BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3166c
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
gi|15842743|ref|NP_337780.1| hypothetical protein MT3255 [Mycoba... 615 2e-174
gi|15610302|ref|NP_217682.1| hypothetical protein Rv3166c [Mycob... 615 2e-174
gi|121639050|ref|YP_979274.1| hypothetical protein BCG_3190c [My... 614 4e-174
gi|308377241|ref|ZP_07441630.2| hypothetical protein TMHG_02382 ... 614 5e-174
gi|340628143|ref|YP_004746595.1| hypothetical protein MCAN_31811... 612 2e-173
gi|167970167|ref|ZP_02552444.1| hypothetical protein MtubH3_1989... 578 3e-163
gi|289571380|ref|ZP_06451607.1| conserved hypothetical protein [... 454 6e-126
gi|240169648|ref|ZP_04748307.1| hypothetical protein MkanA1_1006... 313 3e-83
gi|342861073|ref|ZP_08717722.1| hypothetical protein MCOL_19417 ... 310 3e-82
gi|296169172|ref|ZP_06850826.1| conserved hypothetical protein [... 308 6e-82
gi|336459325|gb|EGO38268.1| hypothetical protein MAPs_04240 [Myc... 305 7e-81
gi|118466236|ref|YP_883206.1| hypothetical protein MAV_4054 [Myc... 305 9e-81
gi|41409318|ref|NP_962154.1| hypothetical protein MAP3220c [Myco... 301 1e-79
gi|254819290|ref|ZP_05224291.1| hypothetical protein MintA_05153... 294 1e-77
gi|183981420|ref|YP_001849711.1| hypothetical protein MMAR_1397 ... 291 7e-77
gi|118617964|ref|YP_906296.1| hypothetical protein MUL_2480 [Myc... 289 4e-76
gi|254776475|ref|ZP_05217991.1| hypothetical protein MaviaA2_176... 212 6e-53
gi|108797132|ref|YP_637329.1| hypothetical protein Mmcs_0152 [My... 203 3e-50
gi|126432755|ref|YP_001068446.1| hypothetical protein Mjls_0142 ... 197 2e-48
gi|333990619|ref|YP_004523233.1| hypothetical protein JDM601_197... 186 3e-45
gi|118468107|ref|YP_888160.1| hypothetical protein MSMEG_3869 [M... 161 1e-37
gi|145221082|ref|YP_001131760.1| hypothetical protein Mflv_0478 ... 160 3e-37
gi|120401206|ref|YP_951035.1| hypothetical protein Mvan_0178 [My... 155 9e-36
gi|169628999|ref|YP_001702648.1| hypothetical protein MAB_1911c ... 130 3e-28
gi|111021497|ref|YP_704469.1| hypothetical protein RHA1_ro04525 ... 119 9e-25
gi|54022421|ref|YP_116663.1| hypothetical protein nfa4570 [Nocar... 117 2e-24
gi|226363850|ref|YP_002781632.1| hypothetical protein ROP_44400 ... 102 6e-20
gi|333918365|ref|YP_004491946.1| hypothetical protein AS9A_0692 ... 90.1 5e-16
gi|2326703|emb|CAB11016.1| hypothetical protein MLCB1779.35c [My... 77.4 3e-12
gi|254168061|ref|ZP_04874909.1| hypothetical protein ABOONEI_208... 55.8 9e-06
gi|254168157|ref|ZP_04875004.1| hypothetical protein ABOONEI_774... 55.5 1e-05
gi|238062762|ref|ZP_04607471.1| hypothetical protein MCAG_03728 ... 55.5 1e-05
gi|21224463|ref|NP_630242.1| transmembrane protein [Streptomyces... 55.1 2e-05
gi|289768224|ref|ZP_06527602.1| transmembrane protein [Streptomy... 54.7 2e-05
gi|302865406|ref|YP_003834043.1| hypothetical protein Micau_0903... 53.1 5e-05
gi|315501951|ref|YP_004080838.1| hypothetical protein ML5_1147 [... 53.1 5e-05
gi|256392264|ref|YP_003113828.1| hypothetical protein Caci_3078 ... 53.1 5e-05
gi|291299105|ref|YP_003510383.1| hypothetical protein Snas_1587 ... 50.4 3e-04
gi|167043243|gb|ABZ07950.1| putative transglutaminase-like super... 49.3 9e-04
gi|330465822|ref|YP_004403565.1| hypothetical protein VAB18032_0... 47.8 0.002
gi|317124513|ref|YP_004098625.1| hypothetical protein Intca_1382... 47.8 0.003
gi|84494290|ref|ZP_00993409.1| hypothetical protein JNB_05829 [J... 47.0 0.004
gi|145593458|ref|YP_001157755.1| hypothetical protein Strop_0900... 46.2 0.006
gi|291336365|gb|ADD95922.1| putative transglutaminase-like super... 41.6 0.17
gi|159036499|ref|YP_001535752.1| hypothetical protein Sare_0843 ... 41.2 0.21
gi|284029394|ref|YP_003379325.1| hypothetical protein Kfla_1425 ... 41.2 0.25
gi|119715712|ref|YP_922677.1| hypothetical protein Noca_1476 [No... 39.3 0.81
gi|148655025|ref|YP_001275230.1| hypothetical protein RoseRS_086... 38.9 1.2
gi|291569600|dbj|BAI91872.1| two-component hybrid histidine kina... 38.5 1.6
gi|170047961|ref|XP_001851471.1| ctl transporter [Culex quinquef... 38.1 1.9
>gi|15842743|ref|NP_337780.1| hypothetical protein MT3255 [Mycobacterium tuberculosis CDC1551]
gi|254233780|ref|ZP_04927105.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|308379428|ref|ZP_07486262.2| hypothetical protein TMJG_03344 [Mycobacterium tuberculosis SUMu010]
gi|13883066|gb|AAK47594.1| hypothetical protein MT3255 [Mycobacterium tuberculosis CDC1551]
gi|124599309|gb|EAY58413.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|308357023|gb|EFP45874.1| hypothetical protein TMJG_03344 [Mycobacterium tuberculosis SUMu010]
Length=321
Score = 615 bits (1587), Expect = 2e-174, Method: Compositional matrix adjust.
Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)
Query 1 MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA 60
MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA
Sbjct 3 MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA 62
Query 61 TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA 120
TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA
Sbjct 63 TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA 122
Query 121 RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS 180
RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS
Sbjct 123 RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS 182
Query 181 LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 240
LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA
Sbjct 183 LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 242
Query 241 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 300
MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE
Sbjct 243 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 302
Query 301 VAMRLLRLVLDELSTRTAI 319
VAMRLLRLVLDELSTRTAI
Sbjct 303 VAMRLLRLVLDELSTRTAI 321
>gi|15610302|ref|NP_217682.1| hypothetical protein Rv3166c [Mycobacterium tuberculosis H37Rv]
gi|31794343|ref|NP_856836.1| hypothetical protein Mb3191c [Mycobacterium bovis AF2122/97]
gi|148663021|ref|YP_001284544.1| hypothetical protein MRA_3199 [Mycobacterium tuberculosis H37Ra]
57 more sequence titles
Length=319
Score = 615 bits (1587), Expect = 2e-174, Method: Compositional matrix adjust.
Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)
Query 1 MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA 60
MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA
Sbjct 1 MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA 60
Query 61 TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA 120
TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA
Sbjct 61 TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA 120
Query 121 RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS 180
RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS
Sbjct 121 RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS 180
Query 181 LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 240
LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA
Sbjct 181 LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 240
Query 241 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 300
MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE
Sbjct 241 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 300
Query 301 VAMRLLRLVLDELSTRTAI 319
VAMRLLRLVLDELSTRTAI
Sbjct 301 VAMRLLRLVLDELSTRTAI 319
>gi|121639050|ref|YP_979274.1| hypothetical protein BCG_3190c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224991542|ref|YP_002646231.1| hypothetical protein JTY_3185 [Mycobacterium bovis BCG str. Tokyo
172]
gi|121494698|emb|CAL73179.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224774657|dbj|BAH27463.1| hypothetical protein JTY_3185 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341603089|emb|CCC65767.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=319
Score = 614 bits (1584), Expect = 4e-174, Method: Compositional matrix adjust.
Identities = 318/319 (99%), Positives = 319/319 (100%), Gaps = 0/319 (0%)
Query 1 MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA 60
MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA
Sbjct 1 MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA 60
Query 61 TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA 120
TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA
Sbjct 61 TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA 120
Query 121 RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS 180
RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS
Sbjct 121 RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS 180
Query 181 LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 240
LITSRRQRKSAPARISGDRIE+PAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA
Sbjct 181 LITSRRQRKSAPARISGDRIEAPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 240
Query 241 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 300
MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE
Sbjct 241 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 300
Query 301 VAMRLLRLVLDELSTRTAI 319
VAMRLLRLVLDELSTRTAI
Sbjct 301 VAMRLLRLVLDELSTRTAI 319
>gi|308377241|ref|ZP_07441630.2| hypothetical protein TMHG_02382 [Mycobacterium tuberculosis SUMu008]
gi|308348481|gb|EFP37332.1| hypothetical protein TMHG_02382 [Mycobacterium tuberculosis SUMu008]
Length=321
Score = 614 bits (1584), Expect = 5e-174, Method: Compositional matrix adjust.
Identities = 318/319 (99%), Positives = 319/319 (100%), Gaps = 0/319 (0%)
Query 1 MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA 60
MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA
Sbjct 3 MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA 62
Query 61 TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA 120
TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA
Sbjct 63 TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA 122
Query 121 RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS 180
RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIG+FLMVVAGS
Sbjct 123 RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGVFLMVVAGS 182
Query 181 LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 240
LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA
Sbjct 183 LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 242
Query 241 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 300
MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE
Sbjct 243 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 302
Query 301 VAMRLLRLVLDELSTRTAI 319
VAMRLLRLVLDELSTRTAI
Sbjct 303 VAMRLLRLVLDELSTRTAI 321
>gi|340628143|ref|YP_004746595.1| hypothetical protein MCAN_31811 [Mycobacterium canettii CIPT
140010059]
gi|340006333|emb|CCC45512.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=319
Score = 612 bits (1579), Expect = 2e-173, Method: Compositional matrix adjust.
Identities = 318/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)
Query 1 MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA 60
MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAA GSRAALMFIVAALAA
Sbjct 1 MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAACGSRAALMFIVAALAA 60
Query 61 TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA 120
TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA
Sbjct 61 TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA 120
Query 121 RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS 180
RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS
Sbjct 121 RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS 180
Query 181 LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 240
LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA
Sbjct 181 LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 240
Query 241 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 300
MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE
Sbjct 241 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 300
Query 301 VAMRLLRLVLDELSTRTAI 319
VAMRLLRLVLDELSTRTAI
Sbjct 301 VAMRLLRLVLDELSTRTAI 319
>gi|167970167|ref|ZP_02552444.1| hypothetical protein MtubH3_19898 [Mycobacterium tuberculosis
H37Ra]
gi|254552256|ref|ZP_05142703.1| hypothetical protein Mtube_17688 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|294995519|ref|ZP_06801210.1| hypothetical protein Mtub2_13657 [Mycobacterium tuberculosis
210]
gi|297732806|ref|ZP_06961924.1| hypothetical protein MtubKR_17032 [Mycobacterium tuberculosis
KZN R506]
gi|339296000|gb|AEJ48111.1| hypothetical protein CCDC5079_2921 [Mycobacterium tuberculosis
CCDC5079]
gi|339299609|gb|AEJ51719.1| hypothetical protein CCDC5180_2882 [Mycobacterium tuberculosis
CCDC5180]
Length=302
Score = 578 bits (1491), Expect = 3e-163, Method: Compositional matrix adjust.
Identities = 301/302 (99%), Positives = 302/302 (100%), Gaps = 0/302 (0%)
Query 18 VIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALIALAIITRLRHPL 77
+IVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALIALAIITRLRHPL
Sbjct 1 MIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALIALAIITRLRHPL 60
Query 78 PVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDS 137
PVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDS
Sbjct 61 PVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDS 120
Query 138 TATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISG 197
TATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISG
Sbjct 121 TATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISG 180
Query 198 DRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFD 257
DRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFD
Sbjct 181 DRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFD 240
Query 258 TPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRT 317
TPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRT
Sbjct 241 TPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRT 300
Query 318 AI 319
AI
Sbjct 301 AI 302
>gi|289571380|ref|ZP_06451607.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289545134|gb|EFD48782.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=231
Score = 454 bits (1169), Expect = 6e-126, Method: Compositional matrix adjust.
Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)
Query 89 MLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDSTATPDASSTTP 148
MLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDSTATPDASSTTP
Sbjct 1 MLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDSTATPDASSTTP 60
Query 149 SRPQPPQDNNDDVLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISGDRIESPAPSAR 208
SRPQPPQDNNDDVLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISGDRIESPAPSAR
Sbjct 61 SRPQPPQDNNDDVLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISGDRIESPAPSAR 120
Query 209 SESLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVE 268
SESLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVE
Sbjct 121 SESLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVE 180
Query 269 HRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRTAI 319
HRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRTAI
Sbjct 181 HRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRTAI 231
>gi|240169648|ref|ZP_04748307.1| hypothetical protein MkanA1_10062 [Mycobacterium kansasii ATCC
12478]
Length=319
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 188/312 (61%), Positives = 227/312 (73%), Gaps = 1/312 (0%)
Query 6 PGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALI 65
PG DKPTGRVV +I+LL+L AALRG+LP DG + G RAAL F++ AL+A++AL+
Sbjct 2 PGVDKPTGRVVGLILLLILVAAALRGYLPVADGGSHSEPGSGRAALTFVIVALSASVALM 61
Query 66 ALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVP 125
A A+I RLR P APSAG LS MLGG GRP+WRVLL+GLG I+AWLL+A LLARL VP
Sbjct 62 AFAMIARLRDPRVEAPSAGNLSEMLGGGKGRPSWRVLLIGLGVIVAWLLVATLLARLVVP 121
Query 126 DDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLM-VVAGSLITS 184
+V + P D +A P A Q P DN L IL A T+ L +M VVA +++
Sbjct 122 QEVASSLPSADQSAPPPAPRPAAPPRQHPPDNPGHTLEILLAYTVPLLIMIVVAAAVMAR 181
Query 185 RRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVAMERE 244
RR R + PAR++ D +E P P+ +E LARAAE+GLAEM DL REPREAIIACY AMERE
Sbjct 182 RRWRAAPPARVAADDVEFPGPAEGAELLARAAEVGLAEMTDLDREPREAIIACYAAMERE 241
Query 245 LSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREVAMR 304
L++VPG PQDFDTPTEVLARAV H L +A LV+LFAEARFSPHVMNE HRE+A+R
Sbjct 242 LANVPGAVPQDFDTPTEVLARAVAHGVLRPDNAGQLVNLFAEARFSPHVMNEGHRELAVR 301
Query 305 LLRLVLDELSTR 316
+LRLVLDEL+ R
Sbjct 302 VLRLVLDELAPR 313
>gi|342861073|ref|ZP_08717722.1| hypothetical protein MCOL_19417 [Mycobacterium colombiense CECT
3035]
gi|342131517|gb|EGT84787.1| hypothetical protein MCOL_19417 [Mycobacterium colombiense CECT
3035]
Length=314
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 193/317 (61%), Positives = 235/317 (75%), Gaps = 12/317 (3%)
Query 9 DKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALIALA 68
DKPTGRVV +IVLL++ AALRG+LPA A + +GG RAAL F+VA LA TLALIA+A
Sbjct 2 DKPTGRVVALIVLLLVVAAALRGYLPARHDAMRSESGG-RAALTFVVAILAVTLALIAVA 60
Query 69 IITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDV 128
++ RLR P APSAG LS MLG GRP+WRVLL+G I AWLLI +LLAR F+ +
Sbjct 61 VVARLRDPRAPAPSAGGLSDMLGTGKGRPSWRVLLIGAAVIAAWLLIVMLLAR-FLAHGI 119
Query 129 GPAAPIPDSTATPDASSTTPSRPQP------PQDNNDDVLGILFASTIGLFLMVVAGSLI 182
P PDS A P S+ P++P P P+D + ++LGIL A T+ + +M VAG++
Sbjct 120 APVLQPPDSGAAP--STHPPAQPAPQQHPHRPRDGSQNLLGILLACTVAMLVMFVAGTVA 177
Query 183 TSRRQ-RKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVAM 241
++RR+ R SAPA I+ + E AP+ RSESLARAAE GLAEMADL REPREAIIACY AM
Sbjct 178 SARRRWRPSAPA-IADEPAEPAAPAPRSESLARAAERGLAEMADLSREPREAIIACYAAM 236
Query 242 ERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREV 301
EREL+ VPG PQ+FDTPTEVLARAVEH ALH +A LV+LFAEARFSPHVMNE HR++
Sbjct 237 ERELAQVPGAVPQEFDTPTEVLARAVEHHALHADNAVRLVNLFAEARFSPHVMNETHRDI 296
Query 302 AMRLLRLVLDELSTRTA 318
A+ +LRLVLDEL R+A
Sbjct 297 AVGVLRLVLDELGARSA 313
>gi|296169172|ref|ZP_06850826.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896151|gb|EFG75817.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=318
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 184/315 (59%), Positives = 227/315 (73%), Gaps = 3/315 (0%)
Query 6 PGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALI 65
PG DKPTGRVV +IVLL++ AALRG+LP G+ AAL+F+VAAL +LAL+
Sbjct 4 PGVDKPTGRVVALIVLLLVVSAALRGYLPESPRGARGEPTGNPAALIFVVAALGVSLALV 63
Query 66 ALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVP 125
A+A++ RLR P AP AG+LS MLG GRP+WRV+L+GL ILAWLLI ++ +RL P
Sbjct 64 AIAVVARLRDPRAPAPQAGQLSEMLGTGRGRPSWRVVLIGLAVILAWLLIVVVTSRLLTP 123
Query 126 DDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGSLITSR 185
VG A P P + A P PQ N D GIL A+T+ + L++VAG+L+ SR
Sbjct 124 HGVGQAPPPPATGPA-AAEHPGAPAPPRPQPRNGDAFGILLAATVPMMLIIVAGTLVMSR 182
Query 186 RQRKSA--PARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVAMER 243
R+ ++A A +G+ E+PAP RSESLARAAE GLAEM DL REPREAIIACY AMER
Sbjct 183 RRWRAAGGTADEAGEPGEAPAPPTRSESLARAAERGLAEMTDLSREPREAIIACYAAMER 242
Query 244 ELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREVAM 303
EL++VPG PQDFDTPTEVLARAVEH+ LH +A LV+LFAEARFSPHVMNE HR+ A+
Sbjct 243 ELANVPGAVPQDFDTPTEVLARAVEHQVLHAENAVQLVNLFAEARFSPHVMNEGHRDRAV 302
Query 304 RLLRLVLDELSTRTA 318
R+L+LVLDEL R+A
Sbjct 303 RVLQLVLDELGARSA 317
>gi|336459325|gb|EGO38268.1| hypothetical protein MAPs_04240 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=318
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 192/317 (61%), Positives = 228/317 (72%), Gaps = 7/317 (2%)
Query 6 PGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALI 65
PG DKPTGRVV +IVLL++ AALRG+LPA A + AGG RAAL +VA LA TLALI
Sbjct 2 PGMDKPTGRVVALIVLLLVVAAALRGYLPAQHDATRSEAGG-RAALGLVVAILAVTLALI 60
Query 66 ALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVP 125
A+AI+ RL+ P AP AG LS LG GRP WRVLL+GLG I+AWLLI +LLARLF
Sbjct 61 AVAIVARLKDPRAPAPPAGALSETLGAGRGRPTWRVLLIGLGVIVAWLLIVMLLARLFAS 120
Query 126 DDVGPAAPIPDSTATPDASSTTPSRPQPPQ-----DNNDDVLGILFASTIGLFLMVVAGS 180
+ PA P P + A+P P P P D + D LGIL A T+ + LMVVA +
Sbjct 121 HGLSPAPP-PGTGASPPPHPAAPPAPPPQHPQRPRDGSQDTLGILLAGTVAMLLMVVASA 179
Query 181 LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 240
+ +RR+ +S + + E+PAP SESLARAAE GLAEMADLRR+PREAIIACY A
Sbjct 180 VAGARRRWRSPAPAVPDEPAENPAPQPHSESLARAAERGLAEMADLRRDPREAIIACYAA 239
Query 241 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 300
MEREL+HVPG PQDFDTP+EVLARAVEH ALH +A LV+LF EARFSPHVMNE HR+
Sbjct 240 MERELAHVPGAVPQDFDTPSEVLARAVEHHALHADNAVQLVNLFTEARFSPHVMNEGHRD 299
Query 301 VAMRLLRLVLDELSTRT 317
VA+R+LRLVLDEL +R+
Sbjct 300 VAVRVLRLVLDELGSRS 316
>gi|118466236|ref|YP_883206.1| hypothetical protein MAV_4054 [Mycobacterium avium 104]
gi|118167523|gb|ABK68420.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=320
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 192/317 (61%), Positives = 228/317 (72%), Gaps = 7/317 (2%)
Query 6 PGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALI 65
PG DKPTGRVV +IVLL++ AALRG+LPA A + AGG RAAL +VA LA TLALI
Sbjct 4 PGMDKPTGRVVALIVLLLVVAAALRGYLPAQHDATRSEAGG-RAALGLVVAILAVTLALI 62
Query 66 ALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVP 125
A+AI+ RL+ P AP AG LS LG GRP WRVLL+GLG I+AWLLI +LLARLF
Sbjct 63 AVAIVARLKDPRAPAPPAGALSETLGAGRGRPTWRVLLIGLGVIVAWLLIVMLLARLFAS 122
Query 126 DDVGPAAPIPDSTATPDASSTTPSRPQPPQ-----DNNDDVLGILFASTIGLFLMVVAGS 180
+ PA P P + A+P P P P D + D LGIL A T+ + LMVVA +
Sbjct 123 HGLAPAPP-PGTGASPPPHPAAPPAPPPQHPQRPRDGSQDTLGILLAGTVAMLLMVVASA 181
Query 181 LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 240
+ +RR+ +S + + E+PAP SESLARAAE GLAEMADLRR+PREAIIACY A
Sbjct 182 VAGARRRWRSPAPAVPDEPAENPAPQPHSESLARAAERGLAEMADLRRDPREAIIACYAA 241
Query 241 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 300
MEREL+HVPG PQDFDTP+EVLARAVEH ALH +A LV+LF EARFSPHVMNE HR+
Sbjct 242 MERELAHVPGAVPQDFDTPSEVLARAVEHHALHADNAVQLVNLFTEARFSPHVMNEGHRD 301
Query 301 VAMRLLRLVLDELSTRT 317
VA+R+LRLVLDEL +R+
Sbjct 302 VAVRVLRLVLDELGSRS 318
>gi|41409318|ref|NP_962154.1| hypothetical protein MAP3220c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398138|gb|AAS05768.1| hypothetical protein MAP_3220c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=317
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 192/317 (61%), Positives = 228/317 (72%), Gaps = 8/317 (2%)
Query 6 PGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALI 65
PG DKPTGRVV +IVLL++ AALRG+LPA A + AGG RAAL +VA LA TLALI
Sbjct 2 PGMDKPTGRVVALIVLLLVV-AALRGYLPAQHDATRSEAGG-RAALGLVVAILAVTLALI 59
Query 66 ALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVP 125
A+AI+ RL+ P AP AG LS LG GRP WRVLL+GLG I+AWLLI +LLARLF
Sbjct 60 AVAIVARLKDPRAPAPPAGALSETLGAGRGRPTWRVLLIGLGVIVAWLLIVMLLARLFAS 119
Query 126 DDVGPAAPIPDSTATPDASSTTPSRPQPPQ-----DNNDDVLGILFASTIGLFLMVVAGS 180
+ PA P P + A+P P P P D + D LGIL A T+ + LMVVA +
Sbjct 120 HGLSPAPP-PGTGASPPPHPAAPPAPPPQHPQRPRDGSQDTLGILLAGTVAMLLMVVASA 178
Query 181 LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA 240
+ +RR+ +S + + E+PAP SESLARAAE GLAEMADLRR+PREAIIACY A
Sbjct 179 VAGARRRWRSPAPAVPDEPAENPAPQPHSESLARAAERGLAEMADLRRDPREAIIACYAA 238
Query 241 MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE 300
MEREL+HVPG PQDFDTP+EVLARAVEH ALH +A LV+LF EARFSPHVMNE HR+
Sbjct 239 MERELAHVPGAVPQDFDTPSEVLARAVEHHALHADNAVQLVNLFTEARFSPHVMNEGHRD 298
Query 301 VAMRLLRLVLDELSTRT 317
VA+R+LRLVLDEL +R+
Sbjct 299 VAVRVLRLVLDELGSRS 315
>gi|254819290|ref|ZP_05224291.1| hypothetical protein MintA_05153 [Mycobacterium intracellulare
ATCC 13950]
Length=307
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/291 (58%), Positives = 208/291 (72%), Gaps = 7/291 (2%)
Query 30 RGHLPADDGAPLAAAGGSRAALMFIVAALAATLALIALAIITRLRHPLPVAPSAGELSAM 89
RG+ PA A + +GG RAA++F+VA LAATLAL+A+A++ RLR P APSAG LS M
Sbjct 15 RGYFPAQQHAARSESGG-RAAMVFVVAILAATLALVAIAVVARLRDPRAPAPSAGALSDM 73
Query 90 LGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDSTATP-----DAS 144
LG GRP+WRVLL+GL I+AWLLI +LL+RL P +GPA P P T S
Sbjct 74 LGTGRGRPSWRVLLVGLAVIVAWLLIVMLLSRLLAPHGIGPA-PSPSETGGQPPSGHGGS 132
Query 145 STTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISGDRIESPA 204
P + P+D + +LG+L AST + ++VAG++ T+RR++ RI+ + ESPA
Sbjct 133 PPPPQQQHRPRDGSQSMLGVLLASTAAMLFVIVAGTVATARRRQHPIALRIADEPAESPA 192
Query 205 PSARSESLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLA 264
+A SLARAAE GLAEM DL REPREAIIACY AMEREL+HVPG PQDFDTP+EVLA
Sbjct 193 AAAPPRSLARAAERGLAEMTDLSREPREAIIACYAAMERELAHVPGAVPQDFDTPSEVLA 252
Query 265 RAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELST 315
RAVE ALH +A LV+LF EARFSPHVMNE HR+VA+R+LRLVLDEL +
Sbjct 253 RAVERHALHADNAVQLVNLFTEARFSPHVMNEGHRDVAVRVLRLVLDELRS 303
>gi|183981420|ref|YP_001849711.1| hypothetical protein MMAR_1397 [Mycobacterium marinum M]
gi|183174746|gb|ACC39856.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=326
Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 177/313 (57%), Positives = 224/313 (72%), Gaps = 5/313 (1%)
Query 6 PGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALI 65
PG DKPTGRVV +IVLL+L AALRG+LP DDG+ SR AL+F++A L+ ++AL+
Sbjct 2 PGIDKPTGRVVALIVLLILVAAALRGYLPDDDGSSHTEPATSRPALVFVIAVLSGSVALM 61
Query 66 ALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVP 125
A AII RLR P VAPSAG+L+ MLGG R +WRVLL+GL I A+LL+ +LL+RLF P
Sbjct 62 AFAIIARLRDPRAVAPSAGDLAQMLGGGHRRTSWRVLLIGLAVIAAYLLLTLLLSRLFTP 121
Query 126 DDVGPAAPIPDSTA---TPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGSLI 182
D+V P+AP+ D T D + QP D+N + L IL A+T L L ++A +
Sbjct 122 DEVAPSAPVSDPGVPAPTGDGAPRPQQPQQP-SDDNINTLEILLAATAPLLLTILAAVAV 180
Query 183 TSRRQRKSAPARISGDRI-ESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVAM 241
RR+ ++ + D ESP P RS+ L RAA++GLAEMADL R+PREAIIACY AM
Sbjct 181 LWRRRWRAETSNTHTDVAGESPEPPQRSQLLVRAAKVGLAEMADLERDPREAIIACYAAM 240
Query 242 ERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREV 301
EREL++VP AP+DFDTPTEVLARAV+H AL +A LV+LFAEARFS HVMNE HRE+
Sbjct 241 ERELANVPAAAPRDFDTPTEVLARAVQHHALQADNAVQLVNLFAEARFSTHVMNEGHREL 300
Query 302 AMRLLRLVLDELS 314
A+R+LRLVLDEL+
Sbjct 301 AVRVLRLVLDELA 313
>gi|118617964|ref|YP_906296.1| hypothetical protein MUL_2480 [Mycobacterium ulcerans Agy99]
gi|118570074|gb|ABL04825.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=326
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/313 (57%), Positives = 222/313 (71%), Gaps = 5/313 (1%)
Query 6 PGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALI 65
PG DKPTGRVV +IVLL+L AALRG+LP DDG SR AL+F++A L+ ++AL+
Sbjct 2 PGIDKPTGRVVALIVLLILVAAALRGYLPDDDGTSHTEPATSRPALVFVIAVLSGSVALM 61
Query 66 ALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVP 125
A AII RLR P VAPSAG+L+ MLGG R +WRVLL+GL I A+LL+ +LL+RLF P
Sbjct 62 AFAIIARLRDPRAVAPSAGDLAQMLGGGHRRTSWRVLLIGLAVIAAYLLLTLLLSRLFTP 121
Query 126 DDVGPAAPIPDSTA---TPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGSLI 182
D+V P+AP D T D + QP D+N + L IL A+T L L ++A +
Sbjct 122 DEVAPSAPASDPGVPAPTGDGAPRPQQPQQP-SDDNINTLEILLAATAPLLLTILAAVAV 180
Query 183 TSRRQRKSAPARISGDRI-ESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVAM 241
RR+ ++ + D ESP P RS+ L RAA++GLAEMADL R+PREAIIACY AM
Sbjct 181 LWRRRWRAETSNTHTDVAGESPEPPQRSQLLVRAAKVGLAEMADLERDPREAIIACYAAM 240
Query 242 ERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREV 301
EREL++VP AP+DFDTPTEVLARAV+H AL +A LV+LFAEARFS HVMNE HRE+
Sbjct 241 ERELANVPAAAPRDFDTPTEVLARAVQHHALQADNAVQLVNLFAEARFSTHVMNEGHREL 300
Query 302 AMRLLRLVLDELS 314
A+R+LRLVLDEL+
Sbjct 301 AVRVLRLVLDELA 313
>gi|254776475|ref|ZP_05217991.1| hypothetical protein MaviaA2_17649 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=179
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/162 (67%), Positives = 128/162 (80%), Gaps = 0/162 (0%)
Query 156 DNNDDVLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISGDRIESPAPSARSESLARA 215
D + D LGIL A T+ + LMVVA ++ +RR+ +S + + E+PAP SESLARA
Sbjct 16 DGSQDTLGILLAGTVAILLMVVASAVAGARRRWRSPAPAVPDEPAENPAPQPHSESLARA 75
Query 216 AEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGA 275
AE GLAEMADLRR+PREAIIACY AMEREL+HVPG PQDFDTP+EVLARAVEH ALH
Sbjct 76 AERGLAEMADLRRDPREAIIACYAAMERELAHVPGAVPQDFDTPSEVLARAVEHHALHAD 135
Query 276 SAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRT 317
+A LV+LF EARFSPHVMNE HR+VA+R+LRLVLDEL +R+
Sbjct 136 NAVQLVNLFTEARFSPHVMNEGHRDVAVRVLRLVLDELGSRS 177
>gi|108797132|ref|YP_637329.1| hypothetical protein Mmcs_0152 [Mycobacterium sp. MCS]
gi|119866217|ref|YP_936169.1| hypothetical protein Mkms_0161 [Mycobacterium sp. KMS]
gi|108767551|gb|ABG06273.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692306|gb|ABL89379.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=320
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/316 (44%), Positives = 187/316 (60%), Gaps = 7/316 (2%)
Query 6 PGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALI 65
PG+DK T R V VIVL++LAG ALRG +P + A +L+ ++ L ++A+I
Sbjct 2 PGADKATARTVTVIVLILLAGVALRGRIPGAEPAADEPTDSGPGSLIAVLVMLGLSMAVI 61
Query 66 ALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVP 125
A++++++ RHP+ +A + GG R WR++L+ +G +L WLL+ + L R+
Sbjct 62 AVSVVSQARHPVTRPGTAADPPRFRGGDGARFTWRMVLVMVGALLVWLLVVLTLMRISGW 121
Query 126 DDVGPAAPIPDSTATPDASSTTPSRPQPPQDN------NDDVLGILFASTIGLFLMVVAG 179
DV P S SS+ PP ++ VLG A+ L+ V G
Sbjct 122 LDVSVDPPAAPSPDPDPGSSSAADSEPPPPPPDSEPPVSNAVLGYFAAAAALFVLLSVIG 181
Query 180 SLITSRRQRKSAPARISGDRIESPAPS-ARSESLARAAEIGLAEMADLRREPREAIIACY 238
+ +R+ A + D + APS +R++SLARAAE GL E+ DL REPREAIIACY
Sbjct 182 VMAGRNARRRPATVVATDDEGDGDAPSTSRTQSLARAAERGLIEIGDLSREPREAIIACY 241
Query 239 VAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEH 298
AMEREL PG PQD DTPTEVLARAV+ R LHG SA LV LF EARFS HVM E+H
Sbjct 242 AAMERELGKSPGAMPQDSDTPTEVLARAVDRRLLHGESATELVDLFEEARFSAHVMGEDH 301
Query 299 REVAMRLLRLVLDELS 314
R+ A+R+LRLVL EL
Sbjct 302 RDAAVRVLRLVLRELQ 317
>gi|126432755|ref|YP_001068446.1| hypothetical protein Mjls_0142 [Mycobacterium sp. JLS]
gi|126232555|gb|ABN95955.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=327
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/318 (44%), Positives = 192/318 (61%), Gaps = 9/318 (2%)
Query 5 KPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLAL 64
+PG+DK T R V VIVL++LAG ALRG +P + A +L+ ++ L ++A+
Sbjct 8 EPGADKATARTVAVIVLILLAGVALRGRIPGAEPAADKPTDAGPGSLIAVLVMLGLSMAV 67
Query 65 IALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFV 124
IA++++++ RHP+ +A + GG WR++L+ +G +L WLL+ + L R+
Sbjct 68 IAVSVVSQARHPVTRPATAADPPRFRGGEGAPFTWRMVLVMVGALLVWLLVVLTLMRISG 127
Query 125 PDDVG---PAAPIPD----STATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVV 177
DV PAAP P+ S++ D+ P P +N + A+ + + L V+
Sbjct 128 WLDVSVDQPAAPSPEPDPGSSSAADSEPPPPPPGSEPPVSNAALGYFAAAAALFVLLSVI 187
Query 178 AGSLITSRRQRKSAPARISGDRIESPAPS-ARSESLARAAEIGLAEMADLRREPREAIIA 236
G++ +R+ + D + APS +R++SLARAAE GL E+ DL REPREAIIA
Sbjct 188 -GAMAGRNARRRPTTVVATDDEGDDDAPSTSRTQSLARAAERGLIEIGDLSREPREAIIA 246
Query 237 CYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNE 296
CY AMEREL PG PQD DTPTEVLARAV+ R LHG SA LV LF EARFS HVM E
Sbjct 247 CYAAMERELGKSPGAMPQDSDTPTEVLARAVDRRLLHGESATELVDLFEEARFSTHVMGE 306
Query 297 EHREVAMRLLRLVLDELS 314
HR+ A+R+LRLVL EL
Sbjct 307 AHRDAAVRVLRLVLRELQ 324
>gi|333990619|ref|YP_004523233.1| hypothetical protein JDM601_1979 [Mycobacterium sp. JDM601]
gi|333486587|gb|AEF35979.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=333
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/320 (45%), Positives = 183/320 (58%), Gaps = 9/320 (2%)
Query 5 KPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLAL 64
+ G+D TGRV+ +IVL++ AGAA RG++P P A A + + A LA ++
Sbjct 16 RAGADTATGRVIALIVLVLAAGAATRGYVPGVAHDPRRPAEAGPVAQLILAALLAVSVGA 75
Query 65 IALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFV 124
+A+A+ R R S GELS +G G+P WRVLL+GL + AWLL +++ RL
Sbjct 76 VAVAVAQRARDRRAPPGSIGELSRTVGAHRGQPAWRVLLIGLAVLTAWLLAVVVMVRLGA 135
Query 125 PDD-------VGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVV 177
+G P S A DA + P P P LG L T GL +++
Sbjct 136 AHRFSIPAGLLGTRGEAPTSPAGADAPAPVPLHPPPLGAAGAP-LGYLLVLTAGLLVLIA 194
Query 178 AGSLITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIAC 237
A L+ R+ SA +I+ + ESLARAAE+GL +AD REPREAIIAC
Sbjct 195 AMLLVARARRATSAAPQINPAPAAAQP-PTAGESLARAAELGLTRIADRSREPREAIIAC 253
Query 238 YVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEE 297
Y MER L+ VP AP++FDTPTEVLARAVEH AL +A LV LF EARFSPH+M E
Sbjct 254 YAVMERHLADVPDAAPREFDTPTEVLARAVEHHALPADNAPRLVELFTEARFSPHLMTEA 313
Query 298 HREVAMRLLRLVLDELSTRT 317
HR A+ +LRLVLDEL RT
Sbjct 314 HRAEAVAILRLVLDELRART 333
>gi|118468107|ref|YP_888160.1| hypothetical protein MSMEG_3869 [Mycobacterium smegmatis str.
MC2 155]
gi|118169394|gb|ABK70290.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=309
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/311 (40%), Positives = 164/311 (53%), Gaps = 6/311 (1%)
Query 6 PGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALI 65
PG GRV V+VL+++A ALRGH+P A A S A + + A L LA
Sbjct 2 PGLQNAAGRVATVLVLMVVAVVALRGHVPGGSRAQAQAPTDSPATFVAVAALLTVGLAGF 61
Query 66 ALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVP 125
A AI T R P A L G R WR +LLGL ++ WL +A+L++RL
Sbjct 62 AFAIFTAPRKPRVSGAGDDIPQAGLRGPRARLRWRWVLLGLAVLMCWLSVAVLISRL--- 118
Query 126 DDVGPAAPIPDSTATPDASSTTPSRPQPPQDNND-DVLGILFASTIGLFLMVVAGSLITS 184
D P D + S P + P D D +L + + + L++ G+++ +
Sbjct 119 TDTSELPPPQDGSGR--ESPGAPGEARVPDDPGDATAFRLLAVAGVIMLLLIAIGTILRA 176
Query 185 RRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVAMERE 244
RR+ + R P E L RA E+GLAE+ DL R+PR AIIACY AME+
Sbjct 177 RRRAAAHLHRADDTWPVLPVHPRNPEKLVRATELGLAEIGDLSRDPRTAIIACYAAMEQG 236
Query 245 LSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREVAMR 304
L++ P PQ+ DTP+EVLARAVEH AL+ SA LV LFAEARFSPH M E HR A+
Sbjct 237 LAYAPEAVPQESDTPSEVLARAVEHHALNADSATELVELFAEARFSPHRMTETHRAAAVA 296
Query 305 LLRLVLDELST 315
L+ V +L +
Sbjct 297 ALQRVHADLRS 307
>gi|145221082|ref|YP_001131760.1| hypothetical protein Mflv_0478 [Mycobacterium gilvum PYR-GCK]
gi|145213568|gb|ABP42972.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=318
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/326 (42%), Positives = 179/326 (55%), Gaps = 32/326 (9%)
Query 4 TKPGSDKPTGRVVVVIVLLMLAGAALRGHLP-ADDGAP----LAAAGGSRAALMFIVAAL 58
T PG + R + VIVL+ +A ALRG+LP A + P L + GS + +VA L
Sbjct 5 TGPGDHRAVVRTIAVIVLIAVALVALRGYLPEASEPRPEPERLDSGSGS---VAAVVAML 61
Query 59 AATLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAIL 118
A +LA IA++++ + R + PSA E R WR LL+ +LAW ++ +L
Sbjct 62 AVSLAAIAISVLAQARQRSGI-PSAAEPHRAPRAGPLRLRWRPLLIAAAILLAWSVVLLL 120
Query 119 LARLFVPDDVGPAAPIPDSTATPDASSTTPSR-------PQPPQDN-NDDVLGILFASTI 170
L R P P+ + A AS+T P+ P P Q D V GIL +T+
Sbjct 121 LMRWVSP------LPLDEPPAPQGASATDPAEGAEPGPAPAPRQTGAGDSVFGILAVATV 174
Query 171 GLFLMVVAGSLITSRRQRKSAPARISGDRIESPAPSARS---ESLARAAEIGLAEMADLR 227
L + V G+L R R+ PA +E+P+ + L RAAE+GLAE+ D
Sbjct 175 VLLGLSVVGTL----RGRRQIPA--PAVPVEAPSDATTGGAGPDLVRAAELGLAEVDDPN 228
Query 228 REPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEA 287
R+ REAIIACY+AMEREL PG PQD DTP+EVLARA H AL SAA LV LF E
Sbjct 229 RDAREAIIACYLAMERELEKSPGTTPQDSDTPSEVLARATRHHALQADSAAELVDLFEET 288
Query 288 RFSPHVMNEEHREVAMRLLRLVLDEL 313
RFSPHVM++ HR A+R L+ VL +L
Sbjct 289 RFSPHVMDDGHRVAAVRALQAVLRDL 314
>gi|120401206|ref|YP_951035.1| hypothetical protein Mvan_0178 [Mycobacterium vanbaalenii PYR-1]
gi|119954024|gb|ABM11029.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=315
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/287 (41%), Positives = 152/287 (53%), Gaps = 7/287 (2%)
Query 30 RGHLPADDGA--PLAAAGGSRAALMFIVAALAATLALIALAIITRLRHPLPVAPSAGELS 87
RG+LP D A P +L+ + A LA ++ +IA++I+ + RH LP G +
Sbjct 31 RGYLPDGDRAAPPDERPESGTGSLVAVAAMLAVSIGIIAISILAQGRHRLPAPDQGGPVR 90
Query 88 AMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDSTATPDASSTT 147
+ G WR LL+ +L W ++ +LL R P V A P +
Sbjct 91 DLREPWPGL-RWRPLLIAAAALLVWSVLMLLLMRWASPGVVDDAPPPAPGADARAETDRG 149
Query 148 PSRPQPPQDNNDDVLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISGDRIESPAPSA 207
P+ P D V +L +TI L + VA +L+ RR P +PA
Sbjct 150 PAPQTPTGDGGGSVFVLLAGTTILLLALSVAATLLGRRRAPAPPPPVDPATVGTTPA--- 206
Query 208 RSESLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAV 267
LARAAE+GLAEM DL R+PR+AIIACY+AMEREL PG PQ+ DTP+EVLARA+
Sbjct 207 -EPDLARAAELGLAEMGDLSRDPRQAIIACYLAMERELEKSPGTIPQESDTPSEVLARAI 265
Query 268 EHRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELS 314
E AL + LV LF EARFSPHVMNE HR A+R LR V +L
Sbjct 266 ERHALRADTGIELVDLFEEARFSPHVMNEGHRADAVRALRQVQHQLQ 312
>gi|169628999|ref|YP_001702648.1| hypothetical protein MAB_1911c [Mycobacterium abscessus ATCC
19977]
gi|169240966|emb|CAM61994.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=305
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/318 (35%), Positives = 158/318 (50%), Gaps = 24/318 (7%)
Query 7 GSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRA-----ALMFIVAALAAT 61
G+D+P R +IVL+ L+ ALR +LP D A L RA AL ++ + +
Sbjct 3 GADRPLLRATGLIVLIALSVVALRSYLP--DAAALPPPEKPRAQPHSNALQLLLCGVVSI 60
Query 62 LALIALAIITRLRHPLPVA-PSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA 120
L L++L R PLP P L A+ R ++ T+L +L+ +
Sbjct 61 LILVSLRR-QRPNMPLPQENPPYLRLPAL--------TRREAIIAAATVL--VLMGGVWT 109
Query 121 RLFV--PDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVA 178
L++ P GP +A P P P P + ++ +G+ L+ +A
Sbjct 110 ALYLSGPAGEGPVREPASRSAEPTRPGAEPPAPGKPSPRRYSEVPMMI---LGVVLVGIA 166
Query 179 GSLITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACY 238
++ RR AP +G E A SL E+GLAE+A+ R+PR AIIACY
Sbjct 167 AAVFVLRRHEPDAPDGSTGQPAEPDATPTTPRSLVHLVELGLAEVAEPGRDPRAAIIACY 226
Query 239 VAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEH 298
AME+ L+ P AP + DTP+EVL RAV AL + LVSLF+EARFSPH M + H
Sbjct 227 AAMEQGLTAAPEAAPLESDTPSEVLQRAVHIGALQSQAGTQLVSLFSEARFSPHEMTQAH 286
Query 299 REVAMRLLRLVLDELSTR 316
R+ A R L+ V+D+L +R
Sbjct 287 RQSAARWLQDVVDDLRSR 304
>gi|111021497|ref|YP_704469.1| hypothetical protein RHA1_ro04525 [Rhodococcus jostii RHA1]
gi|110821027|gb|ABG96311.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=324
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/221 (44%), Positives = 123/221 (56%), Gaps = 19/221 (8%)
Query 109 ILAW-LLIAILLARLFVPDDVGPAAPI--PDSTATP---------DASSTTPSRPQPP-- 154
IL W A+L+ F+ VG P+ STA+P DAS T +RP P
Sbjct 98 ILGWSAFAALLVTAAFLLGSVGGDEPLDRQRSTASPTTDDGADRTDASVPTDTRPPPDMV 157
Query 155 QDNNDDVLGILFASTI-GLFLMVVAGSLITSRRQRKSAPARISG-DRIESPAPSARSESL 212
++ +D+ + A+ I G L+ V LI R+ AR+ G SP A S+SL
Sbjct 158 NESREDLAELWTAAAIVGPILVTV---LILGAVARRPLRARVGGWTAASSPDGPAASQSL 214
Query 213 ARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRAL 272
ARAAE GLA + PREAIIA Y AME L PG P++ DTP+EVLARAV+ AL
Sbjct 215 ARAAEEGLAVVVAPSLPPREAIIASYAAMENALREAPGAEPRESDTPSEVLARAVQFGAL 274
Query 273 HGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDEL 313
+AA LV LF+EARFS H M E+HR+ A LLR VLD+L
Sbjct 275 RFEAAAPLVRLFSEARFSLHPMGEQHRDEAADLLRRVLDDL 315
>gi|54022421|ref|YP_116663.1| hypothetical protein nfa4570 [Nocardia farcinica IFM 10152]
gi|54013929|dbj|BAD55299.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=323
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/139 (54%), Positives = 89/139 (65%), Gaps = 7/139 (5%)
Query 176 VVAGSLITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAII 235
++A +L T RR R++ +E+PAP A SLARAAE+GLA M ++PR AII
Sbjct 183 LLAVALATRRRARETV-------LVEAPAPPAEVGSLARAAEMGLAAMNAPGQDPRTAII 235
Query 236 ACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMN 295
ACYVAMER L+ AP DTP EVLARA E ALH SA LV+LF EARFSPH M
Sbjct 236 ACYVAMERGLASGRAAAPLASDTPMEVLARAFERGALHDTSARELVALFEEARFSPHAML 295
Query 296 EEHREVAMRLLRLVLDELS 314
E R A +LLR+VL +L
Sbjct 296 EWQRMRAEQLLRVVLADLQ 314
>gi|226363850|ref|YP_002781632.1| hypothetical protein ROP_44400 [Rhodococcus opacus B4]
gi|226242339|dbj|BAH52687.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=326
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/173 (45%), Positives = 99/173 (58%), Gaps = 9/173 (5%)
Query 149 SRPQPPQDN----NDDVLGILFASTI-GLFLMVVAGSLITSRRQRKSAPARISG-DRIES 202
+ P PP D +D+ + A+ I G L+ V LI R+ +R+ S
Sbjct 150 TEPAPPPDTVAETREDLAELWTAAAIVGPILVTV---LILGAVARRPLRSRVGAWTAASS 206
Query 203 PAPSARSESLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEV 262
P A ++SLARAAE GLA + PREAIIA Y AME L PG P+D DTP+EV
Sbjct 207 PDAPAGTQSLARAAEEGLAVVVAPGLPPREAIIASYAAMEDALRAAPGAEPRDSDTPSEV 266
Query 263 LARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELST 315
LARAV+ AL +AA LV LF+EARFS H M E HR+ A LLR VL+++ +
Sbjct 267 LARAVQLGALRFEAAAPLVRLFSEARFSLHPMGEHHRDEAADLLRRVLEDVGS 319
>gi|333918365|ref|YP_004491946.1| hypothetical protein AS9A_0692 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480586|gb|AEF39146.1| hypothetical protein AS9A_0692 [Amycolicicoccus subflavus DQS3-9A1]
Length=319
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/223 (33%), Positives = 109/223 (49%), Gaps = 9/223 (4%)
Query 91 GGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDSTATPDASSTTPSR 150
GG A +WR ++L L A ++ + + R F P ++ I + D P
Sbjct 97 GGQARDRDWRAIVLFLLYFAAITVLFVWINRFFGPREMA----IENGDDKLDEGE--PLE 150
Query 151 PQPPQDNNDDVLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISGDRIESPAPSARSE 210
PP + D+ L S + L +++ G++++ R +R + +E PA +
Sbjct 151 TLPPAPDGPDISPFLLTSLLILVVLLTVGAILSMRGRRSRQTTTFT---LERPAQHRHAA 207
Query 211 SLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHR 270
LA AAE L ++ +PR AIIACY ME L+ AP + DTP+EVLARAV
Sbjct 208 DLADAAERALDAISKPAHDPRAAIIACYAEMEEALTEADEPAPLESDTPSEVLARAVALG 267
Query 271 ALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDEL 313
+ A LV LFAEAR+S H M + A LLR +LD++
Sbjct 268 YVTRGPAEELVGLFAEARYSSHTMTAGQQRTAAELLRSLLDDV 310
>gi|2326703|emb|CAB11016.1| hypothetical protein MLCB1779.35c [Mycobacterium leprae]
Length=119
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/99 (49%), Positives = 60/99 (61%), Gaps = 3/99 (3%)
Query 77 LPVAPSAGELSA--MLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPI 134
L +A AGELS M GG RP W VLL GL I+AWLLI ILLA LF P +V P+A I
Sbjct 22 LALATRAGELSDIDMHGGGTTRPTWSVLLNGLAVIVAWLLIVILLAWLFAPHNVNPSASI 81
Query 135 PDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLF 173
DS+ P T + P+ Q + D++GIL AS + +F
Sbjct 82 TDSSV-PLVVQDTETPPKQLQHDTGDMVGILRASAVPMF 119
>gi|254168061|ref|ZP_04874909.1| hypothetical protein ABOONEI_208 [Aciduliprofundum boonei T469]
gi|289596024|ref|YP_003482720.1| hypothetical protein Aboo_0347 [Aciduliprofundum boonei T469]
gi|197623104|gb|EDY35671.1| hypothetical protein ABOONEI_208 [Aciduliprofundum boonei T469]
gi|289533811|gb|ADD08158.1| hypothetical protein Aboo_0347 [Aciduliprofundum boonei T469]
Length=273
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/87 (36%), Positives = 47/87 (55%), Gaps = 1/87 (1%)
Query 228 REPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEA 287
++ R AI+A Y ME+ L GV +D+ TP E A++ + L +LF A
Sbjct 187 KDVRGAILAAYKEMEK-LMRSKGVEDKDYYTPREFREFALKTLKISSKPVETLTNLFEIA 245
Query 288 RFSPHVMNEEHREVAMRLLRLVLDELS 314
R+S H MNE HR++A+ L + +E S
Sbjct 246 RYSQHEMNENHRKLALNALEAIRNETS 272
>gi|254168157|ref|ZP_04875004.1| hypothetical protein ABOONEI_774 [Aciduliprofundum boonei T469]
gi|197622923|gb|EDY35491.1| hypothetical protein ABOONEI_774 [Aciduliprofundum boonei T469]
Length=273
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/87 (36%), Positives = 47/87 (55%), Gaps = 1/87 (1%)
Query 228 REPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEA 287
++ R AI+A Y ME+ L GV +D+ TP E A++ + L +LF A
Sbjct 187 KDVRGAILAAYKEMEK-LMRSKGVEDKDYYTPREFREFALKTLKISSKPVETLTNLFEIA 245
Query 288 RFSPHVMNEEHREVAMRLLRLVLDELS 314
R+S H MNE HR++A+ L + +E S
Sbjct 246 RYSQHEMNENHRKLALNALEAIRNETS 272
>gi|238062762|ref|ZP_04607471.1| hypothetical protein MCAG_03728 [Micromonospora sp. ATCC 39149]
gi|237884573|gb|EEP73401.1| hypothetical protein MCAG_03728 [Micromonospora sp. ATCC 39149]
Length=247
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/187 (30%), Positives = 86/187 (46%), Gaps = 26/187 (13%)
Query 148 PSRPQPPQDNND-------DVLGILFASTIGLFLMVVAGSLITS------RRQRKSAPAR 194
PS P P+D + + LG + + +GL + V G L + RR ++ P
Sbjct 58 PSIPVEPRDAGEATRAHIPEWLGTVVVALLGLAIAVALGYLAWTLIRGAARRTTRALPV- 116
Query 195 ISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQ 254
DR A E +A A + GL E+ D +PR A+IAC+V +E E + GVA
Sbjct 117 ---DRARRTAEGTAREVVA-ALDAGLVELDDADVDPRTAVIACWVRLE-EAADAAGVARL 171
Query 255 DFDTPTEVLARAVEHRALHGASA-------AALVSLFAEARFSPHVMNEEHREVAMRLLR 307
DTPT+++ R + G A A ++ EAR++ ++E R+ A LR
Sbjct 172 TGDTPTDLVTRLLRGDPDAGVPAIVSADVLAEFAHVYREARYATRPVDERTRDQARAALR 231
Query 308 LVLDELS 314
+ EL+
Sbjct 232 RLRGELT 238
>gi|21224463|ref|NP_630242.1| transmembrane protein [Streptomyces coelicolor A3(2)]
gi|4160332|emb|CAA22803.1| putative transmembrane protein [Streptomyces coelicolor A3(2)]
Length=339
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/104 (37%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query 215 AAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHG 274
A + G +A + R A+IACY AME L+ GV D+P ++L RA G
Sbjct 229 AVDSGRRALAGTDDDARAAVIACYAAMEDALA-ASGVPRHASDSPADLLTRAAGTGFAPG 287
Query 275 ASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRTA 318
+A L +LF EAR+S H M+ HR+ A L + L R A
Sbjct 288 PAAPRLTALFREARYSSHPMDGSHRKAAADALEEIASLLRDRDA 331
>gi|289768224|ref|ZP_06527602.1| transmembrane protein [Streptomyces lividans TK24]
gi|289698423|gb|EFD65852.1| transmembrane protein [Streptomyces lividans TK24]
Length=339
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/104 (37%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query 215 AAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHG 274
A + G +A + R A+IACY AME L+ GV D+P ++L RA G
Sbjct 229 AVDSGRRALAGTDDDARAAVIACYAAMEDALA-ASGVPRHASDSPADLLTRAAGTGFAPG 287
Query 275 ASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRTA 318
+A L +LF EAR+S H M+ HR+ A L + L R A
Sbjct 288 PAAPRLTALFREARYSSHPMDGSHRKAAADALEEIASLLRDRDA 331
>gi|302865406|ref|YP_003834043.1| hypothetical protein Micau_0903 [Micromonospora aurantiaca ATCC
27029]
gi|302568265|gb|ADL44467.1| hypothetical protein Micau_0903 [Micromonospora aurantiaca ATCC
27029]
Length=243
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/154 (32%), Positives = 75/154 (49%), Gaps = 17/154 (11%)
Query 170 IGLFLM-VVAGSLITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRR 228
+G L V+ G+L RR ++ P R R A E +A A + GL E+ D
Sbjct 93 VGYVLWNVLRGAL---RRTTRAVPVR----RTRRTAEGTAREVVA-ALDAGLVELDDRST 144
Query 229 EPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAA-------LV 281
+PR A+IAC+V +E E + GV DTPT+++ R + G A A
Sbjct 145 DPRTAVIACWVRLE-EAAEDAGVPRHTGDTPTDLVGRLLRGDPAAGIPAIASADVLDGFA 203
Query 282 SLFAEARFSPHVMNEEHREVAMRLLRLVLDELST 315
++ EAR++ H ++E R+ A LR + EL++
Sbjct 204 HVYREARYATHPVDEHTRDQARAALRRLRGELTS 237
>gi|315501951|ref|YP_004080838.1| hypothetical protein ML5_1147 [Micromonospora sp. L5]
gi|315408570|gb|ADU06687.1| hypothetical protein ML5_1147 [Micromonospora sp. L5]
Length=243
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/154 (32%), Positives = 75/154 (49%), Gaps = 17/154 (11%)
Query 170 IGLFLM-VVAGSLITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRR 228
+G L V+ G+L RR ++ P R R A E +A A + GL E+ D
Sbjct 93 VGYVLWNVLRGAL---RRTTRAVPVR----RTRRTAEGTAREVVA-ALDAGLVELDDRST 144
Query 229 EPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAA-------LV 281
+PR A+IAC+V +E E + GV DTPT+++ R + G A A
Sbjct 145 DPRTAVIACWVRLE-EAAEDAGVPRHTGDTPTDLVGRLLRGDPAAGIPAIASADVLDGFA 203
Query 282 SLFAEARFSPHVMNEEHREVAMRLLRLVLDELST 315
++ EAR++ H ++E R+ A LR + EL++
Sbjct 204 HVYREARYATHPVDEHTRDQARAALRRLRGELTS 237
>gi|256392264|ref|YP_003113828.1| hypothetical protein Caci_3078 [Catenulispora acidiphila DSM
44928]
gi|256358490|gb|ACU71987.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=330
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/107 (38%), Positives = 51/107 (48%), Gaps = 2/107 (1%)
Query 210 ESLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEH 269
+ LA A G E + + REA+IACY AME ++ G + DTP E L R
Sbjct 190 DQLAEAVAAG-TEALEYEGDAREAVIACYSAMEVAVT-AGGGGRRATDTPEEFLRRVTAA 247
Query 270 RALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTR 316
+ G A L LF EARFS H + EE R+ A L + L R
Sbjct 248 NLIPGEPARRLTELFREARFSRHPIAEEKRDAAREALSAISLHLQGR 294
>gi|291299105|ref|YP_003510383.1| hypothetical protein Snas_1587 [Stackebrandtia nassauensis DSM
44728]
gi|290568325|gb|ADD41290.1| hypothetical protein Snas_1587 [Stackebrandtia nassauensis DSM
44728]
Length=234
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/110 (33%), Positives = 65/110 (60%), Gaps = 4/110 (3%)
Query 188 RKSAPARISG-DRIESPAPSA-RSESLARAAEIGLAEMADLRREPREAIIACYVAMEREL 245
R+ R SG DR+E A S + L A GL+++ D +PR+A+IAC++ +ER
Sbjct 100 RRFLTTRPSGWDRVEDRAASQPDAGELRDALRAGLSDI-DAGGDPRKAVIACWLRLERAA 158
Query 246 SHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMN 295
+ V GVA + +TP++++ R + + + +ALV+ + AR++PH ++
Sbjct 159 ADV-GVARLESETPSDLVGRVLSASRVDDGALSALVAAYHRARYAPHDVD 207
>gi|167043243|gb|ABZ07950.1| putative transglutaminase-like superfamily protein [uncultured
marine microorganism HF4000_ANIW141L21]
Length=2660
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 47/149 (32%), Positives = 70/149 (47%), Gaps = 19/149 (12%)
Query 165 LFASTIGLFLMVVAGSLITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMA 224
L+A + + L VVAG+L+ RR+R++A +S S +E LA E+
Sbjct 2513 LYALVVLIVLGVVAGALVLVRRRRQAAIDELSS------VFSYTAELLAAGDEV------ 2560
Query 225 DLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLF 284
REAI CY ++ + L G +DF+T E + + AL +F
Sbjct 2561 ------REAIFNCYESLCQILMR-RGFLRRDFETVREFEMAIRNALPISEQALVALDRIF 2613
Query 285 AEARFSPHVMNEEHREVAMRLLRLVLDEL 313
EAR+S HV+ E HR+ A L VL E+
Sbjct 2614 EEARYSSHVLGEPHRQNAQMALSTVLQEI 2642
>gi|330465822|ref|YP_004403565.1| hypothetical protein VAB18032_09235 [Verrucosispora maris AB-18-032]
gi|328808793|gb|AEB42965.1| hypothetical protein VAB18032_09235 [Verrucosispora maris AB-18-032]
Length=242
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/107 (32%), Positives = 55/107 (52%), Gaps = 8/107 (7%)
Query 215 AAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHG 274
A + GL E+ D +PR A+IAC+V +E E + GV DTPT+++ R + G
Sbjct 129 AVDAGLVELDDRSTDPRTAVIACWVRLE-EAAAAAGVPRLTGDTPTDLVTRLLRGDPSAG 187
Query 275 ASA-------AALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELS 314
A A +++ EAR++ ++E R+ A LR + EL+
Sbjct 188 VPAIVSADVLAEFANVYREARYATRPVDEHTRDQARAALRRLRGELA 234
>gi|317124513|ref|YP_004098625.1| hypothetical protein Intca_1382 [Intrasporangium calvum DSM 43043]
gi|315588601|gb|ADU47898.1| hypothetical protein Intca_1382 [Intrasporangium calvum DSM 43043]
Length=260
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (35%), Positives = 45/84 (54%), Gaps = 1/84 (1%)
Query 230 PREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARF 289
PR A++A +VA+E+ + G+ +T TE + R + + S L +LF EARF
Sbjct 148 PRNAVVAAWVALEQSAAGA-GLPRHVAETSTEYVGRVLAVWDVDARSLDDLAALFREARF 206
Query 290 SPHVMNEEHREVAMRLLRLVLDEL 313
S H + E HRE A+ L + +L
Sbjct 207 STHPLTEPHRERAIAALTTIRSDL 230
>gi|84494290|ref|ZP_00993409.1| hypothetical protein JNB_05829 [Janibacter sp. HTCC2649]
gi|84383783|gb|EAP99663.1| hypothetical protein JNB_05829 [Janibacter sp. HTCC2649]
Length=225
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (33%), Positives = 45/83 (55%), Gaps = 1/83 (1%)
Query 232 EAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSP 291
EA+I ++ +ER V G+ TP E++ + + + L +L+ EARFS
Sbjct 132 EAVINAWLTLERTAITV-GIDDDQSRTPAELVTAVLNEYDVDQGAIERLAALYREARFSR 190
Query 292 HVMNEEHREVAMRLLRLVLDELS 314
H++ EEHRE A +R V ++L+
Sbjct 191 HLIGEEHREAARAAVRQVREDLT 213
>gi|145593458|ref|YP_001157755.1| hypothetical protein Strop_0900 [Salinispora tropica CNB-440]
gi|145302795|gb|ABP53377.1| hypothetical protein Strop_0900 [Salinispora tropica CNB-440]
Length=260
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (31%), Positives = 54/107 (51%), Gaps = 8/107 (7%)
Query 215 AAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHG 274
A + GL ++ D +PR +IAC+V +E E + GV DTPTE++ R + + G
Sbjct 144 ALDAGLVDLDDTGTDPRTVVIACWVRLE-EAAAGAGVRQLTGDTPTELVVRLLRGDPVAG 202
Query 275 ASA-------AALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELS 314
A A ++ EAR++ ++E R+ A LR + EL+
Sbjct 203 VPAIASADVLADFAHVYREARYATRPVDERTRDQARAALRRLRGELT 249
>gi|291336365|gb|ADD95922.1| putative transglutaminase-like superfamily protein [uncultured
organism MedDCM-OCT-S04-C1]
Length=1864
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 33/93 (36%), Positives = 46/93 (50%), Gaps = 8/93 (8%)
Query 231 REAIIACYVAMERELSHV---PGVAPQDFDTPTEV-LARAVEHRALHGASAAALVSLFAE 286
REAI CY L H+ G +DF+T E +A L S AL S+F E
Sbjct 1773 REAIFQCY----ESLVHILMGRGFLRRDFETVREFEMAIRAALPQLSDESLNALDSIFEE 1828
Query 287 ARFSPHVMNEEHREVAMRLLRLVLDELSTRTAI 319
AR+S H M+E H+ A L V++E++ + I
Sbjct 1829 ARYSRHEMSEAHKANAQEALTRVVNEVNQFSDI 1861
>gi|159036499|ref|YP_001535752.1| hypothetical protein Sare_0843 [Salinispora arenicola CNS-205]
gi|157915334|gb|ABV96761.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length=257
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/164 (29%), Positives = 78/164 (48%), Gaps = 11/164 (6%)
Query 160 DVLGILFASTIGLFLMVVAGSLITS--RRQRKSAPARISGDRIESPAPSARSESLARAAE 217
D L + +GL ++ VAG L+ + R + + R+ ++ A E +A A +
Sbjct 88 DWLQAGVWALLGLAVLAVAGYLVWTLLRSVLRRSTRRLPAHQVSFTAEGTAREVVA-ALD 146
Query 218 IGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASA 277
GL ++ D +PR +IAC+V +E E + GV DTPTE++ R + G A
Sbjct 147 AGLVDLDDTDTDPRTVVIACWVRLE-EAAAGAGVRQLAGDTPTELVIRLLRGDPAAGVPA 205
Query 278 AA-------LVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELS 314
A ++ EAR++ ++E R+ A LR + EL+
Sbjct 206 VASADVLADFAHVYREARYATRPVDEHTRDQARVALRRLRGELT 249
>gi|284029394|ref|YP_003379325.1| hypothetical protein Kfla_1425 [Kribbella flavida DSM 17836]
gi|283808687|gb|ADB30526.1| hypothetical protein Kfla_1425 [Kribbella flavida DSM 17836]
Length=245
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/102 (36%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query 212 LARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRA 271
LA A E GLA + +A+IAC+VA+E E + GVA + +TP E R +
Sbjct 131 LAEAVETGLASVES--GTASDAVIACWVALE-EAAASAGVAREPSETPAEFTVRVLGVGG 187
Query 272 LHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDEL 313
+ L L+ EAR+S H +E+ R A L + DEL
Sbjct 188 ISEPELLRLAELYREARYSTHGSSEDARAQARAALLRLRDEL 229
>gi|119715712|ref|YP_922677.1| hypothetical protein Noca_1476 [Nocardioides sp. JS614]
gi|119536373|gb|ABL80990.1| hypothetical protein Noca_1476 [Nocardioides sp. JS614]
Length=245
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/98 (31%), Positives = 46/98 (47%), Gaps = 8/98 (8%)
Query 215 AAEIGLAEMADLRR------EPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVE 268
A EI LA+ A RR PR A++ C+ E + + ++T +E R ++
Sbjct 135 AQEI-LADAASQRRLLAEGGSPRNAVVECWHRFETQAAAAGLAR-GAWETSSEYTMRVLD 192
Query 269 HRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLL 306
H + L L+ EARFS H + E HR+ A+ L
Sbjct 193 LVDAHQPAVTRLGELYREARFSEHPLTEAHRQEALAAL 230
>gi|148655025|ref|YP_001275230.1| hypothetical protein RoseRS_0867 [Roseiflexus sp. RS-1]
gi|148567135|gb|ABQ89280.1| hypothetical protein RoseRS_0867 [Roseiflexus sp. RS-1]
Length=532
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/83 (39%), Positives = 42/83 (51%), Gaps = 6/83 (7%)
Query 225 DLRR-EPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASA--AALV 281
+LRR PRE + Y+A R + GV TP E AR RAL AS+ A L
Sbjct 426 NLRRLPPRERVRYFYLATLRRAAQC-GVERHPSQTPYEYAARL--ERALPEASSDIADLT 482
Query 282 SLFAEARFSPHVMNEEHREVAMR 304
+F A++SPH+ E+H A R
Sbjct 483 DVFITAQYSPHICTEDHVTQARR 505
>gi|291569600|dbj|BAI91872.1| two-component hybrid histidine kinase [Arthrospira platensis
NIES-39]
Length=897
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/61 (37%), Positives = 31/61 (51%), Gaps = 0/61 (0%)
Query 209 SESLARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVE 268
+E+ +RA LA M+ R P AI+ MEREL H P + D E++ R+ E
Sbjct 415 AETASRAKSEFLARMSHELRTPLNAILGFTQLMERELYHSPNIPLSDHKEHLEIIGRSGE 474
Query 269 H 269
H
Sbjct 475 H 475
>gi|170047961|ref|XP_001851471.1| ctl transporter [Culex quinquefasciatus]
gi|167870214|gb|EDS33597.1| ctl transporter [Culex quinquefasciatus]
Length=688
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/112 (31%), Positives = 49/112 (44%), Gaps = 8/112 (7%)
Query 52 MFIVAALAATLALIALAIITRLRHPLP----VAPSAGELSAMLGGAAGRPNWRVLLLGLG 107
++++A LA + +I L II LR L + AG+ L G AG P + + L
Sbjct 277 IYVLAILATCIMIILLVIIYYLREKLSGLAALFEEAGKCMIELPGLAGPP--LLACIALA 334
Query 108 TILA-WLLIAILLARLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNN 158
L W+++ + LA P+ V P P P S TP P DNN
Sbjct 335 IFLTFWVVVIVCLATSNYPN-VRPLLPFTQLKENPANVSVTPKPGDLPADNN 385
Lambda K H
0.320 0.134 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 558531753480
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40