFAIVGLVR A+ G EDA+LSHWAGLGQRSPIV Sbjct 360 VIADNSAGLSATLFYLVAYSFSTVGAFAIVGLVRDAN---GVEDANLSHWAGLGQRSPIV 416 Query 420 GVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSM 479 GVMLSMFLLAFAGIPLTSGF+SKF+VF+AAA GA PLV++GVISSGVAAYFYVRVIV M Sbjct 417 GVMLSMFLLAFAGIPLTSGFISKFSVFKAAAEGGAAPLVVIGVISSGVAAYFYVRVIVLM 476 Query 480 FFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FFTEES DTP V APG+LSKAAIAVC VTV+LGI PQPVLDLA+QAA LL Sbjct 477 FFTEESSDTPQVVAPGILSKAAIAVCAAVTVLLGILPQPVLDLANQAAHLLH 528 >gi|118467245|ref|YP_883198.1| NADH dehydrogenase subunit N [Mycobacterium avium 104] gi|118168532|gb|ABK69429.1| NADH-quinone oxidoreductase chain n [Mycobacterium avium 104] Length=527 Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/531 (83%), Positives = 468/531 (89%), Gaps = 5/531 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 M LP P ++YFLL P LIVF VAVAGVLAEAFLPRR RY AQVTLALGG AL AVI V Sbjct 2 MTLPTPSIQYFLLCPTLIVFGVAVAGVLAEAFLPRRIRYTAQVTLALGGLVAALFAVIEV 61 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 A S+ SG AAVLGA+A+DR TL+LQGTVLLV +MAV+F+AER+ S + VA Sbjct 62 AESLPASGRAAVLGAMAIDRPTLYLQGTVLLVAVMAVIFIAERTQTKSDSK--VAVVAGS 119 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 GLDSFTPQASAVP SDAER+AERAGA QTELFPLAMLSVGGMMVFPASNDLLTMFVALE Sbjct 120 GGLDSFTPQASAVPDSDAEREAERAGAAQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 179 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYLMCGLAR+RRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTL L GIRDA Sbjct 180 VLSLPLYLMCGLARHRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLLLTGIRDA 239 Query 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 L R D S+AL GVALL+VGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA Sbjct 240 LITRGDTSLALVGVALLSVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 299 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 LLRVVYVALPPLHDQWRPVLW I+ILTM VGT+TAVNQ++VKRMLAYSSVAHVGFILTGV Sbjct 300 LLRVVYVALPPLHDQWRPVLWTISILTMAVGTITAVNQSDVKRMLAYSSVAHVGFILTGV 359 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 IADN GLSATLFYL+AYSFST+GAFAIVGL+R AD G EDA LSHWAGLGQRSPIVG Sbjct 360 IADNHTGLSATLFYLLAYSFSTVGAFAIVGLIRDAD---GVEDATLSHWAGLGQRSPIVG 416 Query 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 VM SMFLLAFAGIPLTSGFVSK AVF+AAA GAVPLVIVGV++SGVAAYFYVRVIVSMF Sbjct 417 VMFSMFLLAFAGIPLTSGFVSKLAVFKAAAQGGAVPLVIVGVVASGVAAYFYVRVIVSMF 476 Query 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FTE + DTPHV APG+LSKAAIAVC VTV LG+ PQP+LDLADQAAQLL Sbjct 477 FTEATEDTPHVVAPGILSKAAIAVCAAVTVALGVFPQPLLDLADQAAQLLH 527 >gi|254776468|ref|ZP_05217984.1| NADH dehydrogenase subunit N [Mycobacterium avium subsp. avium ATCC 25291] Length=526 Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/531 (83%), Positives = 467/531 (88%), Gaps = 5/531 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 M LP P ++YFLL P LIVF VAVAGVLAEAFLPRR RY AQVTLALGG AL AVI V Sbjct 1 MTLPTPSIQYFLLCPTLIVFGVAVAGVLAEAFLPRRIRYTAQVTLALGGLVAALFAVIEV 60 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 A S+ SG AAVLGA+A+DR TL+LQGTVLLV +MAV+F+AER+ S + VA Sbjct 61 AESLPASGRAAVLGAMAIDRPTLYLQGTVLLVAVMAVIFIAERTQTKSDSK--VAVVAGS 118 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 GLDSFTPQASAVP SDAER+AERAGA QTELFPLAMLSVGGMMVFPASNDLLTMFVALE Sbjct 119 GGLDSFTPQASAVPDSDAEREAERAGAAQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 178 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYLMCGLAR+RRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTL L GIRDA Sbjct 179 VLSLPLYLMCGLARHRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLLLTGIRDA 238 Query 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 L R D S+AL GVALL+VGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA Sbjct 239 LITRGDTSLALVGVALLSVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 298 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 LLRVVYVALPPLHDQWRPVLW I+ILTM VGT+TAVNQ++VKRMLAYSSVAHVGFILTGV Sbjct 299 LLRVVYVALPPLHDQWRPVLWTISILTMAVGTITAVNQSDVKRMLAYSSVAHVGFILTGV 358 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 IADN GLSATLFYL+AYSFST+GAFAIV L+R AD G EDA LSHWAGLGQRSPIVG Sbjct 359 IADNHTGLSATLFYLLAYSFSTVGAFAIVALIRDAD---GVEDATLSHWAGLGQRSPIVG 415 Query 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 VM SMFLLAFAGIPLTSGFVSK AVF+AAA GAVPLVIVGV++SGVAAYFYVRVIVSMF Sbjct 416 VMFSMFLLAFAGIPLTSGFVSKLAVFKAAAQGGAVPLVIVGVVASGVAAYFYVRVIVSMF 475 Query 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FTE + DTPHV APG+LSKAAIAVC VTV LG+ PQP+LDLADQAAQLL Sbjct 476 FTEATEDTPHVVAPGILSKAAIAVCAAVTVALGVFPQPLLDLADQAAQLLH 526 >gi|240169657|ref|ZP_04748316.1| NADH dehydrogenase subunit N [Mycobacterium kansasii ATCC 12478] Length=528 Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/531 (82%), Positives = 467/531 (88%), Gaps = 3/531 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 M LP+P +EYFLL PMLIVF VAV GVL EAFLPRR RYGAQVTL +GG A I VI+V Sbjct 1 MTLPSPSIEYFLLCPMLIVFGVAVVGVLVEAFLPRRMRYGAQVTLTVGGLIAAFITVIMV 60 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 ARS+ SG AVLG++AVDR LFLQGTVLLV ++AV+F+AERSA + A Sbjct 61 ARSVPASGRRAVLGSVAVDRPALFLQGTVLLVAVLAVIFIAERSAHRAAAPNRVTVAAGS 120 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 GLDSFTPQASAVPGS AE +AERAGA QTE+FPL LSVGGMMVF ASNDLLTMFVALE Sbjct 121 GGLDSFTPQASAVPGSAAEHEAERAGAAQTEIFPLLTLSVGGMMVFSASNDLLTMFVALE 180 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYLMCGLAR+RRLLSQEAA+KYFLLGAFSSAFFLYGVALLYGATGTLTL GIRD+ Sbjct 181 VLSLPLYLMCGLARHRRLLSQEAALKYFLLGAFSSAFFLYGVALLYGATGTLTLSGIRDS 240 Query 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 L A++D SMAL GV LL+VGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA Sbjct 241 LTAQSDTSMALVGVGLLSVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 LLRVVYVALPPLHDQWRPVLWAI+ILTM V T+TAVNQT+VKRMLAYSSVAHVGFILTGV Sbjct 301 LLRVVYVALPPLHDQWRPVLWAISILTMAVATITAVNQTDVKRMLAYSSVAHVGFILTGV 360 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 IADN AGLSATLFYLVAYSFST+GAFAIVGL+R + G EDA+LSHWAGLGQRSPIVG Sbjct 361 IADNQAGLSATLFYLVAYSFSTVGAFAIVGLIRNTE---GVEDANLSHWAGLGQRSPIVG 417 Query 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 VMLSMFLLAFAGIPLTSGF+SKFAVFRAAA GAVPLVI+GVI+SGVAAYFYVRVIV MF Sbjct 418 VMLSMFLLAFAGIPLTSGFISKFAVFRAAAQGGAVPLVIIGVIASGVAAYFYVRVIVLMF 477 Query 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FTE + DTP V APGVLSKAAIA+C +VTVVLGI PQPVLDLA+QAAQLL Sbjct 478 FTEGTHDTPQVVAPGVLSKAAIAICALVTVVLGIFPQPVLDLAEQAAQLLH 528 >gi|41409312|ref|NP_962148.1| NADH dehydrogenase subunit N [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398132|gb|AAS05762.1| NuoN [Mycobacterium avium subsp. paratuberculosis K-10] Length=527 Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/531 (83%), Positives = 466/531 (88%), Gaps = 5/531 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 M LP P ++YFLL P LIVF VAVAGVLAEAFLPRR RY AQVTLALGG AL AVI V Sbjct 2 MTLPTPSIQYFLLCPTLIVFGVAVAGVLAEAFLPRRIRYTAQVTLALGGLVAALFAVIEV 61 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 A S+ SG AAVLGA+A+DR TL+LQGTVLLV +MAV+F+AER+ S + VA Sbjct 62 AESLPASGRAAVLGAMAIDRPTLYLQGTVLLVAVMAVIFIAERTQTKSDSK--VAVVAGS 119 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 GLDSFTPQASAVP SDAER+AERAGA QTELFPLAMLSVGGMMVFPASNDLLTMFVALE Sbjct 120 GGLDSFTPQASAVPDSDAEREAERAGAAQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 179 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYLMCGLAR+RRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTL L GIRDA Sbjct 180 VLSLPLYLMCGLARHRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLLLTGIRDA 239 Query 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 L R D S+AL GVALL+VGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA Sbjct 240 LITRGDTSLALVGVALLSVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 299 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 LLRVVYVALPPLHDQWRPVLW I+ILTM VGT+TAVNQ +VKRMLAYSSVAHVGFILTGV Sbjct 300 LLRVVYVALPPLHDQWRPVLWTISILTMAVGTITAVNQGDVKRMLAYSSVAHVGFILTGV 359 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 IADN GLSATLFYL+AYSFST+GAFAIVGL+R AD G EDA LSHWA LGQRSPIVG Sbjct 360 IADNHTGLSATLFYLLAYSFSTVGAFAIVGLIRDAD---GVEDATLSHWAALGQRSPIVG 416 Query 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 VM SMFLLAFAGIPLTSGFVSK AVF+AAA GAVPLVIVGV++SGVAAYFYVRVIVSMF Sbjct 417 VMFSMFLLAFAGIPLTSGFVSKLAVFKAAAQGGAVPLVIVGVVASGVAAYFYVRVIVSMF 476 Query 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FTE + DTPHV APG+LSKAAIAVC VTV LG+ PQP+LDLADQAAQLL Sbjct 477 FTEATEDTPHVVAPGILSKAAIAVCAAVTVALGVFPQPLLDLADQAAQLLH 527 >gi|118617959|ref|YP_906291.1| NADH dehydrogenase subunit N [Mycobacterium ulcerans Agy99] gi|118570069|gb|ABL04820.1| NADH dehydrogenase I (chain N) NuoN (NADH- ubiquinone oxidoreductase chain N) [Mycobacterium ulcerans Agy99] Length=528 Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/532 (83%), Positives = 476/532 (90%), Gaps = 5/532 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 MILP+P +EYFLL PMLIVF +AV GVLAEAFLPRR RYGAQVTLAL G A +AVIVV Sbjct 1 MILPSPSIEYFLLCPMLIVFGIAVVGVLAEAFLPRRLRYGAQVTLALSGLVAAFVAVIVV 60 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSA-RVSPQRQNTLAVAR 119 ARSI +G AVLG++AVDR TLFLQGTVLLV +MAV+F+AERSA RV+ Q + +A Sbjct 61 ARSIPVTGRRAVLGSMAVDRPTLFLQGTVLLVEVMAVIFIAERSAHRVAAQTKTAVAAGS 120 Query 120 LPGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVAL 179 GLDSFTPQASAVPGSDAER+A+RAG QTE+FPL LSVGGMMVFPA+NDLLTMFVAL Sbjct 121 -GGLDSFTPQASAVPGSDAEREAQRAGVAQTEIFPLLTLSVGGMMVFPAANDLLTMFVAL 179 Query 180 EVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRD 239 EVLSLPLYLMCGLAR+RRLLSQE+A+KYFLLGAFSSA FLYGVALLYGAT +LTL GIRD Sbjct 180 EVLSLPLYLMCGLARHRRLLSQESALKYFLLGAFSSAVFLYGVALLYGATDSLTLTGIRD 239 Query 240 ALAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 299 +LAAR+D SMAL GV LL+VGLLFKVGAVPFHSWIPDVYQGAPTP TGFMAAATKVAAFG Sbjct 240 SLAARSDMSMALVGVGLLSVGLLFKVGAVPFHSWIPDVYQGAPTPTTGFMAAATKVAAFG 299 Query 300 ALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTG 359 ALLRVVYVALPPLHDQWRPVLWAI+ILTM VGT+TAVNQTNVKRMLAYSSVAHVGFILTG Sbjct 300 ALLRVVYVALPPLHDQWRPVLWAISILTMAVGTITAVNQTNVKRMLAYSSVAHVGFILTG 359 Query 360 VIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIV 419 VIADN AGLSATLFYLVAYSFST+GAFAIVGLVR AD G EDA+LSHWAGLGQRSPIV Sbjct 360 VIADNSAGLSATLFYLVAYSFSTVGAFAIVGLVRDAD---GVEDANLSHWAGLGQRSPIV 416 Query 420 GVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSM 479 GVMLSMFLLAFAGIPLTSGF+SKF+VF+AAA GA PLV++GVISSGVAAYFYVRVIV M Sbjct 417 GVMLSMFLLAFAGIPLTSGFISKFSVFKAAAEGGAAPLVVIGVISSGVAAYFYVRVIVLM 476 Query 480 FFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FFTEES DTP V APG+LSKAAIAVC VTV+LGI PQPVLDLA+QAA LL Sbjct 477 FFTEESSDTPQVVAPGILSKAAIAVCAAVTVLLGILPQPVLDLANQAAHLLH 528 >gi|336459333|gb|EGO38276.1| proton-translocating NADH-quinone oxidoreductase, chain N [Mycobacterium avium subsp. paratuberculosis S397] Length=527 Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/531 (83%), Positives = 465/531 (88%), Gaps = 5/531 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 M LP P ++YFLL P LIVF VAVAGVLAEAFLPRR RY AQVTLALGG AL AVI V Sbjct 2 MTLPTPSIQYFLLCPTLIVFGVAVAGVLAEAFLPRRIRYTAQVTLALGGLVAALFAVIEV 61 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 A S+ SG AAVLGA+A+DR TL+LQGTVLLV +MAV+F+AER+ S + VA Sbjct 62 AESLPASGRAAVLGAMAIDRPTLYLQGTVLLVAVMAVIFIAERTQTKSDSK--VAVVAGS 119 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 GLDSFTPQASAVP SDAER+AERAGA QTELFPLAMLSVGGMMVFPASNDLLTMFVALE Sbjct 120 GGLDSFTPQASAVPDSDAEREAERAGAAQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 179 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYLMCGLAR+RRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTL L GIRDA Sbjct 180 VLSLPLYLMCGLARHRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLLLTGIRDA 239 Query 241 LAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 L R D S+AL GVALL+VGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA Sbjct 240 LITRGDTSLALVGVALLSVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 299 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 LLRVVYVALPPLHDQWRPVLW I+ILTM VG +TAVNQ +VKRMLAYSSVAHVGFILTGV Sbjct 300 LLRVVYVALPPLHDQWRPVLWTISILTMAVGAITAVNQGDVKRMLAYSSVAHVGFILTGV 359 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 IADN GLSATLFYL+AYSFST+GAFAIVGL+R AD G EDA LSHWA LGQRSPIVG Sbjct 360 IADNHTGLSATLFYLLAYSFSTVGAFAIVGLIRDAD---GVEDATLSHWAALGQRSPIVG 416 Query 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 VM SMFLLAFAGIPLTSGFVSK AVF+AAA GAVPLVIVGV++SGVAAYFYVRVIVSMF Sbjct 417 VMFSMFLLAFAGIPLTSGFVSKLAVFKAAAQGGAVPLVIVGVVASGVAAYFYVRVIVSMF 476 Query 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FTE + DTPHV APG+LSKAAIAVC VTV LG+ PQP+LDLADQAAQLL Sbjct 477 FTEATEDTPHVVAPGILSKAAIAVCAAVTVALGVFPQPLLDLADQAAQLLH 527 >gi|342861066|ref|ZP_08717715.1| NADH:ubiquinone oxidoreductase subunit N [Mycobacterium colombiense CECT 3035] gi|342131510|gb|EGT84780.1| NADH:ubiquinone oxidoreductase subunit N [Mycobacterium colombiense CECT 3035] Length=529 Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/532 (82%), Positives = 466/532 (88%), Gaps = 4/532 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 M LP P ++YFLL P LIVF VAV GVLAEAFLPRR RY QVTL+L G A +AVI V Sbjct 1 MTLPTPSIQYFLLCPTLIVFGVAVLGVLAEAFLPRRIRYAGQVTLSLAGLIAAFVAVIAV 60 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQR-QNTLAVAR 119 +RSI SG AVLGA+A+DR TL+LQGTVLLV +MAV+F+AER+ + R + A Sbjct 61 SRSIQSSGRVAVLGAMAIDRPTLYLQGTVLLVAVMAVIFIAERTQAGADSRVSVGVGAAG 120 Query 120 LPGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVAL 179 GLDSFTPQASAVP SDAER+AERAGA QTELFPLA+LSVGGMMVFPASNDLLTMFVAL Sbjct 121 KGGLDSFTPQASAVPDSDAEREAERAGAAQTELFPLALLSVGGMMVFPASNDLLTMFVAL 180 Query 180 EVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRD 239 EVLSLPLYLMCGLAR+RRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTL L GIRD Sbjct 181 EVLSLPLYLMCGLARHRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLLLTGIRD 240 Query 240 ALAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 299 ALAA D SMAL GVALL+VGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG Sbjct 241 ALAAHGDTSMALVGVALLSVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 300 Query 300 ALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTG 359 ALLRVVYVALPPLHDQWRPVLW I+ILTM VGT+TAVNQT+VKRMLAYSSVAHVGFILTG Sbjct 301 ALLRVVYVALPPLHDQWRPVLWTISILTMAVGTITAVNQTDVKRMLAYSSVAHVGFILTG 360 Query 360 VIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIV 419 VIADN GLSATLFYL+AYSFST+GAFAIVGL+R AD G EDA L+HWAGLGQRSPIV Sbjct 361 VIADNHTGLSATLFYLLAYSFSTVGAFAIVGLIRDAD---GVEDATLAHWAGLGQRSPIV 417 Query 420 GVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSM 479 GVM SMFLLAFAGIPLTSGFVSK AVF+AAA GA PLVIVGV++SGVAAYFYVRVIVSM Sbjct 418 GVMFSMFLLAFAGIPLTSGFVSKLAVFKAAAQGGAAPLVIVGVVASGVAAYFYVRVIVSM 477 Query 480 FFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FFTE + DTPHV APG+LSKAAIA+C VTVVLGI PQP+LDLADQAAQLL Sbjct 478 FFTEATEDTPHVVAPGILSKAAIALCAAVTVVLGIFPQPLLDLADQAAQLLH 529 >gi|296169177|ref|ZP_06850831.1| NADH-quinone oxidoreductase subunit N [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896156|gb|EFG75822.1| NADH-quinone oxidoreductase subunit N [Mycobacterium parascrofulaceum ATCC BAA-614] Length=530 Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/532 (81%), Positives = 464/532 (88%), Gaps = 4/532 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 M LP P +EYFLL P LIVF VAVAGVLAEAFLPRR RYGAQVTLAL G A +A + V Sbjct 2 MTLPTPSIEYFLLCPTLIVFGVAVAGVLAEAFLPRRARYGAQVTLALAGLIAAFLATVEV 61 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERS-ARVSPQRQNTLAVAR 119 A SI SG AVLGA+AVDR TL+LQGTVLLV ++AV+F+AER+ A+ + + Sbjct 62 AESIPASGRTAVLGAMAVDRPTLYLQGTVLLVAVLAVIFVAERTQAKADSKVVAGVGAGG 121 Query 120 LPGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVAL 179 GLDSFTPQASAVPGSDAER AERAGA QTELFPL MLSVGGM+VFPASNDLLTMFVAL Sbjct 122 SVGLDSFTPQASAVPGSDAERDAERAGAAQTELFPLLMLSVGGMLVFPASNDLLTMFVAL 181 Query 180 EVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRD 239 EVLSLPLYLMCGLAR+RRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTL L GIRD Sbjct 182 EVLSLPLYLMCGLARHRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLLLTGIRD 241 Query 240 ALAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 299 ALAA D S AL GVALL+VGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG Sbjct 242 ALAAHGDTSTALVGVALLSVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 301 Query 300 ALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTG 359 ALLRVVYVALPPLHDQWRPVLW I+ILTM VGT+TAVNQT+VKRMLAYSSVAHVGFILTG Sbjct 302 ALLRVVYVALPPLHDQWRPVLWTISILTMAVGTITAVNQTDVKRMLAYSSVAHVGFILTG 361 Query 360 VIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIV 419 VIADN AGLS+TLFYL+AYSFST+GAFAIV L+R AD G EDA LSHW+GLGQRSPIV Sbjct 362 VIADNQAGLSSTLFYLLAYSFSTVGAFAIVSLIRDAD---GVEDATLSHWSGLGQRSPIV 418 Query 420 GVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSM 479 GVM SMFLLAFAGIPLTSGFVSK AVF+AAA GA PLVI+GV++SG+AAYFYVRVIVSM Sbjct 419 GVMFSMFLLAFAGIPLTSGFVSKLAVFKAAAQGGAAPLVIIGVVASGIAAYFYVRVIVSM 478 Query 480 FFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FFTE + DTPHV PG+LSKAAIAVC +VTV+LGI PQP+LDLAD AAQLL Sbjct 479 FFTEATDDTPHVVEPGILSKAAIAVCALVTVLLGIFPQPLLDLADHAAQLLH 530 >gi|254819285|ref|ZP_05224286.1| NADH dehydrogenase subunit N [Mycobacterium intracellulare ATCC 13950] Length=529 Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/532 (82%), Positives = 466/532 (88%), Gaps = 4/532 (0%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 M LP P ++YFLL+P LIVF +AV GVLAEAFLPRR RY QVTLALGG A +AV+ V Sbjct 1 MTLPTPSIQYFLLSPTLIVFGIAVVGVLAEAFLPRRIRYAGQVTLALGGLIAAFVAVVAV 60 Query 61 ARSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 +RSI SG AAVLGA+A+DR TL+LQGTVLLV +MAV+F+AER+ + + + A Sbjct 61 SRSIKSSGRAAVLGAMAIDRPTLYLQGTVLLVAVMAVIFIAERTQTKTESKVSVATGAGG 120 Query 121 PG-LDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVAL 179 G LDSFTPQASAVP SDAER+AERAGA QTELFPLAMLSVGGMMVFPASNDLLTMFVAL Sbjct 121 TGGLDSFTPQASAVPDSDAEREAERAGAAQTELFPLAMLSVGGMMVFPASNDLLTMFVAL 180 Query 180 EVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRD 239 EVLSLPLYLMCGLAR+RRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTL L GIRD Sbjct 181 EVLSLPLYLMCGLARHRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLLLTGIRD 240 Query 240 ALAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 299 ALA R D S+AL GVALL+VGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG Sbjct 241 ALATRGDSSLALVGVALLSVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 300 Query 300 ALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTG 359 ALLRV+YVALPPLHDQWRPVLW I+ILTM VGT+TAVNQT+VKRMLAYSSVAHVGFILTG Sbjct 301 ALLRVIYVALPPLHDQWRPVLWTISILTMVVGTITAVNQTDVKRMLAYSSVAHVGFILTG 360 Query 360 VIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIV 419 VIADN GLS+TLFYL+AYSFST+GAFAIVGL+R D G EDA LSHWAGLGQRSPIV Sbjct 361 VIADNHTGLSSTLFYLLAYSFSTVGAFAIVGLIRDDD---GVEDAALSHWAGLGQRSPIV 417 Query 420 GVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSM 479 GVM SMFLLAFAGIPLTSGFVSK AVF+AAA GA PLVIVGV++SGVAAYFYVRVIVSM Sbjct 418 GVMFSMFLLAFAGIPLTSGFVSKLAVFKAAAQGGAAPLVIVGVVASGVAAYFYVRVIVSM 477 Query 480 FFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FFTE + DTPHV APG+LSKAAIAVC VTVVLGI PQP+LDLAD AA LL Sbjct 478 FFTEATEDTPHVVAPGILSKAAIAVCAAVTVVLGIFPQPLLDLADHAAHLLH 529 >gi|333991512|ref|YP_004524126.1| NADH dehydrogenase I (chain N) NuoN (NADH- ubiquinone oxidoreductase chain N) [Mycobacterium sp. JDM601] gi|333487480|gb|AEF36872.1| NADH dehydrogenase I (chain N) NuoN (NADH- ubiquinone oxidoreductase chain N) [Mycobacterium sp. JDM601] Length=537 Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/535 (67%), Positives = 419/535 (79%), Gaps = 11/535 (2%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 +P PH+EY LL P+LIVF AV G+L EAF+ RR RY QV LA+GG A A I+++ V R Sbjct 4 MPTPHIEYDLLLPLLIVFGTAVTGMLFEAFVARRARYLMQVLLAIGGLAAAFISLVAVGR 63 Query 63 SIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARV-SPQRQNTLAVARL- 120 + GH VLGAIAVDR L LQG VLLV IMAVVF+AER+ +P+ Sbjct 64 DLPADGHITVLGAIAVDRPALVLQGIVLLVGIMAVVFIAERNTGAGAPEGPGAATAPAAS 123 Query 121 ------PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLT 174 GLDSFTPQASAVPGS AE +A R+G QTE+FPL ML++GGM+VFPA+NDL+T Sbjct 124 PAANGRAGLDSFTPQASAVPGSGAELEAARSGMIQTEVFPLTMLAIGGMLVFPAANDLVT 183 Query 175 MFVALEVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTL 234 MFVALEVLSLPLYL+CGLAR RRLLSQEAA+KYFLLGAFSSA FL+G ALLYG T +LTL Sbjct 184 MFVALEVLSLPLYLLCGLARYRRLLSQEAALKYFLLGAFSSALFLFGAALLYGTTASLTL 243 Query 235 PGIRDALAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATK 294 I + L + +D +AL G LL VGL FKVGAVPFHSW+PDVY GAPTPITGFMAAATK Sbjct 244 SDIGEQLFSHNNDPLALIGAGLLLVGLFFKVGAVPFHSWVPDVYVGAPTPITGFMAAATK 303 Query 295 VAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVG 354 VAAFGA+LR++YVALP LHDQWRP+LW I++LTM V T+ A+ QT +KRMLAYSS+AHVG Sbjct 304 VAAFGAMLRIIYVALPALHDQWRPLLWLISVLTMVVATIAAITQTEIKRMLAYSSIAHVG 363 Query 355 FILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQ 414 F+LTGV++ PAG+S+TLFYL AYSFST+GAFA+V L+R G G E+ D+S WAGLGQ Sbjct 364 FVLTGVLSATPAGVSSTLFYLAAYSFSTVGAFAVVNLIR---GPGGEEELDMSRWAGLGQ 420 Query 415 RSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVR 474 R PIVG++ SMFLLAFAGIPLTSGF+SKFAVF AAA +GAVPLV++GVI+SGVAAYFYVR Sbjct 421 RYPIVGLLFSMFLLAFAGIPLTSGFISKFAVFAAAAESGAVPLVVIGVIASGVAAYFYVR 480 Query 475 VIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQL 529 VIV MFFT+ + P + P V SK AIA+C VTVVLG+ PQP+LDL + A Q Sbjct 481 VIVLMFFTDSPDNPPQLVQPSVWSKTAIALCAAVTVVLGVFPQPLLDLVNAATQF 535 >gi|126434132|ref|YP_001069823.1| NADH dehydrogenase subunit N [Mycobacterium sp. JLS] gi|126233932|gb|ABN97332.1| NADH dehydrogenase subunit N [Mycobacterium sp. JLS] Length=524 Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/532 (67%), Positives = 419/532 (79%), Gaps = 10/532 (1%) Query 2 ILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVA 61 ++P P VEY L++PMLIV A+AGVL EAFLPRR RY AQ+TLALG + AL AV+VV+ Sbjct 1 MIPTPTVEYGLISPMLIVVGAAIAGVLIEAFLPRRSRYAAQLTLALGATVAALAAVVVVS 60 Query 62 RSIHGS-GHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 R + G G +AV+G++ VDR LFLQGT+LLV ++ ++ +AER + ++ A Sbjct 61 RQMSGEIGRSAVMGSVVVDRPALFLQGTILLVAVLGILLIAERQIPAGTETEDGTA---- 116 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 GLD+FTPQASAVPGS AER A RAG QTE+FPL M +V GM++FPA++DLLTMF+ALE Sbjct 117 -GLDAFTPQASAVPGSVAERVATRAGVAQTEVFPLTMFAVAGMLLFPAADDLLTMFIALE 175 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYL+CGLAR RRLLSQEAA+KYFLLGAFSSAFFLYGVA+LYG GTL L GI Sbjct 176 VLSLPLYLLCGLARRRRLLSQEAALKYFLLGAFSSAFFLYGVAMLYGYAGTLDLRGIAAV 235 Query 241 LAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 299 +A T S+AL G L+ VG+LFKVGA PFHSWIPDVYQGAPTP+T FMAAATK+AAFG Sbjct 236 VAEDTGRTSLALTGTGLILVGVLFKVGAAPFHSWIPDVYQGAPTPVTAFMAAATKIAAFG 295 Query 300 ALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTG 359 ALLR+ YVALP L D WRPVLWA+AILTM VGTVTAV QT+VKRMLAYS++AH GFILTG Sbjct 296 ALLRIFYVALPELRDDWRPVLWAVAILTMVVGTVTAVTQTDVKRMLAYSAIAHSGFILTG 355 Query 360 VIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIV 419 VIA+N GLS+ LFYL AY FST+GAFA+VGLVR AD G ED ++ WAGLG+R+P+V Sbjct 356 VIAENRPGLSSVLFYLFAYGFSTLGAFAVVGLVRDAD---GQEDTAMARWAGLGRRNPLV 412 Query 420 GVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSM 479 G + S+FLLAFAGIPLTSGFVSKFAVF+AA GA+PLV+VGVI+S +AAYFYVRVIV M Sbjct 413 GAVFSLFLLAFAGIPLTSGFVSKFAVFKAAGQGGAIPLVVVGVIASAIAAYFYVRVIVLM 472 Query 480 FFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FFT+ D P + P L+ AAI V VT+ LG PQP+LDLA+ A LR Sbjct 473 FFTDPPADAPTIVVPSGLTTAAITVTAAVTLALGALPQPLLDLANDADLFLR 524 >gi|108798534|ref|YP_638731.1| NADH dehydrogenase subunit N [Mycobacterium sp. MCS] gi|119867634|ref|YP_937586.1| NADH dehydrogenase subunit N [Mycobacterium sp. KMS] gi|108768953|gb|ABG07675.1| NADH dehydrogenase subunit N [Mycobacterium sp. MCS] gi|119693723|gb|ABL90796.1| NADH dehydrogenase subunit N [Mycobacterium sp. KMS] Length=524 Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/532 (66%), Positives = 419/532 (79%), Gaps = 10/532 (1%) Query 2 ILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVA 61 ++P P VEY L++PMLIV A+AGVL EAFLPRR RY AQ+TLALG + AL AV+VV+ Sbjct 1 MIPTPTVEYGLISPMLIVVGAAIAGVLVEAFLPRRSRYAAQLTLALGATVAALAAVVVVS 60 Query 62 RSIHGS-GHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 R + G G +AV+G++ VDR LFLQGT+LLV ++ ++ +AER + ++ A Sbjct 61 RQMSGEIGRSAVMGSVVVDRPALFLQGTILLVAVLGILLIAERQIPAGTETEDAAA---- 116 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 GLD+FTPQASAVPGS AER A RAG QTE+FPL M +V GM++FPAS+DLLTMF+ALE Sbjct 117 -GLDAFTPQASAVPGSVAERVATRAGVAQTEVFPLTMFAVAGMLLFPASDDLLTMFIALE 175 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYL+CGLAR RRLLSQEAA+KYFLLGAFSSAFFLYG+A+LYG GTL L GI Sbjct 176 VLSLPLYLLCGLARRRRLLSQEAALKYFLLGAFSSAFFLYGIAMLYGYAGTLDLRGIAAV 235 Query 241 LAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 299 +A T S+AL G L+ VG+LFKVGA PFHSWIPDVYQGAPTP+T FMAAATK+AAFG Sbjct 236 VAEDTGTTSLALTGTGLILVGVLFKVGAAPFHSWIPDVYQGAPTPVTAFMAAATKIAAFG 295 Query 300 ALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTG 359 ALLR+ YVALP L D WRPVLWA+AILTM VGTVTAV QT+VKRMLAYS++AH GFILTG Sbjct 296 ALLRIFYVALPELRDDWRPVLWAVAILTMVVGTVTAVTQTDVKRMLAYSAIAHSGFILTG 355 Query 360 VIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIV 419 VIA+N GLS+ LFYL AY FST+GAFA+VGLVR A+ G ED ++ WAGLG+R+P+V Sbjct 356 VIAENRPGLSSVLFYLFAYGFSTLGAFAVVGLVRDAN---GQEDTAMARWAGLGRRNPLV 412 Query 420 GVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSM 479 G + S+FLLAFAGIPLTSGFVSKFAVF+AA GA+PLV+VGVI+S +AAYFYVR+IV M Sbjct 413 GAVFSLFLLAFAGIPLTSGFVSKFAVFKAAGQGGAIPLVVVGVIASAIAAYFYVRLIVLM 472 Query 480 FFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 FFT+ D P V P L+ AAI V VT+ LG PQP+LDLA+ A LR Sbjct 473 FFTDSPADAPTVVVPSGLTTAAITVTAAVTLALGALPQPLLDLANNADLFLR 524 >gi|111022885|ref|YP_705857.1| NADH dehydrogenase subunit N [Rhodococcus jostii RHA1] gi|110822415|gb|ABG97699.1| probable NADH dehydrogenase subunit N [Rhodococcus jostii RHA1] Length=539 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/534 (68%), Positives = 417/534 (79%), Gaps = 13/534 (2%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 L AP +EY LAPMLIVF VAVAGVL EAFLPRR RY + + LALGG A +AV+++A Sbjct 14 LRAPDIEYGQLAPMLIVFGVAVAGVLVEAFLPRRGRYSSHLVLALGGLTAAFVAVVMLA- 72 Query 63 SIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSA----RVSPQRQNTLAVA 118 G+ + V GA+AVD TLFLQGT+LL++I A++ +AERS RV+ Sbjct 73 ---GTRDSTVAGAVAVDGPTLFLQGTILLISIPAILLIAERSVDSGVRVATAEVTAATAE 129 Query 119 RLPGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVA 178 G D+FTPQA AVPGS AER+A + TE+FPLA+ +VGGM++FPASNDLLTMFVA Sbjct 130 PEGGTDAFTPQAFAVPGSVAEREATKNAPGHTEVFPLALFAVGGMLLFPASNDLLTMFVA 189 Query 179 LEVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIR 238 LEVLSLPLYL+CGLAR RRLLSQEAA+KYFLLGAFSSAFFL+GVALLYG GT+ LP I Sbjct 190 LEVLSLPLYLLCGLARRRRLLSQEAALKYFLLGAFSSAFFLFGVALLYGYAGTVELPRIA 249 Query 239 DALAARTDD-SMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAA 297 DALA TDD ++AL G ALL+VGLLFK+GAVPFHSWIPDVYQGAPTPIT FMAAATKVAA Sbjct 250 DALARGTDDKTLALIGTALLSVGLLFKIGAVPFHSWIPDVYQGAPTPITAFMAAATKVAA 309 Query 298 FGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFIL 357 GA+LR+ YVALP L WRPV+W +AILTM VG V AV Q +VKRMLAYSSVAH GFIL Sbjct 310 VGAMLRIFYVALPDLRADWRPVMWGVAILTMVVGAVMAVTQNDVKRMLAYSSVAHAGFIL 369 Query 358 TGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSP 417 TG+IA N AGLS+T+FYL+AY FST+GAFA+V LVR + G E DLS WAGLG+RSP Sbjct 370 TGLIAANRAGLSSTMFYLLAYGFSTLGAFAVVTLVRDSRG----EATDLSRWAGLGRRSP 425 Query 418 IVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIV 477 +VG + ++FLLAFAGIPLTSGFVSKFAVF+AA GAVPLV+VGV+SS +AA+FYVRVIV Sbjct 426 LVGGVFALFLLAFAGIPLTSGFVSKFAVFQAAIEGGAVPLVLVGVVSSAIAAFFYVRVIV 485 Query 478 SMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 MFF+E D P + P + + AAIAV VVTVVLGI PQ LDLADQAA R Sbjct 486 LMFFSEPQSDAPTIVVPSMFTAAAIAVGVVVTVVLGILPQGALDLADQAAVFFR 539 >gi|229490826|ref|ZP_04384661.1| NADH-quinone oxidoreductase subunit n [Rhodococcus erythropolis SK121] gi|229322216|gb|EEN88002.1| NADH-quinone oxidoreductase subunit n [Rhodococcus erythropolis SK121] Length=531 Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/530 (64%), Positives = 413/530 (78%), Gaps = 18/530 (3%) Query 5 APHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVARSI 64 +P VEY LL+PMLIVF VAV GVL EAF PRR+RY Q+ L + G A A +AV+++A Sbjct 17 SPSVEYSLLSPMLIVFGVAVVGVLIEAFAPRRFRYPVQLVLGVAGLAAAFVAVLLLA--- 73 Query 65 HGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLPGLD 124 G+ A++G++AVD TLFLQ T+LLV+I AV+ +AER + + + +A+ L Sbjct 74 -GTRSTAMMGSVAVDGPTLFLQATILLVSIPAVLLIAERGSGNTAE-----VIAQHDALG 127 Query 125 SFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVLSL 184 FTPQAS+VPGS AE++A + G QTE+FPL + +VGGM++FPASNDLLTMFVALEV SL Sbjct 128 GFTPQASSVPGSVAEQEAVKVGIAQTEVFPLTLFAVGGMLLFPASNDLLTMFVALEVFSL 187 Query 185 PLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDALAAR 244 PLYL+CGLAR RRLLSQEAA+KYFLLGAFSSAFF++G+ALLYG GT+TL GI DA AR Sbjct 188 PLYLLCGLARRRRLLSQEAALKYFLLGAFSSAFFVFGIALLYGYAGTVTLSGIADA--AR 245 Query 245 T---DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGAL 301 + D+ G AL+AVGLLFKVGAVPFHSWIPDVYQGAPTPIT FMA ATK+AAFGA+ Sbjct 246 SGSGTDAFLWLGTALVAVGLLFKVGAVPFHSWIPDVYQGAPTPITSFMATATKIAAFGAI 305 Query 302 LRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGVI 361 LRV YVALP + WRP++WA+AILTM VG++ AV QT++KRMLAYS++AH GFILT V+ Sbjct 306 LRVFYVALPNEYVNWRPLMWAVAILTMVVGSIVAVTQTDMKRMLAYSAIAHTGFILTAVV 365 Query 362 ADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVGV 421 AD+ AGL++ +FYL+AY FST+GAFA+V LVR ADG E A LS WAGLG+RSP+VGV Sbjct 366 ADSDAGLASAMFYLLAYGFSTVGAFAVVSLVRDADG----EVATLSRWAGLGRRSPLVGV 421 Query 422 MLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMFF 481 + ++FLLAFAGIPLTSGF+ KFAVF AAA GA PLVIVGV+ S +AAYFYVRVIV MFF Sbjct 422 VFALFLLAFAGIPLTSGFIGKFAVFSAAAEGGAAPLVIVGVLCSAIAAYFYVRVIVLMFF 481 Query 482 TEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 TE + D P V P L+ + I + VT++LGI PQP LDLA++AA L Sbjct 482 TESAADAPTVVVPSALTSSVIGLGAGVTLILGILPQPALDLAERAADFLH 531 >gi|120402870|ref|YP_952699.1| NADH dehydrogenase subunit N [Mycobacterium vanbaalenii PYR-1] gi|119955688|gb|ABM12693.1| NADH dehydrogenase subunit N [Mycobacterium vanbaalenii PYR-1] Length=523 Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/532 (66%), Positives = 418/532 (79%), Gaps = 11/532 (2%) Query 1 MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV 60 M +P P VEY L++PMLIV + AV GVL EAF+PR RY QVTL++ + +AV++V Sbjct 1 MNIPTPTVEYGLISPMLIVLAAAVLGVLVEAFVPRGRRYAVQVTLSIAALVASFVAVVLV 60 Query 61 ARSIHG-SGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVAR 119 AR +HG SG AV+GAIAVD LFLQGT+L+V ++ ++ + ER ++S +T Sbjct 61 ARDLHGGSGSEAVMGAIAVDMPALFLQGTILVVGVLGILLIGER--QISAPGPDTEG--- 115 Query 120 LPGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVAL 179 GL++FTPQASAVPGS AE+ A RAG QTE+FPL + ++GGM++FPA+NDLLTMF+AL Sbjct 116 -RGLEAFTPQASAVPGSVAEKLATRAGVIQTEVFPLTLFAIGGMLLFPAANDLLTMFIAL 174 Query 180 EVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRD 239 EVLSLPLYL+CGLAR RRLLSQEA++KYFLLGAFSSA FLYG A+LYG GTL L GI D Sbjct 175 EVLSLPLYLLCGLARRRRLLSQEASLKYFLLGAFSSAIFLYGAAMLYGYAGTLQLDGIAD 234 Query 240 ALAARTD-DSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAF 298 A+AA T S+AL G+ALL VG+LFKVGAVPFHSWIPDVYQGAPTPIT FMAAATK+AAF Sbjct 235 AVAAGTGRTSLALIGIALLLVGVLFKVGAVPFHSWIPDVYQGAPTPITAFMAAATKIAAF 294 Query 299 GALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILT 358 GA+LR+ YVALP L D WRPVLWAIAILTM VGTVTAV Q +VKRML YS+VAH GFILT Sbjct 295 GAMLRLFYVALPGLRDDWRPVLWAIAILTMVVGTVTAVTQNDVKRMLGYSAVAHSGFILT 354 Query 359 GVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPI 418 GVIA + AGLS+TLFYL AY FST+GAFA+V LVR AD G ED+ ++ WAGLG+R P+ Sbjct 355 GVIAGSAAGLSSTLFYLFAYGFSTVGAFAVVSLVRDAD---GEEDSAMARWAGLGKRYPV 411 Query 419 VGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVS 478 VG++ S+FLLAFAGIPLTSGFVSKFAVF+AA GA+PLV+VGVI+S +AAYFYVRVI+ Sbjct 412 VGIVFSLFLLAFAGIPLTSGFVSKFAVFKAAGEGGAIPLVVVGVIASAIAAYFYVRVIML 471 Query 479 MFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLL 530 MFFT+ D P V P L+ A + V VT LG PQP+LDLA+ A + L Sbjct 472 MFFTDRPDDAPTVVVPSALTTAVVTVTAAVTFALGALPQPLLDLANAADRFL 523 >gi|226306201|ref|YP_002766161.1| NADH-quinone oxidoreductase chain N [Rhodococcus erythropolis PR4] gi|226185318|dbj|BAH33422.1| NADH-quinone oxidoreductase chain N [Rhodococcus erythropolis PR4] Length=531 Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/529 (64%), Positives = 415/529 (79%), Gaps = 16/529 (3%) Query 5 APHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVARSI 64 +P +EY LL+PMLIVF VAV GVL EAF PRR RY Q+ L +GG A A +AV+++A Sbjct 17 SPSIEYSLLSPMLIVFGVAVVGVLIEAFAPRRIRYPVQLVLGVGGLAAAFVAVLLLA--- 73 Query 65 HGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLPGLD 124 G+ A++G++AVD TLFLQ T+LLV+I AV+ +AER + + + +A+ L Sbjct 74 -GTRSTAMMGSVAVDGPTLFLQATILLVSIPAVLLIAERGSGNTAE-----VIAQHDALG 127 Query 125 SFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVLSL 184 SFTPQAS+VPGS AE++A + G QTE+FPL + +VGGM++FPASNDLLTMFVALEV SL Sbjct 128 SFTPQASSVPGSVAEQEAVKVGIAQTEVFPLTLFAVGGMLLFPASNDLLTMFVALEVFSL 187 Query 185 PLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA--LA 242 PLYL+CGLAR RRLLSQEAA+KYFLLGAFSSAFF++G+ALLYG GT+TL GI DA + Sbjct 188 PLYLLCGLARRRRLLSQEAALKYFLLGAFSSAFFVFGIALLYGYAGTVTLSGIADAARIG 247 Query 243 ARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGALL 302 + TD + L G AL+AVGLLFKVGAVPFHSWIPDVYQGAPTPIT FMA ATK+AAFGA+L Sbjct 248 SGTDAFLWL-GTALVAVGLLFKVGAVPFHSWIPDVYQGAPTPITSFMATATKIAAFGAIL 306 Query 303 RVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGVIA 362 RV YVALP + WRP++WA+AILTM VG++ AV QT++KRMLAYS++AH GFILT V+A Sbjct 307 RVFYVALPNEYVNWRPLMWAVAILTMVVGSIVAVTQTDMKRMLAYSAIAHTGFILTAVVA 366 Query 363 DNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVGVM 422 D+ AGL++ +FYL+AY FST+GAFA+V +VR ADG E A LS WAGLG+RSP+VGV+ Sbjct 367 DSDAGLASAMFYLLAYGFSTVGAFAVVSVVRDADG----EVAALSRWAGLGRRSPLVGVV 422 Query 423 LSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMFFT 482 ++FLLAFAGIPLTSGF+ KFAVF AAA GA PLVIVGV+ S +AAYFYVRVIV MFFT Sbjct 423 FALFLLAFAGIPLTSGFIGKFAVFSAAAEGGAAPLVIVGVLCSAIAAYFYVRVIVLMFFT 482 Query 483 EESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 E + D P V P L+ + I + VT++LGI PQP LDLA++AA + Sbjct 483 ESAEDAPTVVVPSALTSSVIGLGAGVTLILGILPQPALDLAERAADFVH 531 >gi|226365393|ref|YP_002783176.1| NADH dehydrogenase subunit N [Rhodococcus opacus B4] gi|288559088|sp|C1AZG0.1|NUON_RHOOB RecName: Full=NADH-quinone oxidoreductase subunit N; AltName: Full=NADH dehydrogenase I subunit N; AltName: Full=NDH-1 subunit N gi|226243883|dbj|BAH54231.1| NADH-quinone oxidoreductase chain N [Rhodococcus opacus B4] Length=540 Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/535 (67%), Positives = 416/535 (78%), Gaps = 14/535 (2%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 +PAP +EY L+PMLIVF VAVAGVL EAFLPRR RY + + LALGG A +AV+++A Sbjct 14 VPAPDIEYGQLSPMLIVFGVAVAGVLVEAFLPRRGRYSSHLVLALGGLTAAFVAVVLLA- 72 Query 63 SIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLP- 121 G+ + V GA+AVD TLFLQGT+LL++I A++ +AERS A Sbjct 73 ---GTRDSVVGGAVAVDGPTLFLQGTILLISIPAILIIAERSVDSGVAAATAEVTAVRGA 129 Query 122 ----GLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFV 177 G D+FTPQA AVPGS AER+A R TE+FPL + +VGGM++FPASNDLLTMFV Sbjct 130 EPEGGTDAFTPQAFAVPGSVAEREATRNAPGHTEVFPLTLFAVGGMLLFPASNDLLTMFV 189 Query 178 ALEVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGI 237 ALEVLSLPLYL+CGLAR RRLLSQEAA+KYFLLGAFSSAFFL+GVALLYG GT+ LPGI Sbjct 190 ALEVLSLPLYLLCGLARRRRLLSQEAALKYFLLGAFSSAFFLFGVALLYGYAGTVALPGI 249 Query 238 RDALAARTDD-SMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVA 296 DALA T+D ++AL G ALL+VGLLFK+GAVPFHSWIPDVYQGAPTPIT FMAAATKVA Sbjct 250 ADALARGTEDRTLALIGTALLSVGLLFKIGAVPFHSWIPDVYQGAPTPITAFMAAATKVA 309 Query 297 AFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFI 356 A GA+LR+ YVALP L WRPV+W +AILTM VG V AV Q +VKRMLAYSSVAH GFI Sbjct 310 AVGAMLRIFYVALPDLRADWRPVMWGVAILTMVVGAVMAVTQNDVKRMLAYSSVAHAGFI 369 Query 357 LTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRS 416 LTG++A N AGLS+T+FYL+AY FST+GAFA+V LVR + G E DLS WAGLG+RS Sbjct 370 LTGLVAANRAGLSSTMFYLLAYGFSTLGAFAVVTLVRDSRG----EATDLSRWAGLGRRS 425 Query 417 PIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVI 476 P+VG + ++FLLAFAGIPLTSGFVSKFAVF+AA GAVPLV+VGV+SS +AA+FYVRVI Sbjct 426 PLVGGVFALFLLAFAGIPLTSGFVSKFAVFQAALEGGAVPLVLVGVVSSAIAAFFYVRVI 485 Query 477 VSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 V MFF+E D P + P + + AAIAV VVTVVLGI PQ LDLADQAA R Sbjct 486 VLMFFSEPQSDAPTIVVPSMFTAAAIAVGVVVTVVLGILPQGALDLADQAAVFFR 540 >gi|145225073|ref|YP_001135751.1| NADH dehydrogenase subunit N [Mycobacterium gilvum PYR-GCK] gi|145217559|gb|ABP46963.1| NADH dehydrogenase subunit N [Mycobacterium gilvum PYR-GCK] Length=527 Score = 629 bits (1623), Expect = 3e-178, Method: Compositional matrix adjust. Identities = 345/530 (66%), Positives = 408/530 (77%), Gaps = 11/530 (2%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 LP P VEYF L+PMLIV AV GVL EA LPR RY AQ L+L A +AV++VAR Sbjct 7 LPTPTVEYFFLSPMLIVLGAAVLGVLVEALLPRHLRYRAQAGLSLAALLAAFVAVVMVAR 66 Query 63 SIHGSGH-AAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLP 121 + G +AV+GA+AVD LFLQGT+L V ++ V+ + ER V +N Sbjct 67 DLPADGAVSAVMGAVAVDMPALFLQGTILAVGVLGVLLIGERQIGVVEDSENG------R 120 Query 122 GLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEV 181 GLD+FTPQASAV GS AE+ A RAG QTE+FPL M +V GM++FPA++DLLTMF+ALEV Sbjct 121 GLDAFTPQASAVAGSVAEKVAARAGNIQTEVFPLTMFAVAGMLLFPAADDLLTMFIALEV 180 Query 182 LSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDAL 241 LSLPLYL+CG+AR RRLLSQE+A+KYFLLGAFSSAFFLYG A+LYG GTL+ PGI DA+ Sbjct 181 LSLPLYLLCGMARRRRLLSQESAVKYFLLGAFSSAFFLYGAAMLYGYAGTLSFPGIADAV 240 Query 242 AART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 A T S+ L GVALL VG+LFK+GAVPFHSWIPDVYQGAPTPIT FMAAATK+AAFGA Sbjct 241 ADGTGTTSLGLIGVALLLVGILFKIGAVPFHSWIPDVYQGAPTPITAFMAAATKIAAFGA 300 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 +LR+ YVALP L D WRPVLWAIAILTM VGTVTAV QT+VKRML YS+VAH GFILTGV Sbjct 301 MLRLFYVALPGLRDDWRPVLWAIAILTMVVGTVTAVTQTDVKRMLGYSAVAHTGFILTGV 360 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 IA N AG+S+TLFYL AY FST+GAFA+VGLVR +D G ED ++ WAGLG+R P+VG Sbjct 361 IAGNDAGVSSTLFYLFAYGFSTVGAFAVVGLVRNSD---GEEDTAMARWAGLGKRYPLVG 417 Query 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 ++ S+FLLAFAGIPLTSGFV KFAVF+AA GA+PLV+VGV++S +AAYFYVRVIV MF Sbjct 418 IVFSLFLLAFAGIPLTSGFVGKFAVFKAAGEGGAIPLVVVGVVASAIAAYFYVRVIVLMF 477 Query 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLL 530 FT+ D P V P VL+ A + V VT +LG PQP+LDLAD A + Sbjct 478 FTDSPDDAPAVVVPSVLTTAVVTVTAAVTFMLGALPQPLLDLADSADRFF 527 >gi|315445442|ref|YP_004078321.1| NADH dehydrogenase subunit N [Mycobacterium sp. Spyr1] gi|315263745|gb|ADU00487.1| NADH dehydrogenase subunit N [Mycobacterium sp. Spyr1] Length=527 Score = 629 bits (1623), Expect = 3e-178, Method: Compositional matrix adjust. Identities = 345/530 (66%), Positives = 408/530 (77%), Gaps = 11/530 (2%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 LP P VEYF L+PML+V AV GVL EA LPR RY AQ L+L A +AV++VAR Sbjct 7 LPTPTVEYFFLSPMLVVLGAAVLGVLVEALLPRHLRYRAQAGLSLAALLAAFVAVVMVAR 66 Query 63 SIHGSGH-AAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLP 121 + G +AV+GA+AVD LFLQGT+L V ++ V+ + ER V +N Sbjct 67 DLPADGAVSAVMGAVAVDMPALFLQGTILAVGVLGVLLIGERQIGVVEDSENG------R 120 Query 122 GLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEV 181 GLD+FTPQASAV GS AE+ A RAG QTE+FPL M +V GM++FPA++DLLTMF+ALEV Sbjct 121 GLDAFTPQASAVAGSVAEKVAARAGNIQTEVFPLTMFAVAGMLLFPAADDLLTMFIALEV 180 Query 182 LSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDAL 241 LSLPLYL+CGLAR RRLLSQE+A+KYFLLGAFSSAFFLYG A+LYG GTL+ PGI DA+ Sbjct 181 LSLPLYLLCGLARRRRLLSQESAVKYFLLGAFSSAFFLYGAAMLYGYAGTLSFPGIADAV 240 Query 242 AART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 A T S+ L GVALL VG+LFK+GAVPFHSWIPDVYQGAPTPIT FMAAATK+AAFGA Sbjct 241 ADGTGTTSLGLIGVALLLVGILFKIGAVPFHSWIPDVYQGAPTPITAFMAAATKIAAFGA 300 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 +LR+ YVALP L D WRPVLWAIAILTM VGTVTAV QT+VKRML YS+VAH GFILTGV Sbjct 301 MLRLFYVALPGLRDDWRPVLWAIAILTMVVGTVTAVTQTDVKRMLGYSAVAHTGFILTGV 360 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 IA N AG+S+TLFYL AY FST+GAFA+VGLVR +D G ED ++ WAGLG+R P+VG Sbjct 361 IAGNDAGVSSTLFYLFAYGFSTVGAFAVVGLVRNSD---GEEDTVMARWAGLGKRYPLVG 417 Query 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 ++ S+FLLAFAGIPLTSGFV KFAVF+AA GA+PLV+VGV++S +AAYFYVRVIV MF Sbjct 418 IVFSLFLLAFAGIPLTSGFVGKFAVFKAAGEGGAIPLVVVGVVASAIAAYFYVRVIVLMF 477 Query 481 FTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLL 530 FT+ D P V P VL+ A + V VT +LG PQP+LDLAD A + Sbjct 478 FTDSPDDAPAVVVPSVLTTAVVTVTAAVTFMLGALPQPLLDLADSADRFF 527 >gi|118470109|ref|YP_886411.1| NADH dehydrogenase subunit N [Mycobacterium smegmatis str. MC2 155] gi|118171396|gb|ABK72292.1| NADH-quinone oxidoreductase, N subunit [Mycobacterium smegmatis str. MC2 155] Length=521 Score = 628 bits (1620), Expect = 7e-178, Method: Compositional matrix adjust. Identities = 348/528 (66%), Positives = 416/528 (79%), Gaps = 12/528 (2%) Query 6 PHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVARSIH 65 P +EY LL+PMLIVF VA+AGVL EA PR+ RY QVTLALGG ++AV+ VAR + Sbjct 4 PSIEYGLLSPMLIVFGVAIAGVLIEALAPRQSRYPLQVTLALGGLIATVVAVVFVARGLS 63 Query 66 GS-GHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLPGLD 124 G+ G AVLGA+ +D +FLQGT+ LV I+ ++ +AER ++ T++ GL+ Sbjct 64 GTPGRPAVLGAVVLDAPAVFLQGTIALVGILGIMLIAER-------QKATVSAGEARGLE 116 Query 125 SFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVLSL 184 FTPQASAV GS AE+ A + G QTE+FPL M ++GGM++FPA++DLLTMFVALEVLSL Sbjct 117 DFTPQASAVAGSVAEQLATKTGVMQTEVFPLTMFAIGGMLLFPAADDLLTMFVALEVLSL 176 Query 185 PLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDALAAR 244 PLYL+CGLAR RRLLSQEAA+KYFLLGAFSSAFF+YG A+LYG+ GTL L GI +++AA Sbjct 177 PLYLLCGLARRRRLLSQEAALKYFLLGAFSSAFFIYGAAMLYGSAGTLDLSGIAESVAAG 236 Query 245 T-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGALLR 303 + + S+AL GVALL VG+LFKVGAVPFHSWIPDVYQGAPT IT FMAAATK+AAFGA+LR Sbjct 237 SGNTSLALLGVALLLVGVLFKVGAVPFHSWIPDVYQGAPTSITAFMAAATKIAAFGAMLR 296 Query 304 VVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGVIAD 363 + YVA+P L D WRPVLWAIAILTM VGTVTAV QT+VKRMLAYS+VAH GFILTGVIA Sbjct 297 IFYVAVPALRDDWRPVLWAIAILTMVVGTVTAVTQTDVKRMLAYSAVAHSGFILTGVIAA 356 Query 364 NPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVGVML 423 NPAG+S+TLFYL AY FST+GAFA+VGL+R A AG E+ ++ WAGLG+R PIVGV+ Sbjct 357 NPAGVSSTLFYLFAYGFSTLGAFAVVGLIRNA---AGDEETSMAQWAGLGRRYPIVGVVF 413 Query 424 SMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMFFTE 483 S+FLLAFAGIPLTSGFVSKFAVF+AA GA+PLVI+GVI+S VAAYFYVRVIV MFFTE Sbjct 414 SLFLLAFAGIPLTSGFVSKFAVFKAAGEGGAIPLVIIGVIASAVAAYFYVRVIVLMFFTE 473 Query 484 ESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 D P + P LS A + V VT LG PQP+LDLA+ A L Sbjct 474 PPDDAPELVVPSGLSTAVVTVTAAVTFALGALPQPLLDLANSAETFLH 521 >gi|312139321|ref|YP_004006657.1| NADH dehydrogenase (quinone) chain n nuon [Rhodococcus equi 103S] gi|311888660|emb|CBH47972.1| NADH dehydrogenase (quinone) chain N NuoN [Rhodococcus equi 103S] Length=528 Score = 624 bits (1609), Expect = 1e-176, Method: Compositional matrix adjust. Identities = 342/532 (65%), Positives = 420/532 (79%), Gaps = 12/532 (2%) Query 2 ILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVA 61 +LPAP +EY LL+PMLIVF AV GVL EAF PRR RY A + L G A +AVI +A Sbjct 5 VLPAPSIEYSLLSPMLIVFGAAVVGVLVEAFWPRRTRYTAHLVLTFGALGSAGVAVIALA 64 Query 62 RSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAV-ARL 120 G+ +A +G++A+D TLFLQGTVL V++++ + +A+R + +++V AR Sbjct 65 ----GTRQSAAVGSVAIDGPTLFLQGTVLCVSLLSALLVADRGLDRAAASAESVSVGAR- 119 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 G+D+FTP+ASAVPGSDAER+A RAG TQTE+FPLA+ ++GGM++FPA++DLLTMFVALE Sbjct 120 -GVDAFTPRASAVPGSDAEREAARAGVTQTEVFPLALFAIGGMLLFPAADDLLTMFVALE 178 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYL+CGLAR RRLLSQEAA+KYFLLGAFSSAFF++G ALLYG GT+ L GI A Sbjct 179 VLSLPLYLLCGLARRRRLLSQEAALKYFLLGAFSSAFFVFGTALLYGYAGTVDLTGIGRA 238 Query 241 LAARTDDSM-ALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 299 + + +D + A G+A+L+VGLLFK+GAVPFHSWIPDVYQGAPTPIT FMA+ATK+AAFG Sbjct 239 VEEQANDVLLARMGLAMLSVGLLFKIGAVPFHSWIPDVYQGAPTPITAFMASATKIAAFG 298 Query 300 ALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTG 359 A LRV YVA+P L WRPVLWA+AILTM VG + A+ Q++VKRMLAYSSVAH GFILTG Sbjct 299 ATLRVFYVAVPGLSVDWRPVLWAVAILTMLVGALLAITQSDVKRMLAYSSVAHAGFILTG 358 Query 360 VIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIV 419 VIA N AG+SA+LFYL+AY FST+GAF +V LVR A +G+E DL+ WAGLG+ SP++ Sbjct 359 VIAGNDAGISASLFYLLAYGFSTLGAFGVVSLVRDA---SGAEITDLARWAGLGRTSPLL 415 Query 420 GVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSM 479 ++ LL+FAGIPLTSGF+SKFAVF AAAS GAVPLVIVGV+SS VAA FYVRVIV M Sbjct 416 AATFALLLLSFAGIPLTSGFISKFAVFEAAASGGAVPLVIVGVVSSAVAAVFYVRVIVLM 475 Query 480 FFTEESGD-TPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLL 530 FF + D +P V P + AA+AV VVT+VLGIAPQPVLDLA+QAA L Sbjct 476 FFADPPEDASPVVVVPSAPTVAAVAVAAVVTLVLGIAPQPVLDLAEQAAHFL 527 >gi|325676670|ref|ZP_08156345.1| NADH-quinone oxidoreductase subunit N [Rhodococcus equi ATCC 33707] gi|325552525|gb|EGD22212.1| NADH-quinone oxidoreductase subunit N [Rhodococcus equi ATCC 33707] Length=528 Score = 621 bits (1601), Expect = 1e-175, Method: Compositional matrix adjust. Identities = 341/532 (65%), Positives = 419/532 (79%), Gaps = 12/532 (2%) Query 2 ILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVA 61 +LPAP +EY LL+PMLIVF AV GVL EAF PRR RY A + L G A +AVI +A Sbjct 5 VLPAPSIEYSLLSPMLIVFGAAVVGVLVEAFWPRRTRYTAHLVLTFGALGSAGVAVIALA 64 Query 62 RSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAV-ARL 120 G+ +A +G++A+D TLFLQGTVL V++++ + +A+R + +++V AR Sbjct 65 ----GTRQSAAVGSVAIDGPTLFLQGTVLCVSLLSALLVADRGLDRAAASAESVSVGAR- 119 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 G+D+FTP+ASAVPGSDAER+A RAG TQTE+FPLA+ ++GGM++FPA++DLLTMFVALE Sbjct 120 -GVDAFTPRASAVPGSDAEREAARAGVTQTEVFPLALFAIGGMLLFPAADDLLTMFVALE 178 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYL+CGLAR RRLLSQEAA+KYFLLGAFSSAFF++G ALLYG GT+ L GI A Sbjct 179 VLSLPLYLLCGLARRRRLLSQEAALKYFLLGAFSSAFFVFGTALLYGYAGTVDLTGIGRA 238 Query 241 LAARTDDSM-ALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFG 299 + + +D + A G+A+L+VGLLFK+GAVPFHSWIPDVYQGAPTPIT FMA+ATK+AAFG Sbjct 239 VEEQANDVLLARMGLAMLSVGLLFKIGAVPFHSWIPDVYQGAPTPITAFMASATKIAAFG 298 Query 300 ALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTG 359 A LRV YVA+P L WRPVLWA+AILTM VG + A+ Q++VKRMLAYSSVAH GFILTG Sbjct 299 ATLRVFYVAVPGLSVDWRPVLWAVAILTMLVGALLAITQSDVKRMLAYSSVAHAGFILTG 358 Query 360 VIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIV 419 VIA N AG+SA+LFYL+AY FST+GAF +V LVR A +G+E L+ WAGLG+ SP++ Sbjct 359 VIAGNDAGISASLFYLLAYGFSTLGAFGVVSLVRDA---SGAEITALARWAGLGRTSPLL 415 Query 420 GVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSM 479 ++ LL+FAGIPLTSGF+SKFAVF AAAS GAVPLVIVGV+SS VAA FYVRVIV M Sbjct 416 AATFALLLLSFAGIPLTSGFISKFAVFEAAASGGAVPLVIVGVVSSAVAAVFYVRVIVLM 475 Query 480 FFTEESGD-TPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLL 530 FF + D +P V P + AA+AV VVT+VLGIAPQPVLDLA+QAA L Sbjct 476 FFADPPEDASPVVVVPSAPTVAAVAVAAVVTLVLGIAPQPVLDLAEQAAHFL 527 >gi|254391150|ref|ZP_05006357.1| NADH dehydrogenase subunit N [Streptomyces clavuligerus ATCC 27064] gi|294814407|ref|ZP_06773050.1| NADH-quinone oxidoreductase subunit N [Streptomyces clavuligerus ATCC 27064] gi|326442797|ref|ZP_08217531.1| NADH:ubiquinone oxidoreductase subunit N [Streptomyces clavuligerus ATCC 27064] gi|197704844|gb|EDY50656.1| NADH dehydrogenase subunit N [Streptomyces clavuligerus ATCC 27064] gi|294327006|gb|EFG08649.1| NADH-quinone oxidoreductase subunit N [Streptomyces clavuligerus ATCC 27064] Length=549 Score = 593 bits (1528), Expect = 3e-167, Method: Compositional matrix adjust. Identities = 318/543 (59%), Positives = 398/543 (74%), Gaps = 27/543 (4%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 +PAP +EY LAP+LIV A+ G+L EAFLPRR RY AQ L A A ++V+ +AR Sbjct 20 IPAPDIEYAQLAPVLIVVGAAIVGLLLEAFLPRRARYPAQFVLTFFALAAAFVSVVALAR 79 Query 63 SIHGSG--HAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 S +G+ + A +GAIA+D TLFLQGT+LL +I+AV AER + P + Sbjct 80 SGYGTSKVNIAAMGAIAIDGPTLFLQGTILLASILAVFTFAERG--LDPHAEGK------ 131 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 +DSF QA+AVPGSD+E+ A +AG T TE++PLA+ ++ G++VFPA+NDLLT+F+ALE Sbjct 132 -PVDSFVAQAAAVPGSDSEKAAVKAGFTTTEVYPLALFAIAGLLVFPAANDLLTLFIALE 190 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 VLSLPLYL+C LAR +RLLSQEAA+KYFLLGAFSSAF L+GVALLYG G+++ I D Sbjct 191 VLSLPLYLLCALARRKRLLSQEAAVKYFLLGAFSSAFLLFGVALLYGYAGSVSYARIADV 250 Query 241 L--AART----------DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGF 288 + + RT +D + L G AL+ +GLLFKVGAVPFH W PDVYQGAPTPITGF Sbjct 251 VDGSVRTIDPALADTMGNDVLLLIGTALILMGLLFKVGAVPFHMWTPDVYQGAPTPITGF 310 Query 289 MAAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYS 348 MAAATKVAAFGALLR++YV LP L WRPV+W +AI+TM G + A+ QT++KRMLAYS Sbjct 311 MAAATKVAAFGALLRLLYVVLPGLRWDWRPVMWGVAIITMLGGAIVAITQTDIKRMLAYS 370 Query 349 SVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSH 408 S+AH GFIL GV+A N G+S+ LFYL AYSF T+GAFA+V LVR AG E LS Sbjct 371 SIAHAGFILVGVVAVNEDGVSSVLFYLAAYSFVTIGAFAVVTLVR----DAGGEATHLSQ 426 Query 409 WAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVA 468 WAGLG+RSP+V + ++FLLAFAGIPLT+GF KFAVF+AAA GA PLV+VGVI+S +A Sbjct 427 WAGLGRRSPVVAAVFAVFLLAFAGIPLTAGFSGKFAVFKAAAEGGAEPLVVVGVIASAIA 486 Query 469 AYFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQ 528 A+FY+RVIV MFF+E D P VA P ++ AAI VVT++LGIAPQ LDLA QA Sbjct 487 AFFYIRVIVLMFFSEPKPDGPTVAVPSGMTTAAITTGVVVTLILGIAPQYFLDLAGQAGV 546 Query 529 LLR 531 +R Sbjct 547 FVR 549 >gi|54024624|ref|YP_118866.1| NADH dehydrogenase subunit N [Nocardia farcinica IFM 10152] gi|54016132|dbj|BAD57502.1| putative NADH dehydrogenase I chain N [Nocardia farcinica IFM 10152] Length=538 Score = 588 bits (1517), Expect = 6e-166, Method: Compositional matrix adjust. Identities = 338/536 (64%), Positives = 407/536 (76%), Gaps = 16/536 (2%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 +PAP +EY +LAPMLIVF AVAGVL EAF+PRR+RYG Q+ LALGGSA +AV+ Sbjct 12 VPAPSIEYGVLAPMLIVFGAAVAGVLVEAFVPRRFRYGTQLVLALGGSAAGFVAVL---- 67 Query 63 SIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSA-----RVSPQRQNTLAV 117 ++ G+ AV+GA+AVD TLFLQGT+L+V + V+ MAER R P + A Sbjct 68 AVWGAEQTAVVGAVAVDGVTLFLQGTLLVVAALGVLLMAERRGTRSRVRSGPGTWSRAAA 127 Query 118 ARLPGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFV 177 GLD+FTPQA+AVPGS E+ A RAGA TE+FPL ML+VGGMM+ PASNDLL MFV Sbjct 128 TLDRGLDAFTPQAAAVPGSADEQAAARAGAVTTEVFPLTMLAVGGMMLLPASNDLLIMFV 187 Query 178 ALEVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGI 237 ALEVLSLPLYL+CGLAR+RRLLSQEAA+KYFLLGAFSSAFFLYGVALLYG TGT+ L GI Sbjct 188 ALEVLSLPLYLLCGLARHRRLLSQEAALKYFLLGAFSSAFFLYGVALLYGQTGTVRLGGI 247 Query 238 RDALAARTDDS--MALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKV 295 DALAAR D +AL G+A+L VGLLFKVGAVPF +W+PDVYQGAPTP+T FMAAATK+ Sbjct 248 ADALAARPQDDPLLALLGLAMLTVGLLFKVGAVPFQAWVPDVYQGAPTPVTAFMAAATKI 307 Query 296 AAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGF 355 AA GAL+RV+YV +P L D WRPVL +AI TM VG V AV QT+VKRMLAYSS+ H GF Sbjct 308 AAVGALVRVLYVGVPGLVDDWRPVLATVAIATMVVGAVLAVTQTDVKRMLAYSSITHAGF 367 Query 356 ILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQR 415 +LTG++A + AG+ A LFYL AY+ T+GAFA+V LVR D E L+ WAGLG+R Sbjct 368 LLTGLLAADDAGIRAVLFYLAAYALGTLGAFAVVTLVRDGD----EEATGLAQWAGLGRR 423 Query 416 SPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRV 475 SP + ++FLL+FAGIPLTSGFV+KFAVF AAA +V+VGV++S VAA+FYVRV Sbjct 424 SPWAATVFALFLLSFAGIPLTSGFVAKFAVFEAAAGGYGAAVVVVGVLTSAVAAFFYVRV 483 Query 476 IVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 IV MFFTE+ D P V P L++A I V T+VLG+ PQP+LDLA+ AA L+R Sbjct 484 IVMMFFTEQPADAPAV-LPLALTRAVITVTAAATLVLGVLPQPLLDLAEHAATLVR 538 >gi|343926363|ref|ZP_08765868.1| NADH-quinone oxidoreductase chain N [Gordonia alkanivorans NBRC 16433] gi|343763601|dbj|GAA12794.1| NADH-quinone oxidoreductase chain N [Gordonia alkanivorans NBRC 16433] Length=595 Score = 588 bits (1515), Expect = 1e-165, Method: Compositional matrix adjust. Identities = 327/580 (57%), Positives = 407/580 (71%), Gaps = 51/580 (8%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVAL--IAVIVV 60 + AP VEY L+PMLIVFS V GVL EAF PRR RY Q+ L+LGG VAL +A + Sbjct 16 IEAPSVEYAALSPMLIVFSAGVIGVLVEAFAPRRLRYALQLALSLGGLVVALAALATVTT 75 Query 61 ARSIHG-SGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSAR--VSPQRQNTLAV 117 A++ G +G A+ GA+ +DR TL+LQG +L++ I+AV FMAER V+P TLA Sbjct 76 AQTADGANGQFAMSGAVVMDRPTLYLQGLLLIIAIIAVGFMAERRLERVVAPVTMRTLAG 135 Query 118 ARL-------PGL-------DSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGM 163 A + GL D FTP ++VP +DAE +A RAGA TE+FPLA+L+VGGM Sbjct 136 AEVGDDQSGRTGLNGGGVDADMFTPSGASVPNTDAEFEATRAGAVTTEVFPLALLAVGGM 195 Query 164 MVFPASNDLLTMFVALEVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVA 223 M+FPA DLLTMF+ALEV SLPLYL+CGLAR RRL+SQEA++KYFLLGAFSSAFFL+G A Sbjct 196 MLFPACGDLLTMFIALEVFSLPLYLLCGLARRRRLISQEASLKYFLLGAFSSAFFLFGAA 255 Query 224 LLYGATGTLTLPGI----RDALAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQ 279 +YGATG+L L I D D ++AL G+A+LAVGLLFKVGAVPFHSWIPDVYQ Sbjct 256 FVYGATGSLNLSTIGASLTDVAGTGGDTTLALIGLAMLAVGLLFKVGAVPFHSWIPDVYQ 315 Query 280 GAPTPITGFMAAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQT 339 GAPTP+T FMA+ATKVAAFGALLRV YV L DQW P LWA+AI +M + +V AV Q Sbjct 316 GAPTPVTAFMASATKVAAFGALLRVFYVGFGALRDQWEPALWAVAIASMVIASVMAVTQN 375 Query 340 NVKRMLAYSSVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVR------ 393 ++KRMLAYSS+AH GFIL G+IA + AGL ATLFYL AY+F+T+GAF +V ++R Sbjct 376 DIKRMLAYSSIAHAGFILLGLIAFDDAGLGATLFYLAAYAFTTLGAFPMVAVIREPDCDT 435 Query 394 ------------GADGSA---------GSEDADLSHWAGLGQRSPIVGVMLSMFLLAFAG 432 G+A G E DL+ W+GLG+R P+VG M +++LL+FAG Sbjct 436 TTSDTSTSARTAAIHGTAATVRNPHLSGREATDLTQWSGLGRRYPLVGAMFAVYLLSFAG 495 Query 433 IPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMFFTE-ESGDTPHV 491 IPLTSGF++KF VF A A G LV++GVISS +AAY Y+R+IV+MFF + + D PHV Sbjct 496 IPLTSGFIAKFDVFAAVAGNGGGVLVVIGVISSAIAAYVYIRIIVAMFFDDVPTHDAPHV 555 Query 492 AAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 P +L+ IA+CT+ TVVLGI PQP+LDLAD AA LR Sbjct 556 VKPSILTTTGIAICTLATVVLGIFPQPLLDLADAAATFLR 595 >gi|297159521|gb|ADI09233.1| NADH dehydrogenase subunit N [Streptomyces bingchenggensis BCW-1] Length=551 Score = 580 bits (1495), Expect = 2e-163, Method: Compositional matrix adjust. Identities = 319/543 (59%), Positives = 394/543 (73%), Gaps = 27/543 (4%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 +P PH+EY LAP LIV A+ GVL EA LPRR RY AQ+ +++ A A AV+ +A Sbjct 22 IPTPHIEYGQLAPTLIVLGAAIVGVLIEALLPRRHRYAAQLFVSVVALAAAFAAVLGLAA 81 Query 63 SIHGSGHA--AVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 +G+ A A +GAIAVD LFL+GT+LLV ++AV AER R+ P Sbjct 82 GDYGTSKARIAAMGAIAVDGPALFLEGTILLVALVAVFTFAER--RLDPAAHGNR----- 134 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 +DSF QA+AVPG DAE+ A +AG T TE+FPL + +VGGM++FPA+NDLLT+FVALE Sbjct 135 --VDSFAAQAAAVPGGDAEKAAVKAGFTTTEVFPLLLFAVGGMLIFPAANDLLTLFVALE 192 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRD- 239 V SLPLY++C LAR R+LSQEAA+KYFLLGAFSSAF L+G+ALLYG GT+T GI D Sbjct 193 VFSLPLYVLCALARRHRMLSQEAAVKYFLLGAFSSAFLLFGIALLYGYAGTVTYGGIADV 252 Query 240 ----------ALAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGF 288 ALA +D++ L G A++ +GLLFK+GAVPFH W PDVYQGAPTP+TGF Sbjct 253 VDGTVREVTPALAGTMGNDALLLIGGAMVLMGLLFKIGAVPFHMWTPDVYQGAPTPVTGF 312 Query 289 MAAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYS 348 MAAATKVAAFGALLR++YV LP L WRPV+W +AI+TM G + AV QT+VKR+LAYS Sbjct 313 MAAATKVAAFGALLRLLYVVLPGLRWDWRPVMWGVAIVTMLGGAIVAVTQTDVKRLLAYS 372 Query 349 SVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSH 408 S+AH GFIL GVIA P G+S+ LFYL AYSF T+GAF++V LVR AG E LS Sbjct 373 SIAHAGFILAGVIAMTPDGISSVLFYLAAYSFVTLGAFSVVTLVR----DAGGEATHLSK 428 Query 409 WAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVA 468 WAGLG+RSP+V + ++FLLAFAGIPLTSGF KFAVF+AAA GA PLV++GVISS +A Sbjct 429 WAGLGRRSPLVAAVFAIFLLAFAGIPLTSGFAGKFAVFKAAADGGAGPLVVIGVISSAIA 488 Query 469 AYFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQ 528 A+FY+RVIV MFF+E + P VA P L+ AAIA+ VT+VLG+APQ LDLA QA Sbjct 489 AFFYIRVIVLMFFSEPRTEGPSVAVPSPLTSAAIAIGVAVTIVLGVAPQYFLDLAGQAGV 548 Query 529 LLR 531 +R Sbjct 549 FVR 551 >gi|169629233|ref|YP_001702882.1| NADH dehydrogenase subunit N [Mycobacterium abscessus ATCC 19977] gi|288559073|sp|B1MAF7.1|NUON_MYCA9 RecName: Full=NADH-quinone oxidoreductase subunit N; AltName: Full=NADH dehydrogenase I subunit N; AltName: Full=NDH-1 subunit N gi|169241200|emb|CAM62228.1| NADH-quinone oxidoreductase, N subunit NuoN [Mycobacterium abscessus] Length=538 Score = 579 bits (1492), Expect = 5e-163, Method: Compositional matrix adjust. Identities = 313/538 (59%), Positives = 393/538 (74%), Gaps = 15/538 (2%) Query 2 ILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVA 61 ILPAP + Y L+PMLI+F VAV VL EAF+PR R Q+ LA G A +AV+ Sbjct 6 ILPAPAIAYGALSPMLIMFGVAVVSVLVEAFVPRGHRLRTQLALATVGILGAFVAVV--- 62 Query 62 RSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLP 121 ++ GS + GA+A+D TL+LQG +L+ + +A+V MA+R R + + Sbjct 63 -ALSGSHQVVMNGAVAIDGPTLYLQGLILVASGLALVVMAQR--RTVAAVPSAVGAGAGG 119 Query 122 GLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEV 181 GLDSF QAS+VPGS+ ER R G TQTE+FPL + ++ GMM+FPA NDLLTMFVALEV Sbjct 120 GLDSFAAQASSVPGSEPERVLNRTGITQTEIFPLTLFAIAGMMLFPACNDLLTMFVALEV 179 Query 182 LSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDAL 241 SLPLY+MC LAR RRLLSQE+A+KYFLLGAFSSAFFL+G A +YG GT+ L + A+ Sbjct 180 FSLPLYVMCALARRRRLLSQESALKYFLLGAFSSAFFLFGSAFVYGYAGTVELDAVARAV 239 Query 242 AART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 A + S L GVA+L+VGLLFKVGAVPFH W+PDVYQGAPTP+T FMAA TK+AAFGA Sbjct 240 DADAGERSFLLLGVAMLSVGLLFKVGAVPFHFWVPDVYQGAPTPVTAFMAATTKIAAFGA 299 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 LLRV+YVALP + WRPVLW +AI TM +G++ AV QT+VKRMLAYS+VAH GF+LTGV Sbjct 300 LLRVLYVALPGITTDWRPVLWGVAIATMLIGSIGAVTQTDVKRMLAYSAVAHTGFLLTGV 359 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVR------GADGSAGSED--ADLSHWAGL 412 A N G+S+TLFYL AY FST+GAF I GLVR GADG +D DL WAG+ Sbjct 360 AAANERGVSSTLFYLAAYGFSTVGAFIIAGLVRSGNADDGADGDYKDDDEVTDLRRWAGV 419 Query 413 GQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFY 472 G+R+P++G++ ++FLLAFAGIPLTSGFVSKFAVF AAA+ GA+PLV+VGV+ S +AAYFY Sbjct 420 GRRAPVLGIVFALFLLAFAGIPLTSGFVSKFAVFEAAAAGGAMPLVVVGVMCSAIAAYFY 479 Query 473 VRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLL 530 VRVIV MFF + D+ + PG +IAV ++TV+LG+APQP+LDL + A + Sbjct 480 VRVIVVMFFADPVEDSGVLRIPGPAVTVSIAVSALITVLLGVAPQPLLDLVENLADFV 537 >gi|294630809|ref|ZP_06709369.1| NADH-quinone oxidoreductase, N subunit [Streptomyces sp. e14] gi|292834142|gb|EFF92491.1| NADH-quinone oxidoreductase, N subunit [Streptomyces sp. e14] Length=549 Score = 579 bits (1492), Expect = 5e-163, Method: Compositional matrix adjust. Identities = 316/547 (58%), Positives = 395/547 (73%), Gaps = 35/547 (6%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIA--VIVV 60 + AP +EY L+P LIV A+ GVL EAF+PR+ RY AQV + SAVAL A VV Sbjct 20 IEAPKIEYGQLSPTLIVIGAAIVGVLIEAFVPRKSRYYAQVFV----SAVALCAGFAAVV 75 Query 61 ARSIHGSG----HAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLA 116 A + G G H A +GAI+VD +LFLQGT+LL ++ + AER R+ P+ Sbjct 76 ALAADGYGTTKAHIAAMGAISVDGPSLFLQGTILLAGLVGLFTFAER--RLDPEAHGNR- 132 Query 117 VARLPGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMF 176 +DSF QAS+VPGSD E+ A RAG T TE+FPL + +V GM+VFP++NDLLT+F Sbjct 133 ------VDSFAAQASSVPGSDGEKAAVRAGFTTTEVFPLLLFAVAGMLVFPSANDLLTLF 186 Query 177 VALEVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLT--- 233 VALEV SLPLYL+C LAR +RL+SQEAA+KYFLLGAF+SAF L+G+ALLYG G+++ Sbjct 187 VALEVFSLPLYLLCALARRKRLMSQEAAVKYFLLGAFASAFTLFGIALLYGYAGSVSYAA 246 Query 234 --------LPGIRDALAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTP 284 +P + ALA +D++ L G A++ +GLLFKVGAVPFH W PDVYQGAPTP Sbjct 247 IGRVVEGNVPSVDPALADTMGNDALLLVGAAMVVMGLLFKVGAVPFHMWTPDVYQGAPTP 306 Query 285 ITGFMAAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRM 344 +TGFMAAATKVAAFGALLR++YV LP L WRPV+W +AI+TM VG + A+ QT++KR+ Sbjct 307 VTGFMAAATKVAAFGALLRLLYVVLPGLRWDWRPVMWGVAIVTMLVGAIVAITQTDIKRL 366 Query 345 LAYSSVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDA 404 LAYSS+AH GFIL GVIA + G+S+ LFYL AYSF T+GAFA+V LVR AG E Sbjct 367 LAYSSIAHAGFILAGVIATSKDGVSSVLFYLAAYSFVTIGAFAVVTLVR----DAGGEAT 422 Query 405 DLSHWAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVIS 464 LS WAGLG+RSP+V + ++FLLAFAGIPLTSGF KFAVF+AAA GAVPLV++GVIS Sbjct 423 HLSKWAGLGRRSPLVAAVFAVFLLAFAGIPLTSGFAGKFAVFKAAAEGGAVPLVVIGVIS 482 Query 465 SGVAAYFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLAD 524 S +AA+FY+RVIV MFF+E D P VA P L+ AI + VTVVLG+APQ LDLA+ Sbjct 483 SAIAAFFYIRVIVLMFFSEPRPDGPTVAVPSPLTMTAIGIGVAVTVVLGVAPQYFLDLAN 542 Query 525 QAAQLLR 531 QA +R Sbjct 543 QAGVFVR 549 >gi|333922091|ref|YP_004495672.1| NADH-quinone oxidoreductase subunit N [Amycolicicoccus subflavus DQS3-9A1] gi|333484312|gb|AEF42872.1| NADH-quinone oxidoreductase subunit N [Amycolicicoccus subflavus DQS3-9A1] Length=508 Score = 577 bits (1487), Expect = 2e-162, Method: Compositional matrix adjust. Identities = 317/527 (61%), Positives = 404/527 (77%), Gaps = 24/527 (4%) Query 6 PHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVARSIH 65 P + Y L PML+VF VA+ VL EAFLP R RY Q+ L+L G VA +A++++A Sbjct 3 PDIAYSQLTPMLVVFGVAIVSVLVEAFLPARHRYMTQMVLSLTGLVVAFVALLMLA---- 58 Query 66 GSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLPGLDS 125 G+ +G++AVD TLFLQGT++LV +++++ + ER+ R++ A L +D+ Sbjct 59 GTSSVTAVGSVAVDGPTLFLQGTIVLVAVVSLLMVGERT------RES----AAL--MDA 106 Query 126 FTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVLSLP 185 F PQ S+VPGS AER+A +AG QTE+FPLA+ +VGG+M+FPASNDLLTMF+ALEVLSLP Sbjct 107 FAPQTSSVPGSVAEREATKAGVMQTEVFPLALFAVGGLMLFPASNDLLTMFIALEVLSLP 166 Query 186 LYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDALAART 245 LY++CG+AR RRLLSQEAA+KYFLLGAFSSAFFLYGVALLYG GTL GI +A++ + Sbjct 167 LYVLCGMARRRRLLSQEAALKYFLLGAFSSAFFLYGVALLYGFAGTLEFAGIAEAVSEQG 226 Query 246 DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGALLRVV 305 +AL GV +L+VGLLFKVGAVPFH+W PDVYQGAPT ITGFMAAATK+AAFGA+LRV Sbjct 227 SSPLALIGVGMLSVGLLFKVGAVPFHTWTPDVYQGAPTSITGFMAAATKIAAFGAMLRVF 286 Query 306 YVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGVIADNP 365 YVA+P L WRP+LWAIA +TM VGT+ AV QT+VKRMLAYSSVAH GF+LTG++A N Sbjct 287 YVAVPELQVDWRPMLWAIAAITMLVGTIIAVTQTDVKRMLAYSSVAHAGFLLTGIVAAND 346 Query 366 AGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVGVMLSM 425 AG+SATLFYLVAY FST+GAFA+V LVR G E AD++ WAGLG++SP++ ++ Sbjct 347 AGVSATLFYLVAYGFSTLGAFAVVSLVR---DRGGIETADMNAWAGLGRQSPLIAGAFAL 403 Query 426 FLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMFFTE-- 483 FLLA AG+PLTSGF+SKF +F AA GA LVI+GV+SS +AAYFY+RVIV MFF+E Sbjct 404 FLLALAGVPLTSGFISKFVIFSAAVEGGAAVLVIIGVLSSAIAAYFYIRVIVLMFFSEPV 463 Query 484 ESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLL 530 E G + AP ++ A +A+ VVTVVLG+ PQ VLDLA++A+ + Sbjct 464 EEG---AIVAPKTMTSAVVAIGVVVTVVLGVMPQSVLDLAERASSFV 507 >gi|262200408|ref|YP_003271616.1| proton-translocating NADH-quinone oxidoreductase, chain N [Gordonia bronchialis DSM 43247] gi|262083755|gb|ACY19723.1| proton-translocating NADH-quinone oxidoreductase, chain N [Gordonia bronchialis DSM 43247] Length=572 Score = 576 bits (1485), Expect = 3e-162, Method: Compositional matrix adjust. Identities = 333/561 (60%), Positives = 397/561 (71%), Gaps = 35/561 (6%) Query 6 PHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVV--ARS 63 P VEY L+PMLIVF V V GVL EAF R+ RY AQV L+LGG A A++ V + S Sbjct 12 PSVEYAALSPMLIVFGVGVVGVLVEAFASRKVRYPAQVVLSLGGLVAAFAALVAVADSES 71 Query 64 IHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERS-ARVSPQRQNTLAVARLPG 122 G G A+ GA+ VDR LFLQG +LLV + V FMAER RV T+ Sbjct 72 SGGDGQFAMSGAVVVDRPALFLQGLLLLVAVAGVAFMAERRLERVVAPALQTVGTGAGTD 131 Query 123 LDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVL 182 D FTP ++VP ++AE +A RAGA TE+FPL ML+VGGMM+FPA DLLTMF+ALEV Sbjct 132 ADMFTPSGASVPNTEAEFEATRAGAVTTEVFPLTMLTVGGMMLFPACGDLLTMFIALEVF 191 Query 183 SLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDALA 242 SLPLYL+CGLAR RRL+SQEA++KYFLLGAFSSAFFL+G AL YGA+G+L L I +++ Sbjct 192 SLPLYLLCGLARRRRLISQEASLKYFLLGAFSSAFFLFGAALAYGASGSLNLSRIGESVT 251 Query 243 ART----DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAF 298 A T D++ AL G+ +LAVGLLFKVGAVPFH+WIPDVYQGAPTP+T FMAAATK+AAF Sbjct 252 ATTASGGDNTFALIGLGMLAVGLLFKVGAVPFHAWIPDVYQGAPTPVTAFMAAATKIAAF 311 Query 299 GALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILT 358 GALLRV YVA P LHDQW+P LWA+AI TM VG V AV QT+VKRMLAYSS+ H GFIL Sbjct 312 GALLRVFYVAFPALHDQWKPALWAVAIATMLVGAVMAVTQTDVKRMLAYSSITHAGFILL 371 Query 359 GVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSA------------------- 399 GVIA + AGL+ATLFYL AY FST+GAFA + +VR D +A Sbjct 372 GVIAFDDAGLAATLFYLAAYGFSTLGAFATIAVVREPDNTAADNPTSLRSQISHGQQARL 431 Query 400 ---------GSEDADLSHWAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAA 450 G E +LS WAGLG+R P+VG M SMFLLAFAGIPLTSGF++KF VF A A Sbjct 432 PVSRSPHLSGREATNLSQWAGLGRRYPLVGAMFSMFLLAFAGIPLTSGFIAKFDVFAAVA 491 Query 451 SAGAVPLVIVGVISSGVAAYFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTV 510 G LV++GVISS +AAYFYVR+IV+MFF + D PHV P + + IAVCTVVT+ Sbjct 492 GTGGGVLVVIGVISSAIAAYFYVRIIVAMFFHDVPVDAPHVVKPSIFTTTGIAVCTVVTI 551 Query 511 VLGIAPQPVLDLADQAAQLLR 531 LG+ PQP+LDL + AA LR Sbjct 552 ALGVFPQPLLDLTEHAATFLR 572 >gi|21222958|ref|NP_628737.1| NADH dehydrogenase subunit N [Streptomyces coelicolor A3(2)] gi|289769821|ref|ZP_06529199.1| NuoN [Streptomyces lividans TK24] gi|5042264|emb|CAB44518.1| NuoN, NADH dehydrogenase subunit [Streptomyces coelicolor A3(2)] gi|289700020|gb|EFD67449.1| NuoN [Streptomyces lividans TK24] Length=552 Score = 571 bits (1471), Expect = 1e-160, Method: Compositional matrix adjust. Identities = 308/543 (57%), Positives = 394/543 (73%), Gaps = 27/543 (4%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 + AP +EY L+P+LIV A+ G+L EAF+PRR RY AQ+ ++ A A++ +A Sbjct 23 IDAPKIEYGQLSPVLIVLGAAIIGILVEAFVPRRSRYYAQMFVSAVALVAAFAAIVALAA 82 Query 63 SIHGSGHA--AVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 +G+ A A +GA+AVD LFLQGT+LL +++ + AER R+ P++ Sbjct 83 GGYGTTKAGIAAMGAVAVDGPALFLQGTILLTSLVGLFTFAER--RLDPEQHGNR----- 135 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 +DSF QA+AVPGS++E++A +AG T TE+FPL + +V GM+VFPA+NDLLT+FVALE Sbjct 136 --VDSFAAQAAAVPGSESEQKAVKAGFTTTEVFPLLLFAVAGMLVFPAANDLLTLFVALE 193 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTL-------- 232 V SLPLYL+C LAR +RL+SQEAA+KYFLLGAF+SAF L+G+ALLYG G++ Sbjct 194 VFSLPLYLLCALARRKRLMSQEAAVKYFLLGAFASAFTLFGIALLYGYAGSMSYGTIAQV 253 Query 233 ---TLPGIRDALAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGF 288 T+ + ALA +D++ L G AL+ +GLLFKVGAVPFH W PDVYQGAPTP+TGF Sbjct 254 VDGTVQNVTPALADTMGNDALLLVGSALIVMGLLFKVGAVPFHMWTPDVYQGAPTPVTGF 313 Query 289 MAAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYS 348 MAAATKVAAFGALLR++YV LP L WRPV+W +AI+TM G + A+ QT++KR+LAYS Sbjct 314 MAAATKVAAFGALLRILYVVLPGLRWDWRPVMWGVAIVTMLAGAIVAITQTDIKRLLAYS 373 Query 349 SVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSH 408 S+AH GFIL GVIA P G+S+ LFYL AYSF T+GAFA+V LVR AG E LS Sbjct 374 SIAHAGFILAGVIATTPEGISSVLFYLAAYSFVTIGAFAVVTLVR----DAGGEATHLSK 429 Query 409 WAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVA 468 WAGLG+RSP+V + ++FLLAFAGIPLTSGF KFAVF+AAA GA PLV++GVISS +A Sbjct 430 WAGLGRRSPLVAAVFAVFLLAFAGIPLTSGFSGKFAVFKAAAEGGAAPLVVIGVISSAIA 489 Query 469 AYFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQ 528 A+FY+RVIV MFF+E + P VA P L+ AIAV VTVVLG+APQ LDLA QA Sbjct 490 AFFYIRVIVLMFFSEPRPEGPTVAVPSPLTMTAIAVGVAVTVVLGVAPQYFLDLAGQAGV 549 Query 529 LLR 531 +R Sbjct 550 FVR 552 >gi|345008481|ref|YP_004810835.1| NAD(P)H-quinone oxidoreductase subunit 2 [Streptomyces violaceusniger Tu 4113] gi|344034830|gb|AEM80555.1| NAD(P)H-quinone oxidoreductase subunit 2 [Streptomyces violaceusniger Tu 4113] Length=550 Score = 570 bits (1468), Expect = 3e-160, Method: Compositional matrix adjust. Identities = 317/543 (59%), Positives = 391/543 (73%), Gaps = 27/543 (4%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 +P+P +EY L+P LIV A+ GVL EA LPRR RY AQV +++ A A AVI +A Sbjct 21 IPSPDIEYGQLSPTLIVLGAAIVGVLIEALLPRRQRYVAQVFVSVVALAAAFAAVIGLAA 80 Query 63 SIHGSG--HAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 +G+ H A +GAIAVD LFLQGT+LLV ++AV AER R+ P Sbjct 81 GHYGTSKAHVAAMGAIAVDGPALFLQGTILLVALVAVFTFAER--RLDPLVHGNR----- 133 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 +DSF QA+AVPG DAE+ A +AG T TE+FPL + +VGGM+VFP++NDLLT+FVALE Sbjct 134 --VDSFAAQAAAVPGGDAEKAAVKAGFTTTEVFPLVLFAVGGMLVFPSANDLLTLFVALE 191 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 V SLPLY++C LAR R LSQEAA+KYFLLGAFSSAF L+G+ALLYG GT+T GI D Sbjct 192 VFSLPLYVLCALARRHRALSQEAAVKYFLLGAFSSAFLLFGIALLYGYAGTVTYSGIADV 251 Query 241 LAART------------DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGF 288 + + +D++ L G A++ +GLLFK+GAVPFH W PDVYQGAPTP+TGF Sbjct 252 VDGQVRNVTPALAGTMGNDALLLIGGAMVLMGLLFKIGAVPFHMWTPDVYQGAPTPVTGF 311 Query 289 MAAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYS 348 MAAATKVAAFGALLR++YV LP L WRPV+W +AI+TM G + AV QT+VKR+LAYS Sbjct 312 MAAATKVAAFGALLRLLYVVLPGLRWDWRPVMWGVAIVTMLGGAIVAVTQTDVKRLLAYS 371 Query 349 SVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSH 408 S+AH GFIL GVIA P G+S+ LFYL AYSF T+GAFA+V LVR AG E LS Sbjct 372 SIAHAGFILAGVIATTPEGVSSVLFYLAAYSFVTLGAFAVVTLVR----DAGGEATHLSK 427 Query 409 WAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVA 468 WAGLG+RSP+V + ++FLLAFAGIPLTSGF KFAVF+AAA GA LV++GVISS +A Sbjct 428 WAGLGRRSPLVAAVFAVFLLAFAGIPLTSGFAGKFAVFKAAADGGAGALVVIGVISSAIA 487 Query 469 AYFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQ 528 A+FY+RVIV MFF+E D P VA P L+ +AIA+ VT+VLG+APQ LDLA QA Sbjct 488 AFFYIRVIVLMFFSEPRTDGPSVAVPSPLTSSAIAIGVAVTLVLGVAPQYFLDLASQAGV 547 Query 529 LLR 531 +R Sbjct 548 FVR 550 >gi|302543431|ref|ZP_07295773.1| NADH dehydrogenase I, N subunit [Streptomyces hygroscopicus ATCC 53653] gi|302461049|gb|EFL24142.1| NADH dehydrogenase I, N subunit [Streptomyces himastatinicus ATCC 53653] Length=550 Score = 569 bits (1466), Expect = 5e-160, Method: Compositional matrix adjust. Identities = 318/543 (59%), Positives = 393/543 (73%), Gaps = 27/543 (4%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 +PAPH+EY LAP LIV A+ GVL EAFLPR RY AQ+ +++ A A AVI +A Sbjct 21 IPAPHIEYGQLAPTLIVLGAAIIGVLVEAFLPRAQRYAAQLFVSVVSLAAAFAAVIGLAA 80 Query 63 SIHGSG--HAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 S +G+G H A +GAIAVD LFLQGT+LLV +++V AER R+ P Sbjct 81 SDYGTGKAHVAAMGAIAVDGPALFLQGTILLVALVSVFTFAER--RLDPVVHGNR----- 133 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 +D+F QA+AVPG + E+ A +AG T TE+FPL + +VGGM+VFPA+NDLLT+FVALE Sbjct 134 --VDNFAAQAAAVPGGEGEKAAVKAGFTTTEVFPLVLFAVGGMLVFPAANDLLTLFVALE 191 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDA 240 V SLPLY++C LAR R+LSQE+A+KYFLLGAFSSAF L+G+ALLYG GT+ GI D Sbjct 192 VFSLPLYVLCALARRHRMLSQESAVKYFLLGAFSSAFLLFGIALLYGYAGTVAYAGIADV 251 Query 241 LAART------------DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGF 288 + + +D++ L G AL+ +GLLFK+GAVPFH W PDVYQGAPTP+TGF Sbjct 252 VDGQVRNVTPALAGTMGNDALLLLGGALVLMGLLFKIGAVPFHMWTPDVYQGAPTPVTGF 311 Query 289 MAAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYS 348 MAAATKVAAFGALLR++YV LP L WRPV+W +AI+TM G + AV QT+VKR+LAYS Sbjct 312 MAAATKVAAFGALLRLLYVVLPGLRWDWRPVMWGVAIVTMLGGAIVAVTQTDVKRLLAYS 371 Query 349 SVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSH 408 S+AH GFIL GVIA P G+S+ LFYL AYSF T+GAFA+V LVR AG E LS Sbjct 372 SIAHAGFILAGVIATTPEGISSVLFYLAAYSFVTLGAFAVVTLVR----DAGGEATHLSK 427 Query 409 WAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVA 468 WAGLG+RSP+V + ++FLLAFAGIPLTSGF KFAVF+AAA GA LV++GVISS +A Sbjct 428 WAGLGRRSPLVAAVFAVFLLAFAGIPLTSGFAGKFAVFKAAADGGAGALVVIGVISSAIA 487 Query 469 AYFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQ 528 A+FY+RVIV MFF+E D P VA P L+ +AIA+ VTVVLG+APQ LDLA QA Sbjct 488 AFFYIRVIVLMFFSEPRTDGPSVAVPSPLTSSAIAIGVAVTVVLGVAPQYFLDLAGQAGV 547 Query 529 LLR 531 +R Sbjct 548 FVR 550 >gi|329935984|ref|ZP_08285784.1| NADH dehydrogenase subunit NuoN [Streptomyces griseoaurantiacus M045] gi|329304462|gb|EGG48340.1| NADH dehydrogenase subunit NuoN [Streptomyces griseoaurantiacus M045] Length=552 Score = 566 bits (1458), Expect = 4e-159, Method: Compositional matrix adjust. Identities = 310/543 (58%), Positives = 390/543 (72%), Gaps = 27/543 (4%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 + AP +EY L+P LIV A+ GVL EAF+PR+ RY AQV ++ A AVI +A Sbjct 23 IDAPKIEYGQLSPTLIVLGAALVGVLVEAFVPRKNRYYAQVFVSAVALCAAFAAVIALAA 82 Query 63 SIHGS--GHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 +G+ H A +GAI+VD LFLQGT+LLV ++ V AER R+ P Sbjct 83 GGYGTTKAHVAAMGAISVDGPALFLQGTILLVGLLGVFTFAER--RLDPAAHGNR----- 135 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 +DSF QA++VPGSD+ER A +AG T TE FPL + ++GGM+VFP++NDLLT+FVALE Sbjct 136 --VDSFAAQAASVPGSDSERAAVKAGFTTTEAFPLLLFAIGGMLVFPSANDLLTLFVALE 193 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTL-------- 232 V SLPLYL+C LAR +RL+SQEAA+KYFLLGAF+SAF L+G+ALLYG G++ Sbjct 194 VFSLPLYLLCALARRKRLMSQEAAVKYFLLGAFASAFTLFGIALLYGYAGSVSYARIAQV 253 Query 233 ---TLPGIRDALAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGF 288 T+ + ALA +D++ L G A++ +GLLFKVGAVPFH W PDVYQGAPTP+TGF Sbjct 254 VDGTVTDVDPALAGTMGNDALLLVGAAMIVMGLLFKVGAVPFHMWTPDVYQGAPTPVTGF 313 Query 289 MAAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYS 348 MA+ATKVAAFGALLR++YV LP L WRPV+WA+AI+TM G + A+ QT++KR+LAYS Sbjct 314 MASATKVAAFGALLRLLYVVLPGLRWDWRPVMWAVAIVTMLGGAIVAITQTDIKRLLAYS 373 Query 349 SVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSH 408 S+AH GFIL GVIA P+G+S+ LFYL AYSF T+GAFA+V LVR AG E LS Sbjct 374 SIAHAGFILAGVIATTPSGISSVLFYLAAYSFVTIGAFAVVTLVR----DAGGEATHLSK 429 Query 409 WAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVA 468 WAGLG+RSP+V + ++FLLAFAGIPLTSGF KFAVF+AAA GA+PLV+VGVISS +A Sbjct 430 WAGLGRRSPLVAAVFAVFLLAFAGIPLTSGFAGKFAVFKAAAEGGAMPLVVVGVISSAIA 489 Query 469 AYFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQ 528 A+FY+RVIV MFF+ + P VA L+ AIA VTVVLG+APQ LDLA QA Sbjct 490 AFFYIRVIVLMFFSRPHPEGPTVAVASPLTTVAIAAGVAVTVVLGVAPQYFLDLASQAGV 549 Query 529 LLR 531 +R Sbjct 550 FVR 552 >gi|328884325|emb|CCA57564.1| NADH-ubiquinone oxidoreductase chain N [Streptomyces venezuelae ATCC 10712] Length=553 Score = 565 bits (1457), Expect = 6e-159, Method: Compositional matrix adjust. Identities = 308/546 (57%), Positives = 393/546 (72%), Gaps = 33/546 (6%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 +PAPH+EY L+P+LIV A+ VL EAF+PR+ RY +QV L++ A A A++ +A Sbjct 24 IPAPHIEYTQLSPVLIVVGAAIVSVLVEAFVPRKARYHSQVFLSVVALAAAFAAIVGLAA 83 Query 63 SIHGS--GHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 +GS H A +GAIAVD LFLQGT+LL +I+A+ AER R+ P Sbjct 84 GGYGSTKAHIAAMGAIAVDGPALFLQGTILLASIVAIFTFAER--RLDPADHGH------ 135 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 +DSF +A+AVPGSD E+ A +AG T TE+FPLA+ ++ GM+VFPA+NDLLT+FVALE Sbjct 136 -KVDSFAAEAAAVPGSDHEKAAIKAGFTTTEVFPLALFAIAGMLVFPAANDLLTLFVALE 194 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTL------ 234 V SLPLYL+C +AR +RL+SQEAA+KYFLLGAFSSAF L+G+ALLYG G+++ Sbjct 195 VFSLPLYLLCAVARRKRLMSQEAAVKYFLLGAFSSAFLLFGIALLYGYAGSVSYATIAQV 254 Query 235 ---------PGIRDALAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPI 285 P + D + +D++ L G A++ +GLLFKVGAVPFH W PDVYQGAPTP+ Sbjct 255 VDGAVGSVNPALADTMG---NDALLLIGFAMVLMGLLFKVGAVPFHMWTPDVYQGAPTPV 311 Query 286 TGFMAAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRML 345 TGFMAAATKVAAFGALLR++YV LP L WRPV+W +AI+TM G + A+ QT++KR+L Sbjct 312 TGFMAAATKVAAFGALLRLLYVVLPGLTWDWRPVMWGVAIVTMLGGAIVAITQTDIKRLL 371 Query 346 AYSSVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDAD 405 AYSS+AH GF+L GVIA P+G+S+ LFYL AYSF T+GAFA+V LVR AG E Sbjct 372 AYSSIAHAGFLLAGVIAATPSGISSVLFYLGAYSFVTIGAFAVVTLVR----DAGGEATH 427 Query 406 LSHWAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISS 465 LS WAGLG+RSP+V + ++FLLAFAGIPLTSGF KFAVF+AAA GA LV+VGVISS Sbjct 428 LSKWAGLGRRSPLVAAVFAVFLLAFAGIPLTSGFSGKFAVFKAAADGGAGALVVVGVISS 487 Query 466 GVAAYFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQ 525 +AA+FY+RVIV MFF+E D P VA P L+ I VT+VLG+APQ LDLA+Q Sbjct 488 AIAAFFYIRVIVLMFFSEPKADGPTVAVPSALTTVTITAGVAVTLVLGLAPQYFLDLANQ 547 Query 526 AAQLLR 531 A+ +R Sbjct 548 ASVFVR 553 >gi|320009191|gb|ADW04041.1| proton-translocating NADH-quinone oxidoreductase, chain N [Streptomyces flavogriseus ATCC 33331] Length=554 Score = 563 bits (1452), Expect = 2e-158, Method: Compositional matrix adjust. Identities = 313/541 (58%), Positives = 389/541 (72%), Gaps = 27/541 (4%) Query 5 APHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVARSI 64 AP +EY LAP+LIV AV G+L EAF+PRR RY QV L + A A AVI +A Sbjct 27 APTIEYAQLAPVLIVVGAAVLGILVEAFVPRRARYTTQVFLTVVAIAAAFAAVIGLAADG 86 Query 65 HGS--GHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLPG 122 + + H A +GA+AVD LFLQGT+LLV++++V AER R+ P T Sbjct 87 YATKNAHIAAMGAVAVDGPALFLQGTILLVSVVSVFTFAER--RLDPASHGTR------- 137 Query 123 LDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVL 182 +DSF QA +VPGSD E+ A +AG T TE+FPLA+ SV GM+VFPA+NDLLT+F+ALEV Sbjct 138 VDSFAAQAGSVPGSDGEKAAVKAGFTTTEVFPLALFSVAGMLVFPAANDLLTLFIALEVF 197 Query 183 SLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRD--- 239 SLPLYL+C +AR +RL+SQEAA+KYFLLGAFSSAF L+G+ALLYG GT++ GI + Sbjct 198 SLPLYLLCAVARRKRLMSQEAAVKYFLLGAFSSAFLLFGIALLYGYAGTVSYAGIANVVD 257 Query 240 --------ALAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMA 290 ALA+ +D++ L G A++ +GLLFKVGAVPFH W PDVYQGAPTP+TGFMA Sbjct 258 GSVQQIDPALASTMGNDALLLIGGAMILMGLLFKVGAVPFHMWTPDVYQGAPTPVTGFMA 317 Query 291 AATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSV 350 AATKVAAFGALLR++YV LP L RPV+W +AI+TM G + A+ QT++KR+LAYSS+ Sbjct 318 AATKVAAFGALLRLLYVVLPGLTWDLRPVMWGVAIVTMLGGAIVAITQTDIKRLLAYSSI 377 Query 351 AHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWA 410 AH GFIL GVIA +P G+S+ LFYL YSF T+GAFA+V LVR AG E LS WA Sbjct 378 AHAGFILAGVIAASPEGISSVLFYLGVYSFVTVGAFAVVTLVR----DAGGEATHLSKWA 433 Query 411 GLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAY 470 GLG+RSP+ + ++FLL+FAGIPLTSGF KFAVF+AAA GA LV+VGVISS +AA+ Sbjct 434 GLGRRSPLTAAVFAVFLLSFAGIPLTSGFSGKFAVFKAAADGGASGLVVVGVISSAIAAF 493 Query 471 FYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLL 530 FY+RVIV MFF+E D P VA P L+ IAV VT+VLG+APQ LDLA QA + Sbjct 494 FYIRVIVLMFFSEPKADGPTVAVPSPLTMTTIAVGVAVTLVLGLAPQYFLDLAGQAGVFV 553 Query 531 R 531 R Sbjct 554 R 554 >gi|337767482|emb|CCB76193.1| NADH-quinone oxidoreductase subunit N [Streptomyces cattleya NRRL 8057] Length=550 Score = 563 bits (1451), Expect = 3e-158, Method: Compositional matrix adjust. Identities = 321/542 (60%), Positives = 396/542 (74%), Gaps = 26/542 (4%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 LP P +EY LAP+LIVF+ AV GVL EAF+PRR R AQ+ + + G A A V+ +A Sbjct 22 LPTPRIEYAQLAPVLIVFAAAVIGVLVEAFVPRRARPLAQLAVTVVGLAAAFAGVVALAA 81 Query 63 SIH--GSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 + G H A +GAIAVD LFLQGT+LLV ++A AER R+ P Sbjct 82 DGYAGGKAHVAAMGAIAVDGPALFLQGTILLVALVAAFTFAER--RLDPAAHGV------ 133 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 +DSF Q SAVPGS+ E++A RAG T TE+FPL + +VGGM+VFPA++DLLT+FVALE Sbjct 134 -AVDSFAAQGSAVPGSEQEKRAVRAGFTTTEVFPLLLFAVGGMLVFPAADDLLTLFVALE 192 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRD- 239 V SLPLYL+C LAR RRL+SQEAA+KYFLLGAFSSA L+G+ALLYG GT++ GI D Sbjct 193 VFSLPLYLLCALARRRRLMSQEAAVKYFLLGAFSSAILLFGIALLYGYAGTVSFGGIADV 252 Query 240 ---------ALAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFM 289 ALA T +D++ L G A++ VGLLFKVGAVPFH W PDVYQGAPTP+TGFM Sbjct 253 VSGTARLTPALANTTANDALLLIGGAMVVVGLLFKVGAVPFHMWTPDVYQGAPTPVTGFM 312 Query 290 AAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSS 349 AAATKVAAFGALLR++YV LP L WRPV+W +AI+TM VG V AV QT+VKR+LAYSS Sbjct 313 AAATKVAAFGALLRLLYVVLPGLRWDWRPVMWGVAIVTMLVGAVVAVTQTDVKRLLAYSS 372 Query 350 VAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHW 409 +AH GFIL GVIA +P G+S+ +FYL AYSF T+GAFA+V LVR A G E LS W Sbjct 373 IAHAGFILAGVIAVSPDGVSSVMFYLGAYSFVTLGAFAVVTLVRDAAG----EATHLSRW 428 Query 410 AGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAA 469 AGLG+RSP+V + ++FLLAFAGIPLT+GF KFAVF+AAA GAVPLV+VGV++S +AA Sbjct 429 AGLGRRSPLVAAVFAVFLLAFAGIPLTAGFSGKFAVFKAAAQGGAVPLVVVGVVASAIAA 488 Query 470 YFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQL 529 +FY+RVIV MFF+E P VA P L+ AIA+ +T+VLG+APQ LDLA +A+ Sbjct 489 FFYIRVIVLMFFSEPRPGGPSVAVPSPLTSTAIALGVAMTLVLGVAPQYFLDLAGKASVF 548 Query 530 LR 531 +R Sbjct 549 VR 550 >gi|290958247|ref|YP_003489429.1| NADH dehydrogenase subunit NuoN [Streptomyces scabiei 87.22] gi|260647773|emb|CBG70878.1| NuoN, NADH dehydrogenase subunit [Streptomyces scabiei 87.22] Length=549 Score = 561 bits (1446), Expect = 1e-157, Method: Compositional matrix adjust. Identities = 308/543 (57%), Positives = 394/543 (73%), Gaps = 27/543 (4%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 + AP +EY L+P LIV + A+ GVL EAF+PR+ RY AQV L++ + AV+ +A Sbjct 20 IDAPKIEYGQLSPTLIVIAAAILGVLIEAFVPRKSRYYAQVFLSVVALGASFAAVVALAA 79 Query 63 SIHGSGHA--AVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 +G+ A A +GA+AVD LFLQGT+LL I+ V AER R+ P+ Sbjct 80 RGYGTTKAGIAAMGAVAVDGPALFLQGTILLAGILGVFTFAER--RLDPETHGN------ 131 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 +DSF QA++VPGSD+E+ A +AG T TE+FPL + ++GGM++FPA+NDLLT+F+ALE Sbjct 132 -KVDSFAAQAASVPGSDSEKAAVKAGFTTTEVFPLLLFAIGGMLIFPAANDLLTLFIALE 190 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTL-------- 232 V SLPLYL+C +AR +RL+SQEAA+KYFLLGAF+SAF L+G+ALLYG G++ Sbjct 191 VFSLPLYLLCAVARRKRLMSQEAAVKYFLLGAFASAFTLFGIALLYGYAGSVNYATIAQV 250 Query 233 ---TLPGIRDALAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGF 288 T+ I ALA +D++ L G A++ +GLLFKVGAVPFH W PDVYQGAPTP+TGF Sbjct 251 VDGTIGDINPALADTMGNDALLLIGSAMIVMGLLFKVGAVPFHMWTPDVYQGAPTPVTGF 310 Query 289 MAAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYS 348 MAAATKVAAFGALLR++YV LP L WRPV+WA+A++TM G + A+ QT++KR+LAYS Sbjct 311 MAAATKVAAFGALLRLLYVVLPGLRWDWRPVMWAVAVVTMLGGAIVAITQTDIKRLLAYS 370 Query 349 SVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSH 408 S+AH GFIL GVIA +P G+S+ LFYL AYSF T+GAFA+V LVR AG E LS Sbjct 371 SIAHAGFILAGVIAASPDGVSSVLFYLGAYSFVTIGAFAVVTLVR----DAGGEATHLSK 426 Query 409 WAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVA 468 WAGLG+RSP+V + ++FLLAFAGIPLTSGF KFAVF+AAA GA +V+VGVISS +A Sbjct 427 WAGLGRRSPLVAAVFAVFLLAFAGIPLTSGFAGKFAVFKAAAEGGAGAIVVVGVISSAIA 486 Query 469 AYFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQ 528 A+FY+RVIV MFF+E + P VA P L+ AIAV VT+VLGIAPQ LDLA QA Sbjct 487 AFFYIRVIVLMFFSEPRPEGPTVAVPSPLTMTAIAVGVAVTLVLGIAPQYFLDLAGQAGV 546 Query 529 LLR 531 +R Sbjct 547 FVR 549 >gi|311897903|dbj|BAJ30311.1| putative NADH-quinone oxidoreductase subunit N [Kitasatospora setae KM-6054] Length=545 Score = 559 bits (1441), Expect = 4e-157, Method: Compositional matrix adjust. Identities = 319/542 (59%), Positives = 395/542 (73%), Gaps = 26/542 (4%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 +PAPHVEY L+PML+VF A+ GVL EAFLPRR R AQ+ ++L G A AV+V+A Sbjct 17 IPAPHVEYGQLSPMLVVFGAALVGVLVEAFLPRRARASAQLGVSLLGLGGAFTAVVVLAA 76 Query 63 SIHGSGHAAVL--GAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARL 120 H + + +L GA+A+D LFLQG +LL ++AV+ AE R+ P R N V Sbjct 77 QGHATTESGLLAMGAVAIDGPALFLQGVILLTAVLAVLTYAE--GRLEP-RINGHRV--- 130 Query 121 PGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALE 180 D+F QA+AVPG + ERQA R G TE++PL + +VGGM++FPA+NDLLTMFVALE Sbjct 131 ---DAFAAQAAAVPGGEQERQATREGLRTTEIYPLTLFAVGGMLLFPAANDLLTMFVALE 187 Query 181 VLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRD- 239 VLSLPLYLMC +AR RRLLSQEAA+KYFLLGAF+SAFFL+G AL+YG G++ L I D Sbjct 188 VLSLPLYLMCAIARRRRLLSQEAAVKYFLLGAFASAFFLFGTALVYGYAGSVQLGEIADV 247 Query 240 ---------ALAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFM 289 ALA T +D++ L G+A+LAVGLLFKVGAVPFH+W PDVYQGAPTP+TGFM Sbjct 248 VSGVAPVTPALAVTTQNDALLLIGLAMLAVGLLFKVGAVPFHTWTPDVYQGAPTPVTGFM 307 Query 290 AAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSS 349 AAATK AAFGA LR+ YVA P L WRPV+W +AILTM VG + AV Q +VKR+LAYSS Sbjct 308 AAATKTAAFGAFLRLFYVAFPGLRWDWRPVMWGVAILTMVVGAILAVTQQDVKRLLAYSS 367 Query 350 VAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHW 409 VAH GFILTG+IA + G++A LFYL++YSF T+GAFA+V LVR + G E LS+W Sbjct 368 VAHAGFILTGLIATDRRGVAAVLFYLLSYSFVTLGAFAVVTLVRDSKG----EATHLSNW 423 Query 410 AGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAA 469 AGLG+RSP++ + ++FLLAFAGIPLTSGF KFAVF AAA GA PLVIVGV+SS VAA Sbjct 424 AGLGRRSPLLAAVFALFLLAFAGIPLTSGFTGKFAVFEAAAQGGATPLVIVGVLSSAVAA 483 Query 470 YFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQL 529 +FY+RVIV MFF++ P VA P L+ AI V +VT+ LG+ PQ LDLA +A+ Sbjct 484 FFYIRVIVLMFFSDPQPSGPAVAVPSPLTATAIGVGVLVTLGLGLLPQYFLDLASKASLF 543 Query 530 LR 531 R Sbjct 544 AR 545 >gi|345001420|ref|YP_004804274.1| proton-translocating NADH-quinone oxidoreductase subunit N [Streptomyces sp. SirexAA-E] gi|344317046|gb|AEN11734.1| proton-translocating NADH-quinone oxidoreductase, chain N [Streptomyces sp. SirexAA-E] Length=567 Score = 559 bits (1440), Expect = 5e-157, Method: Compositional matrix adjust. Identities = 317/548 (58%), Positives = 390/548 (72%), Gaps = 28/548 (5%) Query 5 APHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVARSI 64 AP +EY LAP+LIV VAV GVL EAF+PRR RY QV L + A + AVI +A Sbjct 27 APTIEYAQLAPVLIVVGVAVLGVLVEAFVPRRARYTTQVFLTVVALAASFAAVIGLAADG 86 Query 65 HG--SGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSAR-------VSPQRQNTL 115 + S H A +GAIAVD LFLQGT+LLV++++V AER VSP + Sbjct 87 YATKSAHIAAMGAIAVDGPALFLQGTILLVSMVSVFTFAERRLEPAPHGDGVSPAGTKSR 146 Query 116 AVARLPGLDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTM 175 A R+ DSF QA +VPGSD+E+ A +AG T TE+FPL + SV GM+VFPA+NDLLT+ Sbjct 147 AWGRV---DSFAAQAGSVPGSDSEKAAVKAGFTTTEVFPLLLFSVAGMLVFPAANDLLTL 203 Query 176 FVALEVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLP 235 F+ALEV SLPLYL+C +AR +RL+SQEAA+KYFLLG+FSSAF L+G+ALLYG GT++ Sbjct 204 FIALEVFSLPLYLLCAVARRKRLMSQEAAVKYFLLGSFSSAFLLFGIALLYGYAGTVSYA 263 Query 236 GI--------RDALAARTD----DSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPT 283 GI +D A D D++ L G A++ +GL FKVGAVPFH W PDVYQGAPT Sbjct 264 GIAGVVDGDIQDIDPALADTMGNDALLLIGGAMILMGLFFKVGAVPFHMWTPDVYQGAPT 323 Query 284 PITGFMAAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKR 343 P+TGFMAAATKVAAFGALLR++YV LP L RPV+W +AI+TM G V A+ QT++KR Sbjct 324 PVTGFMAAATKVAAFGALLRLLYVVLPGLTWDLRPVMWGVAIVTMVGGAVVAITQTDIKR 383 Query 344 MLAYSSVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSED 403 +LAYSS+AH GFIL GVIA +P G+S+ LFYL YSF T+GAFA+V LVR AG E Sbjct 384 LLAYSSIAHAGFILAGVIAASPDGISSVLFYLGVYSFVTVGAFAVVTLVR----DAGGEA 439 Query 404 ADLSHWAGLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVI 463 LS WAGLG+RSP+ + ++FLL+FAGIPLTSGF KFAVF+AAA GA PLV+VGVI Sbjct 440 THLSKWAGLGRRSPLTAAVFAVFLLSFAGIPLTSGFSGKFAVFKAAADGGAAPLVVVGVI 499 Query 464 SSGVAAYFYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLA 523 SS +AA+FY+RVIV MFF+E D P VA P L+ IAV VT+VLG+APQ LDLA Sbjct 500 SSAIAAFFYIRVIVLMFFSEPKADGPTVAVPSPLTMTTIAVGVAVTLVLGLAPQYFLDLA 559 Query 524 DQAAQLLR 531 QA +R Sbjct 560 SQAGGFVR 567 >gi|269128600|ref|YP_003301970.1| proton-translocating NADH-quinone oxidoreductase subunit N [Thermomonospora curvata DSM 43183] gi|268313558|gb|ACY99932.1| proton-translocating NADH-quinone oxidoreductase, chain N [Thermomonospora curvata DSM 43183] Length=521 Score = 558 bits (1438), Expect = 9e-157, Method: Compositional matrix adjust. Identities = 318/532 (60%), Positives = 384/532 (73%), Gaps = 30/532 (5%) Query 3 LPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVAR 62 +PAPH+EY LAP+LIVF VAVAGVL EAF+ R WRY QV LA G AL+ +V+A Sbjct 14 IPAPHIEYGQLAPLLIVFGVAVAGVLVEAFVGRSWRYRVQVPLAFAGLLAALVWTVVLAW 73 Query 63 SIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLPG 122 H A +GAI VD TLF+QGT+L++ +++++ +AERSA Sbjct 74 R-EQPFHVAAMGAIGVDGPTLFIQGTILVLALVSLLLIAERSA----------------- 115 Query 123 LDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVL 182 FT QASA+PGS+AE+Q AG QTE+FPL M +VGGM++FPA+NDLLTMFVALEVL Sbjct 116 -AHFTAQASALPGSEAEQQTMTAGIRQTEIFPLMMFAVGGMLLFPAANDLLTMFVALEVL 174 Query 183 SLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDALA 242 SLPLYL+CGLAR RRLLSQEAA+KYFLLGAFSSAFFLYGVALLYG G++ L I D A Sbjct 175 SLPLYLLCGLARRRRLLSQEAAVKYFLLGAFSSAFFLYGVALLYGFAGSVRLSDIADQ-A 233 Query 243 ART--DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGA 300 R + + L G+AL++VGLLFK+GA PFH W PDVYQGAPTP+T MA+ T VAAFGA Sbjct 234 GRGAGGEPLLLGGIALVSVGLLFKLGAAPFHMWKPDVYQGAPTPVTALMASTTLVAAFGA 293 Query 301 LLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGV 360 LLRV YV L WRP +W +AILTM G V AV QT++KRMLAYSS+AH GF+LTGV Sbjct 294 LLRVYYVGFETLRWDWRPAMWGVAILTMVAGAVIAVTQTDIKRMLAYSSIAHAGFLLTGV 353 Query 361 IADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG 420 +A + GLS+TLFYL AY F+T+GAFA+V +VR G E A L WAGLG+RSP+V Sbjct 354 VATSQQGLSSTLFYLAAYGFTTIGAFAVVTMVR----DTGGEAAHLRRWAGLGKRSPMVA 409 Query 421 VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMF 480 + + FLLA AGIPLTSGF KFAVF AA GA PLVIVGV++S VAA+FYVRVIV MF Sbjct 410 GVFAFFLLAMAGIPLTSGFTGKFAVFSAAVDGGATPLVIVGVLASAVAAFFYVRVIVIMF 469 Query 481 FTEESGDTPHVA-APGVLSKAAIAVCTVVTVVLGIAPQPVLDLA-DQAAQLL 530 F++ D P V +P ++ A+ V VTVVLG+ PQPVLDLA D AAQ+ Sbjct 470 FSDPVADGPSVVFSPATVTAVALGVA--VTVVLGVLPQPVLDLAGDAAAQMF 519 >gi|295837112|ref|ZP_06824045.1| NADH-quinone oxidoreductase, N subunit [Streptomyces sp. SPB74] gi|197697223|gb|EDY44156.1| NADH-quinone oxidoreductase, N subunit [Streptomyces sp. SPB74] Length=554 Score = 557 bits (1435), Expect = 2e-156, Method: Compositional matrix adjust. Identities = 315/540 (59%), Positives = 394/540 (73%), Gaps = 27/540 (5%) Query 6 PHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVARSIH 65 PH+EY ++P+L+V A+ G+L EAF+PRR R Q+ L++ A A AV+V+A + Sbjct 28 PHIEYAQISPVLVVLGAAILGILVEAFVPRRARRTTQLLLSVLALAGAFAAVVVLAAQGY 87 Query 66 GS--GHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLPGL 123 G+ H A +GA+AVD LFLQGT+LLV ++AV AE R+ P + Sbjct 88 GTTKAHIAAMGALAVDGPALFLQGTILLVGLVAVFTFAEH--RLDPASHGK-------PV 138 Query 124 DSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVLS 183 DSF QA+AVPGS++E+ A +AG T TE+FPL++ ++ GM+VFPA+NDLLT+FVALEVLS Sbjct 139 DSFAAQAAAVPGSESEQAAVKAGFTTTEVFPLSLFALAGMLVFPAANDLLTLFVALEVLS 198 Query 184 LPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLT---------- 233 LPLYL+C LAR +RLLSQEAA+KYFLLGAFSSAF L+G+AL+YG G+++ Sbjct 199 LPLYLLCALARRKRLLSQEAAVKYFLLGAFSSAFLLFGIALVYGYAGSMSYGTIARVVEG 258 Query 234 -LPGIRDALAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAA 291 L I ALA +D++ L G AL+ +GLLFKVGAVPFH W PDVYQGAPTP+TGFMAA Sbjct 259 DLTSINPALADTMGNDALLLIGGALIVMGLLFKVGAVPFHMWTPDVYQGAPTPVTGFMAA 318 Query 292 ATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVA 351 ATKVAAFGALLR++YV LP L WRPV+W +AI+TM G + A+ QT++KR+LAYSSVA Sbjct 319 ATKVAAFGALLRLLYVVLPGLRWDWRPVMWGVAIVTMLGGAIIAITQTDIKRLLAYSSVA 378 Query 352 HVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAG 411 H GFIL GVIA NP G+S+ LFYL YSF T+GAFA+V LVR AG E LS WAG Sbjct 379 HAGFILAGVIATNPDGVSSVLFYLGGYSFVTIGAFAVVTLVR----DAGGEATHLSKWAG 434 Query 412 LGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYF 471 LG+RSP+V + +FLLAFAGIPLTSGF KFAVF+AAA GA+PLVIVGV+SS +AA+F Sbjct 435 LGRRSPLVAAVFGIFLLAFAGIPLTSGFAGKFAVFKAAAEGGAIPLVIVGVLSSAIAAFF 494 Query 472 YVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 Y+RVIV MFF+E D P VA P VL+ AIA+ VVTVVLG+APQ LDLA A +R Sbjct 495 YIRVIVLMFFSEPKPDGPAVAVPSVLTTTAIALGVVVTVVLGVAPQYFLDLAGSAGVFVR 554 >gi|318057830|ref|ZP_07976553.1| NADH:ubiquinone oxidoreductase subunit N [Streptomyces sp. SA3_actG] gi|318077148|ref|ZP_07984480.1| NADH:ubiquinone oxidoreductase subunit N [Streptomyces sp. SA3_actF] Length=554 Score = 555 bits (1429), Expect = 9e-156, Method: Compositional matrix adjust. Identities = 312/540 (58%), Positives = 394/540 (73%), Gaps = 27/540 (5%) Query 6 PHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVARSIH 65 PH+EY ++P+L+V A+ G+L EAF+PRR R Q+ L++ A A AV+V+A + Sbjct 28 PHIEYAQISPVLVVLGAAILGILVEAFVPRRARRTTQLLLSVLALAGAFAAVVVLAAQGY 87 Query 66 GS--GHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLPGL 123 G+ H A +GA+AVD LFLQGT+LLV ++AV AE ++ P+ + Sbjct 88 GTTKAHIAAMGALAVDGPALFLQGTILLVGLVAVFTFAEH--KLDPETHGK-------PV 138 Query 124 DSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVLS 183 DSF Q +AVPGS++E+ A +AG T TE+FPL++ ++ GM+VFPA+NDLLT+FVALEVLS Sbjct 139 DSFAAQPAAVPGSESEQAAVKAGFTTTEVFPLSLFALAGMLVFPAANDLLTLFVALEVLS 198 Query 184 LPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLT---------- 233 LPLYL+C LAR +RLLSQEAA+KYFLLGAFSSAF L+G+AL+YG G+++ Sbjct 199 LPLYLLCALARRKRLLSQEAAVKYFLLGAFSSAFLLFGIALVYGYAGSMSYGVIARVVEG 258 Query 234 -LPGIRDALAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAA 291 L I ALA +D++ L G AL+ +GLLFKVGAVPFH W PDVYQGAPTP+TGFMAA Sbjct 259 DLTSINPALADTMGNDALLLIGGALIVMGLLFKVGAVPFHMWTPDVYQGAPTPVTGFMAA 318 Query 292 ATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVA 351 ATKVAAFGALLR++YV LP L WRPV+W +AI+TM G + A+ QT++KR+LAYSS+A Sbjct 319 ATKVAAFGALLRLLYVVLPGLRWDWRPVMWGVAIVTMLGGAIIAITQTDIKRLLAYSSIA 378 Query 352 HVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAG 411 H GFIL GVIA NP G+S+ LFYL YSF T+GAFA+V LVR AG E LS WAG Sbjct 379 HAGFILAGVIATNPDGVSSVLFYLGGYSFVTIGAFAVVTLVR----DAGGEATHLSKWAG 434 Query 412 LGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYF 471 LG+RSP+V + +FLLAFAGIPLTSGF KFAVF+AAA GA+PLVIVGV+SS +AA+F Sbjct 435 LGRRSPLVAAVFGIFLLAFAGIPLTSGFAGKFAVFKAAAEGGAIPLVIVGVLSSAIAAFF 494 Query 472 YVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 Y+RVIV MFF+E D P VA P VL+ AIA+ VVTVVLG+APQ LDLA A +R Sbjct 495 YIRVIVLMFFSEPKADGPAVAVPSVLTTTAIALGVVVTVVLGVAPQYFLDLAGSAGVFVR 554 >gi|182436764|ref|YP_001824483.1| NADH dehydrogenase subunit N [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777359|ref|ZP_08236624.1| NAD(P)H-quinone oxidoreductase subunit 2 [Streptomyces cf. griseus XylebKG-1] gi|288559019|sp|B1W506.1|NUON3_STRGG RecName: Full=NADH-quinone oxidoreductase subunit N 3; AltName: Full=NADH dehydrogenase I subunit N 3; AltName: Full=NDH-1 subunit N 3 gi|178465280|dbj|BAG19800.1| putative NADH dehydrogenase chain N [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657692|gb|EGE42538.1| NAD(P)H-quinone oxidoreductase subunit 2 [Streptomyces griseus XylebKG-1] Length=554 Score = 554 bits (1427), Expect = 2e-155, Method: Compositional matrix adjust. Identities = 305/541 (57%), Positives = 386/541 (72%), Gaps = 27/541 (4%) Query 5 APHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVARSI 64 AP +EY L P+LI+ AV G+L EAF+PRR RY Q+ L + A + A++ +A Sbjct 27 APKIEYTQLMPVLIIVVAAVLGILVEAFVPRRARYHTQLFLTVVAVAGSFAAIVGLAAGG 86 Query 65 HGSGHAAV--LGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLPG 122 +G+ A + +GAIA+D TLFLQGT+LLV ++A+ AER R+ P Sbjct 87 YGTTDAGIVAMGAIAIDGPTLFLQGTILLVAMVALFTFAER--RLDPGSNGNR------- 137 Query 123 LDSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVL 182 +DSF QA +VPG + E+ A RAG T TE+FPL + SV G++VFPA+NDLLT+F+ALEV Sbjct 138 VDSFAAQAGSVPGGEGEKAAVRAGFTTTEVFPLLLFSVAGLLVFPAANDLLTLFIALEVF 197 Query 183 SLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDALA 242 SLPLYL+C +AR +RL+SQEAA+KYFLLGAFSSAF L+G+ALLYG G+L+ I + + Sbjct 198 SLPLYLLCAVARRKRLMSQEAAVKYFLLGAFSSAFLLFGIALLYGYAGSLSYADIANVVD 257 Query 243 ART------------DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMA 290 +D++ L G A++ GLLFKVGAVPFH W PDVYQGAPTP+TGFMA Sbjct 258 GSVLEIDPALADTMGNDALLLIGGAMILTGLLFKVGAVPFHMWTPDVYQGAPTPVTGFMA 317 Query 291 AATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSV 350 AATKVAAFGALLR++YVALP L RPV+WA+AI+TM G + A+ QT++KR+LAYSS+ Sbjct 318 AATKVAAFGALLRLLYVALPGLAWDLRPVMWAVAIVTMLGGAIVAITQTDIKRLLAYSSI 377 Query 351 AHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWA 410 AH GFIL GVIA +P G+S+ LFYL+AYSF T+GAFA+V LVR AG E LS WA Sbjct 378 AHAGFILAGVIAASPEGISSVLFYLLAYSFVTVGAFAVVTLVR----DAGGEATHLSKWA 433 Query 411 GLGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAY 470 GLG+RSP+V + ++FLLAFAGIPLTSGF KFAVF+AAA GA LV+VGV+SS VAA+ Sbjct 434 GLGRRSPLVAAVFAVFLLAFAGIPLTSGFSGKFAVFKAAAEGGAGALVVVGVLSSAVAAF 493 Query 471 FYVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLL 530 FY+RVIV MFF+E D P VA P L+ IAV VT+VLG+APQ LDLA QA + Sbjct 494 FYIRVIVLMFFSEPKADGPTVAVPSPLTMTTIAVGVAVTLVLGLAPQYFLDLASQAGVFV 553 Query 531 R 531 R Sbjct 554 R 554 >gi|302521207|ref|ZP_07273549.1| NADH dehydrogenase subunit N [Streptomyces sp. SPB78] gi|302430102|gb|EFL01918.1| NADH dehydrogenase subunit N [Streptomyces sp. SPB78] Length=554 Score = 554 bits (1427), Expect = 2e-155, Method: Compositional matrix adjust. Identities = 312/540 (58%), Positives = 394/540 (73%), Gaps = 27/540 (5%) Query 6 PHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVARSIH 65 PH+EY ++P+L+V A+ G+L EAF+PRR R Q+ L++ A A AV+V+A + Sbjct 28 PHIEYAQISPVLVVLGAAILGILVEAFVPRRARRTTQLLLSVLALAGAFAAVVVLAAQGY 87 Query 66 GS--GHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLPGL 123 G+ H A +GA+AVD LFLQGT+LLV ++AV AE ++ P+ + Sbjct 88 GTTKAHIAAMGALAVDGPALFLQGTILLVGLVAVFTFAEH--KLDPETHGR-------PV 138 Query 124 DSFTPQASAVPGSDAERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVLS 183 DSF Q +AVPGS++E+ A +AG T TE+FPL++ ++ GM+VFPA+NDLLT+FVALEVLS Sbjct 139 DSFAAQPAAVPGSESEQAAVKAGFTTTEVFPLSLFALAGMLVFPAANDLLTLFVALEVLS 198 Query 184 LPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLT---------- 233 LPLYL+C LAR +RLLSQEAA+KYFLLGAFSSAF L+G+AL+YG G+++ Sbjct 199 LPLYLLCALARRKRLLSQEAAVKYFLLGAFSSAFLLFGIALVYGYAGSMSYGVIARVVEG 258 Query 234 -LPGIRDALAART-DDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAA 291 L I ALA +D++ L G AL+ +GLLFKVGAVPFH W PDVYQGAPTP+TGFMAA Sbjct 259 DLTSINPALADTMGNDALLLIGGALIVMGLLFKVGAVPFHMWTPDVYQGAPTPVTGFMAA 318 Query 292 ATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVA 351 ATKVAAFGALLR++YV LP L WRPV+W +AI+TM G + A+ QT++KR+LAYSS+A Sbjct 319 ATKVAAFGALLRLLYVVLPGLRWDWRPVMWGVAIVTMLGGAIIAITQTDIKRLLAYSSIA 378 Query 352 HVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAG 411 H GFIL GVIA NP G+S+ LFYL YSF T+GAFA+V LVR AG E LS WAG Sbjct 379 HAGFILAGVIATNPDGVSSVLFYLGGYSFVTIGAFAVVTLVR----DAGGEATHLSKWAG 434 Query 412 LGQRSPIVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYF 471 LG+RSP+V + +FLLAFAGIPLTSGF KFAVF+AAA GA+PLVIVGV+SS +AA+F Sbjct 435 LGRRSPLVAAVFGIFLLAFAGIPLTSGFAGKFAVFKAAAEGGAIPLVIVGVLSSAIAAFF 494 Query 472 YVRVIVSMFFTEESGDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR 531 Y+RVIV MFF+E D P VA P VL+ AIA+ VVTVVLG+APQ LDLA A +R Sbjct 495 YIRVIVLMFFSEPKADGPAVAVPSVLTTTAIALGVVVTVVLGVAPQYFLDLAGSAGVFVR 554 Lambda K H 0.326 0.137 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1171374539652 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40