BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3163c Length=423 Score E Sequences producing significant alignments: (Bits) Value gi|15610299|ref|NP_217679.1| hypothetical protein Rv3163c [Mycob... 834 0.0 gi|31794340|ref|NP_856833.1| hypothetical protein Mb3188c [Mycob... 833 0.0 gi|340628140|ref|YP_004746592.1| hypothetical protein MCAN_31781... 832 0.0 gi|289755283|ref|ZP_06514661.1| conserved hypothetical protein [... 831 0.0 gi|308406067|ref|ZP_07495023.2| conserved secreted protein [Myco... 818 0.0 gi|308232355|ref|ZP_07415817.2| conserved secreted protein [Myco... 743 0.0 gi|240169651|ref|ZP_04748310.1| hypothetical protein MkanA1_1007... 652 0.0 gi|118617962|ref|YP_906294.1| hypothetical protein MUL_2476 [Myc... 647 0.0 gi|296169175|ref|ZP_06850829.1| ATPase family protein [Mycobacte... 629 2e-178 gi|254819287|ref|ZP_05224288.1| putative secreted protein [Mycob... 627 1e-177 gi|183981423|ref|YP_001849714.1| hypothetical protein MMAR_1400 ... 624 1e-176 gi|342861070|ref|ZP_08717719.1| putative conserved secreted prot... 611 6e-173 gi|254776472|ref|ZP_05217988.1| hypothetical protein MaviaA2_176... 582 5e-164 gi|336459328|gb|EGO38271.1| hypothetical protein MAPs_04270 [Myc... 570 2e-160 gi|118463519|ref|YP_883202.1| hypothetical protein MAV_4050 [Myc... 550 2e-154 gi|254233777|ref|ZP_04927102.1| hypothetical protein TBCG_03099 ... 539 4e-151 gi|333990622|ref|YP_004523236.1| hypothetical protein JDM601_198... 535 4e-150 gi|145221079|ref|YP_001131757.1| hypothetical protein Mflv_0475 ... 532 5e-149 gi|120401209|ref|YP_951038.1| hypothetical protein Mvan_0181 [My... 509 3e-142 gi|126432758|ref|YP_001068449.1| hypothetical protein Mjls_0145 ... 496 4e-138 gi|108797135|ref|YP_637332.1| hypothetical protein Mmcs_0155 [My... 494 1e-137 gi|41409315|ref|NP_962151.1| hypothetical protein MAP3217c [Myco... 489 3e-136 gi|118471031|ref|YP_888158.1| ATPase AAA [Mycobacterium smegmati... 479 4e-133 gi|54022424|ref|YP_116666.1| hypothetical protein nfa4600 [Nocar... 398 8e-109 gi|169628996|ref|YP_001702645.1| hypothetical protein MAB_1908c ... 374 2e-101 gi|333918362|ref|YP_004491943.1| hypothetical protein AS9A_0689 ... 363 3e-98 gi|111021500|ref|YP_704472.1| hypothetical protein RHA1_ro04528 ... 358 1e-96 gi|226363853|ref|YP_002781635.1| hypothetical protein ROP_44430 ... 351 1e-94 gi|256392261|ref|YP_003113825.1| hypothetical protein Caci_3075 ... 168 2e-39 gi|329934283|ref|ZP_08284362.1| hypothetical protein SGM_0074 [S... 148 2e-33 gi|21224460|ref|NP_630239.1| hypothetical protein SCO6133 [Strep... 142 7e-32 gi|289768226|ref|ZP_06527604.1| ATPase [Streptomyces lividans TK... 142 2e-31 gi|291299108|ref|YP_003510386.1| hypothetical protein Snas_1590 ... 132 8e-29 gi|254173304|ref|ZP_04879977.1| conserved hypothetical protein [... 120 4e-25 gi|240102247|ref|YP_002958555.1| MoxR associated protein, contai... 118 2e-24 gi|315501954|ref|YP_004080841.1| hypothetical protein ML5_1150 [... 115 1e-23 gi|330465825|ref|YP_004403568.1| hypothetical protein VAB18032_0... 115 1e-23 gi|302865409|ref|YP_003834046.1| hypothetical protein Micau_0906... 114 2e-23 gi|212224835|ref|YP_002308071.1| protein TON_1684 [Thermococcus ... 111 3e-22 gi|159036502|ref|YP_001535755.1| hypothetical protein Sare_0846 ... 110 3e-22 gi|238062765|ref|ZP_04607474.1| hypothetical protein MCAG_03731 ... 107 5e-21 gi|145593461|ref|YP_001157758.1| hypothetical protein Strop_0903... 103 7e-20 gi|315231670|ref|YP_004072106.1| hypothetical protein TERMP_0190... 99.4 1e-18 gi|14590643|ref|NP_142711.1| hypothetical protein PH0774 [Pyroco... 97.8 3e-18 gi|337283779|ref|YP_004623253.1| hypothetical protein PYCH_02840... 97.1 6e-18 gi|332159056|ref|YP_004424335.1| hypothetical protein PNA2_1416 ... 95.9 1e-17 gi|18976890|ref|NP_578247.1| hypothetical protein PF0518 [Pyroco... 95.5 1e-17 gi|254167952|ref|ZP_04874800.1| conserved hypothetical protein [... 92.8 1e-16 gi|254168120|ref|ZP_04874967.1| conserved hypothetical protein [... 92.8 1e-16 gi|291301392|ref|YP_003512670.1| hypothetical protein Snas_3922 ... 92.4 1e-16 >gi|15610299|ref|NP_217679.1| hypothetical protein Rv3163c [Mycobacterium tuberculosis H37Rv] gi|15842740|ref|NP_337777.1| hypothetical protein MT3252 [Mycobacterium tuberculosis CDC1551] gi|121639047|ref|YP_979271.1| putative secreted protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 50 more sequence titles Length=423 Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/423 (99%), Positives = 423/423 (100%), Gaps = 0/423 (0%) Query 1 VIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 +IQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP Sbjct 1 MIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 Query 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS 120 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS Sbjct 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS 120 Query 121 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH 180 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH Sbjct 121 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH 180 Query 181 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP 240 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP Sbjct 181 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP 240 Query 241 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG 300 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG Sbjct 241 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG 300 Query 301 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPL 360 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPL Sbjct 301 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPL 360 Query 361 QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRA 420 QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRA Sbjct 361 QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRA 420 Query 421 RLP 423 RLP Sbjct 421 RLP 423 >gi|31794340|ref|NP_856833.1| hypothetical protein Mb3188c [Mycobacterium bovis AF2122/97] gi|31619936|emb|CAD95280.1| POSSIBLE CONSERVED SECRETED PROTEIN [Mycobacterium bovis AF2122/97] Length=423 Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/423 (99%), Positives = 423/423 (100%), Gaps = 0/423 (0%) Query 1 VIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 +IQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP Sbjct 1 MIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 Query 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS 120 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS Sbjct 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS 120 Query 121 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH 180 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH Sbjct 121 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH 180 Query 181 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP 240 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP Sbjct 181 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP 240 Query 241 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG 300 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG Sbjct 241 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG 300 Query 301 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPL 360 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALI+LRKRGHVVVAVDVLDSCPL Sbjct 301 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIELRKRGHVVVAVDVLDSCPL 360 Query 361 QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRA 420 QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRA Sbjct 361 QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRA 420 Query 421 RLP 423 RLP Sbjct 421 RLP 423 >gi|340628140|ref|YP_004746592.1| hypothetical protein MCAN_31781 [Mycobacterium canettii CIPT 140010059] gi|340006330|emb|CCC45509.1| putative conserved secreted protein [Mycobacterium canettii CIPT 140010059] Length=423 Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/423 (99%), Positives = 423/423 (100%), Gaps = 0/423 (0%) Query 1 VIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 +IQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP Sbjct 1 MIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 Query 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS 120 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAG+QFEALESVSRRTTTVS Sbjct 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGIQFEALESVSRRTTTVS 120 Query 121 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH 180 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH Sbjct 121 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH 180 Query 181 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP 240 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP Sbjct 181 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP 240 Query 241 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG 300 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG Sbjct 241 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG 300 Query 301 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPL 360 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLD+EFALALIDLRKRGHVVVAVDVLDSCPL Sbjct 301 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDSEFALALIDLRKRGHVVVAVDVLDSCPL 360 Query 361 QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRA 420 QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRA Sbjct 361 QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRA 420 Query 421 RLP 423 RLP Sbjct 421 RLP 423 >gi|289755283|ref|ZP_06514661.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289695870|gb|EFD63299.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=423 Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/423 (99%), Positives = 421/423 (99%), Gaps = 0/423 (0%) Query 1 VIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 +IQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP Sbjct 1 MIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 Query 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS 120 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS Sbjct 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS 120 Query 121 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH 180 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH Sbjct 121 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH 180 Query 181 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP 240 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP Sbjct 181 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP 240 Query 241 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG 300 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG Sbjct 241 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG 300 Query 301 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPL 360 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPL Sbjct 301 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPL 360 Query 361 QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRA 420 QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQS GALPNRRRRGRGRASR Sbjct 361 QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSTGALPNRRRRGRGRASRT 420 Query 421 RLP 423 RLP Sbjct 421 RLP 423 >gi|308406067|ref|ZP_07495023.2| conserved secreted protein [Mycobacterium tuberculosis SUMu012] gi|308364578|gb|EFP53429.1| conserved secreted protein [Mycobacterium tuberculosis SUMu012] Length=415 Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/415 (99%), Positives = 415/415 (100%), Gaps = 0/415 (0%) Query 9 LRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVHGDP 68 +RWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVHGDP Sbjct 1 MRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVHGDP 60 Query 69 DSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRWGR 128 DSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRWGR Sbjct 61 DSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRWGR 120 Query 129 YPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVGPG 188 YPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVGPG Sbjct 121 YPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVGPG 180 Query 189 VEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATEAT 248 VEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATEAT Sbjct 181 VEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATEAT 240 Query 249 ERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGFENT 308 ERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGFENT Sbjct 241 ERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGFENT 300 Query 309 TGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQDQLDPLV 368 TGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQDQLDPLV Sbjct 301 TGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQDQLDPLV 360 Query 369 VRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRARLP 423 VRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRARLP Sbjct 361 VRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGRASRARLP 415 >gi|308232355|ref|ZP_07415817.2| conserved secreted protein [Mycobacterium tuberculosis SUMu001] gi|308370168|ref|ZP_07666880.1| conserved secreted protein [Mycobacterium tuberculosis SUMu002] gi|308371252|ref|ZP_07424349.2| conserved secreted protein [Mycobacterium tuberculosis SUMu003] 17 more sequence titles Length=375 Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/375 (99%), Positives = 375/375 (100%), Gaps = 0/375 (0%) Query 49 VLCSISWQRPVPVIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEA 108 +LCSISWQRPVPVIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEA Sbjct 1 MLCSISWQRPVPVIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEA 60 Query 109 LESVSRRTTTVSAVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPL 168 LESVSRRTTTVSAVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPL Sbjct 61 LESVSRRTTTVSAVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPL 120 Query 169 PQTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAA 228 PQTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAA Sbjct 121 PQTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAA 180 Query 229 DVVVLIDMYRQPAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQ 288 DVVVLIDMYRQPAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQ Sbjct 181 DVVVLIDMYRQPAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQ 240 Query 289 RQFYRVLDTVLGAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHV 348 RQFYRVLDTVLGAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHV Sbjct 241 RQFYRVLDTVLGAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHV 300 Query 349 VVAVDVLDSCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPN 408 VVAVDVLDSCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPN Sbjct 301 VVAVDVLDSCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPN 360 Query 409 RRRRGRGRASRARLP 423 RRRRGRGRASRARLP Sbjct 361 RRRRGRGRASRARLP 375 >gi|240169651|ref|ZP_04748310.1| hypothetical protein MkanA1_10077 [Mycobacterium kansasii ATCC 12478] Length=425 Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/420 (82%), Positives = 367/420 (88%), Gaps = 4/420 (0%) Query 1 VIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 +IQ EVELRWRAS LTLAIAT A ALAAAV+ GRWQLIAFAAPLLGVLCSI WQRPVP Sbjct 1 MIQPREVELRWRASPLTLAIATGAAAALAAAVIGGRWQLIAFAAPLLGVLCSIYWQRPVP 60 Query 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAA----VELTVSALAGMQFEALESVSRRT 116 +QVHG+PDSQRCFENE V VW TT+S + +E+TVSA GMQ + +ES R Sbjct 61 AVQVHGEPDSQRCFENEQAHVKVWATTDSTAQSGSERIEVTVSAPTGMQLDVVESDCRPA 120 Query 117 TTVSAVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDR 176 TTV+A A RWGRYPIRARV VVARGGLL G GTVDAAE+VVFPLTPPQ T +PQTELLDR Sbjct 121 TTVAASAPRWGRYPIRARVDVVARGGLLTGTGTVDAAEVVVFPLTPPQPTAIPQTELLDR 180 Query 177 LGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDM 236 LGAHLTRH+GPGVEYADIRPYVPGDQLRAVNW VSARRGRLHVT+RLTDRAADVVVLID Sbjct 181 LGAHLTRHIGPGVEYADIRPYVPGDQLRAVNWAVSARRGRLHVTQRLTDRAADVVVLIDT 240 Query 237 YRQPAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLD 296 YRQP GPATEATER+ RGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLD Sbjct 241 YRQPPGPATEATERIARGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLD 300 Query 297 TVLGAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLD 356 TVLG G+GFE TTGTLAPRAAVPAGA+VIAFSTLLDTEFALALIDLRKRGHVVVAVDVLD Sbjct 301 TVLGTGDGFERTTGTLAPRAAVPAGAIVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLD 360 Query 357 SCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGR 416 P + + DPLVVR+WALQRSAMYRDMAT+GVDVLSW D L+QSM LP+RRRRGRG+ Sbjct 361 GSPFEGEQDPLVVRLWALQRSAMYRDMATVGVDVLSWQGDRPLEQSMSTLPDRRRRGRGQ 420 >gi|118617962|ref|YP_906294.1| hypothetical protein MUL_2476 [Mycobacterium ulcerans Agy99] gi|118570072|gb|ABL04823.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=425 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/412 (79%), Positives = 358/412 (87%), Gaps = 4/412 (0%) Query 1 VIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 +I T +VELRWRAS LTLA+ATCAGVALAAA++AGRWQLIAFAAPLLGVLCSI WQRPVP Sbjct 1 MIPTRDVELRWRASPLTLAVATCAGVALAAALIAGRWQLIAFAAPLLGVLCSIYWQRPVP 60 Query 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESV----DAAVELTVSALAGMQFEALESVSRRT 116 + VH +PD QRCFE+E V V VW T +S AV +TV A AGMQ + S SR+ Sbjct 61 TVHVHAEPDLQRCFEDERVGVKVWATVDSTAGEGSEAVLVTVRAPAGMQLDIDASTSRQA 120 Query 117 TTVSAVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDR 176 +V V QRWGRYPI ARV VVARGGLL+G GTV+AA++VVFPLTPPQ T +PQTELLDR Sbjct 121 KSVEVVTQRWGRYPIEARVDVVARGGLLIGDGTVEAAQVVVFPLTPPQPTAIPQTELLDR 180 Query 177 LGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDM 236 LGAHLTR++GPGVEYADIRPYVPGDQLRAVNW VSARRGRLHVT+RLTDRAADV+VLID Sbjct 181 LGAHLTRYIGPGVEYADIRPYVPGDQLRAVNWAVSARRGRLHVTQRLTDRAADVIVLIDT 240 Query 237 YRQPAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLD 296 YRQP GPA+EATERV RGAAQVVQTALRNGDRAGI+ALGGNRPRW+GADIGQRQFYRVLD Sbjct 241 YRQPPGPASEATERVARGAAQVVQTALRNGDRAGIIALGGNRPRWMGADIGQRQFYRVLD 300 Query 297 TVLGAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLD 356 TVLG+G+ FE TTGTLAPRAAVP GA+VIAFSTLLDTEFALALIDLRKRGHVVVAVDVLD Sbjct 301 TVLGSGDRFEKTTGTLAPRAAVPTGAIVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLD 360 Query 357 SCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPN 408 P + + DPLVVRMWALQR+ MYRDMAT+GVDVL WP + +L+QSMGALP+ Sbjct 361 GAPFEGEQDPLVVRMWALQRAGMYRDMATVGVDVLDWPGNRALEQSMGALPD 412 >gi|296169175|ref|ZP_06850829.1| ATPase family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896154|gb|EFG75820.1| ATPase family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=419 Score = 629 bits (1623), Expect = 2e-178, Method: Compositional matrix adjust. Identities = 324/403 (81%), Positives = 355/403 (89%), Gaps = 1/403 (0%) Query 7 VELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVHG 66 VE WRASQLT AIATCAG+ALA V+AGRWQLIAFAAPLLGVLCSISWQRPVP ++VHG Sbjct 6 VEFHWRASQLTRAIATCAGLALAVGVIAGRWQLIAFAAPLLGVLCSISWQRPVPTVRVHG 65 Query 67 DPDSQRCFENEHVRVTVWVTTE-SVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQR 125 +PDSQRCFEN+ VR++V T A+ELTV A+ GMQ E L++ SRR V+A AQR Sbjct 66 EPDSQRCFENDRVRLSVRATLHGDATEAIELTVPAVEGMQLEVLDARSRRAKNVAATAQR 125 Query 126 WGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHV 185 WGRY RARV VVARGGLL G TVDAAE++VFPLTPPQSTP+PQTELLDRLGAHLTRH+ Sbjct 126 WGRYFARARVDVVARGGLLAGTATVDAAEVIVFPLTPPQSTPIPQTELLDRLGAHLTRHI 185 Query 186 GPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPAT 245 GPGVEYADIR YV GDQLRAVNW VSARRG+LHVT+RLTDRAADVVVLID YRQP GPAT Sbjct 186 GPGVEYADIRAYVAGDQLRAVNWPVSARRGQLHVTQRLTDRAADVVVLIDTYRQPPGPAT 245 Query 246 EATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGF 305 EATERVVRGAAQVVQTALR+GDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAG+ F Sbjct 246 EATERVVRGAAQVVQTALRHGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGDRF 305 Query 306 ENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQDQLD 365 ENTTGTLAP AAVPAGA+VIAFSTLLDTEFALALIDLRKRGHVVVAVD+LDS P + + D Sbjct 306 ENTTGTLAPGAAVPAGAIVIAFSTLLDTEFALALIDLRKRGHVVVAVDILDSSPFEGEQD 365 Query 366 PLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPN 408 PLV RMWALQRS+MYRDMAT+GVD++SW D L+QSMG LP+ Sbjct 366 PLVNRMWALQRSSMYRDMATVGVDIVSWQGDSGLEQSMGVLPD 408 >gi|254819287|ref|ZP_05224288.1| putative secreted protein [Mycobacterium intracellulare ATCC 13950] Length=420 Score = 627 bits (1616), Expect = 1e-177, Method: Compositional matrix adjust. Identities = 313/409 (77%), Positives = 352/409 (87%), Gaps = 1/409 (0%) Query 1 VIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 + Q E+E RWRAS LT A+ATCAG A+AAAV+ RWQLIAFAAPLLGVLCSISWQR VP Sbjct 1 MTQGREIEFRWRASGLTRAVATCAGFAMAAAVIGARWQLIAFAAPLLGVLCSISWQRRVP 60 Query 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVD-AAVELTVSALAGMQFEALESVSRRTTTV 119 I+VHG+PD+QRCFE+E + VW++ E +A LTV + GM+ E ++ + R TV Sbjct 61 EIRVHGEPDAQRCFESEQAHLRVWISGEEQGLSAARLTVPDVEGMELEIADADAGRAKTV 120 Query 120 SAVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGA 179 +A AQRWGRY I ARV V+ARGGLL G G VDAAE++VFPLTPPQ+TP+PQ ELLDRLGA Sbjct 121 AATAQRWGRYRIAARVEVIARGGLLTGTGVVDAAEVIVFPLTPPQATPIPQIELLDRLGA 180 Query 180 HLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQ 239 HLTRHVGPGVEYADIRPYVPGDQLRAVNW VSARRG+LHVT RLTDRAADVVVLID YRQ Sbjct 181 HLTRHVGPGVEYADIRPYVPGDQLRAVNWPVSARRGQLHVTERLTDRAADVVVLIDGYRQ 240 Query 240 PAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVL 299 PAGPAT ATERVVRGAAQVVQTALR+GDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVL Sbjct 241 PAGPATVATERVVRGAAQVVQTALRHGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVL 300 Query 300 GAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCP 359 GAG+ FE TTGTLAPRAAVPAGA+VIAFSTLLDTEFALALIDLR+RGHVV+AVD+LDS P Sbjct 301 GAGDRFERTTGTLAPRAAVPAGAIVIAFSTLLDTEFALALIDLRRRGHVVLAVDILDSSP 360 Query 360 LQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPN 408 +D DPLV RMW LQRS+MYRDMAT+GVD++SW + L+QSMG LP+ Sbjct 361 FEDDQDPLVDRMWVLQRSSMYRDMATVGVDIVSWRGESGLEQSMGVLPD 409 >gi|183981423|ref|YP_001849714.1| hypothetical protein MMAR_1400 [Mycobacterium marinum M] gi|183174749|gb|ACC39859.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=425 Score = 624 bits (1608), Expect = 1e-176, Method: Compositional matrix adjust. Identities = 325/412 (79%), Positives = 361/412 (88%), Gaps = 4/412 (0%) Query 1 VIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 +IQT +VELRWRAS LTLA+ATCA VALAAA++AGRWQLIAFAAPLLGVLCSI WQRPVP Sbjct 1 MIQTRDVELRWRASPLTLAVATCAAVALAAALIAGRWQLIAFAAPLLGVLCSIYWQRPVP 60 Query 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESV----DAAVELTVSALAGMQFEALESVSRRT 116 + VH +PD QRCFE+E V V VW T +S AV +TV A AGMQ + S SR+ Sbjct 61 TVHVHAEPDLQRCFEDERVGVKVWATVDSAAGEGSEAVLVTVRAPAGMQLDIDASSSRQA 120 Query 117 TTVSAVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDR 176 +V V QRWGRYPI+ARV VVARGGLLMG GTV+AA++VVFPLTPPQ T +PQTELLDR Sbjct 121 KSVEVVTQRWGRYPIKARVDVVARGGLLMGDGTVEAAQVVVFPLTPPQPTAIPQTELLDR 180 Query 177 LGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDM 236 LGAHLTR++GPGVEYADIRPYVPGDQLRAVNW VSARRGRLHVT+RLTDRAADV+VLID Sbjct 181 LGAHLTRYIGPGVEYADIRPYVPGDQLRAVNWAVSARRGRLHVTQRLTDRAADVIVLIDT 240 Query 237 YRQPAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLD 296 YRQP GPA+EATERV RGAAQVVQTALRNGDRAGI+ALGGNRPRW+GADIGQRQFYRVLD Sbjct 241 YRQPPGPASEATERVARGAAQVVQTALRNGDRAGIIALGGNRPRWMGADIGQRQFYRVLD 300 Query 297 TVLGAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLD 356 TVLG+G+ FE TTGTLAPRAAVPAGA+VIAFSTLLDTEFALALIDLRKRGHVVVAVDVLD Sbjct 301 TVLGSGDRFEKTTGTLAPRAAVPAGAIVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLD 360 Query 357 SCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPN 408 S P + + DPLVVRMWALQR+ MYRDMAT+GVDVL WP + +L+QSMGALP+ Sbjct 361 SAPFEGEQDPLVVRMWALQRAGMYRDMATVGVDVLDWPGNRALEQSMGALPD 412 >gi|342861070|ref|ZP_08717719.1| putative conserved secreted protein [Mycobacterium colombiense CECT 3035] gi|342131514|gb|EGT84784.1| putative conserved secreted protein [Mycobacterium colombiense CECT 3035] Length=413 Score = 611 bits (1576), Expect = 6e-173, Method: Compositional matrix adjust. Identities = 318/401 (80%), Positives = 350/401 (88%), Gaps = 1/401 (0%) Query 8 ELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVHGD 67 E RWRAS+LT IATCAG A+AAAV+ RWQLIAFAAPLLGVLCSISWQRPVP I VHG+ Sbjct 3 EFRWRASELTRTIATCAGFAMAAAVIGARWQLIAFAAPLLGVLCSISWQRPVPTIHVHGE 62 Query 68 PDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRWG 127 PD+QRCFE+E V VWVT E +AV++T+ + GMQ E ES + T++A AQRWG Sbjct 63 PDAQRCFESEQAHVRVWVTQEGT-SAVQVTIPDIVGMQLEIPESDVGQEKTITATAQRWG 121 Query 128 RYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVGP 187 RY I ARV VARGGLL G TV AAE++VFPLTPPQ TP+PQTELLDRLGAHLTRH+GP Sbjct 122 RYSIGARVDAVARGGLLTGTATVGAAEVIVFPLTPPQPTPIPQTELLDRLGAHLTRHIGP 181 Query 188 GVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATEA 247 GVEYADIRPYVPGDQLRAVNW VSARRG+LHVT+RLTDRAADVVVLID YRQPAGPATEA Sbjct 182 GVEYADIRPYVPGDQLRAVNWPVSARRGQLHVTQRLTDRAADVVVLIDGYRQPAGPATEA 241 Query 248 TERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGFEN 307 TERVVRGAAQVVQTALR+GDRAGIVALGGN PRWLGADIGQRQFYRVLDTVL AG+ FE+ Sbjct 242 TERVVRGAAQVVQTALRHGDRAGIVALGGNHPRWLGADIGQRQFYRVLDTVLNAGDRFEH 301 Query 308 TTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQDQLDPL 367 TTGTLAPRAAVP GA+VIAFSTLLDTEFALALIDLRKRGHVV+AVD+LDS P +D+ DPL Sbjct 302 TTGTLAPRAAVPTGAIVIAFSTLLDTEFALALIDLRKRGHVVLAVDILDSSPFEDEQDPL 361 Query 368 VVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPN 408 V RMWALQRSAMYRDMATIGVD++SWP D L+QSMG LP+ Sbjct 362 VDRMWALQRSAMYRDMATIGVDIVSWPGDSGLEQSMGVLPD 402 >gi|254776472|ref|ZP_05217988.1| hypothetical protein MaviaA2_17634 [Mycobacterium avium subsp. avium ATCC 25291] Length=400 Score = 582 bits (1499), Expect = 5e-164, Method: Compositional matrix adjust. Identities = 291/377 (78%), Positives = 324/377 (86%), Gaps = 0/377 (0%) Query 32 VVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVHGDPDSQRCFENEHVRVTVWVTTESVD 91 V+ RWQLIAFAAPLLGVL +ISWQ VP + VH +PD+QRCFE E VTVW E Sbjct 13 VIGARWQLIAFAAPLLGVLGTISWQPRVPAVAVHAEPDTQRCFEGEPAHVTVWGIEEQGP 72 Query 92 AAVELTVSALAGMQFEALESVSRRTTTVSAVAQRWGRYPIRARVAVVARGGLLMGAGTVD 151 AV LTV + GM+ + ES SRR TV A AQRWGRY + ARV V+ARGGLL G VD Sbjct 73 CAVRLTVPPVEGMELQFGESGSRRGKTVRATAQRWGRYHVAARVDVLARGGLLSGTALVD 132 Query 152 AAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVS 211 AAE++VFPLTPPQ TP+P+TELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNW VS Sbjct 133 AAEVIVFPLTPPQPTPIPRTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWAVS 192 Query 212 ARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATEATERVVRGAAQVVQTALRNGDRAGI 271 ARR +LHVT+RLTDRAADVVVLID YRQPAGPAT+ATER+VRGAAQVVQTALR+GDRAGI Sbjct 193 ARRRQLHVTQRLTDRAADVVVLIDGYRQPAGPATQATERIVRGAAQVVQTALRHGDRAGI 252 Query 272 VALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGFENTTGTLAPRAAVPAGAVVIAFSTLL 331 VALGGNRPRWLGADIGQRQFYRVLDTVL AG+GFE+TTGTLAPRAAVPAGA+VIAFSTLL Sbjct 253 VALGGNRPRWLGADIGQRQFYRVLDTVLAAGDGFEHTTGTLAPRAAVPAGAIVIAFSTLL 312 Query 332 DTEFALALIDLRKRGHVVVAVDVLDSCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVL 391 DTEFALALIDLR+RGHVV+AVD+L+ P +D+ DPLV RMWALQRSAMYRDMAT+GVD++ Sbjct 313 DTEFALALIDLRRRGHVVLAVDILEGSPFEDEQDPLVDRMWALQRSAMYRDMATVGVDIV 372 Query 392 SWPADHSLQQSMGALPN 408 WP D L+QSMG LP+ Sbjct 373 WWPGDRGLEQSMGVLPD 389 >gi|336459328|gb|EGO38271.1| hypothetical protein MAPs_04270 [Mycobacterium avium subsp. paratuberculosis S397] Length=400 Score = 570 bits (1469), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 287/377 (77%), Positives = 319/377 (85%), Gaps = 0/377 (0%) Query 32 VVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVHGDPDSQRCFENEHVRVTVWVTTESVD 91 V+ RWQLIAFAAPLLGVL +ISWQ VP + +H +PD+QRCFE E VTVW E Sbjct 13 VIGARWQLIAFAAPLLGVLGTISWQPRVPAVALHAEPDTQRCFEGEAAHVTVWGIEEQGP 72 Query 92 AAVELTVSALAGMQFEALESVSRRTTTVSAVAQRWGRYPIRARVAVVARGGLLMGAGTVD 151 AV LTV + GM+ + ES S TV A AQRWGRY + ARV V+ARGGLL G VD Sbjct 73 CAVRLTVPPVEGMELQVGESGSGHGKTVRATAQRWGRYHVAARVDVLARGGLLSGTALVD 132 Query 152 AAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVS 211 AAE++VFPLTPPQ TP+ +TELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNW VS Sbjct 133 AAEVIVFPLTPPQPTPILRTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWAVS 192 Query 212 ARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATEATERVVRGAAQVVQTALRNGDRAGI 271 ARR +LHVT+RLTDRAADVVVLID YRQPAGPAT ATER+VRGAAQVVQTALR+GDRAGI Sbjct 193 ARRRQLHVTQRLTDRAADVVVLIDGYRQPAGPATLATERIVRGAAQVVQTALRHGDRAGI 252 Query 272 VALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGFENTTGTLAPRAAVPAGAVVIAFSTLL 331 VALGGNRPRWLGADIGQRQFYRVLDTVL AG GFE+TTGTLAPRAAVPAGA+VIAFSTLL Sbjct 253 VALGGNRPRWLGADIGQRQFYRVLDTVLAAGAGFEHTTGTLAPRAAVPAGAIVIAFSTLL 312 Query 332 DTEFALALIDLRKRGHVVVAVDVLDSCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVL 391 DTEFALALIDLR+RGHVV+AVD+L+ P +D+ DPLV RMWALQRSAMYRDMAT+GVD++ Sbjct 313 DTEFALALIDLRRRGHVVLAVDILEGSPFEDEQDPLVDRMWALQRSAMYRDMATVGVDIV 372 Query 392 SWPADHSLQQSMGALPN 408 WP D L+QSMG LP+ Sbjct 373 WWPGDRGLEQSMGVLPD 389 >gi|118463519|ref|YP_883202.1| hypothetical protein MAV_4050 [Mycobacterium avium 104] gi|118164806|gb|ABK65703.1| conserved hypothetical protein [Mycobacterium avium 104] Length=371 Score = 550 bits (1417), Expect = 2e-154, Method: Compositional matrix adjust. Identities = 276/360 (77%), Positives = 308/360 (86%), Gaps = 0/360 (0%) Query 49 VLCSISWQRPVPVIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEA 108 +L +ISWQ VP + VH +PD+QRCFE E VTVW E AV LTV + GM+ + Sbjct 1 MLGTISWQPRVPAVAVHAEPDTQRCFEGEPAHVTVWGIEEQGPCAVRLTVPPVEGMELQF 60 Query 109 LESVSRRTTTVSAVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPL 168 ES SRR TV A AQRWGRY + ARV V+ARGGLL G VDAAE++VFPLTPPQ TP+ Sbjct 61 GESGSRRGKTVRATAQRWGRYHVAARVDVLARGGLLSGTALVDAAEVIVFPLTPPQPTPI 120 Query 169 PQTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAA 228 P+TELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNW VSARR +LHVT+RLTDRAA Sbjct 121 PRTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWAVSARRRQLHVTQRLTDRAA 180 Query 229 DVVVLIDMYRQPAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQ 288 DVVVLID YRQPAGPAT+ATER+VRGAAQVVQTALR+GDRAGIVALGGNRPRWLGADIGQ Sbjct 181 DVVVLIDGYRQPAGPATQATERIVRGAAQVVQTALRHGDRAGIVALGGNRPRWLGADIGQ 240 Query 289 RQFYRVLDTVLGAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHV 348 RQFYRVLDTVL AG GFE+TTGTLAPRAAVPAGA+VIAFSTLLDTEFALALIDLR+RGHV Sbjct 241 RQFYRVLDTVLAAGGGFEHTTGTLAPRAAVPAGAIVIAFSTLLDTEFALALIDLRRRGHV 300 Query 349 VVAVDVLDSCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPN 408 V+AVD+L+ P +D+ DPLV RMWALQRSAMYRDMAT+GVD++ WP D L+QSMG LP+ Sbjct 301 VLAVDILEGSPSEDEQDPLVDRMWALQRSAMYRDMATVGVDIVWWPGDRGLEQSMGVLPD 360 >gi|254233777|ref|ZP_04927102.1| hypothetical protein TBCG_03099 [Mycobacterium tuberculosis C] gi|124599306|gb|EAY58410.1| hypothetical protein TBCG_03099 [Mycobacterium tuberculosis C] Length=319 Score = 539 bits (1388), Expect = 4e-151, Method: Compositional matrix adjust. Identities = 292/317 (93%), Positives = 297/317 (94%), Gaps = 13/317 (4%) Query 1 VIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 +IQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP Sbjct 1 MIQTCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP 60 Query 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS 120 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS Sbjct 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS 120 Query 121 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH 180 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH Sbjct 121 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH 180 Query 181 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP 240 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP Sbjct 181 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP 240 Query 241 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG 300 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLG + +R + G Sbjct 241 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLG------RRHRAAPVLSG 294 Query 301 A-------GEGFENTTG 310 A G+ FENTTG Sbjct 295 ARHPCSAPGKVFENTTG 311 >gi|333990622|ref|YP_004523236.1| hypothetical protein JDM601_1982 [Mycobacterium sp. JDM601] gi|333486590|gb|AEF35982.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=425 Score = 535 bits (1379), Expect = 4e-150, Method: Compositional matrix adjust. Identities = 280/409 (69%), Positives = 318/409 (78%), Gaps = 4/409 (0%) Query 5 CEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQV 64 + EL W AS LT A+AT AG+AL AV A RWQLIAFAAPLLGVLCS+ WQ P+PV +V Sbjct 14 VDTELHWHASPLTQALATGAGLALVVAVGAARWQLIAFAAPLLGVLCSLGWQPPLPVFRV 73 Query 65 HGDPDSQRCFENEHVRVTV-WVTTESVDAAVELTVSALAGM-QFEALESVSRRTTTVSAV 122 P SQRCFE+E V +TV +A+ + VS M + ES SR T V+A Sbjct 74 GATPGSQRCFESEPVELTVRAAAAAGEASAIRVAVSTHPAMIRHSGAESGSR--TVVTAR 131 Query 123 AQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLT 182 A+RWGRYPI+A VA VARGGLL G TV+ E+ VFPL PPQ+TP+P +ELLDR+G HLT Sbjct 132 AERWGRYPIQATVAAVARGGLLAGTATVEVGEVTVFPLAPPQATPIPHSELLDRVGTHLT 191 Query 183 RHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAG 242 RH G GVEYADIRPY+PGD LR+VNW VSARRGRLHVT RLTDRAADVVVLID Y QP G Sbjct 192 RHPGRGVEYADIRPYIPGDPLRSVNWPVSARRGRLHVTERLTDRAADVVVLIDGYPQPRG 251 Query 243 PATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAG 302 PAT ATER V GAAQVVQTALRNGDRAG+V LGG +PRW+GADIGQRQFYR++D VLGAG Sbjct 252 PATAATERSVIGAAQVVQTALRNGDRAGVVTLGGRQPRWVGADIGQRQFYRIVDAVLGAG 311 Query 303 EGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQD 362 EGFE TTGTLAPRAAVP GA++IAFSTLLDTEFALAL DLRKRGHVV+AVDVL P ++ Sbjct 312 EGFEKTTGTLAPRAAVPPGALIIAFSTLLDTEFALALTDLRKRGHVVLAVDVLAGPPFEE 371 Query 363 QLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRR 411 DPLV R+W L+R+AMYRDMATIGVDV+SWP L+QSM R R Sbjct 372 DPDPLVSRIWMLERTAMYRDMATIGVDVVSWPPPQPLEQSMLLATQRHR 420 >gi|145221079|ref|YP_001131757.1| hypothetical protein Mflv_0475 [Mycobacterium gilvum PYR-GCK] gi|145213565|gb|ABP42969.1| protein of unknown function DUF58 [Mycobacterium gilvum PYR-GCK] Length=404 Score = 532 bits (1370), Expect = 5e-149, Method: Compositional matrix adjust. Identities = 270/406 (67%), Positives = 313/406 (78%), Gaps = 6/406 (1%) Query 7 VELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVHG 66 VELRWRAS LT +IATC A+ A+VAGRW+L+AFAAPL G LCSI WQR +P + V G Sbjct 4 VELRWRASALTQSIATCVAAAITVALVAGRWELVAFAAPLAGALCSIGWQRRLPTVTVTG 63 Query 67 DPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRW 126 P QRCFE+E V V + + AAV L +A A M R ++ + RW Sbjct 64 SPPFQRCFEDEQVSVGMTAVADD-GAAVTLDCTAPAPMVL-----THRPAGELTVQSSRW 117 Query 127 GRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVG 186 GRYP+RA V V RGGL+ G GTVDAAE+ VFPL P QST +P+T+LLDRLG HLTRH G Sbjct 118 GRYPVRAGVRVCGRGGLVTGTGTVDAAEVCVFPLAPAQSTAIPRTDLLDRLGTHLTRHTG 177 Query 187 PGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATE 246 PGVE+ADIRPYVPGDQLR VNW VSARRG LH+T RLTDRAADVVVL+D Y QP GPAT Sbjct 178 PGVEFADIRPYVPGDQLRIVNWPVSARRGTLHITERLTDRAADVVVLVDTYPQPPGPATA 237 Query 247 ATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGFE 306 ATER RGAAQVVQ+ALR GDRAG+VALGG RWLGADIG+RQFYR+LDTVLGA + FE Sbjct 238 ATERTARGAAQVVQSALRYGDRAGLVALGGRSTRWLGADIGRRQFYRILDTVLGADDTFE 297 Query 307 NTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQDQLDP 366 TGTLAPRAAVP GA+V+AFST+LDTEFALALIDLRKRGH VV VDVL+ P++ + DP Sbjct 298 KATGTLAPRAAVPTGAIVVAFSTMLDTEFALALIDLRKRGHPVVVVDVLEGSPVEGEHDP 357 Query 367 LVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRR 412 LV RMWA+QRS MYRDMAT+GVD+++WP D +L Q+M +P RRRR Sbjct 358 LVHRMWAMQRSFMYRDMATVGVDIVAWPGDATLDQAMALVPARRRR 403 >gi|120401209|ref|YP_951038.1| hypothetical protein Mvan_0181 [Mycobacterium vanbaalenii PYR-1] gi|119954027|gb|ABM11032.1| protein of unknown function DUF58 [Mycobacterium vanbaalenii PYR-1] Length=405 Score = 509 bits (1311), Expect = 3e-142, Method: Compositional matrix adjust. Identities = 275/406 (68%), Positives = 312/406 (77%), Gaps = 5/406 (1%) Query 7 VELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVHG 66 VELRWR S LT +IATCA A+ AA++AGRW+L AFAAPLLGVLCSI WQR P + V Sbjct 4 VELRWRPSPLTRSIATCAAAAIVAALLAGRWELAAFAAPLLGVLCSIGWQRGKPSVTVQA 63 Query 67 DPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRW 126 +P QRCFE E V VTV E +AV L S + GM+ S+ T+S A RW Sbjct 64 EPVFQRCFEGESVLVTVSAGAED-GSAVTLDCSVVTGMELVGPTSLP----TLSVRASRW 118 Query 127 GRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVG 186 GRYP+ A V V RGGLL G GT DAAE+ VFP+ PPQST +P+T+LLDRLG HLTRHVG Sbjct 119 GRYPLLATVRVGGRGGLLEGTGTADAAEVCVFPVAPPQSTAIPRTDLLDRLGTHLTRHVG 178 Query 187 PGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATE 246 PGVE+ADIRPYVPGDQLR VNW VSARRG LHVT RLTDRAADVV L+D Y QP GPAT Sbjct 179 PGVEFADIRPYVPGDQLRTVNWPVSARRGALHVTERLTDRAADVVALVDTYPQPPGPATA 238 Query 247 ATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGFE 306 ATER+ RGAAQVVQ+ALR GDRAG+VALG RWLGADIGQRQFYRVLDT+LGA + F+ Sbjct 239 ATERIARGAAQVVQSALRYGDRAGLVALGSRNVRWLGADIGQRQFYRVLDTMLGASDTFQ 298 Query 307 NTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQDQLDP 366 N TGTLAPR AVP A+VIAFST+LDTEFALALIDLRKRGH VVA+DVLD PL+ DP Sbjct 299 NATGTLAPRPAVPTRAIVIAFSTMLDTEFALALIDLRKRGHPVVAIDVLDGSPLEGDHDP 358 Query 367 LVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRR 412 LV RMW++QRS MYRDMAT+GVDV+ WPA +L Q+M +P R R Sbjct 359 LVHRMWSMQRSFMYRDMATVGVDVVGWPAAVTLDQAMALVPVHRAR 404 >gi|126432758|ref|YP_001068449.1| hypothetical protein Mjls_0145 [Mycobacterium sp. JLS] gi|126232558|gb|ABN95958.1| protein of unknown function DUF58 [Mycobacterium sp. JLS] Length=408 Score = 496 bits (1276), Expect = 4e-138, Method: Compositional matrix adjust. Identities = 260/408 (64%), Positives = 302/408 (75%), Gaps = 5/408 (1%) Query 6 EVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVH 65 +VEL WRAS L A+ATCA V LAAA+ RW+L+AF APLLGVLCS+ WQ P + V Sbjct 3 DVELHWRASPLARALATCAAVGLAAALFTMRWELVAFVAPLLGVLCSVGWQPRPPGVSVS 62 Query 66 GDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQR 125 QRCFE E V + + + V +T S L G + + TV+ A R Sbjct 63 TSTPLQRCFETEPSTVDIRAVADD-GSDVTMTPSTLDGADL--VTAADGTGATVTLTAAR 119 Query 126 WGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHV 185 WGRYP+RA V V RGGLL G G+VDAA + VFPL PQS +P+T+LLDRLG HLTRH+ Sbjct 120 WGRYPVRANVRVAGRGGLLEGTGSVDAAHVCVFPLAAPQSVTVPRTDLLDRLGTHLTRHL 179 Query 186 GPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPAT 245 GPGVEYADIR YVPGDQLR VNW VSARR LHVT+RLTDR+ADVVVL+D Y QP GPAT Sbjct 180 GPGVEYADIRGYVPGDQLRTVNWSVSARRRSLHVTQRLTDRSADVVVLVDTYAQPPGPAT 239 Query 246 EATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGF 305 ATER+ RGA QVVQ+ALR GDRAG+V LG R RWLGADIGQRQFYR+LD +L AGE F Sbjct 240 AATERIARGAVQVVQSALRYGDRAGLVTLGSRRTRWLGADIGQRQFYRILDVMLAAGE-F 298 Query 306 ENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQDQLD 365 + TTG+LAP+AAVP GA+V+AFST+L+TEFALALIDLRKRGH V+AVDVL+ PL D Sbjct 299 DATTGSLAPQAAVPPGAIVVAFSTMLETEFALALIDLRKRGHTVIAVDVLEGSPLDGDRD 358 Query 366 PLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRG 413 PL+ RMWALQRS MYRDM TIGVDV+ WPAD +L Q+M AL RR G Sbjct 359 PLIDRMWALQRSFMYRDMGTIGVDVVPWPADATLDQAM-ALTRHRRTG 405 >gi|108797135|ref|YP_637332.1| hypothetical protein Mmcs_0155 [Mycobacterium sp. MCS] gi|119866220|ref|YP_936172.1| hypothetical protein Mkms_0164 [Mycobacterium sp. KMS] gi|108767554|gb|ABG06276.1| protein of unknown function DUF58 [Mycobacterium sp. MCS] gi|119692309|gb|ABL89382.1| protein of unknown function DUF58 [Mycobacterium sp. KMS] Length=408 Score = 494 bits (1272), Expect = 1e-137, Method: Compositional matrix adjust. Identities = 258/408 (64%), Positives = 302/408 (75%), Gaps = 5/408 (1%) Query 6 EVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVH 65 +VEL WRAS L A+ATCA V LAAA+ RW+L+AF AP+LGVLCS+ WQ P + V Sbjct 3 DVELHWRASPLARALATCAAVGLAAALFTLRWELVAFVAPMLGVLCSVGWQPRPPGVSVS 62 Query 66 GDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQR 125 QRCFE E V + + + V +T S L G + T T++A R Sbjct 63 TSTPLQRCFETEPSTVDIRAVADD-GSDVTMTPSTLDGADLATAADGTGATVTLTAA--R 119 Query 126 WGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHV 185 WGRYP+RA V V RGGLL G G+VDAA + VFPL PQS +P+T+LLDRLG HLTRH+ Sbjct 120 WGRYPVRANVRVAGRGGLLEGTGSVDAAHVCVFPLAAPQSVSVPRTDLLDRLGTHLTRHI 179 Query 186 GPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPAT 245 GPGVEYADIR YVPGD LR VNW VSARR LHVT+RLTDR+ADVVVL+D Y QP GPAT Sbjct 180 GPGVEYADIRGYVPGDHLRTVNWSVSARRRSLHVTQRLTDRSADVVVLVDTYAQPPGPAT 239 Query 246 EATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGF 305 ATER+ RGA QVVQ+ALR GDRAG+V LG R RWLGADIGQRQFYR+LD +L AG+ F Sbjct 240 AATERIARGAVQVVQSALRYGDRAGLVTLGSRRTRWLGADIGQRQFYRILDVLLAAGD-F 298 Query 306 ENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQDQLD 365 + TTG+LAP+AAVP GA+V+AFST+L+TEFALALIDLRKRGH V+AVDVL+ PL D Sbjct 299 DATTGSLAPQAAVPPGAIVVAFSTMLETEFALALIDLRKRGHTVIAVDVLEGSPLDGDRD 358 Query 366 PLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRG 413 PL+ RMWALQRS MYRDM TIGVDV+SWPAD +L Q+M AL RR G Sbjct 359 PLIDRMWALQRSFMYRDMGTIGVDVVSWPADATLDQAM-ALTRHRRTG 405 >gi|41409315|ref|NP_962151.1| hypothetical protein MAP3217c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398135|gb|AAS05765.1| hypothetical protein MAP_3217c [Mycobacterium avium subsp. paratuberculosis K-10] Length=383 Score = 489 bits (1260), Expect = 3e-136, Method: Compositional matrix adjust. Identities = 248/310 (80%), Positives = 271/310 (88%), Gaps = 0/310 (0%) Query 99 SALAGMQFEALESVSRRTTTVSAVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVF 158 SA G ES S TV A AQRWGRY + ARV V+ARGGLL G VDAAE++VF Sbjct 63 SARRGNGTAGGESGSGHGKTVRATAQRWGRYHVAARVDVLARGGLLSGTALVDAAEVIVF 122 Query 159 PLTPPQSTPLPQTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLH 218 PLTPPQ TP+P+TELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNW VSARR +LH Sbjct 123 PLTPPQPTPIPRTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWAVSARRRQLH 182 Query 219 VTRRLTDRAADVVVLIDMYRQPAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNR 278 VT+RLTDRAADVVVLID YRQPAGPAT ATER+VRGAAQVVQTALR+GDRAGIVALGGNR Sbjct 183 VTQRLTDRAADVVVLIDGYRQPAGPATLATERIVRGAAQVVQTALRHGDRAGIVALGGNR 242 Query 279 PRWLGADIGQRQFYRVLDTVLGAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALA 338 PRWLGADIGQRQFYRVLDTVL AG GFE+TTGTLAPRAAVPAGA+VIAFSTLLDTEFALA Sbjct 243 PRWLGADIGQRQFYRVLDTVLAAGAGFEHTTGTLAPRAAVPAGAIVIAFSTLLDTEFALA 302 Query 339 LIDLRKRGHVVVAVDVLDSCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHS 398 LIDLR+RGHVV+AVD+L+ P +D+ DPLV RMWALQRSAMYRDMAT+GVD++ WP D Sbjct 303 LIDLRRRGHVVLAVDILEGSPFEDEQDPLVDRMWALQRSAMYRDMATVGVDIVWWPGDRG 362 Query 399 LQQSMGALPN 408 L+QSMG LP+ Sbjct 363 LEQSMGVLPD 372 >gi|118471031|ref|YP_888158.1| ATPase AAA [Mycobacterium smegmatis str. MC2 155] gi|118172318|gb|ABK73214.1| ATPase family protein associated with various cellular activities (AAA) [Mycobacterium smegmatis str. MC2 155] Length=739 Score = 479 bits (1232), Expect = 4e-133, Method: Compositional matrix adjust. Identities = 258/409 (64%), Positives = 305/409 (75%), Gaps = 4/409 (0%) Query 6 EVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVH 65 V LRW AS LT ++AT A A+ AV+ RWQL+ FA+PLLGVLCS WQRP ++V Sbjct 330 HVPLRWGASPLTKSVATAAAGAMLIAVLGFRWQLVIFASPLLGVLCSAYWQRPRVSVEVG 389 Query 66 GDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQR 125 +P + RCFENE ++V V++ S A L V ++ G++ E + V A A R Sbjct 390 AEPATVRCFENESAELSVRVSS-SAGADARLRVDSVEGLRLEPGDRAGPEQR-VRANASR 447 Query 126 WGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHV 185 WGRYP+RA V V A GGL+ G GTV+AAE+ VFPL P TP+P+ EL DRLG HLTRH Sbjct 448 WGRYPLRAHVTVTAPGGLVTGTGTVEAAELYVFPLAAPHLTPMPRAELPDRLGTHLTRHT 507 Query 186 GPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPAT 245 GPGVEYAD+RPYVPGD LR VNW VSARRGRLHVT RLTDR DVVVLID + Q GPAT Sbjct 508 GPGVEYADVRPYVPGDHLRTVNWPVSARRGRLHVTERLTDRGGDVVVLIDTHDQAPGPAT 567 Query 246 EATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGF 305 +ATER RGAAQVVQ+ALR+GDRAGIVALGG +PRWLG DIG+RQFYRVLD +LGAG GF Sbjct 568 QATERTARGAAQVVQSALRSGDRAGIVALGGRQPRWLGLDIGRRQFYRVLDAILGAGGGF 627 Query 306 ENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQ--DQ 363 E TTGTLAPRAAVP GA+V+AFST+L+TEFA ALI+L K GH VVAVD+L+ P D Sbjct 628 ETTTGTLAPRAAVPPGAIVVAFSTMLNTEFAFALIELAKHGHAVVAVDILEGAPFDNPDG 687 Query 364 LDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRR 412 LDPL+ R+WALQRSAMYRDM+TIG+DV+ W D LQ M +P+R RR Sbjct 688 LDPLIPRLWALQRSAMYRDMSTIGIDVVHWRGDIPLQDVMRLIPDRHRR 736 >gi|54022424|ref|YP_116666.1| hypothetical protein nfa4600 [Nocardia farcinica IFM 10152] gi|54013932|dbj|BAD55302.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=424 Score = 398 bits (1023), Expect = 8e-109, Method: Compositional matrix adjust. Identities = 234/417 (57%), Positives = 281/417 (68%), Gaps = 6/417 (1%) Query 4 TCEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQ 63 T E ELRW+ + L +A CA VAL AAVV RWQ + FAAPLLGVL + WQR I+ Sbjct 9 TVEAELRWQPAPLVYMLAGCAAVALLAAVVFARWQPMVFAAPLLGVLATAPWQRSPTRIE 68 Query 64 VHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTT----V 119 V G +QRCFE E V TV ES A + +T + G+ E+ + Sbjct 69 VDGG-GTQRCFETEEVVCTVAAFVESGHALLRITPEPVPGLDVTIEETSDSGAAPAGLRL 127 Query 120 SAVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGA 179 + A RWGRYP+ RV+ ++ GL + + A E+ V+P+T PQ +P+TEL +RLG Sbjct 128 ALSASRWGRYPLSVRVSALSPAGLAVATEILPAGELFVYPVTDPQLMRMPRTELPERLGT 187 Query 180 HLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQ 239 HLTR GPGVEYADIR Y PGDQLR VNW VSARRGRL+VT RLT+R+ADVVVLID Q Sbjct 188 HLTRRHGPGVEYADIRAYTPGDQLRTVNWPVSARRGRLYVTERLTNRSADVVVLIDTSLQ 247 Query 240 PAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVL 299 GPA++A E VRGAAQVVQ+ L GDR +V LG +PRWL DIG+RQFYR++DTVL Sbjct 248 APGPASDALELSVRGAAQVVQSTLSAGDRTAVVCLG-EQPRWLRPDIGRRQFYRIVDTVL 306 Query 300 GAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCP 359 G+ TTGTLAP AAVP GA+V+AFSTLLDT+FALALIDLRKRGHVVV VDVL P Sbjct 307 AVGDEHIPTTGTLAPHAAVPLGAIVVAFSTLLDTQFALALIDLRKRGHVVVVVDVLRGTP 366 Query 360 LQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRGR 416 +D LDP + RMW L+R+ MYRDMA IGVD++ WP D L Q M LP RR R R Sbjct 367 FRDGLDPTLARMWHLERATMYRDMAAIGVDIVPWPEDVRLDQVMRLLPEHRRSTRVR 423 >gi|169628996|ref|YP_001702645.1| hypothetical protein MAB_1908c [Mycobacterium abscessus ATCC 19977] gi|169240963|emb|CAM61991.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=409 Score = 374 bits (960), Expect = 2e-101, Method: Compositional matrix adjust. Identities = 211/396 (54%), Positives = 263/396 (67%), Gaps = 2/396 (0%) Query 9 LRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVHGDP 68 + WRAS L A+A C G ALA AV+ GRWQL+ FAAP +G L S + P V +P Sbjct 2 ITWRASALISALAACTGAALALAVMTGRWQLVVFAAPFVGALAGASRRPPAARAWVTDEP 61 Query 69 DSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRWGR 128 + RC E+E + V V V + L + + G++ +A + T+ AQRWGR Sbjct 62 EPLRCLESETITVAVSVESTGPAVVCGLRPALVEGLRIDADRPAAPNQLTMRTSAQRWGR 121 Query 129 YPIRARVAVVARGGLLMG-AGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVGP 187 Y + V V+ GL G A T+ A+E+ V+PL PQ LP +L DR+G LTRH GP Sbjct 122 YRVPVEVRSVSASGLWAGTALTLPASELRVYPLADPQDVALPPADLPDRIGTRLTRHHGP 181 Query 188 GVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATEA 247 GVEYADIR YVPGD LR VNW VSA+RGRLHVT RLTDRAADVVVLID Y QP+GPAT A Sbjct 182 GVEYADIREYVPGDSLRTVNWRVSAQRGRLHVTDRLTDRAADVVVLIDTYPQPSGPATTA 241 Query 248 TERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGFEN 307 TER RGAAQ+VQ+ L+ GDRAG+V LG + RWL +IG+ QFYR+LD L AGE + Sbjct 242 TERSARGAAQLVQSVLQRGDRAGVVVLGSS-ARWLAPNIGRHQFYRLLDATLDAGEWHSH 300 Query 308 TTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQDQLDPL 367 + LAPRAAVP A+V+AFSTLL+ +F LAL DLR+RGH VV VDVLD P +++ DP+ Sbjct 301 SASALAPRAAVPPNAIVVAFSTLLNADFGLALTDLRRRGHPVVVVDVLDRLPFREEPDPI 360 Query 368 VVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSM 403 V R W L+RS MYR++A GVDV+ W D L +M Sbjct 361 VARWWRLERSRMYRNIAVTGVDVVGWSHDSGLNHAM 396 >gi|333918362|ref|YP_004491943.1| hypothetical protein AS9A_0689 [Amycolicicoccus subflavus DQS3-9A1] gi|333480583|gb|AEF39143.1| Conserved hypothetical membrane protein [Amycolicicoccus subflavus DQS3-9A1] Length=419 Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 199/405 (50%), Positives = 253/405 (63%), Gaps = 14/405 (3%) Query 7 VELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQ------RPVP 60 EL+WR S+L + +A CAG AL AA++A QL+ FA+P LG L + +W +P Sbjct 3 TELQWRPSRLAILLALCAGSALIAALIAHDPQLVLFASPFLGALSAGAWAAQRTRWQPPA 62 Query 61 VIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVS 120 + +P R FENE ++ + T A L A G+ L R+ T Sbjct 63 SATIAAEPALSRTFENESTTLSCYGTLAGGAAIYTLKPVAAPGLDLGQL----RKDGTFD 118 Query 121 AVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAH 180 A A RWG YP++ V A GGLL V AA I +PL PP TP+P+T L DR+G H Sbjct 119 ASATRWGNYPVQVEVDATALGGLLSAKAAVTAARIHAYPLAPPYQTPIPRTRLPDRIGTH 178 Query 181 LTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP 240 LTR G GVEYAD R Y+ GD L +NW VSAR GRLH+T R TDRAADVV +ID Y Sbjct 179 LTRRHGSGVEYADTRTYLAGDPLHTINWKVSARTGRLHITERFTDRAADVVAIIDTYPHA 238 Query 241 AGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG 300 GPA+++ +R VRGAAQV Q AL+ GDRAG++AL G+R RWLGA++G+RQFYR+LD VL Sbjct 239 PGPASDSLDRAVRGAAQVTQAALQRGDRAGVIAL-GSRARWLGAELGRRQFYRILDAVLA 297 Query 301 AGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSC-P 359 AG+ GTLAP AVP GA+VI FS LL+T+F+LA+IDLR+ GH VV VDVL P Sbjct 298 AGDDHHLIRGTLAPVDAVPRGAIVIGFSPLLETQFSLAMIDLRRHGHAVVLVDVLGEVPP 357 Query 360 LQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMG 404 + LD + RMW ++R RD+ TIG+DVL W H+ Q MG Sbjct 358 FSETLDDISERMWRVERRNQARDLRTIGIDVLEW--RHAEQADMG 400 >gi|111021500|ref|YP_704472.1| hypothetical protein RHA1_ro04528 [Rhodococcus jostii RHA1] gi|110821030|gb|ABG96314.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=407 Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 212/390 (55%), Positives = 257/390 (66%), Gaps = 9/390 (2%) Query 5 CEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISW-QRPVPVIQ 63 E L WRAS LA+ TCA VAL A VV W+LI FAAP+LG L ++ W RP ++ Sbjct 2 TEHRLTWRASPAALALTTCAAVALTAGVVGRWWELIVFAAPMLGALGTVMWLPRPATGVR 61 Query 64 VHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVA 123 V RCFE+E V +V VT + D A +L V+ + +E V VSA Sbjct 62 VEVSARMLRCFESESVHFSVDVT--ACDGAAQLAVAPTPSDGY-TVEQVGDGDYVVSA-- 116 Query 124 QRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTR 183 RWGRY V A GGLL + V AE+ VFPL PP TPLP L DR+GAH TR Sbjct 117 DRWGRYEPALTVTARAGGGLLTASLPVPVAELRVFPLAPPMPTPLPHATLPDRIGAHRTR 176 Query 184 HVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGP 243 G GVE+ DIRP+ PGD LR+VNW VSARRGRLHVT R+ DRAADVV ++D Q GP Sbjct 177 RFGSGVEFGDIRPHAPGDPLRSVNWPVSARRGRLHVTERIMDRAADVVAVLDTTPQAPGP 236 Query 244 ATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGE 303 A+E+ R VRGA QVVQTAL+ GDRAG+V + G R RWLGADIG+RQFYR+LDTVL + Sbjct 237 ASESLHRTVRGATQVVQTALQRGDRAGVV-VHGLRLRWLGADIGRRQFYRILDTVLDSDA 295 Query 304 GFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQDQ 363 G GTL PR A+P AVVIAFST+LDT FAL+L++LR+RGHVVVAVDVL P + + Sbjct 296 G--AAEGTLVPRVALPPRAVVIAFSTMLDTNFALSLLELRRRGHVVVAVDVLRGPPFEYE 353 Query 364 LDPLVVRMWALQRSAMYRDMATIGVDVLSW 393 LD + RMW L+R MYR+M +GV V++W Sbjct 354 LDAMTGRMWRLERRNMYRNMGVLGVPVVAW 383 >gi|226363853|ref|YP_002781635.1| hypothetical protein ROP_44430 [Rhodococcus opacus B4] gi|226242342|dbj|BAH52690.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=414 Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 219/417 (53%), Positives = 268/417 (65%), Gaps = 13/417 (3%) Query 5 CEVELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISW-QRPVPVIQ 63 E L WRAS LA+ TCA VAL AAVV W+L+AFAAP+LG L ++ W RP ++ Sbjct 2 TEHPLTWRASPAALALTTCAAVALTAAVVGRWWELMAFAAPMLGALGALRWLPRPATRVR 61 Query 64 VHGDPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVA 123 V D RCFE+E R +V V + A EL V+ + +E +SA Sbjct 62 VETSGDVLRCFESESARFSVDV--RACGGAAELAVTPAPSDSY-TVEQAGDGEYLLSA-- 116 Query 124 QRWGRYPIRARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTR 183 RWGRY V A GGLL V E+ +FPL PP TPLP L DR+GAH TR Sbjct 117 DRWGRYDPALIVTARAGGGLLTATARVPVTELRIFPLAPPMPTPLPHAPLPDRIGAHSTR 176 Query 184 HVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGP 243 G GVE+ DIRP+ PGD LR+VNW VSARRGRLHVT R+ DRAADVV ++D Q GP Sbjct 177 RFGSGVEFGDIRPHAPGDPLRSVNWPVSARRGRLHVTERIMDRAADVVAVLDTTPQAPGP 236 Query 244 ATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAG- 302 A+E+ +R VRGA QVVQ AL+ GDRAG+VA G R RWLGADIG+RQFYR+LDTVL AG Sbjct 237 ASESLQRTVRGATQVVQAALQRGDRAGVVA-HGLRLRWLGADIGRRQFYRILDTVLDAGG 295 Query 303 ----EGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSC 358 E GTL PR A+P AVVIAFST+LDT FAL+L++LR+RGHVVVAVDVL Sbjct 296 TSVHEVGGAAEGTLVPRVALPPRAVVIAFSTMLDTGFALSLLELRRRGHVVVAVDVLRGP 355 Query 359 PLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRGRG 415 P + +LDP+ RMW L+R MYR+M +GV V++W D +L ++ L +R RR G Sbjct 356 PFEHELDPMTGRMWRLERRNMYRNMGVLGVPVVAWDDDSALDLAL-TLADRGRRPSG 411 >gi|256392261|ref|YP_003113825.1| hypothetical protein Caci_3075 [Catenulispora acidiphila DSM 44928] gi|256358487|gb|ACU71984.1| protein of unknown function DUF58 [Catenulispora acidiphila DSM 44928] Length=520 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 143/435 (33%), Positives = 200/435 (46%), Gaps = 32/435 (7%) Query 11 WRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVPVIQVHGDPDS 70 WR +Q + T A AL AV G W + AA L +L + P ++ D Sbjct 89 WRPTQRAARLLTAAICALIPAVAFGAWWCVPLAAVPLLMLTAHGGSHPK-RVRAEVDVPE 147 Query 71 QRCFENEHVRVTV---------WVTTESVDAAV----ELTVSALAGMQFEALESVSRRTT 117 +RCFE E + T+ W E + E S +G++ E+LE ++ Sbjct 148 RRCFEGETLIATIRLAADGAAGWTRQEYLPPRSRDDHEAGTSTPSGIRLESLE-LTGSVI 206 Query 118 TVSAVAQRWGRYPIRA-RVAVVARGGLLMGAGTVDAAEIVVFPLTPPQSTPLPQTELLDR 176 TV + RWGR+ + A + V GL + + D E+ FP+ P T L DR Sbjct 207 TVKLLVPRWGRWALGAVAIDVHDTAGLRLTSLHADLGEVEAFPVPAPDDTTLAPIRFPDR 266 Query 177 LGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDM 236 G H R G GVE+ +RPYV GD+ R +NW + RR L V +RAA+ VV++D Sbjct 267 FGEHSARTPGEGVEFIQVRPYVFGDRQRRINWSATTRRRELQVNTFEAERAAEAVVVVDA 326 Query 237 YR---QPAGPATE----ATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQR 289 QP P + + VRGAA + Q L DR G+V L G R +WL G Sbjct 327 LSDLPQPPDPDNDRPRSTLDTAVRGAAGLAQAYLTAHDRIGLVTLSG-RVQWLTPGSGNA 385 Query 290 QFYRVLDTVLGAGEGFENTTGTLA--PRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGH 347 YR+ TV+ + F TG L+ P +P GA+V FS LLD A+ DL RGH Sbjct 386 HLYRIAQTVMDLRKDFTYETGGLSRLPTRVLPRGALVYVFSPLLDPGVVEAISDLSDRGH 445 Query 348 VVVAVDVLDSCPL------QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQ 401 +V +DVL P D LD L +R+W L R A+ + +GV V++W L Sbjct 446 PLVVIDVLAHEPAPATAAKPDHLDALALRLWRLDRQAVRFVLGELGVPVVTWDGLDPLDL 505 Query 402 SMGALPNRRRRGRGR 416 ++ L GR R Sbjct 506 ALAPLRQAPLAGRAR 520 >gi|329934283|ref|ZP_08284362.1| hypothetical protein SGM_0074 [Streptomyces griseoaurantiacus M045] gi|329305879|gb|EGG49734.1| hypothetical protein SGM_0074 [Streptomyces griseoaurantiacus M045] Length=443 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 136/413 (33%), Positives = 200/413 (49%), Gaps = 15/413 (3%) Query 12 RASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSISWQRPVP-VIQVHGDPDS 70 RA + L + T A + AAA++ G ++A AAP L +L P P + + Sbjct 32 RAGERALRLGTLAVLGCAAALITGHSWVLALAAPPLVLLALALPNGPRPGTVTARAVVEP 91 Query 71 QRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRWGRYP 130 +RCFE E V V + V+ E V+ V+ G++ + L R V AQRWGR+ Sbjct 92 RRCFEGERVAVRIEVSYEGGTGRVDPGVALGHGIRLDHLAVGPHRVELV-MTAQRWGRWA 150 Query 131 I-RARVAVVARGGLLMGAGTVDAAEIVVFPLTPPQS--TPLPQTELLDRLGAHLTRHVGP 187 + V V GGL VD EI VFPL P + TP+P L RLG H G Sbjct 151 LGTVDVDVYDLGGLARRTVRVDLGEIAVFPL-PGHAGLTPVP-VRLPQRLGEHTAAQRGE 208 Query 188 GVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATEA 247 GVE + PYV G++ R ++W + RRG L V + +RAAD VVL+D+ P T A Sbjct 209 GVEVTGVHPYVRGERQRRIHWPATTRRGTLQVHQFAAERAADTVVLLDVLADVVDPVTGA 268 Query 248 T--ERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG--AGE 303 + + +R AA +V+ LR DR G+V++GG RWL GQ FYR++++VL Sbjct 269 SSLDETLRAAAGLVRAYLRTHDRVGVVSVGGA-TRWLQPGSGQGYFYRIVESVLEVRKDR 327 Query 304 GFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPLQ-- 361 + + P A+P GA+V + L D L +R R + +V V++ P+ Sbjct 328 AYRSEGLDRLPPPALPRGALVYVLTPLADQRILGILHQVRGRANPMVVVEIPAGEPVPEP 387 Query 362 -DQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNRRRRG 413 D D L +R+W R AM + G+ V++ +L ++ L R G Sbjct 388 GDTEDELALRLWRADRDAMRFALVEHGIAVVAHRPGRTLDLALAPLLRTRVHG 440 >gi|21224460|ref|NP_630239.1| hypothetical protein SCO6133 [Streptomyces coelicolor A3(2)] gi|4160329|emb|CAA22800.1| putative membrane protein [Streptomyces coelicolor A3(2)] Length=460 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 109/329 (34%), Positives = 164/329 (50%), Gaps = 12/329 (3%) Query 72 RCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRWGRYPI 131 RCFE + V V + + + ++ V+ G++ + + V T T+ A WGR+ + Sbjct 108 RCFEGDTVTVRIALAHDGEAVRLDPGVTLGPGLRLDEV-VVGPSTVTLRHTALHWGRWSL 166 Query 132 R-ARVAVVARGGLLMGAGTVDAAEIVVFP-LTPPQSTPLPQTELLDRLGAHLTRHVGPGV 189 V V GG + V+AAE+ VFP T + TP+P L RLG H + G GV Sbjct 167 GPVDVDVYDPGGTVRRTVRVEAAEVSVFPRATQARFTPIP-VRLPQRLGEHASPQSGEGV 225 Query 190 EYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPAT--EA 247 E + P+VPG++ R ++W + RRG + + R +RAAD V+L+D + P T + Sbjct 226 EVIGVGPWVPGERQRRIHWPSTTRRGAVQLHRFAAERAADTVMLVDAFGDVVDPVTGLSS 285 Query 248 TERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG--AGEGF 305 + VR AA + + LR DR G+V+ GG RWL G FYR++++VL GF Sbjct 286 LDETVRAAAGLARAYLRTHDRVGVVSTGGTT-RWLAPGTGDAAFYRIVESVLDVRKDRGF 344 Query 306 ENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPL---QD 362 P A+P GA+V F+ L D L DL+ RG V V++ P+ D Sbjct 345 GGDGLERVPSPALPEGALVYVFTPLSDARILQVLRDLQARGRRPVVVEIPSGDPVVEPGD 404 Query 363 QLDPLVVRMWALQRSAMYRDMATIGVDVL 391 + L +R+W +R AM + GV VL Sbjct 405 EAGGLGLRLWRAERDAMRFALRDSGVPVL 433 >gi|289768226|ref|ZP_06527604.1| ATPase [Streptomyces lividans TK24] gi|289698425|gb|EFD65854.1| ATPase [Streptomyces lividans TK24] Length=792 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 109/329 (34%), Positives = 164/329 (50%), Gaps = 12/329 (3%) Query 72 RCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRWGRYPI 131 RCFE + V V + + + ++ V+ G++ + + V T T+ A WGR+ + Sbjct 440 RCFEGDTVTVRIALAHDGEAVRLDPGVTLGPGLRLDEV-VVGPSTVTLRHTALHWGRWSL 498 Query 132 -RARVAVVARGGLLMGAGTVDAAEIVVFP-LTPPQSTPLPQTELLDRLGAHLTRHVGPGV 189 V V GG + V+AAE+ VFP T + TP+P L RLG H + G GV Sbjct 499 GPVDVDVYDPGGTVRRTVRVEAAEVSVFPRATQARFTPIP-VRLPQRLGEHASPQSGEGV 557 Query 190 EYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPAT--EA 247 E + P+VPG++ R ++W + RRG + + R +RAAD V+L+D + P T + Sbjct 558 EVIGVGPWVPGERQRRIHWPSTTRRGAVQLHRFAAERAADTVMLVDAFGDVVDPVTGLSS 617 Query 248 TERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG--AGEGF 305 + VR AA + + LR DR G+V+ GG RWL G FYR++++VL GF Sbjct 618 LDETVRAAAGLARAYLRTHDRVGVVSTGGTT-RWLAPGTGDAAFYRIVESVLDVRKDRGF 676 Query 306 ENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPL---QD 362 P A+P GA+V F+ L D L DL+ RG V V++ P+ D Sbjct 677 GGDGLERVPSPALPEGALVYVFTPLSDARILQVLRDLQARGRRPVVVEIPSGDPVVEPGD 736 Query 363 QLDPLVVRMWALQRSAMYRDMATIGVDVL 391 + L +R+W +R AM + GV VL Sbjct 737 EAGGLGLRLWRAERDAMRFALRDSGVPVL 765 >gi|291299108|ref|YP_003510386.1| hypothetical protein Snas_1590 [Stackebrandtia nassauensis DSM 44728] gi|290568328|gb|ADD41293.1| protein of unknown function DUF58 [Stackebrandtia nassauensis DSM 44728] Length=429 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 131/420 (32%), Positives = 181/420 (44%), Gaps = 32/420 (7%) Query 11 WRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPL-LGVLCSISWQRPVPVIQVHGDPD 69 WR + T VAL AAV GR L+ A PL LGVL SI W RP Sbjct 6 WRPTGALRRSVTIVAVALLAAVGMGRVDLVVLATPLALGVLASI-WVRPRVAPSAEIVVA 64 Query 70 SQRCFENEHVRVTVWVTTESVDAAVELTVSAL-----------AGMQFEALESVSRRTTT 118 R E + WV + D ++V A G A+ + T + Sbjct 65 EDRVPETDEF--NAWVRVANPDPVPTVSVVATREPAWLRLRHGVGFYVRAVAANGEATVS 122 Query 119 VSAVAQRWGRYPI-RARVAVVARGGLLMGAG-TVDAAEIVVFPLTPPQSTPLPQTELLDR 176 + VA+RWGR+ I A V A GLL A + A I V+P + Sbjct 123 LRGVARRWGRHEIGPALVRSYACDGLLRTADLMLPARGIRVYPTADVFDSRQELPRAAGM 182 Query 177 LGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDM 236 G H TR G G E A++RP+ PGD+LR ++W VS RR +V L++R A+VV++ID+ Sbjct 183 TGIHRTRRHGDGGELAEVRPFQPGDRLRRIDWRVSLRRREPYVNSTLSERDAEVVIVIDV 242 Query 237 YRQPAGPA-TEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVL 295 + P T + VR AA + + R GDR +V G R L G+RQF VL Sbjct 243 LHEAGNPGETSILDVTVRAAAAIAEHYTRQGDRVSVVEFGSGLRR-LRPGTGRRQFRAVL 301 Query 296 D------TVLGAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVV 349 + LG G E LA +P G+VVI + L+D + L L + G + Sbjct 302 EWLTDTRVTLGPYAGAER----LASGGYLPFGSVVIMLTPLIDEQSTELLARLTRSGRTL 357 Query 350 VAVDVLDSC---PLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGAL 406 V VD L P + + R+W +R + +GV V W SL +G + Sbjct 358 VTVDTLPDALRPPHRSPWSGIAARLWRQERRNTVDRLRELGVPVERWRGPGSLDLMLGDI 417 >gi|254173304|ref|ZP_04879977.1| conserved hypothetical protein [Thermococcus sp. AM4] gi|214032713|gb|EEB73542.1| conserved hypothetical protein [Thermococcus sp. AM4] Length=414 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 108/415 (27%), Positives = 184/415 (45%), Gaps = 31/415 (7%) Query 8 ELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVL-CSISWQRPVPVIQVHG 66 EL RA++ LA+ + L +A RW+L+ P+L V SI + RP ++V Sbjct 8 ELTERAAETLLAM----WLILISAFFFLRWELVYLILPVLWVFFVSIFFFRPEIKLEVKR 63 Query 67 DPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRW 126 + R E E + + + + + ++++ G+ E +E ++ +R Sbjct 64 EIPHDRMLEGETAEIKLRIKSNARIPSLKIEEDIPEGL--ELIEGSREHVLSLGTDEERT 121 Query 127 GRYPIRARVAVVARGGLL------MGAGTVD-----AAEIVVFPLTPPQSTPLPQTELLD 175 Y +R R + G+ MG +D E++ PL TP Sbjct 122 ITYKVRVRRGIHEFNGVRISYRDPMGFFKLDHFIEHYTELIGMPLIEDVPTPYSTRGTKI 181 Query 176 RLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLID 235 G + +G GVE+ IR Y PGD L+ +NW +A+ G++ ++R DVV ++D Sbjct 182 TAGPLPSPRIGEGVEFHAIREYQPGDPLKIINWKATAKTGKIMANEYESERKVDVVFIVD 241 Query 236 -MYRQPAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRV 294 YR + +VR AA ++ AL NG G++ L P W+ D G+R F++ Sbjct 242 ASYR-----GGRVFDYIVRAAASLMLNALHNGTSFGLL-LAEAVPLWVRVDYGKRHFFKC 295 Query 295 LDTVLGAGEGFENTTGTLAP---RAAVPAGAVVIAFSTLLDTEFALALIDLRKRGH--VV 349 +D + A N R+ PA A ++ FSTLL E AL + G+ +V Sbjct 296 IDFLSTAKPDRNNMIAYQVEHLIRSRFPARAQLLYFSTLLTEESREALRTMSAYGYKVIV 355 Query 350 VAVDVLDSCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMG 404 ++ D + + + L VR+ L+R A R MAT G+ ++ W L+ ++ Sbjct 356 ISPDPYSLVEPKTKEEELAVRILRLKRKAQLRKMATHGI-IIDWDVKKPLKAAIA 409 >gi|240102247|ref|YP_002958555.1| MoxR associated protein, containing DUF58 and Von Willebrand factor, type A domains [Thermococcus gammatolerans EJ3] gi|239909800|gb|ACS32691.1| MoxR associated protein, containing DUF58 and Von Willebrand factor, type A domains [Thermococcus gammatolerans EJ3] Length=414 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 109/415 (27%), Positives = 184/415 (45%), Gaps = 31/415 (7%) Query 8 ELRWRASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVL-CSISWQRPVPVIQVHG 66 EL RA++ LA+ + L +A RW+L P+L V SI + RP ++V Sbjct 8 ELTERAAETLLAM----WLILISAFFFLRWELAYLILPILWVFFVSIFFFRPEIKLEVRR 63 Query 67 DPDSQRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRW 126 + R E E + + V + + ++++ G+ E +E ++ +R Sbjct 64 EIPHDRMLEGEVAEIRLRVKSNARIPSLKIEEDIPDGL--ELVEGSREHVLSLGKDEERV 121 Query 127 GRYPIRARVAVVARGGLL------MGAGTVD-----AAEIVVFPLTPPQSTPLPQTELLD 175 +Y +R R + G+ MG +D E++ PL TP Sbjct 122 IKYRVRVRRGIHEFNGVRVSYRDPMGFFKLDHFIEHYTELIGMPLIEDVPTPYSTRGTKI 181 Query 176 RLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLID 235 G + +G GVE+ IR Y PGD L+ +NW +A+ G++ ++R DV+ ++D Sbjct 182 TAGPLPSPRIGEGVEFHAIREYQPGDPLKIINWKATAKTGKIMANEYESERKVDVIFIVD 241 Query 236 -MYRQPAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRV 294 YR + +VR AA ++ AL NG G++ L P W+ D G+R F++ Sbjct 242 ASYR-----GRRVFDHLVRAAASLMLNALNNGTSFGLL-LAEAVPLWVRVDYGKRHFFKC 295 Query 295 LDTVLGAGEGFENTTGTLAP---RAAVPAGAVVIAFSTLLDTEFALALIDLRKRGH--VV 349 +D + A N R+ PA A ++ FSTLL E AL + G+ VV Sbjct 296 IDFLSTAKPDRNNMIAYQVEHLIRSRFPARAQLLYFSTLLTEESREALRTMSAYGYRVVV 355 Query 350 VAVDVLDSCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMG 404 ++ D + + + L VR+ L+R A R MAT G+ ++ W L+ ++ Sbjct 356 ISPDPYSLVEPKTKEEELAVRILRLKRKAQLRRMATYGI-IIDWDVKKPLKAAIA 409 >gi|315501954|ref|YP_004080841.1| hypothetical protein ML5_1150 [Micromonospora sp. L5] gi|315408573|gb|ADU06690.1| protein of unknown function DUF58 [Micromonospora sp. L5] Length=453 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 123/418 (30%), Positives = 178/418 (43%), Gaps = 42/418 (10%) Query 25 GVALAAAVVAGRWQLIAFAAPL-LGVLCSISWQRPVPVIQVHGDPDSQRCFENEHVRVTV 83 GV L AAV+ GR L+ A P LG ++ +RP + ++ E + TV Sbjct 24 GVLLVAAVLLGRIDLVVLATPFALGTAYALR-RRPAALPELELGVGDTHLVEGAPLAATV 82 Query 84 ---------------------WVTTESVD-AAVELTVSALAGMQFEALESVSRRTT---T 118 W+ E V L VS G + SV R + Sbjct 83 AVANPDLVGYDLAVVRTRMSRWLRVEQVGFGGTGLDVSRSGGADRPFVTSVPRGSAVDLK 142 Query 119 VSAVAQRWGRYPIR-ARVAVVARGGLLMGAGTV-DAAEIVVFPLTPPQSTPLPQTELLDR 176 ++ A RWGR+PI A V V A GLL+ + D V+P T P Sbjct 143 LTGTALRWGRHPIGPAGVRVAAADGLLVSRAVITDPIRARVYPRTEPFDAVEAMPRAAGL 202 Query 177 LGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDM 236 +GAH +R G G E A +R + PGD+LR ++W VS R +LHV L+DR A+VVVL+D+ Sbjct 203 VGAHRSRRPGEGGELAGVRVFAPGDRLRRIDWRVSLRARQLHVASTLSDRDAEVVVLLDV 262 Query 237 YRQPA-----GPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQF 291 + + VR AA + + L GDR ++ G R L G+RQ+ Sbjct 263 LAEAGRSGGVNGTASVLDTTVRAAAALAEHYLHRGDRVSMLEY-GPAARRLRPATGRRQY 321 Query 292 YRVLDTVL---GAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHV 348 VL+ +L E P+ + + A+V+ + LLD A L L + G Sbjct 322 LTVLEWLLDVQAESSPHEPYDQVFGPQ-VLSSDALVVVLTPLLDERSAQMLARLARGGRF 380 Query 349 VVAVDVLDS---CPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSM 403 VVAVD L + P + + R+W L R M + GV V+ W SL + + Sbjct 381 VVAVDTLPAELPVPKERGWAEVAYRLWRLDRDTMIGQLREHGVPVVRWAGAGSLDEVL 438 >gi|330465825|ref|YP_004403568.1| hypothetical protein VAB18032_09250 [Verrucosispora maris AB-18-032] gi|328808796|gb|AEB42968.1| hypothetical protein VAB18032_09250 [Verrucosispora maris AB-18-032] Length=458 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 101/301 (34%), Positives = 146/301 (49%), Gaps = 21/301 (6%) Query 119 VSAVAQRWGRYPIRARVAVVARGGLLMGAGTVDAAEIV--VFPLTPPQSTPLPQTELLDR 176 ++ A RWGR+P A VA L+ + V A +V V+P T P Sbjct 148 LTGTALRWGRHPFGPAGARVAAAQGLLVSRAVIAEPVVNRVYPKTEPFEAVNAMPRAAGL 207 Query 177 LGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDM 236 +GAH +R G G E A +R + PGD+LR ++W VS R +LHV L+DR A+VVVL+D+ Sbjct 208 VGAHHSRRAGEGGELAGVRVFAPGDRLRRIDWRVSLRARQLHVAATLSDRDAEVVVLLDV 267 Query 237 YRQ---PAGPATEAT--ERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQF 291 + G A AT + VR AA + + L GDR ++ G N R L G+RQ+ Sbjct 268 LAEAGRSGGIAGAATVLDTTVRAAAAIAEHYLHRGDRVALLEYGPN-ARRLRPATGRRQY 326 Query 292 YRVLDTVLGAG------EGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKR 345 VL+ +L E ++ G+ + A A+V+ + LL+ A L L + Sbjct 327 LTVLEWLLDVKAQHSPHEPYDQVFGS----QLLSADALVVVLTPLLEERSAQMLARLARS 382 Query 346 GHVVVAVDVL--DSCPLQDQ-LDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQS 402 G VVAVD L D P +D+ + R+W L R M + GV V+ W SL Q Sbjct 383 GRFVVAVDTLPADLSPPKDRGWAEVAYRLWRLDRDTMIAQLREHGVPVVPWAGAGSLDQV 442 Query 403 M 403 + Sbjct 443 L 443 >gi|302865409|ref|YP_003834046.1| hypothetical protein Micau_0906 [Micromonospora aurantiaca ATCC 27029] gi|302568268|gb|ADL44470.1| protein of unknown function DUF58 [Micromonospora aurantiaca ATCC 27029] Length=453 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 123/418 (30%), Positives = 178/418 (43%), Gaps = 42/418 (10%) Query 25 GVALAAAVVAGRWQLIAFAAPL-LGVLCSISWQRPVPVIQVHGDPDSQRCFENEHVRVTV 83 GV L AAV+ GR L+ A P LG ++ +RP + ++ E + TV Sbjct 24 GVLLVAAVLLGRIDLVVLATPFALGTAYALR-RRPAALPELELGVGDTHLVEGAPLAATV 82 Query 84 ---------------------WVTTESVD-AAVELTVSALAGMQFEALESVSRRTTT--- 118 W+ E V L VS G + SV R + Sbjct 83 AVANPDLVGYDLAVVRTRMSRWLRVEQVGFGGTGLDVSRSGGADRPFVTSVPRGSAVDLE 142 Query 119 VSAVAQRWGRYPIR-ARVAVVARGGLLMGAGTV-DAAEIVVFPLTPPQSTPLPQTELLDR 176 ++ A RWGR+PI A V V A GLL+ + D V+P T P Sbjct 143 LTGTALRWGRHPIGPAGVRVAAADGLLVSRAVITDPIRARVYPRTEPFDAVEAMPRAAGL 202 Query 177 LGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDM 236 +GAH +R G G E A +R + PGD+LR ++W VS R +LHV L+DR A+VVVL+D+ Sbjct 203 VGAHRSRRPGEGGELAGVRVFAPGDRLRRIDWRVSLRARQLHVAATLSDRDAEVVVLLDV 262 Query 237 YRQPA-----GPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQF 291 + + VR AA + + L GDR ++ G R L G+RQ+ Sbjct 263 LAEAGRSGGVNGTASVLDTTVRAAAALAEHYLHRGDRVSMLEY-GPAARRLRPATGRRQY 321 Query 292 YRVLDTVL---GAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHV 348 VL+ +L E P+ + + A+V+ + LLD A L L + G Sbjct 322 LTVLEWLLDVQAESSPHEPYDQVFGPQ-VLSSDALVVVLTPLLDERSAQMLARLARGGRF 380 Query 349 VVAVDVLDS---CPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSM 403 VVAVD L + P + + R+W L R M + GV V+ W SL + + Sbjct 381 VVAVDTLPAELPVPKERGWAEVAYRLWRLDRDTMIGQLREHGVPVVRWAGAGSLDEVL 438 >gi|212224835|ref|YP_002308071.1| protein TON_1684 [Thermococcus onnurineus NA1] gi|212009792|gb|ACJ17174.1| conserved hypothetical membrane protein [Thermococcus onnurineus NA1] Length=435 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 97/391 (25%), Positives = 175/391 (45%), Gaps = 25/391 (6%) Query 31 AVVAGRWQLIAFAAPLLGVL-CSISWQRPVPVIQVHGDPDSQRCFENEHVRVTVWVTTES 89 A + RW+++ P+L +L ++ + +P +++ R E V + + + + Sbjct 48 AFLLLRWEMVYLTLPILWLLFIAVFFFKPSLNVEIERIIPHNRFLEGTEVEIQLRIKSRE 107 Query 90 VDAAVELTVSALAGMQFEALESVSRRTTTVSAVAQRWGRYPIRARVAVVARG--GLL--- 144 +++L + G+ E +E ++ +R RY +R + + GL Sbjct 108 RIPSLKLVENIPEGL--ELVEGSKEYVISLKKGEERILRYRVRVKRGIHEFNWVGLSYRD 165 Query 145 -MGAGTVDA-----AEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVGPGVEYADIRPYV 198 G VD EIV P+ TP +G + VG GVE+ IR Y Sbjct 166 PFGFFKVDKKIELYTEIVGVPIIEDVPTPYSTRGTKITVGPLPSPRVGEGVEFHAIREYQ 225 Query 199 PGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATEATERVVRGAAQV 258 PGD L+ +NW +AR GR+ ++R DVV ++D + + +VR AA + Sbjct 226 PGDPLKIINWKATARTGRIMANEYESERKVDVVFIVD----SSYTGELVFDYLVRAAASL 281 Query 259 VQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGFENTTGTLAP---R 315 + AL NG G++ L P W+ D G+R F++ +D + A N + Sbjct 282 MLDALNNGTSFGLL-LAEEVPLWVRIDYGKRHFFKCVDFLSTAKPDKNNLIAYQVEHLIK 340 Query 316 AAVPAGAVVIAFSTLLDTEFALALIDLRKRGH--VVVAVDVLDSCPLQDQLDPLVVRMWA 373 + PA A ++ FS LL E AL + + G+ VV++ + + + + + L +++ + Sbjct 341 SRFPARAQLLYFSPLLAEESREALKTMARYGYNVVVISPNPYTALEPKSREEELALKLLS 400 Query 374 LQRSAMYRDMATIGVDVLSWPADHSLQQSMG 404 LQR AM R MA G+ ++ W L+ ++ Sbjct 401 LQRKAMLRKMAAYGI-IIDWDVRKPLKSAIA 430 >gi|159036502|ref|YP_001535755.1| hypothetical protein Sare_0846 [Salinispora arenicola CNS-205] gi|157915337|gb|ABV96764.1| protein of unknown function DUF58 [Salinispora arenicola CNS-205] Length=467 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 99/303 (33%), Positives = 145/303 (48%), Gaps = 25/303 (8%) Query 119 VSAVAQRWGRYPI-RARVAVVARGGLLMGAGTV-DAAEIVVFPLTPPQSTPLPQTELLDR 176 +S A+RWGR+ + A A GLL+ V +A ++ +P+T P Sbjct 157 LSGTARRWGRHSLGPAGTQASAALGLLVSPPVVTEAIQVSTYPVTDPFDAVEAMPRAAGL 216 Query 177 LGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDM 236 +GAH +R G G E A +R + PGD+LR ++W VS R +LHV L+DR A+VVVL+D+ Sbjct 217 VGAHHSRRPGEGGELAGVRVFAPGDRLRRIDWRVSLRARQLHVAATLSDRDAEVVVLLDV 276 Query 237 YRQPA-----GPATEATERVVRGAAQVVQTALRNGDRAGIVALG--GNRPRWLGADIGQR 289 + G + VR AA + + L GDR +V G G R R G+R Sbjct 277 LAEAGRSGGVGGTASVLDTTVRAAAAIAEHYLHRGDRVSMVEYGPAGRRLR---PATGRR 333 Query 290 QFYRVLDTVL------GAGEGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLR 343 QF VL+ +L E +++ G+ + + A+V+ + LLD A L L Sbjct 334 QFLTVLEWLLDVHPQSSPHELYDSVLGS----QMLSSDALVVVLTPLLDERSAQMLARLA 389 Query 344 KRGHVVVAVDVL--DSCPLQDQ-LDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQ 400 G VVAVD L D P +D+ R+W L R M R + GV V+ W SL Sbjct 390 WSGRFVVAVDTLPIDLTPPRDRGWAEAAHRLWRLDRDTMVRQLREHGVPVVRWAGAGSLD 449 Query 401 QSM 403 + + Sbjct 450 EVL 452 >gi|238062765|ref|ZP_04607474.1| hypothetical protein MCAG_03731 [Micromonospora sp. ATCC 39149] gi|237884576|gb|EEP73404.1| hypothetical protein MCAG_03731 [Micromonospora sp. ATCC 39149] Length=457 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 104/341 (31%), Positives = 158/341 (47%), Gaps = 20/341 (5%) Query 80 RVTVWVTTESVD---AAVELTVSALAGMQFEALESVSRRTTTVSAVAQRWGRYPIRARVA 136 RV+ W+ E A V+L+ S + +++ + ++ A+RWGR+PI A Sbjct 105 RVSPWLLVERAGVGGARVDLSRSGVDRPFVTVVDTGTAVDLELAGKARRWGRHPIGPAGA 164 Query 137 VVARGGLLM--GAGTVDAAEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVGPGVEYADI 194 VA G L+ A + V+P T P +GAH +R G G E A + Sbjct 165 RVAAAGGLLVSRAAITEPVRFRVYPRTEPFEAVEAMPRAAGLVGAHHSRRPGEGGELAGV 224 Query 195 RPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQP------AGPATEAT 248 R + PGD+LR V+W VS R +LHV L+DR A+VVVL+D+ + GPA+ Sbjct 225 RVFGPGDRLRRVDWRVSLRARQLHVAATLSDRDAEVVVLLDVLAEAGRSGGVGGPAS-VL 283 Query 249 ERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVL---GAGEGF 305 + VR AA + + L GDR ++ G R L G+RQ+ +L+ +L Sbjct 284 DTTVRAAAAIGEHYLHRGDRVAMLEY-GPAARRLRPATGRRQYLTLLEWLLDVRAESSPH 342 Query 306 ENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDS---CPLQD 362 E P+ + + A+V+ + LLD A L + + G VVAVD L + P + Sbjct 343 EPYDQVFGPQ-ILSSDALVVVLTPLLDERSAQMLARMARSGRFVVAVDTLPADLPPPGRH 401 Query 363 QLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSM 403 + R+W L R M + GV V+ W SL Q + Sbjct 402 GWSEVAFRLWRLDRDTMIGQLREHGVPVVGWAGAGSLDQVL 442 >gi|145593461|ref|YP_001157758.1| hypothetical protein Strop_0903 [Salinispora tropica CNB-440] gi|145302798|gb|ABP53380.1| protein of unknown function DUF58 [Salinispora tropica CNB-440] Length=466 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 125/426 (30%), Positives = 185/426 (44%), Gaps = 55/426 (12%) Query 25 GVALAAAVVAGRWQLIAFAAPL-LGVLCSISWQRPVPVIQVH------------------ 65 G+ L A V+ GR L+ AAP +G ++ +RP + QV Sbjct 34 GLLLIAGVLFGRVDLVVLAAPFAIGTAYALR-RRPAALPQVQIAAEGNQVEGGELSGQVT 92 Query 66 -GDPDS-QRCFENEHVRVTVWVTTESVD-AAVELTVSALAGMQFEALESVSRRTTTVSAV 122 G+P+S R + W+ E V A T +A G Q ++ TTV A Sbjct 93 VGNPESVDYDLALLQSRASRWLQVERVTIAGTAATRAASHGGQPVVDRPLA---TTVPAD 149 Query 123 A----------QRWGRYPI-RARVAVVARGGLLMGAGTV-DAAEIVVFPLTPPQSTPLPQ 170 A +RWGR+P+ V A GLL+ V +A + +P+T P Sbjct 150 ALVEVDLYGTVRRWGRHPLGPVGVQACAALGLLVSRPVVAEAVPVSTYPVTEPFDAVEAM 209 Query 171 TELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADV 230 +GAH +R G G E A +R + PGD+LR V+W VS R +LHV L+DR A+V Sbjct 210 PRAAGLVGAHHSRRPGEGGELAGVRVFAPGDRLRRVDWRVSLRARQLHVAATLSDRDAEV 269 Query 231 VVLIDMYRQPA-----GPATEATERVVRGAAQVVQTALRNGDRAGIVALG--GNRPRWLG 283 V+L+D+ + G + VR AA + + L GDR ++ G G R R Sbjct 270 VLLLDVLAEAGRSGGVGGTASVLDTTVRAAAAIAEHYLHRGDRVSMLEYGPAGRRLR--- 326 Query 284 ADIGQRQFYRVLDTVLGAG---EGFENTTGTLAPRAAVPAGAVVIAFSTLLDTEFALALI 340 G+R + VL+ +L E P+ + + A+V+ + LLD A L Sbjct 327 PATGRRHYLTVLEWLLDVHPQPSPHEPYDSVFGPQ-LLSSDALVVVLTPLLDERSAQMLA 385 Query 341 DLRKRGHVVVAVDVL--DSCPLQD-QLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADH 397 L G VVAVD L D P ++ + + R+W L R M + GV V+ W Sbjct 386 RLAWSGRFVVAVDTLPDDLAPSRERRWSEVAHRLWRLDRDTMLCQLREHGVPVVRWAGAG 445 Query 398 SLQQSM 403 SL + + Sbjct 446 SLDEVL 451 >gi|315231670|ref|YP_004072106.1| hypothetical protein TERMP_01908 [Thermococcus barophilus MP] gi|315184698|gb|ADT84883.1| hypothetical protein TERMP_01908 [Thermococcus barophilus MP] Length=412 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 91/409 (23%), Positives = 179/409 (44%), Gaps = 27/409 (6%) Query 12 RASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGVL-CSISWQRPVPVIQVHGDPDS 70 +A QL LA+ VA RW +I P+L + ++++ +P +++ Sbjct 10 KAEQLLLALWLSVMVAFFML----RWDMIYLTLPMLWLFFVAMTFFKPRLDVEIKRILPH 65 Query 71 QRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQF-----EALESVSR---RTTTVSAV 122 R E + + + + ++++ G++ E L S +R + + Sbjct 66 DRILEGSEIEIRLKIKANERIPSLKIADDLPKGLELVEGKNEFLLSFTRGEEKEVSYKVK 125 Query 123 AQRWGRYPIRARVAVVARGGLLMGAGTVDAA-EIVVFPLTPPQSTPLPQTELLDRLGAHL 181 +R +++ G +D E++ P+ TP +G Sbjct 126 VKRGIHEFNFIKLSYQDPFGFFKIEKIIDLYDELIGVPIVEDVVTPYSTKGTKVTVGPLP 185 Query 182 TRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPA 241 + +G GVE+ IR Y PGD L+ +NW +A+ G++ ++R DV++++D A Sbjct 186 SPRIGEGVEFHAIREYQPGDPLKIINWKATAKTGKIMSNEYESERKVDVILIVD-----A 240 Query 242 GPATEAT-ERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLG 300 E+T + ++R AA + L +G G++ L + P W+ D G+R F++ +D + Sbjct 241 TYKGESTFDHLIRAAASFMLDCLNSGTSFGLL-LAEDVPLWIRVDYGKRHFFKCIDFLSM 299 Query 301 AGEGFENTTGTLAP---RAAVPAGAVVIAFSTLLDTEFALALIDLRKRGH--VVVAVDVL 355 A N R+ PA A ++ FS L+ E AL L + G+ VV++ D Sbjct 300 AKPDKNNMIAYQVEHLVRSRFPARAQILYFSPLITEEGREALKVLYRYGYKVVVISPDPY 359 Query 356 DSCPLQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMG 404 + + + L +++ L+R A R +A G+ ++ W + SL+ ++ Sbjct 360 SALKPKSVEEALALKILQLKRKAHLRKLAAYGI-IIDWDVNKSLKTAIA 407 >gi|14590643|ref|NP_142711.1| hypothetical protein PH0774 [Pyrococcus horikoshii OT3] gi|3257183|dbj|BAA29866.1| 410aa long hypothetical protein [Pyrococcus horikoshii OT3] Length=410 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 96/423 (23%), Positives = 184/423 (44%), Gaps = 38/423 (8%) Query 12 RASQLTLAIATCAGVALAAAVVAGRWQLIAFAAPLLGV-LCSISWQRPVPVIQVHGDPDS 70 +A+ ++ T + + ++ + RW+ I P+L V L S + +P ++V + Sbjct 2 KATGKAYSLLTIIWIIVISSYLLLRWEGIVLTLPVLFVFLFSALFFKPAIEVKVSREIRR 61 Query 71 QRCFENEHVRVTVWVTTESVDAAVELTVSALAGMQFEALESVSRR--TTTVSAVAQRWGR 128 R E E +T+ V + + + + +L+ + R T++ +R R Sbjct 62 HRLIEGEETEITIRVVS-----GANIKSLYIQDLTPPSLKVIDRNYWITSLRRSEERVFR 116 Query 129 YPIRA----------RVAVVARGGLLMGAGTVDAA-EIVVFPLTPPQSTPLPQTELLDRL 177 Y +R R++ GL V+ EI+ P TP Sbjct 117 YKVRVSRGKHEFPGVRISYRDPFGLFEEDYIVEVYDEIIGVPRIEEVVTPYSTKGTKITT 176 Query 178 GAHLTRHVGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMY 237 G + +G G+E+ +R Y PGD ++ +NW +A+ G++ ++R DVV+++D Sbjct 177 GHLPSPRLGEGLEFHAVREYRPGDPMKVINWKATAKTGKIMANEFESERKVDVVLIVDAT 236 Query 238 RQPAGPATEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDT 297 + E + ++R AA ++ AL NG G++ + P W+ D G+R F++ +D Sbjct 237 YK----GKEVFDYLIRVAASLLMDALENGTSFGLL-ISEAVPVWIKVDYGKRHFFKCIDV 291 Query 298 VLGAGEGFENTTGTLAP---RAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDV 354 + + N R +P A +I S LL E A+ +L K G+ +V V Sbjct 292 LSMSKPDKNNLIAYQVEHLARTRLPPRAQIIFISPLLTQESEKAIFELYKLGYKIV---V 348 Query 355 LDSCPL-----QDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMGALPNR 409 L P + + + + +R+ +L+R A + + G+ V+ W L+ ++ L + Sbjct 349 LSPNPYSLREPKSKEEEIAIRILSLKRMARIKKVREWGI-VIDWNVREPLKATI--LNSI 405 Query 410 RRR 412 RRR Sbjct 406 RRR 408 >gi|337283779|ref|YP_004623253.1| hypothetical protein PYCH_02840 [Pyrococcus yayanosii CH1] gi|334899713|gb|AEH23981.1| hypothetical protein PYCH_02840 [Pyrococcus yayanosii CH1] Length=407 Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 102/399 (26%), Positives = 171/399 (43%), Gaps = 51/399 (12%) Query 36 RWQLIAFAAPLLGVL-CSISWQRPVPVIQVHGDPDSQRCFENEHVRVTVWVTTESVDAAV 94 RW +I P+L + ++ + +P+ ++V +R E E V +TV Sbjct 26 RWDMIYLTLPILTLFFVAVLFFKPIIDVKVERVLLRERVLEGEEVEITV----------- 74 Query 95 ELTVSALAGMQF--------EALESVSRRTTTVSAVAQ------------RWGRYPIRA- 133 V ALA + F E +E V + V ++A+ R G + R Sbjct 75 --RVRALARIPFLFIRDELPEGVELVEGSNSWVLSLAEGEEKVLRYRVRVRRGIHEFRGF 132 Query 134 RVAVVARGGLLMGAGTVDA-AEIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVGPGVEYA 192 VA GL VD EIV P TP +G + VG GVE+ Sbjct 133 YVAYRDPFGLFEEERFVDVYGEIVGVPRLEEVITPYSTRGTKVTVGPLPSPRVGEGVEFH 192 Query 193 DIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLID-MYRQPAGPATEATERV 251 +R Y PGD + +NW +AR G++ ++R DV+ ++D Y+ A + + Sbjct 193 AVREYQPGDPFKIINWKATARTGKIMANEFESERKVDVIFVVDATYKGEA-----VFDYL 247 Query 252 VRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGFENTTGT 311 +R AA ++ +L NG G++ L + P W+G D G+R F+R +D + A N Sbjct 248 IRAAASLMLDSLNNGTSFGLL-LSESVPLWIGVDYGKRHFFRCIDALSAAKPDKNNMIAY 306 Query 312 LAP---RAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSCPL---QDQLD 365 R P A ++ FS L+ E AL L G+ VV + + C L + + + Sbjct 307 QVDHLARTRFPPRAQILYFSPLITEEGREALRILYLYGYRVVVISP-NPCSLIEPRSREE 365 Query 366 PLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSMG 404 L +++ L+R A+ R ++ G ++ W L+ ++ Sbjct 366 ELALKLLMLERKAVIRKLSAYG-PIIDWDVRKPLKTAIA 403 >gi|332159056|ref|YP_004424335.1| hypothetical protein PNA2_1416 [Pyrococcus sp. NA2] gi|331034519|gb|AEC52331.1| hypothetical protein PNA2_1416 [Pyrococcus sp. NA2] Length=410 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 98/402 (25%), Positives = 189/402 (48%), Gaps = 26/402 (6%) Query 19 AIATCAGVALAAAVVAGRWQLIAFAAPLLGVLCSI--SWQRPVPVIQVHGDPDSQRCFEN 76 ++ T + + ++ + RW+ I A P++ V+ S ++ +P +++ D +R E Sbjct 9 SLLTIMWIIIVSSYLLVRWEGIVLALPII-VMFSFAATFFKPEIKVEITRDIKRKRAIEG 67 Query 77 EHVRVTVWVTTESVDAAV---ELTVSALA--GMQF--EALESVSRRTTTVSAVAQRWGRY 129 E V +T+ + ++S A+ +LT +L G + +L+ RT + +R GR+ Sbjct 68 EEVEITIKIKSKSNIRALYVEDLTPDSLEILGRNYWVISLKDGEERTLSYKVRVKR-GRH 126 Query 130 PIRA-RVAVVARGGLLMGAGTVDAA-EIVVFPLTPPQSTPLPQTELLDRLGAHLTRHVGP 187 +V+ L ++A EI+ P+ TP G + +G Sbjct 127 EFLGIKVSYRDPFDLFEEDRIIEAYDEIIGVPMVEDIVTPYSTKGTKITTGPLPSPRLGE 186 Query 188 GVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLID-MYRQPAGPATE 246 G+E+ IR Y PGD ++ +NW +A+ G L ++R DVV+++D YR E Sbjct 187 GLEFHAIREYRPGDPIKIINWKATAKVGELMANEFESERKVDVVLVVDATYR-----GEE 241 Query 247 ATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGFE 306 + ++R AA ++ AL NG G++ + + P W+ D G+R F+R +D + + Sbjct 242 VFDYLIRAAASLLLDALGNGTSFGLL-ISESVPVWVRVDYGKRHFFRCIDVLSVSKPDKN 300 Query 307 NTTGTLAPRAA---VPAGAVVIAFSTLLDTEFALALIDLRKRGH--VVVAVDVLDSCPLQ 361 N A +P A +I S LL E A+ +L K G+ ++++ D + Sbjct 301 NMIAYQIEHLAKTRLPPKAQIIFISPLLTQESEEAIFELYKLGYKIIIISPDPYSLRTPR 360 Query 362 DQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSM 403 + + + +R+ L+R A R ++ G+ V+ W +SL+ ++ Sbjct 361 TKEEEIALRILKLKRRARIRKVSNWGI-VIDWNVKNSLKGTI 401 >gi|18976890|ref|NP_578247.1| hypothetical protein PF0518 [Pyrococcus furiosus DSM 3638] gi|18892503|gb|AAL80642.1| hypothetical protein PF0518 [Pyrococcus furiosus DSM 3638] Length=407 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/224 (27%), Positives = 114/224 (51%), Gaps = 11/224 (4%) Query 185 VGPGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPA 244 +G G+E+ +R Y PGD ++ +NW +A+ G+L V ++R DVV++ID + A Sbjct 184 IGEGLEFHAVREYHPGDPIKIMNWKATAKVGKLMVNEFESERKVDVVLVIDATYK----A 239 Query 245 TEATERVVRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEG 304 E + ++R AA ++ +L+NG G++ + + P W+ D G+R F++ +D + A Sbjct 240 GEVFDHMMRAAASLLFDSLKNGTSFGLL-ISESVPLWMKVDYGKRHFFKCIDVLSMASPD 298 Query 305 FENTTGTLAP---RAAVPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAV--DVLDSCP 359 N R +P A +I S + E ALI + + G+ +VA+ D Sbjct 299 KNNLIAYQVEHLARTKIPPRAQIIFISPFMTKESEDALITMYRFGYRIVAISPDPYSLIK 358 Query 360 LQDQLDPLVVRMWALQRSAMYRDMATIGVDVLSWPADHSLQQSM 403 + + + L VR+ +L+R A R + + ++ W + L+ ++ Sbjct 359 PKTREEELAVRLLSLKRKARIRKLRSYA-PIIDWNVNVPLKSAV 401 >gi|254167952|ref|ZP_04874800.1| conserved hypothetical protein [Aciduliprofundum boonei T469] gi|289596021|ref|YP_003482717.1| protein of unknown function DUF58 [Aciduliprofundum boonei T469] gi|197622995|gb|EDY35562.1| conserved hypothetical protein [Aciduliprofundum boonei T469] gi|289533808|gb|ADD08155.1| protein of unknown function DUF58 [Aciduliprofundum boonei T469] Length=391 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/215 (31%), Positives = 103/215 (48%), Gaps = 10/215 (4%) Query 146 GAGTVDAAEIVVFP-LTPPQSTPLPQTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLR 204 G+ D E+ ++P + + + + LG + +R GPG+E+ DIR Y PGD +R Sbjct 129 GSKVKDRGELRIYPKIEYIRKLKIKPRKTRSILGDYPSRMKGPGIEFTDIREYSPGDDMR 188 Query 205 AVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATEATERV---VRGAAQVVQT 261 +NW +ARR +L V ++R D V+L+D+ R G A E + + VR AA + Sbjct 189 FINWKATARRNKLMVNEYESERTGDTVILLDVRRFLKG-AEEYEDLLNASVRAAATLATY 247 Query 262 ALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGA-GEGFENTT---GTLAPRAA 317 R R G V L GN W+ G+R Y +LD +L E T G Sbjct 248 LSRTRSRVGFVVL-GNTVDWIYPTYGKRAMYLILDRLLHLRSEKISRLTFDYGKFIVSRF 306 Query 318 VPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAV 352 P + VI S LL + ++++L +G+ V+ + Sbjct 307 FPPNSFVILISPLLSWDIDDSIVELLAKGYDVLVI 341 >gi|254168120|ref|ZP_04874967.1| conserved hypothetical protein [Aciduliprofundum boonei T469] gi|197622886|gb|EDY35454.1| conserved hypothetical protein [Aciduliprofundum boonei T469] Length=391 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/215 (31%), Positives = 103/215 (48%), Gaps = 10/215 (4%) Query 146 GAGTVDAAEIVVFP-LTPPQSTPLPQTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLR 204 G+ D E+ ++P + + + + LG + +R GPG+E+ DIR Y PGD +R Sbjct 129 GSKVKDRGELRIYPKIEYIRKLKIKPRKTRSILGDYPSRMKGPGIEFTDIREYSPGDDMR 188 Query 205 AVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATEATERV---VRGAAQVVQT 261 +NW +ARR +L V ++R D V+L+D+ R G A E + + VR AA + Sbjct 189 FINWKATARRNKLMVNEYESERTGDTVILLDVRRFLKG-AEEYEDLLNASVRAAATLATY 247 Query 262 ALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGA-GEGFENTT---GTLAPRAA 317 R R G V L GN W+ G+R Y +LD +L E T G Sbjct 248 LSRTRSRVGFVVL-GNTVDWIYPTYGKRAMYLILDRLLHLRSEKISRLTFDYGKFIVSRF 306 Query 318 VPAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAV 352 P + VI S LL + ++++L +G+ V+ + Sbjct 307 FPPNSFVILISPLLSWDIDDSIVELLAKGYDVLVI 341 >gi|291301392|ref|YP_003512670.1| hypothetical protein Snas_3922 [Stackebrandtia nassauensis DSM 44728] gi|290570612|gb|ADD43577.1| protein of unknown function DUF58 [Stackebrandtia nassauensis DSM 44728] Length=459 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 114/407 (29%), Positives = 178/407 (44%), Gaps = 40/407 (9%) Query 26 VALAAAVVAGRWQLIAFAAPL-LGVLCSISWQRP--VPVIQVHGDPDSQRCFENEHVRVT 82 VAL ++ GR L+ + PL LG+ S++ +RP P +++ G P++ E +R Sbjct 49 VALGLGLILGRVDLLLVSMPLALGLAASLT-RRPRRSPELRLLGMPETP-LLEGGELRAE 106 Query 83 VWVTTESVDAAVE---------LTVSALAGMQFEALESVSRRTTTVSAVAQRWGRY---P 130 + V+ V + +S Q + + + ++AV +RWG + P Sbjct 107 IEVSNPDEVEIVAVARPRVSQWIRLSHGGFRQAAVVPADGHASLPLTAVTRRWGLHRFGP 166 Query 131 IRARVAVVARGGLLMGAGTVDAAEIVVFP----LTPPQSTPLPQTELLDRLGAHLTRHVG 186 I R A+ G L +V + V+P QS LP+ L G H TR G Sbjct 167 IEVR-ALACDGLLRSRQLSVAKQTLTVYPRAALFDSRQS--LPRAAGL--AGVHHTRRPG 221 Query 187 PGVEYADIRPYVPGDQLRAVNWVVSARRGRLHVTRRLTDRAADVVVLIDMYRQPAGPATE 246 G E A++R + PGD+LR+++W VS R+ LHV ++R ADV++L+D+ + P Sbjct 222 DGGELAEVRRFQPGDRLRSIDWRVSLRQRELHVNATYSERDADVLILLDVLSEVGQPGQA 281 Query 247 ATERV-VRGAAQVVQTALRNGDRAGIVALGGNRPRWLGADIGQRQFYRVLDTVLGAGEGF 305 ++ V VR AA + + GDR + G G R+ Y ++ L + Sbjct 282 SSLDVTVRAAAAIAEHYTSQGDRVAMAEFGSKNR--RLRAGGGRRHYALVQDWLTHVDPS 339 Query 306 ENTTGTLAPRAAV----PAGAVVIAFSTLLDTEFALALIDLRKRGHVVVAVDVLDSC--P 359 A R V P A +I + LLD L L + G +VAVD L P Sbjct 340 RGEIRAAAERQLVSRKLPGSAAIIMLTPLLDPRSTSGLARLAQTGRPLVAVDTLPPGVRP 399 Query 360 LQD-QLDPLVVRMWALQRSAMYRDMATIGVDVLSW----PADHSLQQ 401 Q + L R+W L+R + +GV V W DH L+Q Sbjct 400 TQQREWTQLAFRLWHLERDNTLNRLRALGVPVERWMGPGSLDHMLRQ 446 Lambda K H 0.323 0.135 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 859091811192 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40