BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3181c
Length=150
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610317|ref|NP_217697.1| hypothetical protein Rv3181c [Mycob... 300 6e-80
gi|289763365|ref|ZP_06522743.1| conserved hypothetical protein [... 260 4e-68
gi|145223606|ref|YP_001134284.1| prevent-host-death family prote... 218 2e-55
gi|308232363|ref|ZP_07415836.2| hypothetical protein TMAG_03643 ... 159 1e-37
gi|334338128|ref|YP_004543280.1| prevent-host-death family prote... 66.6 1e-09
gi|269957801|ref|YP_003327590.1| prevent-host-death family prote... 63.5 8e-09
gi|229821891|ref|YP_002883417.1| prevent-host-death family prote... 54.7 4e-06
gi|284992147|ref|YP_003410701.1| prevent-host-death family prote... 53.9 7e-06
gi|312198894|ref|YP_004018955.1| prevent-host-death family prote... 45.4 0.003
gi|169830280|ref|YP_001716262.1| prevent-host-death family prote... 45.1 0.004
gi|94264547|ref|ZP_01288333.1| Prevent-host-death protein [delta... 44.7 0.005
gi|94266351|ref|ZP_01290052.1| Prevent-host-death protein [delta... 43.9 0.008
gi|291453640|ref|ZP_06593030.1| predicted protein [Streptomyces ... 43.1 0.015
gi|334318721|ref|YP_004551280.1| prevent-host-death family prote... 42.4 0.020
gi|284117863|ref|ZP_06386758.1| hypothetical protein POR_1362 [C... 42.4 0.024
gi|343918886|gb|EGV29645.1| prevent-host-death family protein [T... 42.0 0.027
gi|198284676|ref|YP_002220997.1| prevent-host-death family prote... 42.0 0.029
gi|291439187|ref|ZP_06578577.1| predicted protein [Streptomyces ... 42.0 0.034
gi|88811964|ref|ZP_01127217.1| hypothetical protein NB231_06226 ... 41.6 0.043
gi|302864893|ref|YP_003833530.1| prevent-host-death family prote... 40.8 0.063
gi|148554239|ref|YP_001261821.1| prevent-host-death family prote... 40.8 0.065
gi|15964065|ref|NP_384418.1| hypothetical protein SMc00392 [Sino... 40.4 0.084
gi|218295857|ref|ZP_03496637.1| prevent-host-death family protei... 40.4 0.094
gi|336178810|ref|YP_004584185.1| prevent-host-death family prote... 40.0 0.11
gi|110347341|ref|YP_666158.1| prevent-host-death family protein ... 40.0 0.11
gi|87124593|ref|ZP_01080442.1| hypothetical protein RS9917_13305... 40.0 0.12
gi|336178691|ref|YP_004584066.1| prevent-host-death family prote... 40.0 0.13
gi|29833644|ref|NP_828278.1| hypothetical protein SAV_7102 [Stre... 39.7 0.13
gi|288917439|ref|ZP_06411805.1| prevent-host-death family protei... 39.7 0.13
gi|257095100|ref|YP_003168741.1| prevent-host-death family prote... 39.7 0.14
gi|258593455|emb|CBE69794.1| conserved protein of unknown functi... 39.7 0.15
gi|339484745|ref|YP_004696531.1| prevent-host-death family prote... 39.7 0.15
gi|88812277|ref|ZP_01127528.1| hypothetical protein NB231_02718 ... 39.7 0.15
gi|344201299|ref|YP_004785625.1| prevent-host-death family prote... 39.7 0.16
gi|297624924|ref|YP_003706358.1| prevent-host-death family prote... 39.3 0.17
gi|87124252|ref|ZP_01080101.1| hypothetical protein RS9917_11600... 38.9 0.23
gi|163794610|ref|ZP_02188581.1| Prevent-host-death protein [alph... 38.9 0.24
gi|291295839|ref|YP_003507237.1| prevent-host-death family prote... 38.9 0.25
gi|167644701|ref|YP_001682364.1| prevent-host-death family prote... 38.9 0.26
gi|302561917|ref|ZP_07314259.1| axe family addiction module anti... 38.5 0.31
gi|333982412|ref|YP_004511622.1| prevent-host-death family prote... 38.5 0.35
gi|326778888|ref|ZP_08238153.1| prevent-host-death family protei... 38.5 0.36
gi|302551944|ref|ZP_07304286.1| predicted protein [Streptomyces ... 38.1 0.41
gi|341583891|ref|YP_004764382.1| hypothetical protein Rh054_0377... 38.1 0.43
gi|333999173|ref|YP_004531785.1| hypothetical protein TREPR_1163... 38.1 0.43
gi|67459123|ref|YP_246747.1| antitoxin of toxin-antitoxin system... 38.1 0.44
gi|168699435|ref|ZP_02731712.1| Prevent-host-death protein [Gemm... 38.1 0.44
gi|88813611|ref|ZP_01128842.1| hypothetical protein NB231_12886 ... 38.1 0.46
gi|115525240|ref|YP_782151.1| prevent-host-death family protein ... 38.1 0.46
gi|16332080|ref|NP_442808.1| hypothetical protein ssl1004 [Synec... 38.1 0.47
>gi|15610317|ref|NP_217697.1| hypothetical protein Rv3181c [Mycobacterium tuberculosis H37Rv]
gi|15842761|ref|NP_337798.1| hypothetical protein MT3272 [Mycobacterium tuberculosis CDC1551]
gi|31794359|ref|NP_856852.1| hypothetical protein Mb3207c [Mycobacterium bovis AF2122/97]
52 more sequence titles
Length=150
Score = 300 bits (767), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 150/150 (100%), Positives = 150/150 (100%), Gaps = 0/150 (0%)
Query 1 MQLGRKVTSHHDIDRFGVASTADESVYRPLPPRLRLAQVNLSRRRCRTQSDMYKSRFSEC 60
MQLGRKVTSHHDIDRFGVASTADESVYRPLPPRLRLAQVNLSRRRCRTQSDMYKSRFSEC
Sbjct 1 MQLGRKVTSHHDIDRFGVASTADESVYRPLPPRLRLAQVNLSRRRCRTQSDMYKSRFSEC 60
Query 61 TVQSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIG 120
TVQSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIG
Sbjct 61 TVQSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIG 120
Query 121 KATAQRPVAAGRPRPRPQRPVSDRVSDQRR 150
KATAQRPVAAGRPRPRPQRPVSDRVSDQRR
Sbjct 121 KATAQRPVAAGRPRPRPQRPVSDRVSDQRR 150
>gi|289763365|ref|ZP_06522743.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289710871|gb|EFD74887.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=151
Score = 260 bits (665), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/155 (89%), Positives = 138/155 (90%), Gaps = 9/155 (5%)
Query 1 MQLGRKVTSHHDIDRFGVASTADESVYRPLPPRLRLAQVNLSRRRCRTQSDMYKSRFSEC 60
MQLGRKVTSHHDIDRFGVASTADESVYRPLPPRLRLAQVNLSRRRCRTQSDMYKSRFSEC
Sbjct 1 MQLGRKVTSHHDIDRFGVASTADESVYRPLPPRLRLAQVNLSRRRCRTQSDMYKSRFSEC 60
Query 61 TVQSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIG 120
TVQSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIG
Sbjct 61 TVQSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIG 120
Query 121 KATAQRPVAAGRPRPRPQRPVS-----DRVSDQRR 150
KATAQRP R R Q P + VSDQRR
Sbjct 121 KATAQRP----RSRGTAQAPTAAAGCLTGVSDQRR 151
>gi|145223606|ref|YP_001134284.1| prevent-host-death family protein [Mycobacterium gilvum PYR-GCK]
gi|145216092|gb|ABP45496.1| prevent-host-death family protein [Mycobacterium gilvum PYR-GCK]
Length=151
Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/155 (77%), Positives = 128/155 (83%), Gaps = 9/155 (5%)
Query 1 MQLGRKVTSHHDIDRFGVASTADESVYRPLPPR---LR--LAQVNLSRRRCRTQSDMYKS 55
MQLGRK TSH DIDR GV STADESVYRP+ R LR ++QV ++ SDMYKS
Sbjct 1 MQLGRKATSHRDIDRLGVTSTADESVYRPVADRASGLRRSISQVVVAA----LSSDMYKS 56
Query 56 RFSECTVQSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTA 115
FSECTV V+VSVTELRAHLSDWLDRARAGGEVVIT+RGIP+ARLAALDS TLERLTA
Sbjct 57 WFSECTVYGVEVSVTELRAHLSDWLDRARAGGEVVITDRGIPVARLAALDSAGTLERLTA 116
Query 116 EGVIGKATAQRPVAAGRPRPRPQRPVSDRVSDQRR 150
EGVIGKATAQRPVAA R P+P+RPVSDRVSDQRR
Sbjct 117 EGVIGKATAQRPVAAARSGPQPRRPVSDRVSDQRR 151
>gi|308232363|ref|ZP_07415836.2| hypothetical protein TMAG_03643 [Mycobacterium tuberculosis SUMu001]
gi|308370177|ref|ZP_07420561.2| hypothetical protein TMBG_01874 [Mycobacterium tuberculosis SUMu002]
gi|308371259|ref|ZP_07424368.2| hypothetical protein TMCG_01600 [Mycobacterium tuberculosis SUMu003]
22 more sequence titles
Length=82
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/82 (99%), Positives = 82/82 (100%), Gaps = 0/82 (0%)
Query 69 VTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIGKATAQRPV 128
+TELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIGKATAQRPV
Sbjct 1 MTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIGKATAQRPV 60
Query 129 AAGRPRPRPQRPVSDRVSDQRR 150
AAGRPRPRPQRPVSDRVSDQRR
Sbjct 61 AAGRPRPRPQRPVSDRVSDQRR 82
>gi|334338128|ref|YP_004543280.1| prevent-host-death family protein [Isoptericola variabilis 225]
gi|334108496|gb|AEG45386.1| prevent-host-death family protein [Isoptericola variabilis 225]
Length=95
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/64 (49%), Positives = 48/64 (75%), Gaps = 0/64 (0%)
Query 65 VDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIGKATA 124
++VSV+ LRA L W+++ARAG EVVIT+RG+P+ARL+ + + D + L +G++ A A
Sbjct 1 MEVSVSALRAELKSWIEKARAGEEVVITDRGVPVARLSGVATADLVTGLVRDGLLTPAQA 60
Query 125 QRPV 128
+RPV
Sbjct 61 ERPV 64
>gi|269957801|ref|YP_003327590.1| prevent-host-death family protein [Xylanimonas cellulosilytica
DSM 15894]
gi|269306482|gb|ACZ32032.1| prevent-host-death family protein [Xylanimonas cellulosilytica
DSM 15894]
Length=91
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/64 (44%), Positives = 47/64 (74%), Gaps = 0/64 (0%)
Query 65 VDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIGKATA 124
++V+V+ LRA L W++RAR G EV+IT+RG+P+ARL+ + + D ++ L +G++ A
Sbjct 1 MEVAVSALRAELKSWIERARQGEEVIITDRGLPVARLSGIGAADLVQGLVRDGLLTPAQV 60
Query 125 QRPV 128
+RPV
Sbjct 61 ERPV 64
>gi|229821891|ref|YP_002883417.1| prevent-host-death family protein [Beutenbergia cavernae DSM
12333]
gi|229567804|gb|ACQ81655.1| prevent-host-death family protein [Beutenbergia cavernae DSM
12333]
Length=84
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/69 (43%), Positives = 40/69 (58%), Gaps = 0/69 (0%)
Query 65 VDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIGKATA 124
+DV V+ LRA L W+ A G +VVITERG+P+ARL + D + L +G++ T
Sbjct 1 MDVPVSTLRAELKHWIALAGEGEDVVITERGVPVARLTPVAGADLIADLERDGLLAAPTT 60
Query 125 QRPVAAGRP 133
RP RP
Sbjct 61 PRPRVEARP 69
>gi|284992147|ref|YP_003410701.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
gi|284065392|gb|ADB76330.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
Length=85
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/89 (42%), Positives = 51/89 (58%), Gaps = 12/89 (13%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIGKA---- 122
V + ELR LS +L + RAG V +T+ G P+AR+ +D + LERL AEG++ A
Sbjct 4 VGIRELRDGLSRYLAQVRAGRTVTVTDHGRPVARIVPVDESSPLERLIAEGLVQPARQRE 63
Query 123 -TAQRPVAAGRPRPRPQRPVSDRVSDQRR 150
+A RPV A VSD V++QRR
Sbjct 64 RSAPRPVEA-------SGTVSDLVAEQRR 85
>gi|312198894|ref|YP_004018955.1| prevent-host-death family protein [Frankia sp. EuI1c]
gi|311230230|gb|ADP83085.1| prevent-host-death family protein [Frankia sp. EuI1c]
Length=84
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/88 (41%), Positives = 48/88 (55%), Gaps = 8/88 (9%)
Query 65 VDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIGKATA 124
+DV + +LR +LS L RAG + IT+ G IARL + LE+L AEGV+ A +
Sbjct 1 MDVGIRDLRDNLSRHLAEVRAGRTLTITDHGRAIARLVPVAKPTRLEQLIAEGVVEPARS 60
Query 125 QRPVAAGRPRPRPQRP---VSDRVSDQR 149
+ R PRP VSD VS+QR
Sbjct 61 R-----TRTSPRPVEADGIVSDLVSEQR 83
>gi|169830280|ref|YP_001716262.1| prevent-host-death family protein [Candidatus Desulforudis audaxviator
MP104C]
gi|169637124|gb|ACA58630.1| prevent-host-death family protein [Candidatus Desulforudis audaxviator
MP104C]
Length=94
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (47%), Positives = 31/45 (69%), Gaps = 0/45 (0%)
Query 62 VQSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDS 106
++ ++V V E +A LS+ L ARAG V+ITERGIP AR+ ++
Sbjct 1 MEEINVGVREAKAKLSELLRYARAGKTVIITERGIPTARIVPIEK 45
>gi|94264547|ref|ZP_01288333.1| Prevent-host-death protein [delta proteobacterium MLMS-1]
gi|93455032|gb|EAT05263.1| Prevent-host-death protein [delta proteobacterium MLMS-1]
Length=117
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/37 (63%), Positives = 26/37 (71%), Gaps = 0/37 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAA 103
VSV E ++HLS LD AG E+VIT RG PIARL A
Sbjct 28 VSVAEAKSHLSALLDAVLAGEEIVITRRGKPIARLQA 64
>gi|94266351|ref|ZP_01290052.1| Prevent-host-death protein [delta proteobacterium MLMS-1]
gi|93453065|gb|EAT03547.1| Prevent-host-death protein [delta proteobacterium MLMS-1]
Length=131
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (35%), Positives = 39/64 (61%), Gaps = 5/64 (7%)
Query 62 VQSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDT-----LERLTAE 116
+++ V V E +A LS +L G EV+IT+RG+P+ ++ + + ++ L++L E
Sbjct 36 MKTATVGVREAKASLSKYLKIVGQGVEVIITDRGVPVGKIVPIPAGESSLAQRLQKLEQE 95
Query 117 GVIG 120
GVIG
Sbjct 96 GVIG 99
>gi|291453640|ref|ZP_06593030.1| predicted protein [Streptomyces albus J1074]
gi|291356589|gb|EFE83491.1| predicted protein [Streptomyces albus J1074]
Length=170
Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/90 (34%), Positives = 46/90 (52%), Gaps = 5/90 (5%)
Query 27 YRPLPPRLRLAQVNLSRRR---CRTQSDMYKSRFSECTVQSVD--VSVTELRAHLSDWLD 81
YRP P L + +RRR + + S + V++V+ VSV E RAHL++ ++
Sbjct 41 YRPPVPLLPRCRDAGNRRRTLPSMPEHQEHASGVARAAVEAVENSVSVREARAHLAEHIN 100
Query 82 RARAGGEVVITERGIPIARLAALDSTDTLE 111
RA +G V+T G P+A L + LE
Sbjct 101 RAESGTPTVVTRNGAPVAALVPFADFEVLE 130
>gi|334318721|ref|YP_004551280.1| prevent-host-death family protein [Sinorhizobium meliloti AK83]
gi|334321424|ref|YP_004557964.1| prevent-host-death family protein [Sinorhizobium meliloti AK83]
gi|334099148|gb|AEG57157.1| prevent-host-death family protein [Sinorhizobium meliloti AK83]
gi|334100212|gb|AEG58220.1| prevent-host-death family protein [Sinorhizobium meliloti AK83]
Length=80
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/88 (36%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query 63 QSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIGKA 122
SV V V E +AHLS+ L R AG EV+I+ P+A+L+ + + L L AE
Sbjct 1 MSVTVKVAEAKAHLSELLARVEAGEEVIISRGSDPVAKLSRIHKDNELGILMAE------ 54
Query 123 TAQRPVAAGRPRPRPQRPVSDRVSDQRR 150
V A R R +P +D + D +R
Sbjct 55 -----VRAARFRAKP--VTNDEILDWKR 75
>gi|284117863|ref|ZP_06386758.1| hypothetical protein POR_1362 [Candidatus Poribacteria sp. WGA-A3]
gi|283829478|gb|EFC33845.1| hypothetical protein POR_1362 [Candidatus Poribacteria sp. WGA-A3]
Length=97
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/91 (32%), Positives = 54/91 (60%), Gaps = 10/91 (10%)
Query 68 SVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDS----TDTLERLTAEGVIGKAT 123
+V++L+ LS +L + + G EV+ITE G PIARL +++ ++ L+ + +G++ +
Sbjct 6 TVSQLKTSLSAYLRQVKTGEEVLITEYGRPIARLLPIENSVSLSEHLQDMEKKGLLKR-- 63
Query 124 AQRPVAA---GRPRPR-PQRPVSDRVSDQRR 150
++P++A PRP PQ V V +R+
Sbjct 64 GEKPLSADFWNLPRPADPQGAVRSAVLSERK 94
>gi|343918886|gb|EGV29645.1| prevent-host-death family protein [Thiorhodococcus drewsii AZ1]
Length=83
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/44 (46%), Positives = 27/44 (62%), Gaps = 0/44 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTL 110
VS+ + HLS +L+R G EV+IT RG PIARL ++ L
Sbjct 5 VSIRDANQHLSRYLERVEQGAEVIITRRGKPIARLMPIEPASRL 48
>gi|198284676|ref|YP_002220997.1| prevent-host-death family protein [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218666488|ref|YP_002427350.1| prevent-host-death family protein [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198249197|gb|ACH84790.1| prevent-host-death family protein [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218518701|gb|ACK79287.1| prevent-host-death family protein [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|339833274|gb|EGQ61131.1| prevent-host-death family protein [Acidithiobacillus sp. GGI-221]
Length=80
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/35 (55%), Positives = 26/35 (75%), Gaps = 0/35 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARL 101
+++ E +AHLS LDR AG E+VIT RG P+AR+
Sbjct 7 IALAEAKAHLSHVLDRVEAGEELVITRRGKPVARV 41
>gi|291439187|ref|ZP_06578577.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
gi|291342082|gb|EFE69038.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
Length=102
Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/67 (36%), Positives = 34/67 (51%), Gaps = 5/67 (7%)
Query 46 CRTQSDMYKSRFSECTVQSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALD 105
R +D Y +E TV +V E RAHL+D ++RA G VIT G P+A + +
Sbjct 2 ARVHADAYTGVMTENTV-----TVREARAHLADHINRAEEGVPTVITRNGAPVAAVVPIS 56
Query 106 STDTLER 112
+ LE
Sbjct 57 DFEALEE 63
>gi|88811964|ref|ZP_01127217.1| hypothetical protein NB231_06226 [Nitrococcus mobilis Nb-231]
gi|88790848|gb|EAR21962.1| hypothetical protein NB231_06226 [Nitrococcus mobilis Nb-231]
Length=84
Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/41 (47%), Positives = 28/41 (69%), Gaps = 0/41 (0%)
Query 62 VQSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLA 102
+ S V+ E +AHLS +RA AG V+IT+RG P+A+L+
Sbjct 3 MDSTTVTFAEAKAHLSQLTERAAAGETVIITKRGKPVAQLS 43
>gi|302864893|ref|YP_003833530.1| prevent-host-death family protein [Micromonospora aurantiaca
ATCC 27029]
gi|315501179|ref|YP_004080066.1| prevent-host-death family protein [Micromonospora sp. L5]
gi|302567752|gb|ADL43954.1| prevent-host-death family protein [Micromonospora aurantiaca
ATCC 27029]
gi|315407798|gb|ADU05915.1| prevent-host-death family protein [Micromonospora sp. L5]
Length=92
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/76 (47%), Positives = 42/76 (56%), Gaps = 9/76 (11%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDT-LERLTAEGVIGKATAQ 125
++V EL H S L R RAG V +T+RG PIARL + + D L RL AE G+ATA
Sbjct 4 IAVRELNQHTSRVLARVRAGETVEVTDRGEPIARLVPVLAGDALLGRLVAE---GRATA- 59
Query 126 RPVAAGRPRPRPQRPV 141
P G P P PV
Sbjct 60 -PTTTG---PVPMPPV 71
>gi|148554239|ref|YP_001261821.1| prevent-host-death family protein [Sphingomonas wittichii RW1]
gi|148499429|gb|ABQ67683.1| prevent-host-death family protein [Sphingomonas wittichii RW1]
Length=80
Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/35 (52%), Positives = 25/35 (72%), Gaps = 0/35 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARL 101
+S+ E +AHLS+ +DR AG + IT RG P+ARL
Sbjct 4 ISLAEAKAHLSELVDRVEAGDSIDITRRGKPVARL 38
>gi|15964065|ref|NP_384418.1| hypothetical protein SMc00392 [Sinorhizobium meliloti 1021]
gi|334318339|ref|YP_004550958.1| prevent-host-death family protein [Sinorhizobium meliloti AK83]
gi|15073241|emb|CAC41749.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|333813642|gb|AEG06311.1| prevent-host-death family protein [Sinorhizobium meliloti BL225C]
gi|334097333|gb|AEG55344.1| prevent-host-death family protein [Sinorhizobium meliloti AK83]
gi|336035082|gb|AEH81014.1| prevent-host-death family protein [Sinorhizobium meliloti SM11]
Length=80
Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/38 (48%), Positives = 27/38 (72%), Gaps = 0/38 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAAL 104
V++ + +AHLS+ +DR AG + IT RG P+ARL A+
Sbjct 4 VNLADAKAHLSELVDRVEAGDSIEITRRGKPVARLTAV 41
>gi|218295857|ref|ZP_03496637.1| prevent-host-death family protein [Thermus aquaticus Y51MC23]
gi|218243595|gb|EED10123.1| prevent-host-death family protein [Thermus aquaticus Y51MC23]
Length=88
Score = 40.4 bits (93), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/83 (31%), Positives = 47/83 (57%), Gaps = 1/83 (1%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGVIGKATAQR 126
VSV+E + L + L + AG EV+I ++G+P+ARL+ + + L +L +G++ + +
Sbjct 4 VSVSEAQNRLFELLRQVEAGEEVLILDQGVPVARLSPVLGSARLIQLELQGLLRRGKG-K 62
Query 127 PVAAGRPRPRPQRPVSDRVSDQR 149
P P P P+ V + ++R
Sbjct 63 PHLEDLPLPTPKESVLRALLEER 85
>gi|336178810|ref|YP_004584185.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334859790|gb|AEH10264.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=95
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/74 (38%), Positives = 38/74 (52%), Gaps = 6/74 (8%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLA---ALDSTDTLERLTAEGVIGKAT 123
VS+ +L + W+DRA AG ++IT G P ARL +D L++L AEG + T
Sbjct 4 VSMRDLSHAVGTWVDRAHAGESIIITRNGRPWARLVPELTQTGSDYLDQLVAEGRVTVPT 63
Query 124 AQRPVAAGRPRPRP 137
A A P P P
Sbjct 64 AS---LADLPEPAP 74
>gi|110347341|ref|YP_666158.1| prevent-host-death family protein [Mesorhizobium sp. BNC1]
gi|110287517|gb|ABG65575.1| prevent-host-death family protein [Chelativorans sp. BNC1]
Length=80
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/38 (45%), Positives = 27/38 (72%), Gaps = 0/38 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAAL 104
+++ + +AHLS+ +DR AG + IT RG P+ARL A+
Sbjct 4 INLADAKAHLSELVDRVEAGDSIDITRRGKPVARLTAV 41
>gi|87124593|ref|ZP_01080442.1| hypothetical protein RS9917_13305 [Synechococcus sp. RS9917]
gi|86168165|gb|EAQ69423.1| hypothetical protein RS9917_13305 [Synechococcus sp. RS9917]
Length=87
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/63 (40%), Positives = 33/63 (53%), Gaps = 6/63 (9%)
Query 71 ELRAHLSDWLDRARAGGEVVITERGIPIARLAALD-----STDTLERLTAEGVIGKATAQ 125
+L+ HLS+WL R +AG EV +T PIAR+ A+ L+R GVI Q
Sbjct 3 DLKTHLSEWLGRVQAGEEVEVTSHRKPIARITAVKPAAPAPASPLQRAINAGVI-SWNGQ 61
Query 126 RPV 128
PV
Sbjct 62 NPV 64
>gi|336178691|ref|YP_004584066.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334859671|gb|AEH10145.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=94
Score = 40.0 bits (92), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/72 (42%), Positives = 39/72 (55%), Gaps = 5/72 (6%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALD-STDTLERLTAEGVIGKATAQ 125
V V EL + S ++R R G V +T+RG P+ARL ++ LERL AE G+ATA
Sbjct 4 VGVRELNQNTSQVIERVRRGETVEVTDRGHPVARLVPVERELSVLERLVAE---GQATAP 60
Query 126 RPVAAGRPRPRP 137
V G P P
Sbjct 61 S-VQVGEPLSMP 71
>gi|29833644|ref|NP_828278.1| hypothetical protein SAV_7102 [Streptomyces avermitilis MA-4680]
gi|29610768|dbj|BAC74813.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=91
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/76 (37%), Positives = 44/76 (58%), Gaps = 4/76 (5%)
Query 64 SVDVSVTELRAHLSDWLDRARAGGE-VVITERGIPIARLAALDSTDTLERLTA--EGVIG 120
+ ++ VT+ RA L+D ++R GGE VV+T G P+ L + + L++L A E V+
Sbjct 2 AYEIPVTQARAELADLINRVVYGGERVVVTRHGKPLVALVSAADLERLDKLDAAEEQVVS 61
Query 121 KATAQRPVAAGRPRPR 136
++ R VAA PR R
Sbjct 62 AVSSVREVAAA-PRER 76
>gi|288917439|ref|ZP_06411805.1| prevent-host-death family protein [Frankia sp. EUN1f]
gi|288351142|gb|EFC85353.1| prevent-host-death family protein [Frankia sp. EUN1f]
Length=98
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/72 (42%), Positives = 38/72 (53%), Gaps = 7/72 (9%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALD-STDTLERLTAEGVIGKATAQ 125
V V EL + S +DR R G + +T+RG P+ARL + T L+RL AEG A
Sbjct 10 VGVRELNQNTSQVIDRVRHGETIEVTDRGRPVARLVPIGRGTAALDRLVAEG-----RAI 64
Query 126 RPVAAGRPRPRP 137
PV G P P P
Sbjct 65 PPVTGG-PVPMP 75
>gi|257095100|ref|YP_003168741.1| prevent-host-death family protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047624|gb|ACV36812.1| prevent-host-death family protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length=76
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/34 (53%), Positives = 24/34 (71%), Gaps = 0/34 (0%)
Query 68 SVTELRAHLSDWLDRARAGGEVVITERGIPIARL 101
++ + R+HLS LD GGE+VIT RG P+ARL
Sbjct 5 TIADTRSHLSALLDEIAGGGEIVITRRGKPVARL 38
>gi|258593455|emb|CBE69794.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length=95
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/97 (35%), Positives = 49/97 (51%), Gaps = 10/97 (10%)
Query 59 ECTVQSVDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLA--ALDSTDTLERLTAE 116
E + VS+ EL++ LS +L +AG V I +RG PI R+ L D +E L
Sbjct 2 EGVTKCTRVSIRELKSRLSHYLRLVKAGESVEIADRGTPIGRIVPTILPIEDRIEALAQS 61
Query 117 GVIG----KATAQRPVAAGRPRPRPQRPVSDRVSDQR 149
G++ K T+ PVA R R +R V+D + + R
Sbjct 62 GLVLWNKRKLTSLAPVA----RVRGKRTVADLLIEDR 94
>gi|339484745|ref|YP_004696531.1| prevent-host-death family protein [Nitrosomonas sp. Is79A3]
gi|338806890|gb|AEJ03132.1| prevent-host-death family protein [Nitrosomonas sp. Is79A3]
Length=87
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/42 (39%), Positives = 29/42 (70%), Gaps = 0/42 (0%)
Query 65 VDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDS 106
+ +++ E + HLS ++++A AG E++I + G PIA+L L S
Sbjct 2 LTINIHEAQTHLSRFIEKAAAGEEIIIAKAGKPIAKLVPLHS 43
>gi|88812277|ref|ZP_01127528.1| hypothetical protein NB231_02718 [Nitrococcus mobilis Nb-231]
gi|88790528|gb|EAR21644.1| hypothetical protein NB231_02718 [Nitrococcus mobilis Nb-231]
Length=93
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/37 (52%), Positives = 27/37 (73%), Gaps = 0/37 (0%)
Query 65 VDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARL 101
++VSV EL+ LS++L R +AG E+ I RG P+ARL
Sbjct 1 MEVSVRELKNRLSEYLRRTQAGEEITIASRGRPVARL 37
>gi|344201299|ref|YP_004785625.1| prevent-host-death family protein [Acidithiobacillus ferrivorans
SS3]
gi|343776743|gb|AEM49299.1| prevent-host-death family protein [Acidithiobacillus ferrivorans
SS3]
Length=98
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 0/40 (0%)
Query 66 DVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALD 105
VS+ E HLS +++ A G E+++T+RG P+AR+A ++
Sbjct 5 HVSLREANQHLSKYIEMASHGSEIIVTKRGRPVARIAPIE 44
>gi|297624924|ref|YP_003706358.1| prevent-host-death family protein [Truepera radiovictrix DSM
17093]
gi|297166104|gb|ADI15815.1| prevent-host-death family protein [Truepera radiovictrix DSM
17093]
Length=78
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/39 (47%), Positives = 27/39 (70%), Gaps = 0/39 (0%)
Query 65 VDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAA 103
++V+V E +A LS+ + R G +V IT RG P+ARL+A
Sbjct 2 LEVTVAEAKAKLSEIIKRVEEGEQVTITRRGKPVARLSA 40
>gi|87124252|ref|ZP_01080101.1| hypothetical protein RS9917_11600 [Synechococcus sp. RS9917]
gi|86167824|gb|EAQ69082.1| hypothetical protein RS9917_11600 [Synechococcus sp. RS9917]
Length=85
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/73 (33%), Positives = 38/73 (53%), Gaps = 6/73 (8%)
Query 71 ELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDT-----LERLTAEGVIGKATAQ 125
+L+ HLS+WL R +AG V +T PIAR+ + D+ +++ GVI + Q
Sbjct 3 DLKTHLSEWLGRVQAGEVVEVTSHRKPIARIMTVKQADSEISSPMQKAIDAGVI-SWSGQ 61
Query 126 RPVAAGRPRPRPQ 138
+P + R PQ
Sbjct 62 KPNQSSCGRTAPQ 74
>gi|163794610|ref|ZP_02188581.1| Prevent-host-death protein [alpha proteobacterium BAL199]
gi|159180334|gb|EDP64857.1| Prevent-host-death protein [alpha proteobacterium BAL199]
Length=78
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/39 (44%), Positives = 26/39 (67%), Gaps = 0/39 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALD 105
V++ E + HLS +DR AG E+VI + G P+ARL ++
Sbjct 4 VNLYEAKTHLSSLVDRVAAGEEIVIAKNGTPMARLVPVE 42
>gi|291295839|ref|YP_003507237.1| prevent-host-death family protein [Meiothermus ruber DSM 1279]
gi|290470798|gb|ADD28217.1| prevent-host-death family protein [Meiothermus ruber DSM 1279]
Length=76
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/40 (43%), Positives = 26/40 (65%), Gaps = 0/40 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDS 106
V+V + + HLS L+R RAG E+++ + G P ARL L+
Sbjct 5 VNVGQAKTHLSSLLERVRAGEEIILAKNGQPYARLVPLEK 44
>gi|167644701|ref|YP_001682364.1| prevent-host-death family protein [Caulobacter sp. K31]
gi|167347131|gb|ABZ69866.1| prevent-host-death family protein [Caulobacter sp. K31]
Length=85
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/49 (45%), Positives = 34/49 (70%), Gaps = 1/49 (2%)
Query 65 VDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDST-DTLER 112
+++SVT+ +A L+D + RA AG +VV+T G P RL+A+ T DT+ R
Sbjct 1 MEISVTDAKAQLTDLVRRAEAGEDVVLTRHGRPAVRLSAVRPTGDTVSR 49
>gi|302561917|ref|ZP_07314259.1| axe family addiction module antitoxin [Streptomyces griseoflavus
Tu4000]
gi|302479535|gb|EFL42628.1| axe family addiction module antitoxin [Streptomyces griseoflavus
Tu4000]
Length=95
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/55 (44%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query 64 SVDVSVTELRAHLSDWLDRARAGGE-VVITERGIPIARLAALDSTDTLERLTAEG 117
+ ++ VT+ RA L+D ++R GGE VV+T G P L AL S D L RL +G
Sbjct 2 AYEIPVTQARAELADLINRVVYGGERVVVTRHGKP---LVALVSADDLRRLEEQG 53
>gi|333982412|ref|YP_004511622.1| prevent-host-death family protein [Methylomonas methanica MC09]
gi|333806453|gb|AEF99122.1| prevent-host-death family protein [Methylomonas methanica MC09]
Length=81
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/37 (55%), Positives = 25/37 (68%), Gaps = 0/37 (0%)
Query 65 VDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARL 101
V V+VTELR HL D+L + + G EV IT G IAR+
Sbjct 2 VSVNVTELRQHLPDYLKQVQDGEEVAITLHGKTIARI 38
>gi|326778888|ref|ZP_08238153.1| prevent-host-death family protein [Streptomyces cf. griseus XylebKG-1]
gi|326659221|gb|EGE44067.1| prevent-host-death family protein [Streptomyces griseus XylebKG-1]
Length=90
Score = 38.5 bits (88), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/70 (39%), Positives = 37/70 (53%), Gaps = 7/70 (10%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERG------IPIARLAAL-DSTDTLERLTAEGVI 119
V+V E RAHL+D ++RA G VIT G +PIA AL ++ D L AE V+
Sbjct 6 VTVREARAHLADHINRAEGGTPTVITRNGKPVAAVVPIADFNALEEAADVLLAREAEAVL 65
Query 120 GKATAQRPVA 129
+ P+A
Sbjct 66 AQGGPTVPMA 75
>gi|302551944|ref|ZP_07304286.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
gi|302469562|gb|EFL32655.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
Length=90
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/46 (44%), Positives = 27/46 (59%), Gaps = 0/46 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLER 112
V+V E RAHL+D ++RA G VIT G P+A + + D LE
Sbjct 6 VTVREARAHLADHINRAEEGVPTVITRNGAPVAAVVPIADFDALEE 51
>gi|341583891|ref|YP_004764382.1| hypothetical protein Rh054_03775 [Rickettsia heilongjiangensis
054]
gi|340808117|gb|AEK74705.1| hypothetical protein Rh054_03775 [Rickettsia heilongjiangensis
054]
Length=84
Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/45 (36%), Positives = 28/45 (63%), Gaps = 0/45 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLE 111
++ + + H S LDRA G E++IT+RG A++ +DS + +E
Sbjct 5 ITAFDAKTHFSKLLDRASKGEEILITKRGKAAAKIVPIDSHNNIE 49
>gi|333999173|ref|YP_004531785.1| hypothetical protein TREPR_1163 [Treponema primitia ZAS-2]
gi|333738387|gb|AEF83877.1| conserved domain protein [Treponema primitia ZAS-2]
Length=78
Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/35 (46%), Positives = 24/35 (69%), Gaps = 0/35 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARL 101
+ + + HLS+ LD + G + VIT+RG+PIARL
Sbjct 3 IGTFDAKTHLSEMLDEIQKGRDYVITKRGVPIARL 37
>gi|67459123|ref|YP_246747.1| antitoxin of toxin-antitoxin system Phd [Rickettsia felis URRWXCal2]
gi|67004656|gb|AAY61582.1| Antitoxin of toxin-antitoxin system Phd [Rickettsia felis URRWXCal2]
Length=84
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/45 (36%), Positives = 28/45 (63%), Gaps = 0/45 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLE 111
++ + + H S LDRA G E++IT+RG A++ +DS + +E
Sbjct 5 ITAFDAKTHFSKLLDRASKGEEILITKRGKAAAKIVPIDSHNNIE 49
>gi|168699435|ref|ZP_02731712.1| Prevent-host-death protein [Gemmata obscuriglobus UQM 2246]
Length=84
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/37 (49%), Positives = 24/37 (65%), Gaps = 0/37 (0%)
Query 65 VDVSVTELRAHLSDWLDRARAGGEVVITERGIPIARL 101
V V + E + LS+ LDR G E+VIT G+P+ARL
Sbjct 2 VTVGLYEAKTKLSELLDRVEGGEELVITRHGVPVARL 38
>gi|88813611|ref|ZP_01128842.1| hypothetical protein NB231_12886 [Nitrococcus mobilis Nb-231]
gi|88789116|gb|EAR20252.1| hypothetical protein NB231_12886 [Nitrococcus mobilis Nb-231]
Length=75
Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (63%), Gaps = 0/40 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDS 106
V+V E + HLS LD A AG E+++ + G P ARL L+
Sbjct 5 VNVHEAKTHLSRLLDEAHAGTEIILAKAGKPYARLVPLEK 44
>gi|115525240|ref|YP_782151.1| prevent-host-death family protein [Rhodopseudomonas palustris
BisA53]
gi|115519187|gb|ABJ07171.1| prevent-host-death family protein [Rhodopseudomonas palustris
BisA53]
Length=80
Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/38 (43%), Positives = 26/38 (69%), Gaps = 0/38 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAAL 104
+S+ + +AHLS+ +D+ AG + I RG P+ARL A+
Sbjct 4 ISLADAKAHLSELIDQVEAGDSIDIARRGKPVARLTAV 41
>gi|16332080|ref|NP_442808.1| hypothetical protein ssl1004 [Synechocystis sp. PCC 6803]
gi|1001389|dbj|BAA10879.1| ssl1004 [Synechocystis sp. PCC 6803]
gi|339275177|dbj|BAK51664.1| hypothetical protein SYNGTS_2916 [Synechocystis sp. PCC 6803]
Length=92
Score = 38.1 bits (87), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/52 (33%), Positives = 33/52 (64%), Gaps = 0/52 (0%)
Query 67 VSVTELRAHLSDWLDRARAGGEVVITERGIPIARLAALDSTDTLERLTAEGV 118
V+V ++ +L + L + G EV++ ++GIPIA+L L +++R ++ GV
Sbjct 18 VNVDQIEINLPELLYSIKPGEEVIVADQGIPIAKLVPLQRQKSVDRCSSLGV 69
Lambda K H
0.319 0.132 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129459908798
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40