BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3179 Length=429 Score E Sequences producing significant alignments: (Bits) Value gi|15842758|ref|NP_337795.1| hypothetical protein MT3270 [Mycoba... 869 0.0 gi|254233792|ref|ZP_04927117.1| conserved hypothetical protein [... 868 0.0 gi|15610315|ref|NP_217695.1| hypothetical protein Rv3179 [Mycoba... 867 0.0 gi|148824374|ref|YP_001289128.1| hypothetical protein TBFG_13201... 867 0.0 gi|298526654|ref|ZP_07014063.1| conserved hypothetical protein [... 866 0.0 gi|254552272|ref|ZP_05142719.1| hypothetical protein Mtube_17778... 865 0.0 gi|8515819|gb|AAF76191.1|AF271296_1 putative ATP/GTP binding pro... 761 0.0 gi|294992977|ref|ZP_06798668.1| hypothetical protein Mtub2_00340... 502 4e-140 gi|340625627|ref|YP_004744079.1| hypothetical protein MCAN_06031... 297 2e-78 gi|15607737|ref|NP_215111.1| hypothetical protein Rv0597c [Mycob... 296 3e-78 gi|289573197|ref|ZP_06453424.1| conserved hypothetical protein [... 296 4e-78 gi|306796346|ref|ZP_07434648.1| hypothetical protein TMFG_03263 ... 295 1e-77 gi|340628276|ref|YP_004746728.1| hypothetical protein MCAN_33171... 293 5e-77 gi|256389915|ref|YP_003111479.1| hypothetical protein Caci_0703 ... 280 3e-73 gi|284045327|ref|YP_003395667.1| ATPase AAA [Conexibacter woesei... 280 4e-73 gi|56459638|ref|YP_154919.1| ATPase [Idiomarina loihiensis L2TR]... 274 2e-71 gi|299133054|ref|ZP_07026249.1| conserved hypothetical protein [... 272 8e-71 gi|209544898|ref|YP_002277127.1| hypothetical protein Gdia_2779 ... 270 4e-70 gi|330467336|ref|YP_004405079.1| hypothetical protein VAB18032_1... 268 1e-69 gi|336176198|ref|YP_004581573.1| hypothetical protein FsymDg_006... 268 1e-69 gi|336116428|ref|YP_004571194.1| hypothetical protein MLP_07770 ... 267 3e-69 gi|209547117|ref|YP_002279035.1| hypothetical protein Rleg2_5079... 266 4e-69 gi|312195031|ref|YP_004015092.1| hypothetical protein FraEuI1c_1... 266 5e-69 gi|336116198|ref|YP_004570964.1| hypothetical protein MLP_05470 ... 266 7e-69 gi|238061727|ref|ZP_04606436.1| hypothetical protein MCAG_02693 ... 266 7e-69 gi|111222751|ref|YP_713545.1| hypothetical protein FRAAL3336 [Fr... 264 2e-68 gi|110632900|ref|YP_673108.1| hypothetical protein Meso_0540 [Me... 263 4e-68 gi|119357028|ref|YP_911672.1| AAA family ATPase [Chlorobium phae... 262 7e-68 gi|304311176|ref|YP_003810774.1| Predicted ATPase [gamma proteob... 261 1e-67 gi|119356615|ref|YP_911259.1| AAA family ATPase [Chlorobium phae... 261 1e-67 gi|167621599|ref|YP_001672107.1| hypothetical protein Caul_5329 ... 261 1e-67 gi|153012018|ref|YP_001373230.1| hypothetical protein Oant_4815 ... 261 1e-67 gi|323138759|ref|ZP_08073824.1| hypothetical protein Met49242DRA... 260 3e-67 gi|256830086|ref|YP_003158814.1| ATPase AAA [Desulfomicrobium ba... 257 3e-66 gi|194335302|ref|YP_002017096.1| ATPase [Pelodictyon phaeoclathr... 256 4e-66 gi|54024733|ref|YP_118975.1| hypothetical protein nfa27640 [Noca... 254 1e-65 gi|298529035|ref|ZP_07016438.1| AAA family ATPase [Desulfonatron... 254 2e-65 gi|307947366|ref|ZP_07662700.1| AAA family ATPase [Roseibium sp.... 253 6e-65 gi|85707504|ref|ZP_01038581.1| predicted ATPase (AAA+ superfamil... 252 8e-65 gi|336120953|ref|YP_004575740.1| hypothetical protein MLP_53230 ... 250 3e-64 gi|317123484|ref|YP_004097596.1| hypothetical protein Intca_0315... 250 4e-64 gi|120537108|ref|YP_957165.1| AAA family ATPase [Marinobacter aq... 247 3e-63 gi|116751278|ref|YP_847965.1| AAA family ATPase [Syntrophobacter... 247 3e-63 gi|158317994|ref|YP_001510502.1| hypothetical protein Franean1_6... 246 5e-63 gi|225155795|ref|ZP_03724282.1| conserved hypothetical protein [... 246 7e-63 gi|336177068|ref|YP_004582443.1| hypothetical protein FsymDg_101... 246 8e-63 gi|251771011|gb|EES51595.1| ATPase (AAA+ superfamily)-like prote... 244 1e-62 gi|56476325|ref|YP_157914.1| ATPase [Aromatoleum aromaticum EbN1... 244 2e-62 gi|297157562|gb|ADI07274.1| hypothetical protein SBI_04153 [Stre... 244 2e-62 gi|320450333|ref|YP_004202429.1| AAA+ super family ATPase [Therm... 243 5e-62 >gi|15842758|ref|NP_337795.1| hypothetical protein MT3270 [Mycobacterium tuberculosis CDC1551] gi|289746993|ref|ZP_06506371.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|13883082|gb|AAK47609.1| hypothetical protein MT3270 [Mycobacterium tuberculosis CDC1551] gi|289687521|gb|EFD55009.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|339296012|gb|AEJ48123.1| hypothetical protein CCDC5079_2933 [Mycobacterium tuberculosis CCDC5079] gi|339299623|gb|AEJ51733.1| hypothetical protein CCDC5180_2896 [Mycobacterium tuberculosis CCDC5180] Length=454 Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/429 (100%), Positives = 429/429 (100%), Gaps = 0/429 (0%) Query 1 VVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD 60 VVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD Sbjct 26 VVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD 85 Query 61 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT 120 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT Sbjct 86 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT 145 Query 121 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA 180 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA Sbjct 146 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA 205 Query 181 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL 240 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL Sbjct 206 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL 265 Query 241 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL 300 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL Sbjct 266 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL 325 Query 301 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPD 360 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPD Sbjct 326 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPD 385 Query 361 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL 420 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL Sbjct 386 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL 445 Query 421 WNGQSVSSL 429 WNGQSVSSL Sbjct 446 WNGQSVSSL 454 >gi|254233792|ref|ZP_04927117.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|124599321|gb|EAY58425.1| conserved hypothetical protein [Mycobacterium tuberculosis C] Length=494 Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/429 (100%), Positives = 429/429 (100%), Gaps = 0/429 (0%) Query 1 VVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD 60 VVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD Sbjct 66 VVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD 125 Query 61 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT 120 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT Sbjct 126 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT 185 Query 121 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA 180 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA Sbjct 186 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA 245 Query 181 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL 240 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL Sbjct 246 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL 305 Query 241 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL 300 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL Sbjct 306 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL 365 Query 301 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPD 360 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPD Sbjct 366 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPD 425 Query 361 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL 420 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL Sbjct 426 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL 485 Query 421 WNGQSVSSL 429 WNGQSVSSL Sbjct 486 WNGQSVSSL 494 >gi|15610315|ref|NP_217695.1| hypothetical protein Rv3179 [Mycobacterium tuberculosis H37Rv] gi|31794357|ref|NP_856850.1| hypothetical protein Mb3205 [Mycobacterium bovis AF2122/97] gi|121639065|ref|YP_979289.1| hypothetical protein BCG_3205 [Mycobacterium bovis BCG str. Pasteur 1173P2] 30 more sequence titles Length=429 Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/429 (99%), Positives = 429/429 (100%), Gaps = 0/429 (0%) Query 1 VVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD 60 +VHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD Sbjct 1 MVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD 60 Query 61 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT 120 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT Sbjct 61 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT 120 Query 121 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA 180 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA Sbjct 121 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA 180 Query 181 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL 240 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL Sbjct 181 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL 240 Query 241 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL 300 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL Sbjct 241 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL 300 Query 301 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPD 360 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPD Sbjct 301 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPD 360 Query 361 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL 420 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL Sbjct 361 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL 420 Query 421 WNGQSVSSL 429 WNGQSVSSL Sbjct 421 WNGQSVSSL 429 >gi|148824374|ref|YP_001289128.1| hypothetical protein TBFG_13201 [Mycobacterium tuberculosis F11] gi|253800214|ref|YP_003033215.1| hypothetical protein TBMG_03223 [Mycobacterium tuberculosis KZN 1435] gi|289555453|ref|ZP_06444663.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|148722901|gb|ABR07526.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|253321717|gb|ACT26320.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289440085|gb|EFD22578.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|328459951|gb|AEB05374.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length=454 Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/429 (99%), Positives = 429/429 (100%), Gaps = 0/429 (0%) Query 1 VVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD 60 VVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD Sbjct 26 VVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD 85 Query 61 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT 120 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT Sbjct 86 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT 145 Query 121 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA 180 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA Sbjct 146 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA 205 Query 181 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL 240 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL Sbjct 206 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL 265 Query 241 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL 300 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL Sbjct 266 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL 325 Query 301 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPD 360 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDL+HFRDRDGREIDCILQTPD Sbjct 326 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLHHFRDRDGREIDCILQTPD 385 Query 361 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL 420 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL Sbjct 386 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL 445 Query 421 WNGQSVSSL 429 WNGQSVSSL Sbjct 446 WNGQSVSSL 454 >gi|298526654|ref|ZP_07014063.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308232362|ref|ZP_07415834.2| hypothetical protein TMAG_03641 [Mycobacterium tuberculosis SUMu001] gi|308370176|ref|ZP_07420559.2| hypothetical protein TMBG_01872 [Mycobacterium tuberculosis SUMu002] 24 more sequence titles Length=428 Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/428 (99%), Positives = 428/428 (100%), Gaps = 0/428 (0%) Query 2 VHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDV 61 +HDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDV Sbjct 1 MHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDV 60 Query 62 ERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTV 121 ERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTV Sbjct 61 ERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTV 120 Query 122 PTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLAC 181 PTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLAC Sbjct 121 PTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLAC 180 Query 182 AGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELN 241 AGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELN Sbjct 181 AGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELN 240 Query 242 VAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLR 301 VAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLR Sbjct 241 VAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLR 300 Query 302 GQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDS 361 GQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDS Sbjct 301 GQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDS 360 Query 362 RVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLW 421 RVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLW Sbjct 361 RVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLW 420 Query 422 NGQSVSSL 429 NGQSVSSL Sbjct 421 NGQSVSSL 428 >gi|254552272|ref|ZP_05142719.1| hypothetical protein Mtube_17778 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289763363|ref|ZP_06522741.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|297635823|ref|ZP_06953603.1| hypothetical protein MtubK4_16947 [Mycobacterium tuberculosis KZN 4207] gi|297732820|ref|ZP_06961938.1| hypothetical protein MtubKR_17102 [Mycobacterium tuberculosis KZN R506] gi|313660153|ref|ZP_07817033.1| hypothetical protein MtubKV_17107 [Mycobacterium tuberculosis KZN V2475] gi|289710869|gb|EFD74885.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|344221012|gb|AEN01643.1| hypothetical protein MTCTRI2_3242 [Mycobacterium tuberculosis CTRI-2] Length=429 Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/429 (99%), Positives = 429/429 (100%), Gaps = 0/429 (0%) Query 1 VVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD 60 +VHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD Sbjct 1 MVHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD 60 Query 61 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT 120 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT Sbjct 61 VERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLT 120 Query 121 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA 180 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA Sbjct 121 VPTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA 180 Query 181 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL 240 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL Sbjct 181 CAGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQEL 240 Query 241 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL 300 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL Sbjct 241 NVAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWL 300 Query 301 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPD 360 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDL+HFRDRDGREIDCILQTPD Sbjct 301 RGQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLHHFRDRDGREIDCILQTPD 360 Query 361 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL 420 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL Sbjct 361 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL 420 Query 421 WNGQSVSSL 429 WNGQSVSSL Sbjct 421 WNGQSVSSL 429 >gi|8515819|gb|AAF76191.1|AF271296_1 putative ATP/GTP binding protein [Mycobacterium smegmatis] Length=428 Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/428 (90%), Positives = 394/428 (93%), Gaps = 0/428 (0%) Query 2 VHDEAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDV 61 +HDE GHELIERH+LEQLRE EYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDV Sbjct 1 MHDETGHELIERHVLEQLRETLEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDV 60 Query 62 ERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTV 121 ERASARADPEG IM APRPTFLDEVQCAGDPLILAIKTATDRD RPRQFFLSGSTRFLTV Sbjct 61 ERASARADPEGLIMYAPRPTFLDEVQCAGDPLILAIKTATDRDGRPRQFFLSGSTRFLTV 120 Query 122 PTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLAC 181 PTLSESLAGRV ILD+WPLSVAERSGV PEIIAQLFTEPQVVLGTEPAPVT HE+LQLAC Sbjct 121 PTLSESLAGRVTILDVWPLSVAERSGVGPEIIAQLFTEPQVVLGTEPAPVTGHEFLQLAC 180 Query 182 AGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELN 241 AGGFPEVVQRPAGRARSRWFS RTVT R+VRELKRIEQT RLPRFMRYLAAITAQELN Sbjct 181 AGGFPEVVQRPAGRARSRWFSGTSRTVTLREVRELKRIEQTHRLPRFMRYLAAITAQELN 240 Query 242 VAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLR 301 VAEAARVIGVDAGTIRSDLAL T YLV RLPAWSRNL+A KK S I VVDSGFAAWLR Sbjct 241 VAEAARVIGVDAGTIRSDLALLHTCYLVRRLPAWSRNLSAVRKKPSTIRVVDSGFAAWLR 300 Query 302 GQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDS 361 +SA SLARPTAEG GPIM + VI+ELMKLRA T LEVDLY FR RD REIDCILQTPDS Sbjct 301 PRSAVSLARPTAEGPGPIMASLVISELMKLRAGTALEVDLYTFRARDRREIDCILQTPDS 360 Query 362 RVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLW 421 RVVGVEVKASATVNVHDFRHLSFARDRLGD+FITGVLFYTGARALPFGDRLMALPINLLW Sbjct 361 RVVGVEVKASATVNVHDFRHLSFARDRLGDDFITGVLFYTGARALPFGDRLMALPINLLW 420 Query 422 NGQSVSSL 429 N QSVSSL Sbjct 421 NRQSVSSL 428 >gi|294992977|ref|ZP_06798668.1| hypothetical protein Mtub2_00340 [Mycobacterium tuberculosis 210] Length=247 Score = 502 bits (1293), Expect = 4e-140, Method: Compositional matrix adjust. Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%) Query 183 GGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNV 242 GGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNV Sbjct 1 GGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNV 60 Query 243 AEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRG 302 AEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRG Sbjct 61 AEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRG 120 Query 303 QSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSR 362 QSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSR Sbjct 121 QSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSR 180 Query 363 VVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 VVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN Sbjct 181 VVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 240 Query 423 GQSVSSL 429 GQSVSSL Sbjct 241 GQSVSSL 247 >gi|340625627|ref|YP_004744079.1| hypothetical protein MCAN_06031 [Mycobacterium canettii CIPT 140010059] gi|340003817|emb|CCC42943.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=411 Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 170/416 (41%), Positives = 240/416 (58%), Gaps = 9/416 (2%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 ++ER + + T VV++NG RQ GKTTL+ +L + SLD R +AR D Sbjct 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 Query 70 PEGYIMSAPRPTFLDEVQCAGDP-LILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 128 P ++ +DE Q +P L AIK DRDRRP +F L+GS R L+ P ++++L Sbjct 63 PRAFVSRPVDTLVIDEAQL--EPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 Query 129 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEP-QVVLGTEPAPVTRHEYLQLACAGGFPE 187 GRV I++LWP S ER+G+ + LFT P +++ G++ + R + + GGFP+ Sbjct 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSD---MRRADLVDRIATGGFPD 177 Query 188 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 247 +V R R R+ WF +YL T TQ +RE+ IE+ +PR +R AA T ELNV+ A Sbjct 178 IVARSPSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAN 236 Query 248 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 307 + + A T LAL E +L+HR+PAWS NL+ K+ +R K+ V DSG A L G + + Sbjct 237 DLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGAT 296 Query 308 LARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVE 367 L RP GP++ETFV NE+ K + L+HFRDR G E+D +L+ PD RV G+E Sbjct 297 LDRP-GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIE 355 Query 368 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 423 VKA++T D R L + +RL D F GVL A PFG L ALP++ LW G Sbjct 356 VKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWTG 411 >gi|15607737|ref|NP_215111.1| hypothetical protein Rv0597c [Mycobacterium tuberculosis H37Rv] gi|15840000|ref|NP_335037.1| hypothetical protein MT0627 [Mycobacterium tuberculosis CDC1551] gi|31791779|ref|NP_854272.1| hypothetical protein Mb0613c [Mycobacterium bovis AF2122/97] 72 more sequence titles Length=411 Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 170/416 (41%), Positives = 240/416 (58%), Gaps = 9/416 (2%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 ++ER + + T VV++NG RQ GKTTL+ +L + SLD R +AR D Sbjct 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 Query 70 PEGYIMSAPRPTFLDEVQCAGDP-LILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 128 P ++ +DE Q +P L AIK DRDRRP +F L+GS R L+ P ++++L Sbjct 63 PRAFVSRPVDTLVIDEAQL--EPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 Query 129 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEP-QVVLGTEPAPVTRHEYLQLACAGGFPE 187 GRV I++LWP S ER+G+ + LFT P +++ G++ + R + + GGFP+ Sbjct 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSD---MRRADLVDRIATGGFPD 177 Query 188 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 247 +V R R R+ WF +YL T TQ +RE+ IE+ +PR +R AA T ELNV+ A Sbjct 178 IVARSPSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAN 236 Query 248 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 307 + + A T LAL E +L+HR+PAWS NL+ K+ +R K+ V DSG A L G + + Sbjct 237 DLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGAT 296 Query 308 LARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVE 367 L RP GP++ETFV NE+ K + L+HFRDR G E+D +L+ PD RV G+E Sbjct 297 LDRP-GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIE 355 Query 368 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 423 VKA++T D R L + +RL D F GVL A PFG L ALP++ LW G Sbjct 356 VKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 >gi|289573197|ref|ZP_06453424.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289537628|gb|EFD42206.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] Length=411 Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 170/416 (41%), Positives = 240/416 (58%), Gaps = 9/416 (2%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 ++ER + + T VV++NG RQ GKTTL+ +L + SLD R +AR D Sbjct 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 Query 70 PEGYIMSAPRPTFLDEVQCAGDP-LILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 128 P ++ +DE Q +P L AIK DRDRRP +F L+GS R L+ P ++++L Sbjct 63 PRAFVSRPVDTLVIDEAQL--EPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 Query 129 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEP-QVVLGTEPAPVTRHEYLQLACAGGFPE 187 GRV I++LWP S ER+G+ + LFT P +++ G++ + R + + GGFP+ Sbjct 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSD---MRRADLVDRIATGGFPD 177 Query 188 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 247 +V R R R+ WF +YL T TQ +RE+ IE+ +PR +R AA T ELNV+ A Sbjct 178 IVARSPSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAN 236 Query 248 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 307 + + A T LAL E +L+HR+PAWS NL+ K+ +R K+ V DSG A L G + + Sbjct 237 DLSIPARTTVGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGAT 296 Query 308 LARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVE 367 L RP GP++ETFV NE+ K + L+HFRDR G E+D +L+ PD RV G+E Sbjct 297 LDRP-GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIE 355 Query 368 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 423 VKA++T D R L + +RL D F GVL A PFG L ALP++ LW G Sbjct 356 VKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 >gi|306796346|ref|ZP_07434648.1| hypothetical protein TMFG_03263 [Mycobacterium tuberculosis SUMu006] gi|308343197|gb|EFP32048.1| hypothetical protein TMFG_03263 [Mycobacterium tuberculosis SUMu006] Length=411 Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 169/416 (41%), Positives = 240/416 (58%), Gaps = 9/416 (2%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 ++ER + + T VV++NG RQ GKTTL+ +L + SLD R +AR D Sbjct 3 VVERAIAPSVLAALADTPVVVVNGARQVGKTTLVARLDYPGSSEVVSLDDVANRDAARDD 62 Query 70 PEGYIMSAPRPTFLDEVQCAGDP-LILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 128 P ++ ++E Q +P L AIK DRDRRP +F L+GS R L+ P ++++L Sbjct 63 PRAFVSRPVDTLVINEAQL--EPGLFRAIKAEVDRDRRPGRFLLTGSARLLSAPDMADAL 120 Query 129 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEP-QVVLGTEPAPVTRHEYLQLACAGGFPE 187 GRV I++LWP S ER+G+ + LFT P +++ G++ + R + + GGFP+ Sbjct 121 VGRVEIIELWPFSQGERAGIADGFVDALFTAPRELIHGSD---MRRADLVDRIATGGFPD 177 Query 188 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 247 +V R R R+ WF +YL T TQ +RE+ IE+ +PR +R AA T ELNV+ A Sbjct 178 IVARSPSRRRA-WFDNYLTTATQSVIREISPIERLAEMPRVLRLCAARTGAELNVSALAN 236 Query 248 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 307 + + A T LAL E +L+HR+PAWS NL+ K+ +R K+ V DSG A L G + + Sbjct 237 DLSIPARTTAGYLALLEAAFLIHRVPAWSTNLSRKVIRRPKLVVSDSGLACHLLGVTGAT 296 Query 308 LARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVE 367 L RP GP++ETFV NE+ K + L+HFRDR G E+D +L+ PD RV G+E Sbjct 297 LDRP-GRPLGPLLETFVANEIRKQLTWSTERPSLWHFRDRGGAEVDLVLEHPDGRVCGIE 355 Query 368 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 423 VKA++T D R L + +RL D F GVL A PFG L ALP++ LW G Sbjct 356 VKATSTPRAEDLRGLRYLAERLDDRFQFGVLLTAAPEATPFGPTLAALPVSTLWAG 411 >gi|340628276|ref|YP_004746728.1| hypothetical protein MCAN_33171 [Mycobacterium canettii CIPT 140010059] gi|340006466|emb|CCC45648.1| putative uncharacterized protein [Mycobacterium canettii CIPT 140010059] Length=422 Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 168/416 (41%), Positives = 250/416 (61%), Gaps = 9/416 (2%) Query 11 IERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARADP 70 I R++L ++ E TR+V++ G RQ GK+TL ++ LGG L +LD D+ R +A DP Sbjct 9 IARNLLPRVAEALIDTRIVVVQGARQVGKSTLAAEITGRLGGRLVTLDDDLTRTTAATDP 68 Query 71 EGYIMSAPRPTF-LDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 ++ P +DEVQ + L+LA+K D + RP ++ L+GS L +P +SLA Sbjct 69 YSFVRQFPDGLLTIDEVQRVPE-LVLALKATVDANHRPGRYLLTGSANLLQLPATEDSLA 127 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVV 189 GR L+L+ S E GV I +LF + LG E + + RH+YL AC+GG+PE V Sbjct 128 GRAESLELFGFSQGEVEGVTETFIDRLFAG-DLFLGHE-SDLARHDYLARACSGGYPEAV 185 Query 190 QRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVI 249 R + R R+ W +Y+ V +RD ++ +++ LPR +R LAA +A ELN++ A Sbjct 186 SRKSTRRRNAWLDNYVDRVVKRDAADVSNLQRIADLPRLIRLLAARSASELNLSSLATDA 245 Query 250 GVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQS---AD 306 + T+ L L ET+YL+ R+PAWS NL+ ++ R KI ++DSG AA L S A Sbjct 246 EIPVRTLPPYLDLLETLYLIDRIPAWSTNLSKRVVDRPKILLLDSGLAARLVNVSPTGAG 305 Query 307 SLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGV 366 A P A GA I+ETFVI EL + ++ L+H+RDRDG E+D IL+T D + + Sbjct 306 PHANPNAAGA--IIETFVIAELRRQLGWSQQAPRLFHYRDRDGAEVDLILETADGLIAAI 363 Query 367 EVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 E+K++AT+ D R +S RD++G F GV+ +TG +A PFGDRL A+PI++LW+ Sbjct 364 EIKSAATLRGRDTRSISRLRDKVGARFAGGVILHTGPQAQPFGDRLAAVPIDILWS 419 >gi|256389915|ref|YP_003111479.1| hypothetical protein Caci_0703 [Catenulispora acidiphila DSM 44928] gi|256356141|gb|ACU69638.1| conserved hypothetical protein [Catenulispora acidiphila DSM 44928] Length=436 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 161/420 (39%), Positives = 242/420 (58%), Gaps = 5/420 (1%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 LI RH+ L E+ VV++ G R GK+TLL G + LD R + AD Sbjct 6 LITRHLQPVLAELLADEPVVVLTGARTVGKSTLLAACAEVEGVPVLDLDDLPTRRAVAAD 65 Query 70 PEGYIMSA-PRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 128 E ++ + P P +DE Q L+ AIK ++D R +F L+GSTR+ ++PT +SL Sbjct 66 LELFVGADRPTPVCIDEFQHVPQ-LLDAIKAELNKDLRAGRFVLTGSTRYGSLPTAGQSL 124 Query 129 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEV 188 GR ++ +WPLS E +GV+ + L ++P ++ ++PA TR +Y ++ AGGFP Sbjct 125 TGRAHVVTMWPLSQGEINGVKETALDALISDPASLVVSDPATATRADYERVVLAGGFPLA 184 Query 189 VQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARV 248 + R +GR+R RWF D++ V +RDV E++++ Q LP+ +R LA T Q +NVA A Sbjct 185 LARDSGRSRDRWFRDFVTLVVERDVLEIRKVRQRQVLPQVLRRLADQTGQVVNVANIADA 244 Query 249 IGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSL 308 +G+DA T++ L L E V+L+HR+ ++R+ + + +K HVVD+G A L G ++ L Sbjct 245 VGLDATTVKDYLGLLEAVFLIHRVEPFTRSAANRAIRSAKAHVVDTGLGAHLIGLTSQKL 304 Query 309 A--RPTA-EGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVG 365 A P A G ++ETF +NELMK EV+ HFR RD +E+D +++T V Sbjct 305 AGRMPAALTQFGHLVETFAVNELMKQAGWANQEVEFSHFRTRDHQEVDLVIETAAGSVAA 364 Query 366 VEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNGQS 425 +EVKAS TV HDF L RD+LGD F+ G + G R+ + +RL LP+ LW S Sbjct 365 IEVKASGTVADHDFAGLRLLRDKLGDAFVGGAVVNLGQRSYTYEERLHVLPLERLWTPAS 424 >gi|284045327|ref|YP_003395667.1| ATPase AAA [Conexibacter woesei DSM 14684] gi|283949548|gb|ADB52292.1| AAA family ATPase [Conexibacter woesei DSM 14684] Length=416 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 166/421 (40%), Positives = 238/421 (57%), Gaps = 8/421 (1%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHA-ELGGWLRSLDVDVERASARA 68 ++ RHM ++ +R V G RQ GK+TL+ L A + + +LDV R +A Sbjct 1 MLSRHMRSRVLAALAESRAVAALGARQVGKSTLVADLAASDHPAEVLTLDVRETREAAEQ 60 Query 69 DPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 128 DP G++ + P +DEVQ D L+LAIK D ++ QF L+GS L++P + ++L Sbjct 61 DPTGFVAALPDRVAIDEVQRVPD-LLLAIKQRLDHNQERGQFLLTGSANILSIPKVRDAL 119 Query 129 AGRVAILDLWPLSVAERSGVRPEIIAQLFT-EPQVVLGTEPAPVTRHEYLQLACAGGFPE 187 GRV L LWPLS E +G R I +L EP + G + R Y AGG+PE Sbjct 120 PGRVDYLRLWPLSQGELTGRRETFIDRLLAGEPPRMTGQR---IGRASYAAAIVAGGYPE 176 Query 188 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 247 +R + R RS +F+ Y ++ RD+ ++ + D + R +R +A+ TA + AR Sbjct 177 AHER-SRRGRSSFFASYTDSLLGRDLADIATVRNVDNVKRLLRLIASRTAGLASFHGMAR 235 Query 248 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 307 +GVD T RS + E ++LV LPAW NL ++ K K+H+VDSG AWL G Sbjct 236 DLGVDTNTARSHTGVLEDLFLVRSLPAWHSNLGSRQIKSPKLHIVDSGLLAWLAGVDEQR 295 Query 308 LARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVE 367 LA AG +E+FV EL++ E E L+H+RD+ GRE+D +++TP VVGVE Sbjct 296 LA-DDGPLAGACIESFVAMELLRQSEWAEAETTLHHYRDQQGREVDVVIETPAGDVVGVE 354 Query 368 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNGQSVS 427 VKA A+ DFR L+ RDRLG F GV+ Y G R+LPFG+RL A P++ LW+GQ S Sbjct 355 VKAGASARPADFRGLAHMRDRLGSRFRAGVVLYAGERSLPFGERLTAQPLSALWDGQPDS 414 Query 428 S 428 + Sbjct 415 A 415 >gi|56459638|ref|YP_154919.1| ATPase [Idiomarina loihiensis L2TR] gi|56178648|gb|AAV81370.1| Predicted ATPase, AAA+ superfamily [Idiomarina loihiensis L2TR] Length=414 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 153/412 (38%), Positives = 238/412 (58%), Gaps = 4/412 (0%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 L+ER+ E L + E T V+LI+G RQ GKTTL + + LG + D + + +A+AD Sbjct 5 LLERYTKESLLDALEDTPVILIHGSRQCGKTTLAKSVGEVLGYAYITFDDENQLGAAKAD 64 Query 70 PEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 P G++ S P T LDE+Q + L L+IK + D +R P +F L+GS L +P LS+SLA Sbjct 65 PVGFVKSLPEKTILDEIQRVPE-LFLSIKESVDANRVPGRFILTGSANVLLLPQLSDSLA 123 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYL-QLACAGGFPEV 188 GR+ I+ L PL+ E +G +P +A LF+E T + L + GG+P Sbjct 124 GRMEIIHLRPLAQCEITGQKPNFLASLFSESLFSAVTNKKTASLGSSLADILVQGGYPAA 183 Query 189 VQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARV 248 +QR A + R+ W+ Y+ T+ QRD+++L I + LP+ + A+ T + N +E A Sbjct 184 IQRKAAKRRNAWYRGYITTILQRDIKDLANIRNVNLLPKLLSLAASQTGRLFNSSELASP 243 Query 249 IGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSL 308 V T+R LAL E ++L+ L W N +++ K K+H+ D+G A+ L G +AD L Sbjct 244 FSVSRPTVREYLALLEQIFLIEELSPWHSNRISRLIKTPKLHLSDTGLASSLLGVNADEL 303 Query 309 ARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEV 368 + E G ++ETF+ EL K + + ++ YHFR++D E+D I++ + G+EV Sbjct 304 WK-DKELLGQLLETFIYQELRKHASWHDEDLKFYHFRNKDKVEVDIIIEKGRLK-AGIEV 361 Query 369 KASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL 420 KA+ATV DF+ L +D +F G++FY G + LPFGD+L A+PI+ L Sbjct 362 KAAATVKQSDFKGLIRLKDACKGDFAGGIVFYDGEQVLPFGDKLYAVPISHL 413 >gi|299133054|ref|ZP_07026249.1| conserved hypothetical protein [Afipia sp. 1NLS2] gi|298593191|gb|EFI53391.1| conserved hypothetical protein [Afipia sp. 1NLS2] Length=418 Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 159/414 (39%), Positives = 236/414 (58%), Gaps = 7/414 (1%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 + ER + + E T VVLI GPR+AGKTTL++++ E G +LD +A++D Sbjct 1 MFERFVERRAEEALSDTPVVLIVGPRRAGKTTLVRKM-GEAGRTYITLDDQTVLEAAQSD 59 Query 70 PEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 P G+I R +DE+Q A D L+LAIK D D RP +F L+GS LT+P +++SLA Sbjct 60 PAGFIRGLDR-AIIDEIQRAPD-LLLAIKKTIDEDYRPGRFLLTGSANVLTLPRVADSLA 117 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVV 189 GR+ + + PL+ AE G P + LF L ++ + + +QL GGFPE + Sbjct 118 GRMETIQMLPLARAEIEGRTPTFLEHLFAGK---LRSQRDAILGDDLVQLVLLGGFPEAI 174 Query 190 QRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVI 249 R + R R W YL ++ RD+R++ +E+ LP+F+R LA + Q +N ++ I Sbjct 175 SRDSERRRQDWSRSYLTSILTRDLRDIADVEKLTELPKFVRLLAEHSGQLVNYSQFGAGI 234 Query 250 GVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLA 309 V T + + L E V+L+ + W N +I K K+H +DSG A +RG S D + Sbjct 235 NVSHKTGQRYVGLLEQVFLIATVQPWFTNALKRIVKTPKLHFLDSGLLATVRGLSFDRV- 293 Query 310 RPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVK 369 + G ++E+FV E++KL A++L + +HFRDRDGRE+D +L+ D + G+EVK Sbjct 294 KADRSTFGALLESFVFAEILKLMTASDLRLTPHHFRDRDGREVDIVLERDDGMIAGIEVK 353 Query 370 ASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 423 ASATV DF L + GD F GV+ Y +PFGDRL A P++ LWNG Sbjct 354 ASATVKAGDFGGLRALAEACGDRFAFGVVLYDSTDVVPFGDRLAAAPLSSLWNG 407 >gi|209544898|ref|YP_002277127.1| hypothetical protein Gdia_2779 [Gluconacetobacter diazotrophicus PAl 5] gi|209532575|gb|ACI52512.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length=406 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 156/413 (38%), Positives = 239/413 (58%), Gaps = 7/413 (1%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 + ER + + E T VVLI GPR+AGKTTL++++ E G +LD +A++D Sbjct 1 MFERFVERRAEEALSDTPVVLIVGPRRAGKTTLVRKM-GEAGRTYITLDDQTVLEAAQSD 59 Query 70 PEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 P G+I R +DE+Q D L+LAIK D D RP +F L+GS LT+P +++SLA Sbjct 60 PAGFIRGLDR-AIIDEIQRVPD-LLLAIKKTVDEDYRPGRFLLTGSANVLTLPRIADSLA 117 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVV 189 GR+ + + PL+ AE G RP + +LF + L ++ + + ++LA GGFPE + Sbjct 118 GRMETIQMLPLAKAEIEGRRPTFLERLF---EGKLQSQRDAIVGDDLVRLALLGGFPEAI 174 Query 190 QRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVI 249 R + R R W YL ++ RD+R++ +E+ LP+F+R LA + Q +N ++ I Sbjct 175 SRESERRRQDWLRSYLTSILTRDLRDIADVEKLTELPKFVRLLAEHSGQLVNYSQFGSGI 234 Query 250 GVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLA 309 V T + +AL E V+L+ + W N +I K K+H +DSG A +RG + D + Sbjct 235 NVTHKTGQRYVALLEQVFLIATVQPWFTNALKRIVKTPKLHFLDSGLLASVRGLTFDRV- 293 Query 310 RPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVK 369 + G ++E+FV +E++KL A++L + +HFRDRD RE+D +L+ D + G+EVK Sbjct 294 KADRGAFGALLESFVFSEVLKLMTASDLRLTPHHFRDRDMREVDLVLERDDGMIAGIEVK 353 Query 370 ASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 ASATV DF L D GD F GV+ Y + +PFGD+L A P++ LW Sbjct 354 ASATVKAGDFAGLRALADACGDRFAFGVVLYDSSDIVPFGDKLAAAPLSCLWG 406 >gi|330467336|ref|YP_004405079.1| hypothetical protein VAB18032_16875 [Verrucosispora maris AB-18-032] gi|328810307|gb|AEB44479.1| hypothetical protein VAB18032_16875 [Verrucosispora maris AB-18-032] Length=420 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 165/416 (40%), Positives = 236/416 (57%), Gaps = 11/416 (2%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 LI RH Q+ TRVVLI+G RQAGK+TL++ + + R LD +RA+A AD Sbjct 6 LIPRHAAAQVNAALADTRVVLISGARQAGKSTLVRLVAGDRLAERRDLDRAQDRAAAIAD 65 Query 70 PEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 P G++ S+ +DE+Q A + L+LAIK A D D RP ++ L+GS+R + ++L Sbjct 66 PVGFVDSS-ELLVIDEIQRAPE-LLLAIKAAVDEDPRPGRYLLTGSSRLFGMVAAPDALP 123 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTE---PAPVTRHEYLQLACAGGFP 186 GR+ ++LWP S E G I +F LG + + VTR +Y GG P Sbjct 124 GRMETVELWPFSQGELDGALDGFIDAVFA-----LGPDLRHESDVTRADYAARIVRGGLP 178 Query 187 EVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAA 246 E R R R R+ Y++ + RDVR+L I+ L R +R LAA +A + Sbjct 179 EATARTDPRRRQRFLDAYVQALIDRDVRQLSDIQHKGELRRLVRLLAARSATIIAANSLE 238 Query 247 RVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSAD 306 +G+ TI L E ++L+ R+P WSRNL + SK+ VDSG AA G A Sbjct 239 SALGLSRPTIVRYLQALEEIFLIKRIPGWSRNLGTRATAASKLIFVDSGIAANEIGTDAR 298 Query 307 SLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGV 366 +L RP A GP++E+FV++EL + +E VDL H+RD+ E+D +L+ +VVG+ Sbjct 299 ALLRPGAP-FGPLLESFVLSELSRQLTWSEQFVDLSHYRDQSRYEVDAVLENRAGQVVGI 357 Query 367 EVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 EVKA++TV DFR L DRLGD+FI G++ YTG LPFGDR+ A+P++ LW Sbjct 358 EVKAASTVGPDDFRGLRRLADRLGDDFIVGIVLYTGTATLPFGDRIRAMPVSALWQ 413 >gi|336176198|ref|YP_004581573.1| hypothetical protein FsymDg_0066 [Frankia symbiont of Datisca glomerata] gi|334857178|gb|AEH07652.1| hypothetical protein FsymDg_0066 [Frankia symbiont of Datisca glomerata] Length=423 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 173/401 (44%), Positives = 230/401 (58%), Gaps = 10/401 (2%) Query 28 VVLINGPRQAGKTTLLQQLHAELGGWLRSLD-VDVERASARADPEGYIMSAPRPTFLDEV 86 VVL+ GPR GK+TLL+ L E+G L LD V V A AR DP G ++ PRP +DE Sbjct 26 VVLLQGPRSVGKSTLLRNLAGEVGAELVDLDDVAVRDAVAR-DP-GTFVAGPRPVCIDEY 83 Query 87 QCAGDPLIL-AIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLAGRVAILDLWPLSVAER 145 Q PL L AIK +RD RP +F L+GS R +P +++L GR+ L ++PLS E Sbjct 84 QHV--PLALDAIKAELNRDGRPGRFVLTGSARHEALPQAAQALTGRLHRLPVYPLSQGEL 141 Query 146 SGVRPEIIAQLFTEPQVVLGT-EPAPVTRHEYLQLACAGGFPEVVQRPAGRARSRWFSDY 204 GV ++ LF +P + P+ +R EY+ AGGFP + R + +RSRW DY Sbjct 142 RGVHEHLLEDLFADPAAAVAAARPSVTSREEYIDSVTAGGFPSALARASLASRSRWLDDY 201 Query 205 LRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVIGVDAGTIRSDLALFE 264 +R +RDV EL RI Q LP LA TAQ LN+A AA + +D T S L L E Sbjct 202 IRLSLERDVGELARIRQAASLPVLFERLAGQTAQVLNIARAASSVRLDERTAYSYLRLLE 261 Query 265 TVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAA-WLRGQSADSLAR-PTA-EGAGPIME 321 V+L++RLPAW LTA+ KIH++DSG AA LR +AR PTA G ++E Sbjct 262 AVFLLYRLPAWGNTLTARSTASPKIHILDSGVAARLLRLTPRKLVARNPTALTEFGHLLE 321 Query 322 TFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVKASATVNVHDFRH 381 TFV+ EL+K + T+ H+R RDG E+D +++ D +V EVKA+ V DF Sbjct 322 TFVVTELLKQASWTDWVGGAGHWRTRDGDEVDLVVERDDGALVAFEVKAAGRVPGEDFAP 381 Query 382 LSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 L RD GD F GV+FY GAR+ F DRL LP++ +W Sbjct 382 LRKLRDTTGDAFTAGVVFYLGARSYTFEDRLHILPVDTIWT 422 >gi|336116428|ref|YP_004571194.1| hypothetical protein MLP_07770 [Microlunatus phosphovorus NM-1] gi|334684206|dbj|BAK33791.1| hypothetical protein MLP_07770 [Microlunatus phosphovorus NM-1] Length=419 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 162/416 (39%), Positives = 236/416 (57%), Gaps = 13/416 (3%) Query 9 ELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARA 68 +++ RH + RE TRVVLING RQ+GK+TL QL A+ W R+LD RA+A + Sbjct 11 KVLPRHAFDTAREALADTRVVLINGARQSGKSTLAAQLGAD-AVW-RTLDDAPTRAAALS 68 Query 69 DPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 128 DP G++ + +DEVQ A + L+LAIK D++ P QF L+GS R L + ++++L Sbjct 69 DPAGFVAPTGQMQIIDEVQRAPE-LLLAIKAVVDQNADPGQFLLTGSARVLAMRGVTDAL 127 Query 129 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTE---PAPVTRHEYLQLACAGGF 185 GR ++LWPLS E E A F + LG + + +R Y++ GGF Sbjct 128 PGRTETIELWPLSQGE-----IEHEADGFVDAIFTLGADFRHESDESRTAYIERLVRGGF 182 Query 186 PEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEA 245 P + RPA R R+R+ Y+ + RDV +L I++ + + LA + Q L Sbjct 183 PGAIGRPAPR-RARFLDSYVGDLVNRDVVQLSEIQRGPEMHTLIEVLAGRSGQTLAAGSL 241 Query 246 ARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSA 305 A IG+ T+ L L E V+L+ R+PAW+RN+ + K+ VDSG AA L Q A Sbjct 242 ATKIGLPRDTVARYLRLLEEVFLIKRIPAWARNINTRATAAPKLAFVDSGIAANLLDQDA 301 Query 306 DSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVG 365 SL RP A G +ME FV E+ + + L H+R RDG E+D +L+ RV+ Sbjct 302 ASLRRPDAP-LGALMEGFVAMEIARQLTWSHTRARLSHYRTRDGVEVDLVLEDRRRRVIA 360 Query 366 VEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLW 421 +EVKA++TV DFR + +RLGD+ + G++ YTGA+ LPFG+RL A+PI+ LW Sbjct 361 IEVKAASTVRTEDFRGIRHLAERLGDDLVVGIVLYTGAQTLPFGNRLRAIPISALW 416 >gi|209547117|ref|YP_002279035.1| hypothetical protein Rleg2_5079 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538361|gb|ACI58295.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length=417 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 161/419 (39%), Positives = 238/419 (57%), Gaps = 14/419 (3%) Query 8 HELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASAR 67 +LIER + TRVVLI GPRQAGKTTL +Q+ ++ DV A AR Sbjct 8 KKLIERKARPIVETALADTRVVLIAGPRQAGKTTLARQVSGSDRPFITLDDVGTLNA-AR 66 Query 68 ADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSES 127 DP G+I R +DEVQ A + LILAIK + DRD P +F L+GS TVP +++S Sbjct 67 TDPIGFIRGIKR-AVIDEVQRAPE-LILAIKESVDRDDEPGRFLLTGSANLATVPVIADS 124 Query 128 LAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAP----VTRHEYLQLACAG 183 LAGR+A++ L P + +E ++ +LF G EP+ V + L G Sbjct 125 LAGRMAVVPLLPFAQSEIQSTPGRLLDRLFA------GEEPSAGEDTVIGDDLLLTVLRG 178 Query 184 GFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVA 243 G+PE ++R R+ W DY++ + RDVR++ I+Q DRLPR + LA Q +N + Sbjct 179 GYPEALRRSTPGRRTAWLEDYVKLILDRDVRDIANIDQLDRLPRLLDVLAEHAGQLVNHS 238 Query 244 EAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQ 303 +G+ + T + +A+ E ++L+ L WS N ++ K K+H +DSG A LR Sbjct 239 SFGATLGLSSITAQKYVAILERLFLIRTLVPWSNNRLNRLVKTPKLHFLDSGLLATLRED 298 Query 304 SADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRV 363 AD+L R G ++E+FV++EL+KL + ++ + H+R RD E+D I++ RV Sbjct 299 EADAL-RDNKTRFGALLESFVVSELLKLASWSDRRLSFSHYRTRDQDEVDVIIEDRRGRV 357 Query 364 VGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 VG+EVKASATV DFR L +D +GD F+ G++ + R PFG++L A P++LLW Sbjct 358 VGIEVKASATVKSDDFRGLRQLQDAVGDRFVRGLVLHDHDRVTPFGEKLQAAPLSLLWT 416 >gi|312195031|ref|YP_004015092.1| hypothetical protein FraEuI1c_1149 [Frankia sp. EuI1c] gi|311226367|gb|ADP79222.1| hypothetical protein FraEuI1c_1149 [Frankia sp. EuI1c] Length=424 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 165/419 (40%), Positives = 236/419 (57%), Gaps = 8/419 (1%) Query 9 ELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRS--LDVDVERASA 66 EL RH + TRVV++NG RQ GK+TL +L + G R+ LD D RA+A Sbjct 10 ELFPRHAEALVSAALADTRVVVVNGARQVGKSTL-ARLAVDAHGEARTYYLDDDAVRAAA 68 Query 67 RADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSE 126 ADP G++ +A +DE+Q A D L+LAIK+ DRD RP ++ L+GS R + + + Sbjct 69 LADPAGFV-NADGLLMIDEIQRAPD-LLLAIKSKVDRDPRPGRYLLTGSARLWGMKGIPD 126 Query 127 SLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFP 186 L GR ++LWPL+ E G + +F + +L P + R++Y++ A GG+P Sbjct 127 ILPGRSETVELWPLAQGEIDGGPDAFVDAVFARDEPLLA--PGALDRNDYVERALRGGYP 184 Query 187 EVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAA 246 E V+R R R+R+F Y+ + RD+R++ IE+T L + ++ LAA L + Sbjct 185 EAVRREDLRRRARFFESYISDLIGRDIRQISEIERTAELRQLVQALAATAGGLLVPNRLS 244 Query 247 RVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSAD 306 + V A T+R LA E Y+V R+PAWS NLT + KI VDSG A L G S Sbjct 245 NDLAVPATTVRRHLAALELSYVVQRIPAWSNNLTTRAVATPKIIFVDSGLAGHLTGMSPR 304 Query 307 SLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGV 366 + PTA G ++E FV+ EL + + V L+H+RDRDG E+D +L+ +VGV Sbjct 305 RASHPTAN-VGALIENFVLGELARQLTWAQEPVSLFHYRDRDGNEVDAVLERASGEIVGV 363 Query 367 EVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNGQS 425 EVKA+ TV DFR L D++GD F G + Y G LPFG RL A+PI+ LW Q+ Sbjct 364 EVKAAETVRTEDFRGLRRLADQIGDRFHAGYVLYAGPEVLPFGPRLRAVPISALWTAQA 422 >gi|336116198|ref|YP_004570964.1| hypothetical protein MLP_05470 [Microlunatus phosphovorus NM-1] gi|334683976|dbj|BAK33561.1| hypothetical protein MLP_05470 [Microlunatus phosphovorus NM-1] Length=415 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 152/415 (37%), Positives = 238/415 (58%), Gaps = 7/415 (1%) Query 11 IERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARADP 70 + RH+ ++ E TR+V++ G RQ GKTTL++++ GG L S D + +A DP Sbjct 4 VARHVKPRVLEALGDTRIVVVQGARQVGKTTLVREIVGAKGGRLESFDDRLTARAASEDP 63 Query 71 EGYIMSAP-RPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 G++ +AP R +DEVQ + LILA+K DRD RP +F ++GS L +P + +SLA Sbjct 64 IGFLSAAPDRLLAIDEVQRVPE-LILALKYVVDRDTRPGRFLVTGSANLLKLPAIEDSLA 122 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVV 189 GR ++L S E +G + +L T + + + R +YL+ A AGG+PE + Sbjct 123 GRTESIELHGFSQGEIAGHAERFVDRLLTGER--FADHRSDLHRRDYLERAVAGGYPEAL 180 Query 190 QRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVI 249 R GR R W +Y+ + +R+ ++ +++ LP +R LAA + EL VA+ AR Sbjct 181 TRTPGRRRDLWLDNYVNGIVRREADDVSNLQRIAELPLILRVLAARNSGELIVADVARET 240 Query 250 GVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLA 309 + A T+ L L +T+YL +PAW+ NL ++ R K+ ++DSG AA L SA A Sbjct 241 EIPARTLTPYLELLQTLYLTQHVPAWATNLAKRVVSRPKVSLLDSGLAARLINVSAQG-A 299 Query 310 RPTAEG--AGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVE 367 P AG ++E FV E+ + +E + HFR++ E+D +L+TPD RV G+E Sbjct 300 SPDGNPHVAGGLLEGFVAGEIRRQLTWSEETARIGHFREQSAGEVDLVLETPDGRVAGIE 359 Query 368 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 VK++A D + L++ RDRLG F+ GV+ +TG A FGDR+ A+P+++LW Sbjct 360 VKSTAAPKAKDAKGLAYLRDRLGKRFVAGVILHTGTTAGAFGDRIAAVPMDVLWT 414 >gi|238061727|ref|ZP_04606436.1| hypothetical protein MCAG_02693 [Micromonospora sp. ATCC 39149] gi|237883538|gb|EEP72366.1| hypothetical protein MCAG_02693 [Micromonospora sp. ATCC 39149] Length=437 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 165/414 (40%), Positives = 232/414 (57%), Gaps = 7/414 (1%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 LI R Q+ TRVVLI+G RQAGK+TL++ + + R LD +RA+A AD Sbjct 23 LIPRRAAAQVDAALADTRVVLISGARQAGKSTLVRIVAGDRLAERRDLDRAQDRAAALAD 82 Query 70 PEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 P G++ S P +DE+Q A + L+LAIK A D D RP ++ L+GS+R + ++L Sbjct 83 PVGFVDS-PELLAIDEIQGAPE-LLLAIKAAVDEDPRPGRYLLTGSSRLFGMVAAPDALP 140 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLFT-EPQVVLGTEPAPVTRHEYLQLACAGGFPEV 188 GR+ ++LWPLS E G + LF P + +E VTR +Y GG PE Sbjct 141 GRMETVELWPLSQGELDGAPDGFVDALFALGPDLRHESE---VTRADYAARIVRGGLPEA 197 Query 189 VQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARV 248 R R R R+ Y++ + RDVR+L I+ L + +R LAA +A + Sbjct 198 TTRTDPRRRQRFLDAYVQALIDRDVRQLSDIQHKGELRKLVRLLAARSATIIAANSLESA 257 Query 249 IGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSL 308 +G+ TI L E ++L+ R+P WSRNL + K+ VDSG AA A +L Sbjct 258 LGLSRPTIARYLQALEEIFLIKRIPGWSRNLGTRTTAAPKLIFVDSGIAANEIATDARAL 317 Query 309 ARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEV 368 RP A GP++E+FV++EL + +E VDL H+RD+ E+D +L+ VVG+EV Sbjct 318 LRPGAP-FGPLLESFVLSELSRQLTWSEQFVDLSHYRDQSRYEVDAVLENRSGHVVGIEV 376 Query 369 KASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 KA+ TV DFR L DRLGD+FI GV+ YTG LPFGD+L ALP++ LW Sbjct 377 KAATTVGPDDFRGLRRLADRLGDDFIAGVVLYTGTSTLPFGDKLRALPVSALWQ 430 >gi|111222751|ref|YP_713545.1| hypothetical protein FRAAL3336 [Frankia alni ACN14a] gi|111150283|emb|CAJ61980.1| conserved hypothetical protein [Frankia alni ACN14a] Length=425 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 162/401 (41%), Positives = 225/401 (57%), Gaps = 10/401 (2%) Query 28 VVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARADPEGYIMSAPRPTFLDEVQ 87 VVL+ GPR GK+TLL+ L A+LG L LD R +A DP ++ A P +DE Q Sbjct 26 VVLLQGPRSVGKSTLLRGLAADLGAELIDLDDLASRDAAARDPALFVTGAG-PVCIDEYQ 84 Query 88 CAGDPLIL-AIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLAGRVAILDLWPLSVAERS 146 P+IL AIK +RD RP +F L+GS R +P +++L GR+ L ++PLS E Sbjct 85 HV--PIILDAIKAELNRDGRPGRFVLTGSARHEALPRAAQALTGRLHRLPVYPLSQGEVR 142 Query 147 GVRPEIIAQLFTEPQVVLGT---EPAPVTRHEYLQLACAGGFPEVVQRPAGRARSRWFSD 203 GV ++ LFT+P + P+ TR EY+ AGGFP V+ R + +R+RW D Sbjct 143 GVHEHLLDDLFTDPATAVTAAAARPSATTREEYIDSVTAGGFPSVLARTSLASRNRWLDD 202 Query 204 YLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVIGVDAGTIRSDLALF 263 Y+ +RDVR+L RI Q LP + LA TAQ LN+ AA +D T S + L Sbjct 203 YVSLSLERDVRDLSRIRQAAALPALLERLAGQTAQILNITRAAASARLDEKTAHSYVRLL 262 Query 264 ETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLA--RPTA-EGAGPIM 320 E V+L++RLPAW LT + K+HV+DSG AA L + LA PTA G ++ Sbjct 263 EAVFLLYRLPAWGTTLTTRSTASPKVHVLDSGVAARLLRLTPQKLAARNPTALTEFGHLL 322 Query 321 ETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVKASATVNVHDFR 380 ETFV+ EL+K + + + H+R RDG E+D +++ D +V EVKA+ V D Sbjct 323 ETFVVTELLKQASWADWVSGVGHWRTRDGDEVDLVVERDDGSIVAFEVKAAGRVPGDDLA 382 Query 381 HLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLW 421 L RD GD F+ GV Y GAR+ F DRL +P++ +W Sbjct 383 PLRKLRDAAGDAFVAGVALYLGARSYTFEDRLHVMPVDTIW 423 >gi|110632900|ref|YP_673108.1| hypothetical protein Meso_0540 [Mesorhizobium sp. BNC1] gi|110283884|gb|ABG61943.1| conserved hypothetical protein [Chelativorans sp. BNC1] Length=406 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 155/412 (38%), Positives = 236/412 (58%), Gaps = 7/412 (1%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 + +R + + E T VVLI GPR+AGKTTL++++ E G +LD +A++D Sbjct 1 MFQRFVERRAEEALADTPVVLIVGPRRAGKTTLVRKM-GETGWTYSTLDDQTVLEAAQSD 59 Query 70 PEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 P G+I R +DE+Q A + L+LAIK D D RP +F L+GS LT+P +++SLA Sbjct 60 PAGFIRGLDR-AIIDEIQRAPN-LLLAIKKTVDEDYRPGRFLLTGSANVLTLPRVADSLA 117 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVV 189 GR+ + + PL+ AE P + +LF + L ++ A + E +QLA GGFPE + Sbjct 118 GRMETIRMLPLARAEIESRAPTFLERLF---EGNLESQSAAIVGDELVQLALRGGFPEAI 174 Query 190 QRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVI 249 R + R R W YL ++ RD+R++ +E+ LP+F+R LA + Q +N ++ A I Sbjct 175 SRDSERRRQDWARAYLTSILTRDLRDIAEVEKLTELPKFVRLLAEHSGQLVNYSQLASGI 234 Query 250 GVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLA 309 V+ T + + L E V+L+ L W N +I K K+H +DSG A RG + D + Sbjct 235 NVNHRTGQRYVGLLEQVFLIATLQPWFTNALKRIVKTPKLHFLDSGLLAAARGLTFDRI- 293 Query 310 RPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVK 369 + G ++E+FV +E++KL A++L + +HFRDRD RE+D +L+ D + +EVK Sbjct 294 KADRGAFGALLESFVFSEVLKLMTASDLRLTPHHFRDRDMREVDIVLERDDGMIAAIEVK 353 Query 370 ASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLW 421 ASATV DF L + GD F GV+ Y +PFGD L A P++ LW Sbjct 354 ASATVKASDFSGLRALAEACGDRFAFGVVLYDSTDVVPFGDSLAAAPLSCLW 405 >gi|119357028|ref|YP_911672.1| AAA family ATPase [Chlorobium phaeobacteroides DSM 266] gi|119354377|gb|ABL65248.1| ATPase, AAA+ superfamily [Chlorobium phaeobacteroides DSM 266] Length=415 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 162/399 (41%), Positives = 225/399 (57%), Gaps = 11/399 (2%) Query 28 VVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARADPEGYIMSAPRPTFLDEVQ 87 VVL++GPRQ GKTTL + + E G + D DV+RA+A+ DP GY+ P LDEVQ Sbjct 24 VVLLHGPRQCGKTTLARLVGDEAGFAYFTFDDDVQRAAAQTDPIGYVADLPERAVLDEVQ 83 Query 88 CAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLAGRVAILDLWPLSVAERSG 147 + L ++K A D R P +F L+GS L VP L++SLAGR+ IL L PLS AE G Sbjct 84 RVPE-LFTSLKAAVDTRRLPGRFILTGSANVLLVPKLADSLAGRMEILRLHPLSQAELGG 142 Query 148 VRPEIIAQLFTEPQVVLGTEPAPVTRHEYL-QLACAGGFPEVVQRPAGRARSRWFSDYLR 206 +++LF P+ + + L Q AGGFP + R R + W+ DY Sbjct 143 KPCGFVSRLFASD---FKAGPSGLRLGKTLAQRVVAGGFPAALARANERRSATWYRDYAE 199 Query 207 TVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVIGVDAGTIRSDLALFETV 266 T+ QRD+R+L RI D LPR + A TA +NV+E A + TIR L + + Sbjct 200 TLIQRDIRDLARISAMDALPRLLTLAAGQTACLVNVSELAAPFQISRQTIREYLTILSRI 259 Query 267 YLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSL--ARPTAEGAGPIMETFV 324 +LV LP+W RN ++ K K+HV D+G A L G + +SL RP G ++ETFV Sbjct 260 FLVDELPSWHRNRMKRLVKTPKLHVGDTGLACALLGLNGNSLWGDRPL---FGRLLETFV 316 Query 325 INELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVKASATVNVHDFRHLSF 384 EL +L + E V HFRD+D E+D +L++ + + GVEVKA++TV DF+ L Sbjct 317 YQELRRLASWHEEAVAFSHFRDKDQVEVDVVLES-EGLMAGVEVKAASTVTGDDFKGLRK 375 Query 385 ARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 423 +D + + F GV+ Y G FGDRL A+PI+ LW G Sbjct 376 LKDAVQNNFAAGVVLYDGESVAGFGDRLYAVPISRLWAG 414 >gi|304311176|ref|YP_003810774.1| Predicted ATPase [gamma proteobacterium HdN1] gi|301796909|emb|CBL45122.1| Predicted ATPase [gamma proteobacterium HdN1] Length=406 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 158/412 (39%), Positives = 236/412 (58%), Gaps = 8/412 (1%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 +++R + + E E + VVLING RQ GK+TL Q+L E +LD A+A++D Sbjct 3 MLDRQIQTLILEALEDSPVVLINGARQTGKSTLAQRLSPE--RRYLTLDDPAVFAAAKSD 60 Query 70 PEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 P G+I + LDE+Q A + L LAIK D++R +F L+GST L +P +++SLA Sbjct 61 PFGFIANQTGKICLDEIQRAPE-LFLAIKAEVDKNRVAGRFLLTGSTNVLLLPQMADSLA 119 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVV 189 GR+ I++LWPLS +E G ++I LF + R+E++ GGFPEV Sbjct 120 GRMEIIELWPLSQSELQGRTIDLIT-LFYDGNF---QNSYRFERNEFITSLVNGGFPEVR 175 Query 190 QRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVI 249 R + R R WF YL T+ QRDVR+L I+ LP+ M+ LAA LN+AE +R Sbjct 176 TRASDRRREAWFDSYLLTILQRDVRDLANIDGLTELPKLMQLLAARNGSLLNMAELSRSS 235 Query 250 GVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLA 309 G+ T++ L L ET++LV R+PAW+ NL +++K K+ + D G AA L+G A ++ Sbjct 236 GIAQTTLKRYLTLLETLFLVRRVPAWASNLGTRLQKSPKLFLSDYGMAAHLQGLGAAAMQ 295 Query 310 RPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVK 369 G ++E FV EL K + + L L H+R G E+D +L+ +VGVEVK Sbjct 296 NKHGL-PGDLVEGFVHAELAKHQTWSSLRTHLMHYRTTTGVEVDFVLENRQQALVGVEVK 354 Query 370 ASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLW 421 A+ATV DF L RD +F G+L YTG + + F ++L+A+P+ + + Sbjct 355 AAATVVGKDFNGLRHLRDTAPKQFKRGILLYTGEQTIQFDEQLVAVPMGVFF 406 >gi|119356615|ref|YP_911259.1| AAA family ATPase [Chlorobium phaeobacteroides DSM 266] gi|119353964|gb|ABL64835.1| ATPase (AAA+ superfamily) [Chlorobium phaeobacteroides DSM 266] Length=412 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 160/413 (39%), Positives = 230/413 (56%), Gaps = 11/413 (2%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 LIE + E L + T VVL+ GPRQAGKTTL++Q+ E G +LD ++ SAR D Sbjct 10 LIEMRIAEALSD----TPVVLVAGPRQAGKTTLVRQMAIE-GMRYLTLDDELTLLSARND 64 Query 70 PEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 P G I S R +DE+Q A L+LAIK + D DRRP +F L+GS + +P +++SLA Sbjct 65 PVGMIRSLDR-AVIDEIQRA-PQLLLAIKKSVDDDRRPGRFLLTGSANVMALPAVADSLA 122 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVV 189 GR+ L L PLS +E G I F L PVT E +++ GG+PE + Sbjct 123 GRMETLTLLPLSQSELHGSTANWIDAAFAGR---LLKVTMPVTGEELVEIVLRGGYPEAI 179 Query 190 QRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVI 249 R R R+ W YL + QRDVR++ I++ D+LPRF+R LA I+ Q N + Sbjct 180 SRTDVRRRTVWVRQYLNAIIQRDVRDVASIDKLDQLPRFLRILAEISGQMCNYTNLGSQV 239 Query 250 GVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLA 309 G+D+ T + E +YL+ R+ W+RN +I K K+ +D+G A L A + Sbjct 240 GLDSKTASRYTGVLEQMYLLKRIEVWARNRLKRIIKTPKLQFIDAGLLATLLDLGATEVQ 299 Query 310 RPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVK 369 + + G I+ETFV EL+K + E + L ++RD D E+D +++ +++GVEVK Sbjct 300 QDRSR-FGKILETFVYGELLKHSSTAEDDYKLLYYRDFDMFEVDVVIENASGQLIGVEVK 358 Query 370 ASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 ASATVN D R L GD F G+L Y G +P GD + A+P++ LW Sbjct 359 ASATVNAGDLRGLKKLASVAGDLFKMGILLYDGTETMPLGDGMWAVPLSTLWG 411 >gi|167621599|ref|YP_001672107.1| hypothetical protein Caul_5329 [Caulobacter sp. K31] gi|167351722|gb|ABZ74448.1| conserved hypothetical protein [Caulobacter sp. K31] Length=407 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 156/412 (38%), Positives = 236/412 (58%), Gaps = 10/412 (2%) Query 13 RHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARADPEG 72 RH ++++RE TRVVL+ GPRQAGKTTL + L AE G +LD ++A+ADP G Sbjct 4 RHAIDRIREALSDTRVVLLAGPRQAGKTTLARSL-AEAGRTYLTLDDATTLSAAKADPAG 62 Query 73 YIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLAGRV 132 + + +DEVQ A D L+LAIK + DRD RP +F L+GS +T+P +++SLAGR+ Sbjct 63 LVRGLDK-AVIDEVQRAPD-LLLAIKDSVDRDTRPGRFLLTGSANLMTLPRVADSLAGRM 120 Query 133 AILDLWPLSVAERSGVRP--EIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVVQ 190 + L PL+ +E G +P +A LF G + + L AGG+PE + Sbjct 121 ETIRLMPLAQSEILG-QPASRFLASLFAGQAPPPGPPRLGA---DLIDLVLAGGYPEALA 176 Query 191 RPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVIG 250 R R W+++Y+ V RDVR++ I+Q DR+PR +R LA + Q +N A + Sbjct 177 RKTWARRQDWYANYIEAVVGRDVRDIANIDQLDRMPRLLRALAEHSGQLINHAGVGASLD 236 Query 251 VDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLAR 310 ++ T + +FE ++LV LP W N ++ K+ K+H +DSG A LRG + + +A Sbjct 237 LNHVTTQKYTGVFEQLFLVRTLPPWHNNALKRLTKKPKLHFLDSGLLAALRGLTPERVAA 296 Query 311 PTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVKA 370 + G ++ETFV E++KL ++ L HFRD++ E+D +L+ ++VG+EVK Sbjct 297 DRSN-FGAVLETFVFAEVLKLTGWSDERFSLSHFRDKEQDEVDIVLEDRQGKIVGLEVKG 355 Query 371 SATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 SATV DF L +GD F G + Y + +PFG+RL A P++ LW Sbjct 356 SATVRSEDFAGLRKLAQAVGDRFAFGAVLYDYEQVVPFGERLAAAPLSSLWG 407 >gi|153012018|ref|YP_001373230.1| hypothetical protein Oant_4815 [Ochrobactrum anthropi ATCC 49188] gi|151563906|gb|ABS17401.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188] Length=406 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 159/413 (39%), Positives = 232/413 (57%), Gaps = 11/413 (2%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 LIE + E L + T VVLI GPR+AGKTT+ +++ E+G +LD +AR+D Sbjct 5 LIEHRVEEALSD----TPVVLIVGPRRAGKTTIARKM-GEIGRTYITLDDQTALEAARSD 59 Query 70 PEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 P G+I +DE+Q A + L+LAIK D D RP +F L+GS LT+P +++SLA Sbjct 60 PAGFIRGLDL-AIIDEIQRAPE-LLLAIKKTVDEDYRPGRFLLTGSANVLTLPRVADSLA 117 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVV 189 GR+ + + PL+ AE +G P + +LF G + + +Q +GGFPE + Sbjct 118 GRMETIRMLPLARAEINGQMPTFLERLFAGKHQGNGE---AIVGDDLIQFVLSGGFPEAI 174 Query 190 QRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVI 249 R + R R W YL +V RD+R++ IE+ LP+F+R LA + Q +N ++ I Sbjct 175 SRESERRRQDWARSYLTSVLTRDLRDIAEIEKLTELPKFVRLLAEHSGQLVNYSQFGSSI 234 Query 250 GVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLA 309 V T + +AL E V+LV L W N +I K K+H +DSG A RG + D + Sbjct 235 NVSHKTGQRYVALLEQVFLVSTLQPWYTNALKRIAKTPKLHFLDSGLLATARGLTFDRV- 293 Query 310 RPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVK 369 + G ++E+FV E++KL A++L V YHFRD+ E+D +L+ D +VG+EVK Sbjct 294 KADRGTFGALLESFVFAEVLKLMDASDLRVTPYHFRDQQMHEVDIVLERDDGMIVGIEVK 353 Query 370 ASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 ASATV DF L D D F GV+ Y +PFGDRL A P++ LW+ Sbjct 354 ASATVRSSDFAGLRTLADACKDRFAYGVVLYDSKDVVPFGDRLSAAPLSALWS 406 >gi|323138759|ref|ZP_08073824.1| hypothetical protein Met49242DRAFT_3212 [Methylocystis sp. ATCC 49242] gi|322396006|gb|EFX98542.1| hypothetical protein Met49242DRAFT_3212 [Methylocystis sp. ATCC 49242] Length=406 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 153/412 (38%), Positives = 234/412 (57%), Gaps = 7/412 (1%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 + +R + + E T VVLI GPR+AGKTTL++++ E G +LD +A +D Sbjct 1 MFQRFVERRAEEALADTPVVLIVGPRRAGKTTLVRKM-GETGWTYSTLDDQTVLEAAHSD 59 Query 70 PEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 P G+I R +DE+Q A L+LAIK + D D RP +F L+GS LT+P +++SLA Sbjct 60 PAGFIRGLDR-AIIDEIQRA-PSLLLAIKKSIDEDYRPGRFLLTGSANVLTLPRVADSLA 117 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVV 189 GR+ + + PL+ AE P + +LF L ++ + E ++L GGFPE + Sbjct 118 GRMETIRMLPLARAEIENRTPTFLERLFAGN---LQSQKNAIVGDELIRLILLGGFPEAI 174 Query 190 QRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVI 249 R + R R W YL ++ RD+R++ +E+ LP+F+R LA + Q +N ++ A I Sbjct 175 SRDSERRRQDWARSYLTSILTRDLRDIAEVEKLTELPKFVRLLAEHSGQLVNYSQLASGI 234 Query 250 GVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLA 309 V+ T + + L E V+L+ L W N +I K K+H +DSG A RG + D + Sbjct 235 NVNHRTGQRYVGLLEQVFLIATLQPWFTNALKRIVKTPKLHFLDSGLLAAARGLTFDRI- 293 Query 310 RPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVK 369 + G ++E+FV +E++KL A++L + +HFRDRD RE+D +L+ D + +EVK Sbjct 294 KADRGAFGALLESFVFSEVLKLMTASDLRLTPHHFRDRDMREVDIVLERDDGMIAAIEVK 353 Query 370 ASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLW 421 ASATV DF L + GD F GV+ Y + +PFGDRL A P++ LW Sbjct 354 ASATVKASDFSGLRALAEACGDRFAFGVILYDSSDIVPFGDRLAAAPLSSLW 405 >gi|256830086|ref|YP_003158814.1| ATPase AAA [Desulfomicrobium baculatum DSM 4028] gi|256579262|gb|ACU90398.1| AAA family ATPase [Desulfomicrobium baculatum DSM 4028] Length=418 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 157/418 (38%), Positives = 229/418 (55%), Gaps = 13/418 (3%) Query 9 ELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARA 68 +L R + +L E VVLI+GPRQ GKTTL +Q S D DV+RA+A+ Sbjct 5 DLYPRFIRPRLVEALADAPVVLIHGPRQCGKTTLARQAGEAADFAYLSFDDDVQRAAAQT 64 Query 69 DPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESL 128 DP GY+ P LDE+Q + L A+K A D R P +F L+GS L +P L++SL Sbjct 65 DPVGYVADLPARVILDEIQRVPE-LFTALKAAVDARREPGRFILTGSANVLLIPRLADSL 123 Query 129 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRH----EYLQLACAGG 184 AGR+ IL L PL+ AE +G PE + P ++ G A +T + + AGG Sbjct 124 AGRMEILRLHPLAQAELAGKNPEFL------PALLQGRFKAGITGQRLGRDLAERVAAGG 177 Query 185 FPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAE 244 +P ++R + + R+ W+ DY T+ QRD+R+L RI Q LPR + A TA+ LNV++ Sbjct 178 YPPALKRSSAKRRAVWYRDYAETLVQRDIRDLARISQMGALPRLLTLAAGQTARLLNVSD 237 Query 245 AARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQS 304 A V TIR + L ++L+ LP W N +++ K K+H+ D+G A L G Sbjct 238 LAAPFQVTRPTIREYVTLLSRIFLLEELPPWHSNRLSRLIKTPKLHLGDTGLACALLGLD 297 Query 305 ADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVV 364 A +L A G ++ETFV EL + + V H+RD+D E+D +L+ R+ Sbjct 298 AGTLWNDRAV-FGQMLETFVYQELRRQAGWLDDAVSFSHYRDKDKTEVDIVLEC-GGRIA 355 Query 365 GVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 GVEVKAS+TV DF+ L + + + F+ G++ Y G +PFG +L A+PI LW Sbjct 356 GVEVKASSTVTGDDFKGLRKLQQAVENRFVAGIVMYDGEAVVPFGSQLYAVPICSLWE 413 >gi|194335302|ref|YP_002017096.1| ATPase [Pelodictyon phaeoclathratiforme BU-1] gi|194307779|gb|ACF42479.1| ATPase (AAA+ superfamily) [Pelodictyon phaeoclathratiforme BU-1] Length=412 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 159/421 (38%), Positives = 233/421 (56%), Gaps = 13/421 (3%) Query 4 DEAGH--ELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDV 61 ++A H LIE + E L + T VVL+ GPRQAGKTTL++Q+ E G +LD ++ Sbjct 2 NKASHYSRLIEMRIAEALAD----TPVVLVAGPRQAGKTTLVRQMAIE-GMRYLTLDDEL 56 Query 62 ERASARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTV 121 SAR DP G I S +DE+Q A L+LAIK + D DRRP +F L+GS + + Sbjct 57 TLLSARNDPVGMIRSLD-CAVIDEIQRA-PQLLLAIKKSVDEDRRPGRFLLTGSANLMVL 114 Query 122 PTLSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLAC 181 P +++SLAGR+ L L PLS +E G I F + + PVT E ++ Sbjct 115 PAVADSLAGRMETLTLLPLSQSELHGSTANWIDAAFAGRLLKV---TMPVTGDELCEVVL 171 Query 182 AGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELN 241 GG+PE + R R R+ W YL + QRDVR++ I++ D+LPRF+R LA I+ Q N Sbjct 172 RGGYPEAISRTDARRRTVWARQYLNAIIQRDVRDVASIDKLDQLPRFLRILAEISGQMCN 231 Query 242 VAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLR 301 + +G+D+ T + E +YL+ R+ W+RN ++ K K+ +D+G A L Sbjct 232 YTKLGGQVGLDSKTASRYTGVLEQMYLLKRIEVWARNRLKRVVKTPKLQFIDAGLLATLL 291 Query 302 GQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDS 361 A + + + G I+ETFV +EL+K + E + L ++RD D E+D +++ Sbjct 292 DLGATEVQQDRSR-FGKILETFVYSELLKHSSTAEGDYKLLYYRDLDMFEVDMVIENASG 350 Query 362 RVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLW 421 +++GVEVKASATVN D R L G F G+L Y G +P GD L A P++ LW Sbjct 351 QLIGVEVKASATVNAGDLRGLKKLASVAGGLFKMGILLYDGTETMPLGDGLWAAPLSTLW 410 Query 422 N 422 Sbjct 411 G 411 >gi|54024733|ref|YP_118975.1| hypothetical protein nfa27640 [Nocardia farcinica IFM 10152] gi|54016241|dbj|BAD57611.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=441 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 161/421 (39%), Positives = 233/421 (56%), Gaps = 12/421 (2%) Query 7 GHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWL-RSLDVDVERAS 65 G + + RH + ++E E TRVV++NG RQ GK+TL + + + R LD R + Sbjct 25 GVDYLPRHAAQLVKEALEDTRVVIVNGARQTGKSTLAEHCVKDHPNVVKRYLDDPRTRDA 84 Query 66 ARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLS 125 A DP + + AP +DEVQ D L LAIK DRD RP +F L+GS R L + +L Sbjct 85 AADDPVAF-LDAPGLMLIDEVQRVPD-LWLAIKHTVDRDPRPGRFLLTGSARLLGLSSLP 142 Query 126 ESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGF 185 +++ GR ++L+PLS E SG I FT + L + + R +YL LA GG+ Sbjct 143 DAMPGRSETIELFPLSQGEISGAPDGFIDAAFTYGRH-LEIPDSGLRRRDYLALAARGGY 201 Query 186 PEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEA 245 PE V R + R R+++ YL + RD+R++ I++ + R + LAA + LN Sbjct 202 PESVHRTSDRRRAQFARSYLDDIMTRDIRQVADIQRAADMRRLIVTLAAQSGGLLNYDRL 261 Query 246 ARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSA 305 A + + A TIR+ +A+ E +YLV +PAWS N T + K+ DSG A L Sbjct 262 ASALSMPASTIRNYVAILELIYLVRLVPAWSANATMRAVATPKVVFTDSGLAGHL----- 316 Query 306 DSLARPTAEGA-GPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVV 364 LA T + G ++ETFVI EL + + L+H+RDRDG E+D +L+ +VV Sbjct 317 --LAGITNDATTGGLLETFVIGELTRQLTWSHSLAQLHHYRDRDGHEVDALLENNAGQVV 374 Query 365 GVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNGQ 424 +EVKA+ TV DFR L + RLGD F G + Y G + LPFGD+L ALPI+ LW + Sbjct 375 AIEVKAAETVRSEDFRGLRHLQRRLGDRFHAGFVLYCGDQQLPFGDQLAALPISALWTAE 434 Query 425 S 425 + Sbjct 435 N 435 >gi|298529035|ref|ZP_07016438.1| AAA family ATPase [Desulfonatronospira thiodismutans ASO3-1] gi|298510471|gb|EFI34374.1| AAA family ATPase [Desulfonatronospira thiodismutans ASO3-1] Length=408 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 155/403 (39%), Positives = 219/403 (55%), Gaps = 11/403 (2%) Query 26 TRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARADPEGYIMSAPRPTFLDE 85 T VVLI+GPRQ GKTTL + + G S D DV+R++A+ DP GY+ P LDE Sbjct 11 TPVVLIHGPRQCGKTTLARLVGDARGFTYLSFDDDVQRSAAQFDPVGYVADLPEQVILDE 70 Query 86 VQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLAGRVAILDLWPLSVAER 145 VQ + L ++K D R+P +F L+GS L VP L++SLAGR+AIL L PLS AE Sbjct 71 VQRVPE-LFTSLKAVVDERRKPGRFILTGSAHVLMVPRLADSLAGRMAILRLHPLSRAEI 129 Query 146 SGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA---CAGGFPEVVQRPAGRARSRWFS 202 +G + LF G R + LA AGG+P + R R R+ W+ Sbjct 130 AGKPAAFLNALFGR-----GFRIGVFGRRQGRVLAEHITAGGYPAALSRTTARRRTAWYR 184 Query 203 DYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVIGVDAGTIRSDLAL 262 DY+ T+ QRDV +L RI + D +PR + A TA+ +NV++ A V TIR L L Sbjct 185 DYIDTLVQRDVLDLTRISRLDVMPRLLEMAAGQTARLINVSDMASPFQVSRPTIREYLTL 244 Query 263 FETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLARPTAEGAGPIMET 322 ++L+ LP W N +++ K K+H+ D G A L G A SL + A G ++ET Sbjct 245 LSRIFLLEELPPWHSNRLSRLIKTPKLHLGDPGLACALLGVDAGSLWQDRAL-FGQLLET 303 Query 323 FVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVKASATVNVHDFRHL 382 F++ EL + E ++ HFRD+D E+D +L++ ++ G+EVKA +TV DF L Sbjct 304 FILQELRRQAGWQEDDISFSHFRDKDNNEVDMVLES-GGKLAGIEVKAGSTVTSSDFNGL 362 Query 383 SFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNGQS 425 + F GV+ Y G +PFG L A+PI+ LW G Sbjct 363 QKLQRAAEKSFTAGVVLYDGDSVVPFGKDLYAVPISCLWGGSG 405 >gi|307947366|ref|ZP_07662700.1| AAA family ATPase [Roseibium sp. TrichSKD4] gi|307769508|gb|EFO28735.1| AAA family ATPase [Roseibium sp. TrichSKD4] Length=408 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 148/420 (36%), Positives = 234/420 (56%), Gaps = 17/420 (4%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 + R ++ E TRVVLI+GPRQ+GKTTL ++ +E +L D +V R SA D Sbjct 1 MYSRFAKAKVEEALSDTRVVLISGPRQSGKTTLATEIASEKVPFLTLDDANVLR-SAIDD 59 Query 70 PEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLA 129 P G++ R +DEVQ A D L+LAIK D D+ +F L+GS +T+P +++SLA Sbjct 60 PVGFVRGLDRAV-IDEVQRAPD-LLLAIKNLVDDDKTSGRFLLTGSANLMTIPKVADSLA 117 Query 130 GRVAILDLWPLSVAERSGVRPEIIAQLF-----TEPQVVLGTEPAPVTRHEYLQLACAGG 184 GR+ ++ L+PLS AE G + I + F Q+VLG + ++ +GG Sbjct 118 GRMEVVRLFPLSQAEIFGTKTRFIDEAFAGETPNAGQMVLG--------DDLVENVLSGG 169 Query 185 FPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAE 244 +PE + R + W+ Y+ + QRDV+++ +IEQ +P+ M LA Q +N + Sbjct 170 YPEALGRTRWTRKQDWYHSYVDAIVQRDVQDVAQIEQLAIMPKLMSALAEHAGQLVNYSG 229 Query 245 AARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQS 304 + ++ T R +++FE++YLVH L W N ++ K K+H +D+G A +R S Sbjct 230 IGAGLNLNHVTTRKYVSVFESLYLVHTLQPWFTNRLKRLTKSPKLHFLDAGLLAAMRDIS 289 Query 305 ADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVV 364 D + R G I+ETFV +EL K+ + +E HFRD+D E+D +L+ VV Sbjct 290 PD-VVRKDKTSFGAILETFVFSELRKIASWSEQRCTFSHFRDKDKNEVDIVLENRRGEVV 348 Query 365 GVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNGQ 424 G+EVK+SATV+ DF + + G +FI G++ Y + +PFG+ + A P++ LW + Sbjct 349 GIEVKSSATVSAADFSGMRKLAEACGKKFIQGMVLYDHDKVVPFGENMFAAPLSCLWGSK 408 >gi|85707504|ref|ZP_01038581.1| predicted ATPase (AAA+ superfamily protein) [Roseovarius sp. 217] gi|85667984|gb|EAQ22868.1| predicted ATPase (AAA+ superfamily protein) [Roseovarius sp. 217] Length=408 Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 145/408 (36%), Positives = 229/408 (57%), Gaps = 13/408 (3%) Query 18 QLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARADPEGYIMSA 77 ++ E TRVVLI+GPRQ+GKTTL + ++ +L D +V R SA DP G++ Sbjct 9 RVEEALSDTRVVLISGPRQSGKTTLATDIASDKTPFLTLDDANVLR-SAINDPIGFVRGL 67 Query 78 PRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLAGRVAILDL 137 R +DE+Q A D L+LAIK D D+ P +F L+GS +T+P ++SLAGR+ ++ L Sbjct 68 DRAV-IDEIQRAPD-LLLAIKNLVDDDKTPGRFLLTGSANLMTIPKAADSLAGRMEVVRL 125 Query 138 WPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAP---VTRHEYLQLACAGGFPEVVQRPAG 194 PLS AE G + + I + FT G +P + E + GG+PE + R Sbjct 126 LPLSQAEILGTKSDFIDRAFT------GEKPTADHMIIGDELVINVLTGGYPEALSRTRW 179 Query 195 RARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVIGVDAG 254 + W+ YL + QRDVR++ +IEQ +P+ M LA + Q +N + ++ Sbjct 180 SRKQDWYHSYLDAIVQRDVRDVAQIEQLAIMPKLMSVLAEHSGQLVNYTGIGAGLDLNHV 239 Query 255 TIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLARPTAE 314 T + +++FE++YLVH L W N ++ K K+H +D+G A +R S + + + Sbjct 240 TTQKYVSVFESLYLVHTLKPWFTNRLKRLTKSPKLHFLDAGLLAAMRDVSPEVVGKDKTS 299 Query 315 GAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVKASATV 374 G I+ETFV +EL K+ +E HFRD+D E+D +L+ VVG+EVK+SATV Sbjct 300 -FGAILETFVFSELRKIATWSEQRCTFSHFRDKDKNEVDIVLENRRGEVVGIEVKSSATV 358 Query 375 NVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 + DF + D G++F+ G++ Y + +PFG+ + A P++ LW+ Sbjct 359 SAGDFSGMRKLADACGEKFVQGMVLYDHDKVVPFGENMFAAPLSCLWS 406 >gi|336120953|ref|YP_004575740.1| hypothetical protein MLP_53230 [Microlunatus phosphovorus NM-1] gi|334688752|dbj|BAK38337.1| hypothetical protein MLP_53230 [Microlunatus phosphovorus NM-1] Length=421 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 158/422 (38%), Positives = 228/422 (55%), Gaps = 7/422 (1%) Query 5 EAGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERA 64 E +L+ER + + + VVL+ GPR GK+TLL L LGG + LD R Sbjct 2 ETSGDLVERRIFPVAIDRCAESPVVLLEGPRTVGKSTLLMALAGRLGGDVLDLDDVDMRT 61 Query 65 SARADPEGYIMSAPRPTFLDEVQCAGDPLIL-AIKTATDRDRRPRQFFLSGSTRFLTVPT 123 + R DP + P P +DE Q A P++L AIK +R RP QF L+GS R ++P Sbjct 62 AVRRDPAAMV-DGPGPVLIDEYQHA--PIVLDAIKARLNRSSRPGQFVLTGSARHESLPR 118 Query 124 LSESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAG 183 +++L GR+ L + PLS E +++ L P + + TR +Y+ G Sbjct 119 AAQALTGRLQRLPVLPLSQVELEHSESDLLLGLLNGPAEAIVAPASTSTRQDYVDRVARG 178 Query 184 GFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVA 243 GFP + ARSRW +++R +RDV EL R+ Q LP + LA TAQ LN A Sbjct 179 GFPLALAAHDASARSRWIDEWVRLTLERDVEELSRVRQAHLLPLVLERLAGQTAQVLNGA 238 Query 244 EAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQ 303 + A +G++ T R + L E V+LV LP+W R LT + R K H++DSG AA L Sbjct 239 QLAGDLGINERTARDYIRLLEAVFLVRMLPSWDRTLTKRTTARPKAHLIDSGVAARLLRL 298 Query 304 SADSLARP---TAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPD 360 ++D LA G ++E+FV+ E++ + T+ H+R RDG E+D +++T D Sbjct 299 TSDKLASKDPAVLTQFGHLLESFVVGEVLAQASWTDGISSAGHWRTRDGVEVDLVIETDD 358 Query 361 SRVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLL 420 RVV E+KA++ + DF L RD LGD FI GV+ YTGAR+ + DRL +PI+ L Sbjct 359 GRVVAFEIKAASRASGSDFPGLRSLRDHLGDAFIAGVVLYTGARSYTYEDRLHVMPIDRL 418 Query 421 WN 422 W Sbjct 419 WQ 420 >gi|317123484|ref|YP_004097596.1| hypothetical protein Intca_0315 [Intrasporangium calvum DSM 43043] gi|315587572|gb|ADU46869.1| hypothetical protein Intca_0315 [Intrasporangium calvum DSM 43043] Length=434 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 152/418 (37%), Positives = 234/418 (56%), Gaps = 8/418 (1%) Query 10 LIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARAD 69 L+ R + E L + V+ ++GPR GK+T+L++ A++GG + LD D+ A Sbjct 6 LVPRRVSELLAGLVAVEPVIALHGPRSVGKSTVLRRFAADVGGSVLDLD-DIAVREAVVG 64 Query 70 PEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRR-PRQFFLSGSTRFLTVPTLSESL 128 + P P +DE Q D ++ A+K +R+ P ++GSTR +P +++L Sbjct 65 NLASVAGGPAPVCVDEYQRVPD-ILDALKARLNREGSLPGTAVITGSTRQDALPATAQAL 123 Query 129 AGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVT-RHEYLQLACAGGFPE 187 GR+ L +WPLS E G+R +++ L + V+ P+ T R +Y++ CAGG P Sbjct 124 TGRLHSLTIWPLSQGEIVGIREDLLETLGADADGVVSQVPSSKTVRRDYVERVCAGGLPL 183 Query 188 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 247 ++R +G AR+RWF D++R +RD EL RI + + + +AA T Q LN++ AA Sbjct 184 ALRR-SGAARARWFDDFVRASVERDALELSRIRERQAMTELLGLVAAQTGQLLNLSAAAE 242 Query 248 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 307 +GV T+ S L L E ++LV RLPAW + L +++ + K+HVVDSG AA L + D Sbjct 243 KLGVSRATVESHLRLLEDLFLVVRLPAWGKTLRSRVSVKPKVHVVDSGLAARLLRLTPDK 302 Query 308 LAR---PTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVV 364 LA + G ++ETFV+ E+ K + + V L H+R DG E+D +++ D VV Sbjct 303 LAGLDPASLADFGHLLETFVVGEIRKQASWLDEPVTLGHWRTSDGVEVDLVIEYDDGTVV 362 Query 365 GVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 VEVKAS DFR L+ RD LG F G++ TGAR+ + DRL +PI+ LW Sbjct 363 AVEVKASERAPGSDFRGLAQLRDALGPRFAGGIILTTGARSYTYSDRLHVMPIDRLWT 420 >gi|120537108|ref|YP_957165.1| AAA family ATPase [Marinobacter aquaeolei VT8] gi|120326943|gb|ABM21250.1| ATPase, AAA+ superfamily [Marinobacter aquaeolei VT8] Length=412 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 148/414 (36%), Positives = 222/414 (54%), Gaps = 19/414 (4%) Query 18 QLREVAEYTRVVLINGPRQAGKTTLLQQLHAELG--GWLR-SLDVDVERASARADPEGYI 74 ++E T VV + GPRQAGKTTL++ L ++G W +LD + A+ADP G++ Sbjct 9 NVKEALSDTPVVFVMGPRQAGKTTLVKSLIMDMGSENWTYITLDDQAQFEIAQADPVGFV 68 Query 75 MSAPRPTF-LDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLAGRVA 133 + P LDEVQ + L ++IK A D R P +F L+GS L +P LS+SLAGR+ Sbjct 69 RNLPSTRIALDEVQRLPE-LFVSIKQAVDEQRSPGRFLLTGSANALLLPRLSDSLAGRME 127 Query 134 ILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVT-----RHEYLQLACAGGFPEV 188 + L LS E G +P + +L E AP T R LQ G FPE Sbjct 128 SVRLMTLSECEIQGRQPSFLIKLLREE--------APSTQDIRVRDHLLQRLVTGCFPEP 179 Query 189 VQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARV 248 +QR R R W+ Y T+ QRD+R+L I+ D + + ++ A + +N+ E Sbjct 180 LQRANERRRQAWYQQYTSTLIQRDIRDLTHIDHPDLMAKLLKLTAFYAGKLVNLTELGGK 239 Query 249 IGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSL 308 +G+D TI+ +AL E ++LV +LPAW N ++ K K+H VD+G +RG + + L Sbjct 240 LGLDRLTIKKYMALLEQLFLVEQLPAWHSNEYKRLVKTPKLHPVDTGMMCAVRGLNQERL 299 Query 309 ARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEV 368 + + G ++E+FV NEL K + ++ YH+RD+D E+D +++ +E+ Sbjct 300 LKQPGD-FGLVLESFVYNELRKQSVWIDEPLNFYHYRDKDKVEVDVVIENTMGDCFAIEI 358 Query 369 KASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 KA+AT+N DF L + GD F GVL Y G FGD L A+P+ LW+ Sbjct 359 KAAATLNTKDFTGLKRFQSVAGDRFKIGVLLYDGDHTTAFGDNLYAVPVGALWS 412 >gi|116751278|ref|YP_847965.1| AAA family ATPase [Syntrophobacter fumaroxidans MPOB] gi|116700342|gb|ABK19530.1| ATPase, AAA+ superfamily [Syntrophobacter fumaroxidans MPOB] Length=415 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 163/414 (40%), Positives = 229/414 (56%), Gaps = 11/414 (2%) Query 13 RHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASARADPEG 72 R + ++ E + VVLI+GPRQ GKTTL + + + G + D DV+RA+A+ADP G Sbjct 9 RFLRPRIEEALADSPVVLIHGPRQCGKTTLARLVGDDSGFATFTFDDDVQRAAAQADPVG 68 Query 73 YIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLAGRV 132 Y+ P LDEVQ + L ++K A D R+P +F L+GS L VP L++SLAGR+ Sbjct 69 YVADLPERAVLDEVQRVPE-LFTSLKAAVDTRRKPGRFILTGSANVLLVPKLADSLAGRM 127 Query 133 AILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLA---CAGGFPEVV 189 IL L PLS AE P+ + +LF G + P R L+ GGFP + Sbjct 128 EILRLHPLSQAEVERKTPDFLRRLFAA-----GLKAGPSGRRLGKALSERVVGGGFPAAL 182 Query 190 QRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVI 249 R R R+ W+ DY T+ QRD+R+L RI D LPR + A TA +NV+E A Sbjct 183 ARANQRRRTAWYRDYGDTLIQRDIRDLARISALDALPRLLALAAGQTACLMNVSELAAPF 242 Query 250 GVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLA 309 + TIR L L ++L+ L W N ++ K K+H+ D+G A L G + D+L Sbjct 243 QISRQTIREYLTLLSRIFLLDELSPWHGNRMKRLVKTPKLHMGDTGLACALLGLNGDTLW 302 Query 310 RPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVK 369 + G ++ETFV EL + + E+ V HFRD+D E+D +L++ + RV GVEVK Sbjct 303 ADRSL-FGRLLETFVYQELRRHASWREVAVAFSHFRDKDQVEVDVVLES-EGRVAGVEVK 360 Query 370 ASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWNG 423 A++TV DF+ L RD + F GV+ Y G FGDRL A+PI+ LW G Sbjct 361 AASTVTGDDFKGLRKLRDAVQKNFAAGVVLYDGDAVAGFGDRLHAVPISQLWEG 414 >gi|158317994|ref|YP_001510502.1| hypothetical protein Franean1_6254 [Frankia sp. EAN1pec] gi|158113399|gb|ABW15596.1| conserved hypothetical protein [Frankia sp. EAN1pec] Length=430 Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 159/424 (38%), Positives = 230/424 (55%), Gaps = 10/424 (2%) Query 9 ELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGG-WLRSLDVDVERASAR 67 EL R + TRVV++NG RQ GK+TL Q + G LD + RA+A Sbjct 9 ELFPRRAAALVSAALADTRVVVVNGARQVGKSTLAQLTAGQHGNAQAYYLDEESTRAAAT 68 Query 68 ADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSES 127 ADP G+ ++ +DE+Q + L+LAIK DRD+ P +F L+GS R + + ++ Sbjct 69 ADPIGF-LNHHGLLMIDEIQRVPE-LLLAIKREVDRDQSPGRFLLTGSARLWGLRGIPDT 126 Query 128 LAGRVAILDLWPLSVAERSGVRPEIIAQLFTE------PQVVLGTEPAPVTRHEYLQLAC 181 L GR ++LWPL+ E G + +F + P V L + R +Y+ A Sbjct 127 LPGRSETVELWPLAQGEIDGGPDGFVDAVFADDDLGADPSVDLDLASGALRRDDYVGRAL 186 Query 182 AGGFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELN 241 GGFPE V+R R R+R+F Y+ + RD+R++ IE+T L R ++ LAA T+ + Sbjct 187 RGGFPEAVRRADPRRRARFFESYISDLIARDIRQIAEIERTSELRRLVQALAANTSGLVV 246 Query 242 VAEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLR 301 + + V A T+ + E VYLV R+PAWS NLT + K+ +VDSG A L Sbjct 247 PRRLSNDLDVSASTVARHIEALELVYLVQRIPAWSSNLTTRAVATPKLILVDSGLAGHLT 306 Query 302 GQSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDS 361 G ++ + PTA GP++E FV+ EL + + V L+H+RDRD E+D +L+ Sbjct 307 GMTSRRASHPTAP-VGPLLENFVLGELARQLTWADEPVALFHYRDRDRNEVDAVLERASG 365 Query 362 RVVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLW 421 VVG+EVKA+ TV DFR L D++GD F G + Y GA LPFG R+ A PI+ LW Sbjct 366 EVVGIEVKAAETVRAEDFRGLRRLADQIGDRFRAGYVLYAGAEVLPFGPRMRAAPISTLW 425 Query 422 NGQS 425 S Sbjct 426 TTGS 429 >gi|225155795|ref|ZP_03724282.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] gi|224803447|gb|EEG21683.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] Length=400 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 141/360 (40%), Positives = 201/360 (56%), Gaps = 11/360 (3%) Query 66 ARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLS 125 A++DP ++ +DE+Q + L+L IK D R R+F L+GS LT+P LS Sbjct 36 AKSDPITFVAQLNEHAAIDEIQRTPE-LLLPIKKMIDEARETRRFLLTGSANILTLPKLS 94 Query 126 ESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTE--PQVVLGTEPAPVTRHEYLQLACAG 183 ESLAGR+ I LWPLS E G++ + I F++ PQ P P ++ +YL+ G Sbjct 95 ESLAGRMEIHTLWPLSQGEIRGIKEKFIDFAFSDAPPQ-----SPQPFSQTDYLEAIIYG 149 Query 184 GFPEVV-QRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNV 242 G+PE + Q AGR WF+ YL T+ QRD++E+ RIE LP + +A+ +NV Sbjct 150 GYPEALAQMRAGRG-PEWFNSYLATILQRDIQEISRIEGLADLPNLLEIIASRAGNLINV 208 Query 243 AEAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRG 302 A+ +R+ ++A T++ + L E V+L+ +PAW+RN + K K+ V D+G +LRG Sbjct 209 ADISRITRLNAVTLKRYMTLLEMVFLIVEIPAWARNAEKRFVKSPKVFVNDTGLLCYLRG 268 Query 303 QSADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSR 362 + +L R + G ++E FV+ EL K EL+ L HFR G E+D +L+ D R Sbjct 269 LNQQALERERSL-LGSVLENFVVMELAKQCGWAELKCGLLHFRTHGGDEVDIVLEAADKR 327 Query 363 VVGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 V GVEVKAS VN DF L GD F G L YTG L + + L ALPI LWN Sbjct 328 VTGVEVKASMDVNPSDFSGLRALSKAAGDRFHRGFLLYTGNDILQYANNLWALPICSLWN 387 >gi|336177068|ref|YP_004582443.1| hypothetical protein FsymDg_1018 [Frankia symbiont of Datisca glomerata] gi|334858048|gb|AEH08522.1| hypothetical protein FsymDg_1018 [Frankia symbiont of Datisca glomerata] Length=401 Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 156/398 (40%), Positives = 214/398 (54%), Gaps = 7/398 (1%) Query 26 TRVVLINGPRQAGKTTLLQ-QLHAELGGWLRSLDVDVERASARADPEGYIMSAPRPTFLD 84 TRVV ING RQAGK+TL + A +R LD +A DP G+I +D Sbjct 7 TRVVAINGARQAGKSTLARLAASATANPLIRLLDDPATLRAAHDDPTGFI-DHDDLLVVD 65 Query 85 EVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLAGRVAILDLWPLSVAE 144 EVQ A + L IK A D D RP +F L GS + L + L ++L GR+ ++LWP S E Sbjct 66 EVQLAPE-LFRVIKVAVDTDPRPGRFLLIGSAQILALRDLPDALPGRIETIELWPFSQGE 124 Query 145 RSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVVQRPAGRARSRWFSDY 204 G + FT + + +P+ R +YL+ GG+PE V+R + R R+ +F Y Sbjct 125 IDGTPDRFVDAAFTHGPGL--SRTSPLRRRDYLERIVRGGYPEAVRR-SPRRRTAFFDSY 181 Query 205 LRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVIGVDAGTIRSDLALFE 264 L T+ RDV EL I++ L + + LA+ + L A G+ T+ L L Sbjct 182 LSTLIARDVTELSAIQRRGELHQLLALLASRSGGLLVPGALASQSGIPRTTLNRYLDLLS 241 Query 265 TVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLARPTAEGAGPIMETFV 324 V+L+ +PAWS T + K+ VDSG A L GQ A L P AGP++E FV Sbjct 242 AVFLIKLVPAWSTGHTHRAVGTPKLAYVDSGIACHLLGQDAARLGEPDGT-AGPMVENFV 300 Query 325 INELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVKASATVNVHDFRHLSF 384 + EL + + E LYH+R +D E+D +L+TPD RVVG+EVKA ATV D L Sbjct 301 LTELARQLSWNEQSARLYHYRTKDKVEVDALLETPDGRVVGIEVKAGATVRGEDLAGLRH 360 Query 385 ARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 + LG F+ G + YTG + LPFGDRL ALP++ LWN Sbjct 361 LANLLGPRFVAGYVLYTGQQTLPFGDRLSALPLDALWN 398 >gi|251771011|gb|EES51595.1| ATPase (AAA+ superfamily)-like protein [Leptospirillum ferrodiazotrophum] Length=418 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 147/419 (36%), Positives = 228/419 (55%), Gaps = 10/419 (2%) Query 6 AGHELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERAS 65 G L R ++++ + T VVL+ GPRQAGK+TL+QQ +LD S Sbjct 5 GGPSLYPRFSADRIKTALKDTPVVLLIGPRQAGKSTLVQQFSRGDDRTYLTLDDQNVLLS 64 Query 66 ARADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLS 125 A+ DPEG + S R T +DE+Q A D L+L IK + D+DRRP +F L+GS LT+PT+S Sbjct 65 AQRDPEGLLSSRQRLT-IDEIQRAPD-LLLTIKKSVDQDRRPGRFLLTGSADILTLPTVS 122 Query 126 ESLAGRVAILDLWPLSVAERSGVRPEIIAQLFTE--PQVVLGTEPAPVTRHEYLQLACAG 183 ESLAGR+ I+ L PLS AE + P + F P++ G + G Sbjct 123 ESLAGRMEIISLLPLSHAEIAAAPPSFLKLAFEGRLPEISTGDGGTSIRES-----VLTG 177 Query 184 GFPEVVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVA 243 G+PE++ R R RW YL + RDV E+ IE+ + L R R + + + Q N Sbjct 178 GYPEILTRTDPERRMRWAKSYLDALFSRDVGEISGIEKHETLSRLFRLVVSRSGQIPNFT 237 Query 244 EAARVIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQ 303 + +G++ T + + L E ++LVHRL W NL+++I K KI+ +DSG + + G Sbjct 238 QWGGTLGLNDKTTKRYVFLLEQLFLVHRLEPWQTNLSSRILKSPKIYALDSGLQSLVTGL 297 Query 304 SADSLARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRV 363 + + L R + G ++ETFV++E+ K + L H+RD++ E+D + + R+ Sbjct 298 TREKLDRDRSL-YGSLLETFVVSEIKKQSEWYSESLFLSHYRDKEHNEVDLLCEDRSGRI 356 Query 364 VGVEVKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 V +E+KAS TV D R + R+ LG+ + ++ + G R LP GD + P+++LW Sbjct 357 VAIEIKASMTVTPADLRGIKKLREILGERLVLALVLHEGTRTLPLGDNIFTAPVSILWG 415 >gi|56476325|ref|YP_157914.1| ATPase [Aromatoleum aromaticum EbN1] gi|56312368|emb|CAI07013.1| predicted ATPase (AAA+ superfamily) [Aromatoleum aromaticum EbN1] Length=497 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 153/415 (37%), Positives = 227/415 (55%), Gaps = 7/415 (1%) Query 8 HELIERHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVDVERASAR 67 H L R + ++ E T VVL+ GPRQAGKTTL++Q+ A+ G +LD ++ +A+ Sbjct 89 HSLYPRLIEARIAEAMADTPVVLVAGPRQAGKTTLVRQIAAQ-GMRYLTLDDELTLLAAK 147 Query 68 ADPEGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSES 127 DP G I S R +DE+Q A L+LAIK D DRRP +F L+GS + +PT+++S Sbjct 148 EDPVGMIRSLDR-AVIDEIQRAPQ-LLLAIKKTVDEDRRPGRFLLTGSANLMALPTVADS 205 Query 128 LAGRVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPE 187 LAGR+ L L PLS +E G I F +L A V + ++ GG+PE Sbjct 206 LAGRMETLTLLPLSQSEMHGSTANWIDSAFAGQ--ILKVRRAMVG-DDLVEAVLRGGYPE 262 Query 188 VVQRPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAAR 247 V R R R+ W YL + QRDVR++ I++ D+LPRF+R LA ++ Q N + Sbjct 263 AVSRATVRRRTAWVRQYLDAIIQRDVRDVAGIDKLDQLPRFLRALAQVSGQMCNYTQLGG 322 Query 248 VIGVDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADS 307 +G+D T + +FE +YL+ R+ W++N ++ K K+ +DSG + L + Sbjct 323 QVGLDHKTAARYIGVFEQMYLLKRIEVWAKNRLNRVVKTPKVQFIDSGLLSTL-ADVTPA 381 Query 308 LARPTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVE 367 LA+ G ++ETFV EL+K E + L ++RD D E+D +++ +++GVE Sbjct 382 LAQQDRGRFGNVLETFVFGELLKHTTTAEGDYQLLYYRDHDQFEVDFVIENAAGQLIGVE 441 Query 368 VKASATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 VKA+ATV D R L G + GV+ Y G LP GD L A P+ LW Sbjct 442 VKAAATVRESDLRGLKRLASIAGAQVKLGVILYDGMETLPLGDGLWAAPLASLWG 496 >gi|297157562|gb|ADI07274.1| hypothetical protein SBI_04153 [Streptomyces bingchenggensis BCW-1] Length=393 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 151/396 (39%), Positives = 220/396 (56%), Gaps = 7/396 (1%) Query 28 VVLINGPRQAGKTTLLQQLHAEL-GGWLRSLDVDVERASARADPEGYIMSAPRPTFLDEV 86 +VL+NG RQAGK+TL + A LR LD +A DP G++ +DE+ Sbjct 1 MVLVNGARQAGKSTLTRLTAARRRDPVLRLLDDAATLRAAMDDPTGFV-EHDSMMLIDEI 59 Query 87 QCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLAGRVAILDLWPLSVAERS 146 Q A + L+ AIK A D D P +F L+GS+R L + TL ++L GR+ +++LWP S E S Sbjct 60 QLAPE-LLRAIKVAVDLDPTPGRFLLTGSSRILAMRTLPDALPGRMEVIELWPFSQGEIS 118 Query 147 GVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVVQRPAGRARSRWFSDYLR 206 G + FT + T + + + +YL A GGFPE V+R R R+ +F+ YL Sbjct 119 GGPDRFVDAAFTHGPGLSCT--SALRKRDYLDRAVVGGFPEAVKRTP-RRRTAFFNAYLS 175 Query 207 TVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVIGVDAGTIRSDLALFETV 266 T+ +RDV EL IE+ + + + LA T L A A G+ T+ L L +V Sbjct 176 TLVERDVLELASIERHGEILKLLGLLAGRTGGLLVPAALATASGIPRTTLVRYLELLTSV 235 Query 267 YLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLARPTAEGAGPIMETFVIN 326 +L+ +PAW+ LT + K+ VD+G A L GQ A LA P AG ++E FV+ Sbjct 236 FLIKTIPAWTSGLTGRTVGTGKLAFVDTGIACHLTGQDAARLAEPDG-AAGAMLENFVVM 294 Query 327 ELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVKASATVNVHDFRHLSFAR 386 EL + +E + L+H+R +D E+D +++TP V+G+EVKA ATV D L Sbjct 295 ELARQLTWSEQQGRLFHYRTKDKVEVDAVIETPRGDVIGIEVKAGATVRTEDLSGLRNLA 354 Query 387 DRLGDEFITGVLFYTGARALPFGDRLMALPINLLWN 422 + LGD F+ G + YTG + LPFGDR+ ALP++ LW Sbjct 355 NLLGDRFVAGYVLYTGQQTLPFGDRIRALPMDALWQ 390 >gi|320450333|ref|YP_004202429.1| AAA+ super family ATPase [Thermus scotoductus SA-01] gi|320150502|gb|ADW21880.1| ATPase, AAA+ superfamily [Thermus scotoductus SA-01] Length=409 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 158/411 (39%), Positives = 226/411 (55%), Gaps = 16/411 (3%) Query 13 RHMLEQLREVAEYTRVVLINGPRQAGKTTLLQQLHAELGGWLRSLDVD--VERASARADP 70 R + +L E + T VV + G RQ GK+TL++ L G+ R L +D + ASA+ DP Sbjct 9 RFLTPRLLEALQDTPVVFLAGARQVGKSTLVRSL-----GYGRYLTLDDPLVLASAQHDP 63 Query 71 EGYIMSAPRPTFLDEVQCAGDPLILAIKTATDRDRRPRQFFLSGSTRFLTVPTLSESLAG 130 G++ + P LDEVQ A L+ AIK D DRRP +F L+GS L +P S L G Sbjct 64 LGFLQAQEGPLVLDEVQRAPG-LLRAIKLLVDEDRRPGRFLLTGSANVLVLPQASGELVG 122 Query 131 RVAILDLWPLSVAERSGVRPEIIAQLFTEPQVVLGTEPAPVTRHEYLQLACAGGFPEVVQ 190 R+ +L LWPLS E G + + LF+ P+ V+ E + GGFPE V Sbjct 123 RMEVLTLWPLSQGELEGKEEKFLDLLFS-PRFPSAGRLEAVSLEERV---FRGGFPEAVT 178 Query 191 RPAGRARSRWFSDYLRTVTQRDVRELKRIEQTDRLPRFMRYLAAITAQELNVAEAARVIG 250 R GR R WF YL+ + +RD+R+L RI + +P+ + LA +N +E AR G Sbjct 179 R-KGRRRQAWFEAYLKALLERDLRDLSRIHRLLEVPKVLGLLALRLGSPMNQSEVARGAG 237 Query 251 VDAGTIRSDLALFETVYLVHRLPAWSRNLTAKIKKRSKIHVVDSGFAAWLRGQSADSLAR 310 + T+R LAL E ++LV R+PAW+ ++ K K++ VDSG AA L LA Sbjct 238 LPLSTLRDYLALLEALFLVVRVPAWTPGGEGRLVKAPKLYFVDSGLAASL--LRYGGLAL 295 Query 311 PTAEGAGPIMETFVINELMKLRAATELEVDLYHFRDRDGREIDCILQTPDSRVVGVEVKA 370 A GP++E FV+ E++K +++ +LYHFR G+E+D +L+ + RVVG+EVKA Sbjct 296 DQASSFGPLLENFVVLEILKGLGWSQVAPNLYHFRTHTGQEVDLVLEW-EGRVVGLEVKA 354 Query 371 SATVNVHDFRHLSFARDRLGDEFITGVLFYTGARALPFGDRLMALPINLLW 421 S T+ + DF L R D F+ GV+ Y G L L+A+PI LW Sbjct 355 SRTLGLRDFSGLKALRSLAKDRFLRGVVLYGGEEILAVERDLLAVPIQALW 405 Lambda K H 0.322 0.137 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 877435408584 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40