BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3190c
Length=421
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610326|ref|NP_217706.1| hypothetical protein Rv3190c [Mycob... 863 0.0
gi|148824383|ref|YP_001289137.1| hypothetical protein TBFG_13210... 860 0.0
gi|31794364|ref|NP_856857.1| hypothetical protein Mb3212c [Mycob... 858 0.0
gi|15842768|ref|NP_337805.1| hypothetical protein MT3278 [Mycoba... 857 0.0
gi|289755306|ref|ZP_06514684.1| conserved hypothetical protein [... 857 0.0
gi|339633194|ref|YP_004724836.1| hypothetical protein MAF_31950 ... 856 0.0
gi|289444755|ref|ZP_06434499.1| LOW QUALITY PROTEIN: conserved h... 803 0.0
gi|298526663|ref|ZP_07014072.1| conserved hypothetical protein [... 707 0.0
gi|326955321|gb|AEA29014.1| hypothetical protein Psed_6951 [Pseu... 350 4e-94
gi|146337913|ref|YP_001202961.1| hypothetical protein BRADO0801 ... 243 5e-62
gi|86159964|ref|YP_466749.1| hypothetical protein Adeh_3546 [Ana... 240 4e-61
gi|147678777|ref|YP_001212992.1| hypothetical protein PTH_2442 [... 238 1e-60
gi|257093407|ref|YP_003167048.1| hypothetical protein CAP2UW1_18... 237 3e-60
gi|218779142|ref|YP_002430460.1| hypothetical protein Dalk_1289 ... 236 6e-60
gi|291287377|ref|YP_003504193.1| hypothetical protein Dacet_1467... 207 4e-51
gi|167621936|ref|YP_001676721.1| hypothetical protein Caul_5287 ... 206 5e-51
gi|296114713|ref|ZP_06833364.1| hypothetical protein GXY_03013 [... 204 2e-50
gi|256832727|ref|YP_003161454.1| hypothetical protein Jden_1502 ... 203 4e-50
gi|311742875|ref|ZP_07716683.1| conserved hypothetical protein [... 196 6e-48
gi|284046631|ref|YP_003396971.1| hypothetical protein Cwoe_5188 ... 191 2e-46
gi|295134630|ref|YP_003585306.1| hypothetical protein ZPR_2790 [... 183 4e-44
gi|319427531|gb|ADV55605.1| conserved hypothetical protein [Shew... 181 3e-43
gi|340619250|ref|YP_004737703.1| hypothetical protein zobellia_3... 169 6e-40
gi|75906144|ref|YP_313527.1| hypothetical protein pSci3_03 [Spir... 168 1e-39
gi|20807548|ref|NP_622719.1| hypothetical protein TTE1077 [Therm... 160 3e-37
gi|159904815|ref|YP_001548477.1| hypothetical protein MmarC6_042... 153 5e-35
gi|146301337|ref|YP_001195928.1| hypothetical protein Fjoh_3595 ... 149 1e-33
gi|257785017|ref|YP_003180234.1| hypothetical protein Apar_1215 ... 128 2e-27
gi|320013108|gb|ADW07956.1| hypothetical protein Sfla_6654 [Stre... 122 2e-25
gi|340344500|ref|ZP_08667632.1| hypothetical protein MY1_0599 [N... 110 6e-22
gi|242279749|ref|YP_002991878.1| hypothetical protein Desal_2283... 80.5 5e-13
gi|317064161|ref|ZP_07928646.1| predicted protein [Fusobacterium... 43.9 0.047
gi|197294396|ref|YP_001798937.1| hypothetical protein PAa_0309 [... 42.7 0.12
gi|333368608|ref|ZP_08460784.1| ATP-grasp domain protein [Psychr... 41.2 0.36
gi|253701671|ref|YP_003022860.1| signal transduction protein wit... 39.3 1.4
gi|225680077|gb|EEH18361.1| DNA-directed RNA polymerase [Paracoc... 37.4 4.4
gi|226291871|gb|EEH47299.1| DNA-directed RNA polymerase [Paracoc... 37.4 5.1
>gi|15610326|ref|NP_217706.1| hypothetical protein Rv3190c [Mycobacterium tuberculosis H37Rv]
gi|148663044|ref|YP_001284567.1| hypothetical protein MRA_3222 [Mycobacterium tuberculosis H37Ra]
gi|167966987|ref|ZP_02549264.1| hypothetical protein MtubH3_02588 [Mycobacterium tuberculosis
H37Ra]
10 more sequence titles
Length=421
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/421 (99%), Positives = 421/421 (100%), Gaps = 0/421 (0%)
Query 1 VEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
+EYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV
Sbjct 1 MEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
Query 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP
Sbjct 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
Query 121 PQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
PQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG
Sbjct 121 PQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
Query 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA
Sbjct 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
Query 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG
Sbjct 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
Query 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVI 360
KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVI
Sbjct 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVI 360
Query 361 DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI 420
DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI
Sbjct 361 DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI 420
Query 421 P 421
P
Sbjct 421 P 421
>gi|148824383|ref|YP_001289137.1| hypothetical protein TBFG_13210 [Mycobacterium tuberculosis F11]
gi|253800221|ref|YP_003033222.1| hypothetical protein TBMG_03230 [Mycobacterium tuberculosis KZN
1435]
gi|289555460|ref|ZP_06444670.1| hypothetical protein TBXG_03210 [Mycobacterium tuberculosis KZN
605]
30 more sequence titles
Length=421
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/421 (99%), Positives = 420/421 (99%), Gaps = 0/421 (0%)
Query 1 VEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
+EYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV
Sbjct 1 MEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
Query 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP
Sbjct 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
Query 121 PQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
PQVLRLQGHEIHLAIDN SNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG
Sbjct 121 PQVLRLQGHEIHLAIDNPSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
Query 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA
Sbjct 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
Query 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG
Sbjct 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
Query 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVI 360
KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVI
Sbjct 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVI 360
Query 361 DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI 420
DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI
Sbjct 361 DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI 420
Query 421 P 421
P
Sbjct 421 P 421
>gi|31794364|ref|NP_856857.1| hypothetical protein Mb3212c [Mycobacterium bovis AF2122/97]
gi|121639072|ref|YP_979296.1| hypothetical protein BCG_3212c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224991564|ref|YP_002646253.1| hypothetical protein JTY_3207 [Mycobacterium bovis BCG str. Tokyo
172]
8 more sequence titles
Length=421
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/421 (99%), Positives = 419/421 (99%), Gaps = 0/421 (0%)
Query 1 VEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
+EYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV
Sbjct 1 MEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
Query 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP
Sbjct 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
Query 121 PQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
PQVLRLQGHEIHLAIDN SNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG
Sbjct 121 PQVLRLQGHEIHLAIDNPSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
Query 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA
Sbjct 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
Query 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG
Sbjct 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
Query 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVI 360
KTDILIRVDDRNIFIGECKVWSGPRTMDD LKQLFGYLVWRDTKAAILLFIRNKDVTAVI
Sbjct 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDALKQLFGYLVWRDTKAAILLFIRNKDVTAVI 360
Query 361 DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI 420
DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI
Sbjct 361 DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI 420
Query 421 P 421
P
Sbjct 421 P 421
>gi|15842768|ref|NP_337805.1| hypothetical protein MT3278 [Mycobacterium tuberculosis CDC1551]
gi|254233799|ref|ZP_04927124.1| hypothetical protein TBCG_03122 [Mycobacterium tuberculosis C]
gi|254365811|ref|ZP_04981856.1| hypothetical protein TBHG_03118 [Mycobacterium tuberculosis str.
Haarlem]
gi|13883092|gb|AAK47619.1| hypothetical protein MT3278 [Mycobacterium tuberculosis CDC1551]
gi|124599328|gb|EAY58432.1| hypothetical protein TBCG_03122 [Mycobacterium tuberculosis C]
gi|134151324|gb|EBA43369.1| hypothetical protein TBHG_03118 [Mycobacterium tuberculosis str.
Haarlem]
gi|323718048|gb|EGB27230.1| hypothetical protein TMMG_02327 [Mycobacterium tuberculosis CDC1551A]
Length=421
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/421 (99%), Positives = 419/421 (99%), Gaps = 0/421 (0%)
Query 1 VEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
+EYVQLFSKGRLNDLAGSLAGFLGKA QATAQRLQSWDADDLLNTPVDDVVEQLVELGSV
Sbjct 1 MEYVQLFSKGRLNDLAGSLAGFLGKARQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
Query 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP
Sbjct 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
Query 121 PQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
PQVLRLQGHEIHLAIDN SNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG
Sbjct 121 PQVLRLQGHEIHLAIDNPSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
Query 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA
Sbjct 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
Query 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG
Sbjct 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
Query 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVI 360
KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVI
Sbjct 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVI 360
Query 361 DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI 420
DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI
Sbjct 361 DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI 420
Query 421 P 421
P
Sbjct 421 P 421
>gi|289755306|ref|ZP_06514684.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289695893|gb|EFD63322.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=421
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/421 (99%), Positives = 418/421 (99%), Gaps = 0/421 (0%)
Query 1 VEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
+EYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV
Sbjct 1 MEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
Query 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP
Sbjct 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
Query 121 PQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
PQVLRLQGHEIHLAIDN SND AAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG
Sbjct 121 PQVLRLQGHEIHLAIDNPSNDTAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
Query 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA
Sbjct 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
Query 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG
Sbjct 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
Query 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVI 360
KTDILIRVDDRNIFIGECKVWSGPRTMDD LKQLFGYLVWRDTKAAILLFIRNKDVTAVI
Sbjct 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDALKQLFGYLVWRDTKAAILLFIRNKDVTAVI 360
Query 361 DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI 420
DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI
Sbjct 361 DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI 420
Query 421 P 421
P
Sbjct 421 P 421
>gi|339633194|ref|YP_004724836.1| hypothetical protein MAF_31950 [Mycobacterium africanum GM041182]
gi|339332550|emb|CCC28265.1| hypothetical protein MAF_31950 [Mycobacterium africanum GM041182]
Length=421
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/421 (99%), Positives = 419/421 (99%), Gaps = 0/421 (0%)
Query 1 VEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
+EYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV
Sbjct 1 MEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
Query 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP
Sbjct 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
Query 121 PQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
PQVLRLQGHEIHLAIDN SNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG
Sbjct 121 PQVLRLQGHEIHLAIDNPSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
Query 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA
Sbjct 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
Query 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG
Sbjct 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
Query 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVI 360
KTDILIRVDDRNIFIGEC+VWSGPRTMDD LKQLFGYLVWRDTKAAILLFIRNKDVTAVI
Sbjct 301 KTDILIRVDDRNIFIGECEVWSGPRTMDDALKQLFGYLVWRDTKAAILLFIRNKDVTAVI 360
Query 361 DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI 420
DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI
Sbjct 361 DNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTTI 420
Query 421 P 421
P
Sbjct 421 P 421
>gi|289444755|ref|ZP_06434499.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T46]
gi|289571405|ref|ZP_06451632.1| LOW QUALITY PROTEIN: hypothetical protein TBJG_01936 [Mycobacterium
tuberculosis T17]
gi|289751871|ref|ZP_06511249.1| LOW QUALITY PROTEIN: hypothetical protein TBDG_02400 [Mycobacterium
tuberculosis T92]
gi|289417674|gb|EFD14914.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T46]
gi|289545159|gb|EFD48807.1| LOW QUALITY PROTEIN: hypothetical protein TBJG_01936 [Mycobacterium
tuberculosis T17]
gi|289692458|gb|EFD59887.1| LOW QUALITY PROTEIN: hypothetical protein TBDG_02400 [Mycobacterium
tuberculosis T92]
Length=393
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/393 (99%), Positives = 391/393 (99%), Gaps = 0/393 (0%)
Query 29 ATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFMLPATEVDQQYRDWGEQ 88
ATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFMLPATEVDQQYRDWGEQ
Sbjct 1 ATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFMLPATEVDQQYRDWGEQ 60
Query 89 RTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHEIHLAIDNLSNDAAAINAA 148
RTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHEIHLAIDN SNDAAAINAA
Sbjct 61 RTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHEIHLAIDNPSNDAAAINAA 120
Query 149 FHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQAEIGFPVRRRKD 208
FHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQAEIGFPVRRRKD
Sbjct 121 FHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQAEIGFPVRRRKD 180
Query 209 ADTYAAPISRKSVRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRNQRNALERTPSVAA 268
ADTYAAPISRKSVRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRNQRNALERTPSVAA
Sbjct 181 ADTYAAPISRKSVRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRNQRNALERTPSVAA 240
Query 269 KLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILIRVDDRNIFIGECKVWSGPRTMD 328
KLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILIRVDDRNIFIGECKVWSGPRTMD
Sbjct 241 KLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILIRVDDRNIFIGECKVWSGPRTMD 300
Query 329 DVLKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKIKEHPNHKRCPAHRAGADQYEF 388
D LKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKIKEHPNHKRCPAHRAGADQYEF
Sbjct 301 DALKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKIKEHPNHKRCPAHRAGADQYEF 360
Query 389 TMHADGDPEREIHLTLIPFALRPTAEVPTTTIP 421
TMHADGDPEREIHLTLIPFALRPTAEVPTTTIP
Sbjct 361 TMHADGDPEREIHLTLIPFALRPTAEVPTTTIP 393
>gi|298526663|ref|ZP_07014072.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496457|gb|EFI31751.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=348
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/348 (99%), Positives = 347/348 (99%), Gaps = 0/348 (0%)
Query 1 VEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
+EYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV
Sbjct 1 MEYVQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSV 60
Query 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP
Sbjct 61 ECPDLRVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMP 120
Query 121 PQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
PQVLRLQGHEIHLAIDN SNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG
Sbjct 121 PQVLRLQGHEIHLAIDNPSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
Query 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA
Sbjct 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPA 240
Query 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG
Sbjct 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAG 300
Query 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAIL 348
KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAIL
Sbjct 301 KTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAIL 348
>gi|326955321|gb|AEA29014.1| hypothetical protein Psed_6951 [Pseudonocardia dioxanivorans
CB1190]
Length=409
Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 195/420 (47%), Positives = 262/420 (63%), Gaps = 23/420 (5%)
Query 6 LFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDL 65
LFS G DL LA KA QA L ++ D LL DVV+ L+ LG++E L
Sbjct 6 LFSNG---DLGQHLAQARAKAEQA----LLDYNPDQLLLASETDVVDYLIGLGTIEELVL 58
Query 66 RVDDAFML--PATEVDQQYRDWGEQR-TRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQ 122
D+A+ L PA + W Q+ RRVTR +VVPF G +F+LR F PP
Sbjct 59 HRDEAYQLDSPAEITKWVHDRWDRQKHQRRVTRYTVVVPFSGDPKLFDLRASTFGLAPPY 118
Query 123 VLRLQGHEIHLAIDNLSNDAAA--INAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPG 180
+ EIHL D+ A I + +++ IE +G++ I HN+ L + +PG
Sbjct 119 AY-VGRQEIHLFWDSDYGHGTAEVIKSHIGEELTRIETSVGFTNNDIARHNKTLASAIPG 177
Query 181 MVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARA-AFKPEP 239
+V++RR + LA + +QA++GFP++ R+DA TY PI+RK V P RP R A+ PEP
Sbjct 178 LVSKRRAKHLADKQIQADLGFPLKTRRDAATYTVPITRKKVVPT--RPPQERGQAYTPEP 235
Query 240 AMQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGA 299
AM + +Y+ AL+VL N RNALER+PS+AAK EEIRD+LL+GLNAQFEG A GE+FNGA
Sbjct 236 AMGEAEYEQALKVLLNSRNALERSPSIAAKFTEEEIRDILLIGLNAQFEGAASGEVFNGA 295
Query 300 GKTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAV 359
GKTDILIR DDRNIFIGECK+W+GP+ + QL Y WRDTKAA+L+F+++ DVTA+
Sbjct 296 GKTDILIREDDRNIFIGECKIWNGPKKFAAAIDQLLSYTTWRDTKAALLIFVKSGDVTAI 355
Query 360 IDNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTAEVPTTT 419
A+ + EHPN KR H A D+++F +HA+GDP REI L L+ F +PT+T
Sbjct 356 TTKAVTAVTEHPNFKRKGTH-ASEDRHDFVLHANGDPNREIKLALMLFV------IPTST 408
>gi|146337913|ref|YP_001202961.1| hypothetical protein BRADO0801 [Bradyrhizobium sp. ORS 278]
gi|146190719|emb|CAL74724.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
Length=403
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 136/394 (35%), Positives = 203/394 (52%), Gaps = 5/394 (1%)
Query 18 SLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFMLPATE 77
SL ++ K + A + D +D+L P DD+ + + V+ P LR D + E
Sbjct 10 SLMDYVYKKGRDAANSVAGMDPEDILQKPADDLADIVEAHHRVDIPVLRRDQEILSEPRE 69
Query 78 VDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHEIHLAIDN 137
V QQ D+G + + L VPF+G F +P T+MPP L G + L +
Sbjct 70 VMQQVNDYGRNISVHAMEISLTVPFDGDGMFFQYQPSTSTSMPPIAQVLPGRRLILTVSG 129
Query 138 LSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQA 197
+ D + + F + ++ IE+YL W R Q HN+ LR + RR++LL R++ A
Sbjct 130 RTLDGPQVRSNFEQTLSEIERYLSWQREQAKPHNESLRENALREIEARRKRLLDARSMAA 189
Query 198 EIGFPVRRRKDADT-YAAP-ISRKSVRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRN 255
IG ++ T + AP I RKS P P+ R AF EP + ++DYQ L ++++
Sbjct 190 SIGLNMKPVLPVPTSHKAPQIQRKSA-PASLSPSN-RKAFVSEPELIEDDYQHILTIIKS 247
Query 256 QRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILIRVDDRNIFI 315
+ER+P LD E +R LV LN + G+ E FN AGKTDILIRV+DRN+FI
Sbjct 248 MAKVMERSPDAFVNLDEESLRQHFLVPLNGHYRGEGTAEAFNSAGKTDILIRVEDRNVFI 307
Query 316 GECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKIKEHPNHKR 375
ECK W G + D + QL GYL WRDTKA +++F R KD T ++ ++ HPN +
Sbjct 308 AECKFWGGTKVCHDAIDQLLGYLTWRDTKACLMMFSRLKDFTYMLGELWKSVESHPNFMK 367
Query 376 CPAHRAGADQYEFTMHADGDPEREIHLTLIPFAL 409
G + + + DP+R + LT + F +
Sbjct 368 -EDRNEGETRRRYIFRSKNDPDRSLVLTSLAFNI 400
>gi|86159964|ref|YP_466749.1| hypothetical protein Adeh_3546 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776475|gb|ABC83312.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
2CP-C]
Length=423
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/406 (37%), Positives = 220/406 (55%), Gaps = 17/406 (4%)
Query 17 GSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFM-LPA 75
GSL FL + + ++S+DA+ LL+ ++++ V ++ P LR DDA +
Sbjct 12 GSLREFLDQRLRELDAAVESFDANRLLSASIEELTGDFVSQYRLDVPRLRRDDAELEHQE 71
Query 76 TEVDQQ--------YRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQ 127
E+D + + D R + + R L VPF+G K +F +P +T + ++
Sbjct 72 AEIDPRLFRPNPNFFFDREAARIKGI-RYTLHVPFDGDKKLFEYQPSTYTMSGSPIASVR 130
Query 128 GHEIHLAIDNLSNDAA-AINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRR 186
+ L D L+ DA ++ F+ + +IE++LGW I L + + RRR
Sbjct 131 DGTLVLTSDRLATDAGDVVSNGFNTILNDIEQWLGWVGDDIRTWLASLDDAARTRIQRRR 190
Query 187 EQLLATRNLQAEIGFPVRRRKDAD-TYAAPISRKSVRPRPHR---PA-GARAAFKPEPAM 241
++LLA ++ A +GF +R R DA T+AAP R+ V P P R PA G+ A + PEP +
Sbjct 191 DKLLAAKSAVASMGFKLRERPDATRTFAAPEVRRKVAPVPARGGAPAPGSSAPYTPEPML 250
Query 242 QDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGK 301
D DY+ + V+ + +ER+P+ K++ E +R + LV LN +EG A GE FN GK
Sbjct 251 ADPDYEHIISVIGSMAAVIERSPAAFEKMEEEHLRFLFLVPLNGHYEGQATGETFNFDGK 310
Query 302 TDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVID 361
TDILIR RNIFI ECK W+GP+ + + QL GY WRDTK AILLF RNK +AV+D
Sbjct 311 TDILIRAQGRNIFIAECKFWTGPKGLTKTVDQLLGYTSWRDTKTAILLFNRNKGFSAVLD 370
Query 362 NAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPF 407
I+ HPN K A R Q+ F + D RE+ LT++ F
Sbjct 371 QIRPTIEAHPNCKAF-AGRPAETQFRFVLRQPTDASRELLLTVLAF 415
>gi|147678777|ref|YP_001212992.1| hypothetical protein PTH_2442 [Pelotomaculum thermopropionicum
SI]
gi|146274874|dbj|BAF60623.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length=415
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/404 (33%), Positives = 220/404 (55%), Gaps = 16/404 (3%)
Query 17 GSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFMLPAT 76
G L FL + ++ D++ +LN +D + LV S++ P + D ++
Sbjct 11 GDLRDFLEHKKLELKKEVERHDSNYILNVSEEDFYQYLVSKYSLKPPKIYEDKIYVYSQK 70
Query 77 EVDQQY-RD-----WGEQRTRRV--TRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQG 128
EVD RD + R V ++++ VPF+G ++F +P FT PP+ + G
Sbjct 71 EVDVDVSRDPMRVIFDRNRPFYVKGVQIIIAVPFKGDGELFQYKPSTFTFNPPRG-EVVG 129
Query 129 HEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQ 188
EIHL + + ++A + + ++++ I++YL W I+ N L + ++++R+++
Sbjct 130 EEIHLIYEMVEHNAERLKQGYQQELSEIKRYLEWVEGDINAFNGSLDQFVKQLISQRKKK 189
Query 189 LLATRNLQAEIGFPVRRRKDA-DTYAAPISRKSVRPRPHRPAGARAAFKPEPAMQDEDYQ 247
LL L + +G P++R +D +TY P R+ ++ P P ++ FKPEP + E+Y+
Sbjct 190 LLDDLGLVSSLGIPIKRCEDMPETYTIPSIREKLKFEP--PKVSKEPFKPEPVLALEEYE 247
Query 248 SALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILIR 307
+ L ++ N +ER+P +KL EEIRD L+ LNA +EG A GE FN GKTDILIR
Sbjct 248 NILEMISNMALVMERSPQTFSKLKEEEIRDHFLMMLNAHYEGQATGETFNYGGKTDILIR 307
Query 308 VDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKI 367
++ RN+FI ECK W G + + + + QL GY WRDTK AILLF RN+D + + +
Sbjct 308 INGRNVFIAECKFWRGEKKLVETIDQLLGYTSWRDTKTAILLFNRNQDFSLTLRRLDPTV 367
Query 368 KEHPNHKRCPAHRAGADQ----YEFTMHADGDPEREIHLTLIPF 407
K H +KR ++G + + + H D RE+ LT++ F
Sbjct 368 KSHNCYKREWRLKSGNLKSETIFSYVFHQPQDVNREVLLTIMAF 411
>gi|257093407|ref|YP_003167048.1| hypothetical protein CAP2UW1_1818 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045931|gb|ACV35119.1| conserved hypothetical protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length=409
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/385 (36%), Positives = 209/385 (55%), Gaps = 12/385 (3%)
Query 31 AQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFM-LPATEVD------QQYR 83
A+ + + + D LLN+ VDD+ + + +E P LR D+ T++D + +
Sbjct 25 AKEIDTINGDRLLNSSVDDLCDYFEKKYRIEVPILRPDNIVADQRETKIDVSGDRGRYFS 84
Query 84 DWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHEIHLAIDNLSNDAA 143
+ G+ T + + VPFEG + F ++P FT PP+ ++ + + + I+ A
Sbjct 85 NPGQPFYVNGTTVEISVPFEGDSEAFKIQPTSFTMSPPRA-EVKNNNLIIKIEGTDLSAE 143
Query 144 AINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQAEIGFPV 203
+ A ++ I+ IE YL R N +R+ G + +RR +LL RNL ++GF +
Sbjct 144 QVRAEVNRTISEIEGYLVTLRSNAQGLNSQVRSIARGAIEQRRTKLLKDRNLLGDLGFKI 203
Query 204 RRRK-DADTYAAPISRKSVRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRNQRNALER 262
+ R+ ++ T+AAP R+ + P P + FKPEP + DY L V++N + +ER
Sbjct 204 KEREGESRTFAAPEVRRKLAP--SLPPASATPFKPEPTLASADYDHILSVIQNMVHVMER 261
Query 263 TPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILIRVDDRNIFIGECKVWS 322
+PS +D E IR LV LN +EG A GE FN GKTDILIR D +NIFI ECK WS
Sbjct 262 SPSAFTSMDEESIRSHFLVQLNGHYEGQATGETFNYQGKTDILIRSDGKNIFIAECKFWS 321
Query 323 GPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKIKEHPNHKRCPAHRAG 382
GP+ + + + QL GY WRDTK A+++F RNKD T V+++ K H N KR A A
Sbjct 322 GPKKLLETIDQLLGYSSWRDTKVAVIVFNRNKDFTKVLESIRETSKGHSNFKRQIAF-AS 380
Query 383 ADQYEFTMHADGDPEREIHLTLIPF 407
+ + DP RE+ LT++ F
Sbjct 381 ETMFRYVFAHRDDPNRELLLTVMAF 405
>gi|218779142|ref|YP_002430460.1| hypothetical protein Dalk_1289 [Desulfatibacillum alkenivorans
AK-01]
gi|218760526|gb|ACL02992.1| conserved hypothetical protein [Desulfatibacillum alkenivorans
AK-01]
Length=411
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 131/389 (34%), Positives = 209/389 (54%), Gaps = 20/389 (5%)
Query 31 AQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFMLPATEVDQQYRDWGEQRT 90
A + D + LL+TPVDD+ + E V P LR + + A + + Q D R
Sbjct 25 ASEIAQMDGNRLLSTPVDDLCDYFEEKYRVNVPLLRETE---ITADQKETQI-DVSRDRL 80
Query 91 RRV-----------TRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHEIHLAIDNLS 139
R + T + + +PF+G ++F ++P FT PP + +Q + + + +
Sbjct 81 RAIRDRTRPFYIPGTTIEITIPFDGDAEVFKIQPTSFTLSPP-IADVQENRLLIKVQGTD 139
Query 140 NDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQAEI 199
A + + K I+ I+ YL + + N LR+ G + RRRE+LL+ +NL A +
Sbjct 140 LKADRVRSEIDKTISEIKSYLKKLKENANGLNDQLRSISNGAIQRRREKLLSDQNLVAAL 199
Query 200 GFPVRRRKDA-DTYAAPISRKSVRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRNQRN 258
GFP++ R D+ TY +P R+ VR + P + A F PEP + ++DY+ L V+ N
Sbjct 200 GFPLKERSDSPKTYVSPTVRRKVRAK--LPPASTAPFTPEPTLSNDDYEHILSVIENMAQ 257
Query 259 ALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILIRVDDRNIFIGEC 318
+ER+PS A +D E +R LV LN +EG A GE FN GKTDILIRV +N+FI EC
Sbjct 258 VMERSPSAFATIDEESLRSHFLVQLNGHYEGQATGETFNYEGKTDILIRVQGKNVFIAEC 317
Query 319 KVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKIKEHPNHKRCPA 378
K W GP+ + + + QL GY WRD K A+++F RN++++ V+D+ ++ H +KR
Sbjct 318 KYWGGPKKLTETIDQLLGYSSWRDMKVAVIIFSRNRNLSKVLDSIPQTVEVHRCYKRF-L 376
Query 379 HRAGADQYEFTMHADGDPEREIHLTLIPF 407
+ + + DP RE+ L+++ F
Sbjct 377 GKMSETNFRYVFSNRDDPNREMILSVLVF 405
>gi|291287377|ref|YP_003504193.1| hypothetical protein Dacet_1467 [Denitrovibrio acetiphilus DSM
12809]
gi|291287886|ref|YP_003504702.1| hypothetical protein Dacet_1983 [Denitrovibrio acetiphilus DSM
12809]
gi|290884537|gb|ADD68237.1| conserved hypothetical protein [Denitrovibrio acetiphilus DSM
12809]
gi|290885046|gb|ADD68746.1| conserved hypothetical protein [Denitrovibrio acetiphilus DSM
12809]
Length=411
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/414 (30%), Positives = 203/414 (50%), Gaps = 19/414 (4%)
Query 4 VQLFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECP 63
+Q+F++ L D +L + + ++ D LLN D ++ E +E
Sbjct 7 IQIFAEVELRD-------YLEQKKASIVDSIEKESDDYLLNVNEVDYIKYKTEEAKIEPL 59
Query 64 DLRVDDAF------MLPATEV-DQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQF 116
+ VD + M+PA + + GE+ + V R + PF G+ + +P
Sbjct 60 KIHVDQIYASSSEQMIPAEYFPNTFFVRQGEKYKKDVIRFHM--PFSGNSYLLKCKPST- 116
Query 117 TTMPPQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRN 176
+ + + G E I N SND A I +I +I K L + ID +N G+
Sbjct 117 RILWSTGIEISGQEFTFEIINFSNDVAKITIDKDSKIRDIMKQLVNVTKDIDQYNSGIET 176
Query 177 ELPGMVARRREQLLATRNLQAEIGFPVRRRKDA-DTYAAPISRKSVRPRPHRPAGARAAF 235
++ R++++L+ N+ A +G P+++ + T+A P + RP A +
Sbjct 177 QVKNAFDSRKKKILSKNNILASLGVPIKKATNVPQTFAVPTQGIRKKIPISRPQVHEAGY 236
Query 236 KPEPAMQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGEL 295
PEP++ Y S L+++ + ER PS+ + E +RD L+ L FEG A GE
Sbjct 237 TPEPSLDLTTYNSILKLIHDVGKEFERLPSLYCDKEEEHLRDHFLMMLEPNFEGSATGET 296
Query 296 FNGAGKTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKD 355
FN GKTDIL+R D +N+FI ECK W G + D + QL GYL WRD+KAA+++F++NKD
Sbjct 297 FNKKGKTDILLRHDGKNVFIAECKFWKGSKAFLDTISQLLGYLSWRDSKAAVIMFVQNKD 356
Query 356 VTAVIDNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFAL 409
T+V+++ + EHPN + T+H +GD R ++L ++ + L
Sbjct 357 FTSVLNSVKVAVTEHPNFIELKVMK-DETWLNCTVHLNGDRNRLVYLAVMLYHL 409
>gi|167621936|ref|YP_001676721.1| hypothetical protein Caul_5287 [Caulobacter sp. K31]
gi|167351677|gb|ABZ74407.1| conserved hypothetical protein [Caulobacter sp. K31]
Length=412
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 136/403 (34%), Positives = 204/403 (51%), Gaps = 16/403 (3%)
Query 18 SLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFMLPATE 77
+A F G+ S A + + D LLNT V+ +V+ V+L VE P + D +
Sbjct 16 GMAAFQGQVSVA-GEAVDKLAEDRLLNTDVEALVDYFVQLHHVEVPVILADQITVSEHER 74
Query 78 VDQQYRDWGEQR-TRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHEIHLAID 136
Q Y W E T T +PF G D+F L+P+ + T PPQ ++G IH +I
Sbjct 75 DIQVYSHWKETVITVPGTAFDFEIPFTGEADVFKLQPNTYDTAPPQG-EVRGQTIHFSIA 133
Query 137 NLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQ 196
I F + A IE+YLGW R + + + + +RR +LL ++L
Sbjct 134 GRDLKQDEIRQTFEQTRAAIERYLGWHRELWAGLDAQVAMAVRARIEQRRARLLTQKSLA 193
Query 197 A---EIGFPVRRRK-DADTYAAPISRKSVRPR--PHRPAGARAAFKPEPAMQDEDYQSAL 250
A ++G ++ + D TYAAP +K + P P RP+G P+P + +Q L
Sbjct 194 AGLADLGVKLKEKSGDPKTYAAPAVKKKIAPTLPPMRPSG-----PPDPTLDKGQFQDIL 248
Query 251 RVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILIRVDD 310
R++ ++E++ S L E +RDMLLV LNA F G A GE FN +GKTDILIR
Sbjct 249 RLISGAGRSIEQSSSRTRDLGEEALRDMLLVPLNAHF-GQATGEAFNYSGKTDILIRHQG 307
Query 311 RNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKIKEH 370
N+F+ ECK+W+G + + QL GYL WRDTKAA+++F R +AV+ A ++ H
Sbjct 308 GNLFVAECKIWNGDKHYLAAIDQLLGYLTWRDTKAALIVFNRQVGFSAVVAKVSALVRAH 367
Query 371 PNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRPTA 413
++ P +FT+ D +R + L ++ F L P A
Sbjct 368 ASYVSGPV-TLDETSAQFTLALPQDRDRHVTLAVLAFDLGPPA 409
>gi|296114713|ref|ZP_06833364.1| hypothetical protein GXY_03013 [Gluconacetobacter hansenii ATCC
23769]
gi|295978747|gb|EFG85474.1| hypothetical protein GXY_03013 [Gluconacetobacter hansenii ATCC
23769]
Length=417
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/317 (37%), Positives = 178/317 (57%), Gaps = 11/317 (3%)
Query 95 RLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIA 154
R L +PF G KD+F R F PP+ ++G I + A +NA F + +
Sbjct 93 RYTLEIPFTGDKDLFFCRGSTFNMNPPRGT-VKGTIIATTMVERQPTADQVNATFERFLK 151
Query 155 NIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQAEIGFPVRRRKD-ADTYA 213
+++++LGW R + N+ + + V RR + T + + + F +++R D A T+A
Sbjct 152 DLDEHLGWLRPAVVGWNESISAVVDSNVKARRARADQTGAVASGLKFALKQRNDRAATFA 211
Query 214 API-SRKSVRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRNQRNALERTPSVAAKLDG 272
AP+ SRK + P+ + AR PEPA+ D Y+ L L+ +ER+P A +D
Sbjct 212 APVASRKKIAPQLPQ---ARPVAPPEPALSDAIYRDILDTLQQMAEVMERSPHAYADMDE 268
Query 273 EEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILIRVDDRNIFIGECKVWSGPRTMDDVLK 332
E +R LV LNA+FEG+A GE+FN GKTDILI RNIFIGECK+W G + + + +
Sbjct 269 ETLRFQFLVPLNAKFEGEARGEVFNYGGKTDILITSQGRNIFIGECKIWKGEKALSEAID 328
Query 333 QLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKIKEHPNHKRCPAH--RAGADQYEFTM 390
Q+ GYL WRDTKAAILLF RN+ + V++ +++HP +C + + G ++ FT
Sbjct 329 QVLGYLSWRDTKAAILLFNRNRSFSNVLEKIRPTVEKHP---QCTSFDGKCGETEFAFTF 385
Query 391 HADGDPEREIHLTLIPF 407
D R++ LTL+ F
Sbjct 386 ARIDDASRKLKLTLLAF 402
>gi|256832727|ref|YP_003161454.1| hypothetical protein Jden_1502 [Jonesia denitrificans DSM 20603]
gi|256686258|gb|ACV09151.1| conserved hypothetical protein [Jonesia denitrificans DSM 20603]
Length=409
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 140/422 (34%), Positives = 214/422 (51%), Gaps = 38/422 (9%)
Query 6 LFSKGRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDL 65
LF++G L D FL K + + L++ D++L DD+V QLVE ++
Sbjct 4 LFARGELRD-------FLSKRLASVKRSLETMPEDEVLARSTDDLVSQLVESAAL----- 51
Query 66 RVDDAFMLPATEVDQQYRDWGEQRTRRVTRLVLVVP-------FE--GHKDIFNLRPDQ- 115
DA + A VD + +R + R P FE G ++ + P +
Sbjct 52 ---DALSVGADAVDGGVAEVTIERYDQFDRAYYKSPGFRIHAVFELTGDTELLHYAPSKR 108
Query 116 -FTTMPPQVLRLQGHEIHLAIDNLSN--DAAAINAAFHKQIANIEKYLGWSRRQIDLHNQ 172
T QV I + I+ + +A A A ++I I G S R + NQ
Sbjct 109 LLTRFDAQV---GNGTITVRIEQPGSAPNADAAKQAIDREIGKIRTMAGHSTRDVQAFNQ 165
Query 173 GLRNELPGMVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGAR 232
GL +L + R++ L R+L +GFP+++R DA P RK + + R
Sbjct 166 GLDRQLRPAIESRKKLLQDRRDLAGALGFPLKKRSDAPAQV-PFKRKGMGVQGTTRQSHR 224
Query 233 AAFKPEPAMQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAG 292
++ EPA+ + Y+ A+ V+ + ++ERTPSV A D EE+RD +LV LN F+G A
Sbjct 225 TPYRDEPALTEAQYEDAISVISSALLSMERTPSVVAGKDEEELRDYVLVMLNGTFQGAAT 284
Query 293 GELFNGAGKTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIR 352
GE F +GKTDIL+RV+DR++F+GECK W G + + + QL GY+ WRD KAA+++FI
Sbjct 285 GETFVKSGKTDILVRVEDRHVFVGECKWWKGSKALGAAIDQLLGYMPWRDEKAALIIFIN 344
Query 353 NKDVTAVIDNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDP---EREIHLTLIPFAL 409
NKD +AV D ++ H +KR + + +D + H G P EREI L ++ FA+
Sbjct 345 NKDASAVFDKVDTAVRRHAAYKRVGS--SSSDPTKRLNHILGHPDDLEREIQLAVL-FAV 401
Query 410 RP 411
P
Sbjct 402 LP 403
>gi|311742875|ref|ZP_07716683.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311313555|gb|EFQ83464.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length=405
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/404 (34%), Positives = 203/404 (51%), Gaps = 18/404 (4%)
Query 17 GSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLR---VDDAFML 73
G L FL + A R+ ++L+ D+++Q L +VE P + VD
Sbjct 8 GELRLFLQGLLEDAAGRIDKLPEHEVLSRSTGDLLDQFSRLATVEAPTITEGPVDGG--- 64
Query 74 PATEVDQQYRD-WGEQRTRRVTRLVLVVPFE--GHKDIFNLRPDQFTTMPPQVLRLQGHE 130
+E + RD WG RT V + F+ G +F RP+ M L
Sbjct 65 -VSETSSKVRDQWGRDRTYTVRGFTISATFDFTGDARLFYYRPNTHL-MKRFEASLGAGS 122
Query 131 IHLAIDNLSNDAA--AINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQ 188
I + ++D AA I I L R +D HN + L ++ RR++
Sbjct 123 ITVRSGQTASDIGPEKAKAAIDGAIGPIRTELEHVRADVDAHNSQVAERLRPVIDRRKKL 182
Query 189 LLATRNLQAEIGFPVRRRKDADTYAAPISRKSVRPRPHRPAGARAAFKPEPAMQDEDYQS 248
L RNL +GF + +R DA P+SRK V R + + EPA+ E Y+
Sbjct 183 LQERRNLAGALGFSIAKRPDA-PRPVPLSRKQVGA--ARTNRSMPPYADEPALTAEQYED 239
Query 249 ALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILIRV 308
+RV+++ A+ERTPSVA+ EE+RD +LV LN FEG A GE F +GKTDIL++
Sbjct 240 VIRVVQSTLLAMERTPSVASGKGEEELRDQILVQLNGTFEGGATGETFVQSGKTDILVQD 299
Query 309 DDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKIK 368
+R++F+GECK W+G + + QL GYL WRD KAA++LFI K+ +AV++ A ++
Sbjct 300 GERHVFVGECKWWTGAKECGKAIDQLLGYLPWRDEKAALILFIDRKNASAVLEKAEQSVR 359
Query 369 EHPNHKRC-PAHRAGADQYEFTMHADGDPEREIHLTLIPFALRP 411
EHP KR A A + + + DP+REI L ++ FA+ P
Sbjct 360 EHPAFKRVGTASTEPAARRNYILGHPDDPDREIRLAVL-FAVLP 402
>gi|284046631|ref|YP_003396971.1| hypothetical protein Cwoe_5188 [Conexibacter woesei DSM 14684]
gi|283950852|gb|ADB53596.1| conserved hypothetical protein [Conexibacter woesei DSM 14684]
Length=414
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/389 (36%), Positives = 197/389 (51%), Gaps = 39/389 (10%)
Query 6 LFSKGRLNDLAGSLAGFLGKASQATAQ-RLQSWDADDLLNTPVDDVVEQLVELGSVECPD 64
LF++ L D SL Q+ Q ++ D+LL VD V Q+ E +VE
Sbjct 2 LFTQADLADWLASL--------QSNCQAKISDASEDELLGADVDAWVAQVAEAFTVEPVV 53
Query 65 LRVDDAFM--LPATEVDQQYR------DWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQF 116
+R D+ + + ++VD +Y D + R V+ +PF G + + RP Q+
Sbjct 54 IRRDEVELEDVGESQVDVRYDQNRAIFDTTQPFLIPGRRAVIHIPFTGDETLLRCRPRQW 113
Query 117 TTMPPQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRN 176
+ PP+ + EI L + + I IA IE++ W + I+ HN+
Sbjct 114 SMSPPRAA-IGKDEIKLFFEWPHDHKPPIKTTTDALIAAIEQHASWQQPDIEAHNR---- 168
Query 177 ELPGM----VARRREQLLATRNLQAEIGFPVRRRKDAD-TYAAP-ISRKSVRPRPHRPAG 230
+LPG+ +A RR+++LA R +G PVRR DA T++AP I+R RP P P
Sbjct 169 DLPGLARHAIATRRQRVLADREHLDGLGIPVRRSTDAPRTFSAPGITR---RPSPTPPRQ 225
Query 231 ARAAFKP-EPAMQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEG 289
AA P EP + E Y L V+ +ERTP A D E++RD LLV LN +EG
Sbjct 226 RAAASTPLEPTLVGEFYAHILGVVSAMARGMERTPGNYASWDEEQLRDALLVLLNTHYEG 285
Query 290 DAGGELFNGAGKTDILIRVDDRNIFIGECKVWSGP-------RTMDDVLKQLFGYLVWRD 342
A GE FN +GKTDILIRV+DRN+F+ ECK WSGP R L QL GY WRD
Sbjct 286 QATGETFNKSGKTDILIRVEDRNVFVAECKWWSGPAAFALPDREESSALDQLLGYTTWRD 345
Query 343 TKAAILLFIRNKDVTAVIDNAIAKIKEHP 371
K A+++F+ KD+ V+ A + HP
Sbjct 346 AKLALVMFVDRKDMGRVLAAARETLANHP 374
>gi|295134630|ref|YP_003585306.1| hypothetical protein ZPR_2790 [Zunongwangia profunda SM-A87]
gi|294982645|gb|ADF53110.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
Length=415
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/406 (29%), Positives = 190/406 (47%), Gaps = 20/406 (4%)
Query 17 GSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFM---- 72
G L Q +Q D + +LN ++ E L++ +E P L +D ++
Sbjct 13 GDLGAVFQNIYQQILNGIQLKDDNYILNVSENEFAEYLIQNKKIEFPKLHFEDIYIDKYE 72
Query 73 --LPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIF---NLRPDQFTTMPPQVLRLQ 127
+PA + + ++ +R ++ +PF G DI+ N F+ + +
Sbjct 73 KEIPAEWFPGSFDVYSGKKYKRDV-IIYHIPFSG--DIYILANRAVSGFSISGSTTVGVD 129
Query 128 GHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRRE 187
I + I N ND I ++F Q I + ++ + N GL + + R+
Sbjct 130 KESITVEIVNFYNDPERIKSSFADQKRYILSDYDFVQKDCNSFNDGLLDFTVKHIQERKN 189
Query 188 QLLATRNLQAEIGFPVRRRKDADTYAA---PISRKSVRPRPHRPAGARAAFKPEPAMQDE 244
++L T +L A +G P++++KD T + P RK ++ P F PEP + +
Sbjct 190 KILQTNDLMASLGVPLKKKKDVSTTFSVPKPELRKKIKIEP---KVYEDKFNPEPTLSFK 246
Query 245 DYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFE-GDAGGELFNGAGKTD 303
DYQ LR++ + ER PS + E++RD +L+ L+ FE G A GE FN GKTD
Sbjct 247 DYQEILRIINDVGKNFERMPSTYSNKGEEDLRDHILLTLDPNFEYGSASGETFNKKGKTD 306
Query 304 ILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNA 363
IL++ +FI ECK W G QL YL +RD+K A++LF RNK+++ V
Sbjct 307 ILLKYKSDVVFIAECKFWGGKSQYFKTFDQLISYLTYRDSKTALVLFSRNKEISNVFSTI 366
Query 364 IAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFAL 409
+ K HPN R + A+ F H D D REI++ ++ + L
Sbjct 367 EKETKNHPNFVR-EERQTAANWRNFIFHLDEDSNREINIAVLTYHL 411
>gi|319427531|gb|ADV55605.1| conserved hypothetical protein [Shewanella putrefaciens 200]
Length=413
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/386 (29%), Positives = 181/386 (47%), Gaps = 12/386 (3%)
Query 32 QRLQSWDADDLLNTPVDDVVEQLVELGSV-------ECPDLRVDDAFMLPATEVDQQYRD 84
Q ++S D +LN + +E L+ S+ E + V++ +L + + +
Sbjct 30 QAIKSQTDDYILNVNKAEYIEYLLSEYSIQPLEIYREQLSVSVEERMILAERHPNSYWVE 89
Query 85 WGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHEIHLAIDNLSNDAAA 144
G + V L PF G + +R ++ P ++ + E+ I N + +A A
Sbjct 90 SGRSYPKDVYMFHL--PFTGDSQLLKVRASTYSMSSPLIM-VASQEVRFEIINFNKEAHA 146
Query 145 INAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQAEIGFPVR 204
I + +A + + + N L L R+ QLL ++ +G PVR
Sbjct 147 IKSEADNVVAQLISQNQYLTNDLTKFNGSLEALLSQAFDARKTQLLRKHDVIFALGIPVR 206
Query 205 RRKDA-DTYAAPISRKSVRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRNQRNALERT 263
+ T++ P R V +P +KPEP + D Y+ L+++ + ER
Sbjct 207 KATGTPSTFSVPAKRTPVIASKPKPEVTAKGYKPEPTLDDAIYRQILKIIHDVGKQFERL 266
Query 264 PSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILIRVDDRNIFIGECKVWSG 323
PS A D E +RD +L+ L FEG A GE FN GKTDIL+R ++ N+F+ E K W G
Sbjct 267 PSTYAGKDEEHLRDHMLLILEPNFEGSATGETFNKKGKTDILLRHENSNVFVAELKYWHG 326
Query 324 PRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKIKEHPNHKRCPAHRAGA 383
+ + + QL YL WRD+KAA+++F+ NK+++ V++ EHPNH
Sbjct 327 KKGYLETITQLLSYLTWRDSKAAVVMFVPNKELSTVLETIKNSTSEHPNHLGF-VKEIEE 385
Query 384 DQYEFTMHADGDPEREIHLTLIPFAL 409
Y+F H +GD RE+H+ + F L
Sbjct 386 GWYQFRFHINGDLNREVHVAVQAFHL 411
>gi|340619250|ref|YP_004737703.1| hypothetical protein zobellia_3286 [Zobellia galactanivorans]
gi|339734047|emb|CAZ97424.1| Conserved hypothetical protein [Zobellia galactanivorans]
Length=413
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/410 (28%), Positives = 198/410 (49%), Gaps = 28/410 (6%)
Query 17 GSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFM---- 72
G+L G +++ ++ +LN + E L++ ++ P L ++ F+
Sbjct 13 GNLKNLFGNSARQIESQINQKSESYILNVSEVEFAEFLIQSHIIDFPVLDFENVFVESYE 72
Query 73 --LPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIF---NLRPDQFTTMPPQVLRLQ 127
+PA Y D +T R +V +P+ G DI+ N F+ + +
Sbjct 73 KDIPAESFPGNY-DVYRGKTYRRDVIVYHIPYTG--DIYILGNQGVSSFSISGSIEVGVT 129
Query 128 GHEIHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNEL----PGMVA 183
I I N ++D I F ++Y+ + +G NE+ G +
Sbjct 130 EDSITTEIINFNSDPEKIKRDFEDS----KRYILSDYHILKKDCEGFNNEVLDFAIGKIK 185
Query 184 RRREQLLATRNLQAEIGFPVRRRKD-ADTYAAPIS--RKSVRPRPHRPAGARAAFKPEPA 240
R+++LL+ +L + +G P++++ A+T++ P RK ++ P FKPEP
Sbjct 186 ERKQKLLSKNDLLSSLGVPLKKKVGVAETFSIPKPELRKKIKIEPKV---YEKGFKPEPT 242
Query 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFE-GDAGGELFNGA 299
+ +E+YQ L+++ + ER PS E++RD +L+ L+ FE G A GE FN
Sbjct 243 LSNENYQEILKIINDVGKNFERMPSTYIGKGEEDLRDHILLILDPNFEFGSASGETFNKK 302
Query 300 GKTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAV 359
GKTDIL++ D +FI ECK W+G + QL GYL +R++K ++++F+RNKD++ V
Sbjct 303 GKTDILLKYDSDVVFIAECKFWAGKGVYLSTIDQLLGYLTFRNSKTSLVIFVRNKDMSNV 362
Query 360 IDNAIAKIKEHPNHKRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFAL 409
I + HPN+ R + G + + H + D REI+L ++ F L
Sbjct 363 ITTISEVTETHPNYIRT-EKKNGETWWNYIFHINDDRNREINLGVLAFHL 411
>gi|75906144|ref|YP_313527.1| hypothetical protein pSci3_03 [Spiroplasma citri]
gi|74095408|emb|CAI94241.1| hypothetical protein [Spiroplasma citri]
Length=411
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/358 (26%), Positives = 179/358 (50%), Gaps = 11/358 (3%)
Query 22 FLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFMLPATEVDQQ 81
F+ +++ + + +LN + ++ + +E +L +D+ + +
Sbjct 12 FIANKYSYLKNEIENLEDNYILNVDENTIINSFFDKYEIEPINLLIDEKYAKEDKKEKLG 71
Query 82 YRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHEIHLAIDNLSND 141
+G VT L + +P+ G+K++F L+P ++ + I ++ N+
Sbjct 72 KDFFGNSICYNVTILKVYIPYYGNKNLFYLQPSTIIFFSVEIF-INDDNIFFIVELDKNN 130
Query 142 AAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQAEIGF 201
+ + I +EK + + + +I ++N L+ ++ + R+E++L ++ + ++
Sbjct 131 IHNTKSKIEENIEYLEKNIEYIKNEITVYNNSLKFKIKENIKNRKEKILQSKKILEQLNI 190
Query 202 PVRRRKDADTYAAPIS-----RKSVRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRNQ 256
PV + D + P+S RK + RP +P F +P + ++ Y L + +
Sbjct 191 PVATKDDNENNTIPVSIIKSKRKKIVQRP-KPEIINN-FNLDPTISEDIYLEILETIISA 248
Query 257 RNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGD---AGGELFNGAGKTDILIRVDDRNI 313
+LE+ PS+ + E IRD +L L++ F+ D A E FN GKTDIL++ +RNI
Sbjct 249 GESLEKYPSLYSMKSEEAIRDFILSNLSSNFDNDNLSATSETFNRNGKTDILLKHKNRNI 308
Query 314 FIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKIKEHP 371
F+ ECK+W G + D + QL YL WRDTK A++LFI+ K+++A+I+ I +HP
Sbjct 309 FVAECKIWRGKKQFLDAINQLQSYLTWRDTKTALILFIKEKNISAIIEKINVIISKHP 366
>gi|20807548|ref|NP_622719.1| hypothetical protein TTE1077 [Thermoanaerobacter tengcongensis
MB4]
gi|20516082|gb|AAM24323.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length=411
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/405 (26%), Positives = 185/405 (46%), Gaps = 21/405 (5%)
Query 17 GSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAF----- 71
G L+ +L + +A + + + LLN + +E V +E L+ + A+
Sbjct 15 GDLSSYLQEIQEALRKSIFEESENYLLNVNEVEYIEYKVNEYKIEPLRLKYEQAYAEQKE 74
Query 72 -MLPATEVDQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHE 130
++PA + + + ++ + +P EG + P ++ + E
Sbjct 75 ELIPAELFPNDFFVYAGKSYPKMV-IYFHIPVEGELKLLTYTPSTRLLWTEEMF-IDKSE 132
Query 131 IHLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLL 190
+ + IN + + + +++ N LR ++ + R+++LL
Sbjct 133 LIFRRIQFRDSIEEINRDYESTVEKLRTMEAHINEEVNSFNNTLRTKVKEIFRSRKQELL 192
Query 191 ATRNLQAEIGFPVRRRKDA-DTYAAP---ISRKSVRPRPHRPAGARAAFKPEPAMQDEDY 246
RNL + + P++R ++ +T+ P + +K +P F PEPA+ + Y
Sbjct 193 KRRNLLSSLVVPIKRSENVPETFVIPPPGVKKKIAV----KPQVFDKGFTPEPALDMQTY 248
Query 247 QSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILI 306
+ L+++ ER PSV + E++RD L+ L FEG A GE FN GKTDIL+
Sbjct 249 RDILKLIHEMGKEFERKPSVYSGKSEEQLRDHFLMLLEPHFEGSATGETFNKNGKTDILL 308
Query 307 RVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAK 366
R + N+FI ECK W G + QL YL WRD+KAAI+LF++NK ++ V+
Sbjct 309 RYEGSNVFIAECKFWRGKAAYLKAISQLLSYLTWRDSKAAIILFVKNKTISDVLRTI--- 365
Query 367 IKEHPNHKRCPAHRAGADQ--YEFTMHADGDPEREIHLTLIPFAL 409
+E P HK D+ + + H +GD RE+ L ++ + L
Sbjct 366 EEETPKHKNYLGFVNKEDESWFNYRFHINGDRNREVKLAVMAYHL 410
>gi|159904815|ref|YP_001548477.1| hypothetical protein MmarC6_0427 [Methanococcus maripaludis C6]
gi|159886308|gb|ABX01245.1| conserved hypothetical protein [Methanococcus maripaludis C6]
Length=417
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/415 (25%), Positives = 193/415 (47%), Gaps = 25/415 (6%)
Query 10 GRLNDLAGSLAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDD 69
G ++L+ L G L + +++S + + +L+ + ++ L+ +E +L+ +D
Sbjct 8 GGPDNLSDKLEGRLTEL----KTKIKSENPEYILDIDENKYIQSLINKYHIEPLNLKFED 63
Query 70 AFM------LPATEVDQQYRDW-GEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQ 122
++ +PA + + G+ + V L+ +P+EG + RP+ T P
Sbjct 64 KYLDSEEREIPAEYFPANFFVYRGKTYPKPV--LIFCIPYEGDHKLLEYRPNPVTLYFPT 121
Query 123 VLRLQGHEI---HLAIDNLSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELP 179
V R + I ++ + I + F I K L + QI N+ L N
Sbjct 122 VYR-NNNAICLEYIQFETTEEYNNKIKSNFTSDWNVIFKNLNYLNNQIISFNKSLENTAK 180
Query 180 GMVARRREQLLATRNLQAEIGFPVRRRKDA-DTYAAPISRKSVRPRPHRPAGARAAFKPE 238
R+++++ +RN P++ +K++ DTY+ P+ + +P + + E
Sbjct 181 SFFENRKKEIIESRNSLNSFDMPIKTKKNSNDTYSVPVEKHIQKPEINIKTHEKTL---E 237
Query 239 PAMQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEG-DAGGELFN 297
P + DEDY + L+ + N N E+ P+ + E +RD ++ L + GE +N
Sbjct 238 PTLSDEDYSNILKTIHNIGNTFEKYPNNYYGKNEEGLRDFIVSHLETNYPSISITGESYN 297
Query 298 GAGKTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVT 357
+GK+DILI+ +N+F+ ECK W G + QL L WRD+K+A+++F++N +
Sbjct 298 KSGKSDILIKYQSKNLFVAECKFWGGGSEYTPAISQLLNNLTWRDSKSALIIFVKNMKIG 357
Query 358 AVIDNAIAKIKEHPNH-KRCPAHRAGADQYEFTMHADGDPEREIHLTLIPFALRP 411
V++ K HP+ + H Y F + +GD E +I L ++ F + P
Sbjct 358 PVLEEIKKCTKNHPDFLEDLGDHDQSWQNYIFKL--NGDDETKIKLAVLIFHVPP 410
>gi|146301337|ref|YP_001195928.1| hypothetical protein Fjoh_3595 [Flavobacterium johnsoniae UW101]
gi|146155755|gb|ABQ06609.1| hypothetical protein Fjoh_3595 [Flavobacterium johnsoniae UW101]
Length=402
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/396 (28%), Positives = 186/396 (47%), Gaps = 13/396 (3%)
Query 19 LAGFLGKASQATAQRLQSWDADDLLNTPVDDVVEQLVELGSVECPDLRVDDAFMLPATEV 78
L F+G+ +R+ + D +T + ++ E+L ++ P + + P
Sbjct 10 LGHFIGEYRNNLFERIDKLEITD--STNISELAERLKSEFTI-FPIIIGEPKPSQPIETT 66
Query 79 DQQYRDWGEQRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGH-EIHLAIDN 137
+ Y WG+ + V + + +PFEG+ +F P + T + + + G+ I I
Sbjct 67 KKMYNPWGQLYNQNVLEITVTIPFEGNHKLFYCMPSRSTIVYLEDNVVIGNTNIKATITL 126
Query 138 LSNDAAAINAAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQA 197
D A + ++ I+ + L +I N L N + + R+ + +
Sbjct 127 TQFDEKAYFSEVNEIISTVSTNLPAIHDEIKPWNDRLENLIQQALESRKGIVSKKFDFME 186
Query 198 EIGFPVRRRKDADTYAAP--ISRKSVRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRN 255
+IG V ++ Y P I++K++ P P A + P +Q+E Y VL N
Sbjct 187 KIGLKVN--PNSTEYLVPPTITKKAI-PTPVTETSKTVAKEKVPILQEEVYIDIREVLYN 243
Query 256 QRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAG-GELFNGAGKTDILIRV--DDRN 312
A+ER PS+ E++RD+ L+ L ++E G GE FN GKTDIL++ D N
Sbjct 244 VGKAIERKPSLYKDKYEEDLRDIFLLFLETRYEAATGVGEAFNKKGKTDILLKYAKDGTN 303
Query 313 IFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRNKDVTAVIDNAIAKIKEHPN 372
+F+ ECK W G + + + + QL GYL RDTK A++ F+ K++T+V+ ++I H N
Sbjct 304 LFVAECKYWKGQKKLTEGIDQLLGYLTHRDTKTALIFFVDQKEITSVVSTIKSEISCHKN 363
Query 373 HKR-CPAHRAGADQYEFTMHADGDPEREIHLTLIPF 407
+ R + YEFT+ D D + ++ L L F
Sbjct 364 YSRHIKNTYEHSINYEFTLPDDSDKKIQVELMLFHF 399
>gi|257785017|ref|YP_003180234.1| hypothetical protein Apar_1215 [Atopobium parvulum DSM 20469]
gi|257473524|gb|ACV51643.1| hypothetical protein Apar_1215 [Atopobium parvulum DSM 20469]
Length=415
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/279 (27%), Positives = 136/279 (49%), Gaps = 15/279 (5%)
Query 95 RLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHEIHLAIDNLSNDAAAINAA------ 148
R+ PF G +F++R F+ Q + L G+ + + ++ A + +
Sbjct 100 RISFHFPFTGDPQLFHMRASTFSLGGYQEIELAGNTLIIRLEYQIYTNAELPSGDQILKD 159
Query 149 FHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQAEIGFPVRRRKD 208
++ +I+ + + ++ N L + + +R + L+ ++ P+ + K
Sbjct 160 LEERKKDIDGGVTYVNNDVNEFNSELATLIEAELGKREDLARKFEGLERDLEIPLTKAKA 219
Query 209 ADTYAAPISRKSVRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRNQRNALERTPSVAA 268
A + P+ ++ + + + + D +YQ L +++N + ERTP +
Sbjct 220 ASS-LVPLKKRKILE-----LSTTSTRENNWCISDGEYQEILGMIKNFYSTCERTPETYS 273
Query 269 KLDGEEIRDMLLVGLNAQFEGDAGGELFNGAGKTDILIRVDDRNIFIGECKVWSGPRTMD 328
L+ E +RD+ L LN+ +EG AGGE F GKTDI I D+R F+ ECK+W+G +
Sbjct 274 SLNEEALRDLSLASLNSVYEGKAGGETFRHKGKTDISIEADNRAAFVAECKIWNGKKKFT 333
Query 329 DVLKQLFGYLVWRDTKAAILLFIRNK---DVTAVIDNAI 364
D + QL GYL WRD K A+++F R + DV A + NA+
Sbjct 334 DAIAQLLGYLTWRDVKTALIVFSRKRRFDDVLAHVSNAL 372
>gi|320013108|gb|ADW07956.1| hypothetical protein Sfla_6654 [Streptomyces flavogriseus ATCC
33331]
Length=307
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/181 (39%), Positives = 95/181 (53%), Gaps = 12/181 (6%)
Query 236 KPEPAMQDED-YQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQFEGDAGGE 294
+P+ M D Y AL +LR+ RN +ER PS EIRD+LLV L A F G E
Sbjct 131 RPDHEMADAQLYAEALSLLRHARNQMERLPSTTRGKSEPEIRDVLLVALGAAFAGRCTAE 190
Query 295 LFNGAGKTDILIRVDDRNIFIGECKVWSGPRTM-DDVLKQLFGYLVWRDTKAAILLFIRN 353
NG GKTD+L+R+ DRN+ +GECK+W G ++ + QL GYL D A I LFIR
Sbjct 191 SLNGKGKTDLLLRIGDRNVLVGECKIWGGSTDFREEDIPQLLGYLTRYDRHAVIPLFIRK 250
Query 354 KDVTAVIDNAIAKIKEHPNHKRC-----PAHRAGADQYEFTMHADGDPEREIHLTLIPFA 408
++ A+ ++ EHP RC P H QY F + ++ + LIPF
Sbjct 251 ARPEEIVAKAVKELAEHP---RCVSAAVPDHE--GRQYTFVFRSLSATPWDVEVALIPFV 305
Query 409 L 409
+
Sbjct 306 I 306
>gi|340344500|ref|ZP_08667632.1| hypothetical protein MY1_0599 [Nitrosopumilus sp. MY1]
gi|339519641|gb|EGP93364.1| hypothetical protein MY1_0599 [Nitrosopumilus sp. MY1]
Length=394
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/154 (38%), Positives = 83/154 (54%), Gaps = 9/154 (5%)
Query 221 VRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLL 280
V+P P + K +P +Q + +S L ++ NQ E TP V + L E +RD++L
Sbjct 211 VKPEPKQ--------KTDPILQRKSVESVLELIGNQGRQFETTPKVFSGLGEEALRDIIL 262
Query 281 VGLNAQFEGDAGGELFNGAGKTDILIRVD-DRNIFIGECKVWSGPRTMDDVLKQLFGYLV 339
LNA F+G A GE F GKTDI ++++ D I ECK W G + D+ + Q FGYL
Sbjct 263 SMLNAVFDGSATGETFVKNGKTDIHLQMNIDGGILTAECKFWGGEKLYDETIDQHFGYLK 322
Query 340 WRDTKAAILLFIRNKDVTAVIDNAIAKIKEHPNH 373
WR A + F +N+ + VI AI K HP +
Sbjct 323 WRQNYAIQITFSKNQGFSEVIGKAIESAKSHPTY 356
>gi|242279749|ref|YP_002991878.1| hypothetical protein Desal_2283 [Desulfovibrio salexigens DSM
2638]
gi|242122643|gb|ACS80339.1| hypothetical protein Desal_2283 [Desulfovibrio salexigens DSM
2638]
Length=422
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/324 (23%), Positives = 128/324 (40%), Gaps = 19/324 (5%)
Query 100 VPFEGHKDIFNLRPD-QFTTMPPQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQIANIEK 158
+P+ G K + +P + P I + L +D A F + + I+K
Sbjct 104 IPYSGDKRLLVSKPSIHYKNGGPSFTIKNDRIIKHYVRPLYSDPKAFKHHFMRNLEKIKK 163
Query 159 YLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQAEIGFPVRRRKDADTYAAPISR 218
YL W I L LR + +A RR + + I + + A + PI
Sbjct 164 YLEWQANDISLFEIKLRKIVNTGIAHRRMR-------GSTIALHLDSKHGATEFN-PIHV 215
Query 219 KSVRPRPHRPAGARAAFKPEPAMQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDM 278
+S P + P + DED+ +RVLR+ + ERTP++ + +++R++
Sbjct 216 RSKLPLD------ELDYSGIPVISDEDFIKTIRVLRHTGKSFERTPAIYNVHNDQDLRNI 269
Query 279 LLVGLNAQFEGDAGGELFNGAGKTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYL 338
L+ LN F G ++F+ G+ + ++ IG C W + L L
Sbjct 270 LVSNLNTHFSGQNNEDIFSRIGENGFTVAFAKKSALIGRCSTWRCAEGLIHTLNALLQKD 329
Query 339 VWRDTKAAILLFIRNKDVTAVIDNAIAKIK-EHPNHKRCPAHRAGADQYEFTMHADGDPE 397
+ K A+ +F R ++ + +I K+ EHP + A +++ M D +
Sbjct 330 LCPGCKIAMTIFNRTEENFNSLLKSIRKLLIEHPCLIKIEKEYA-ENEWHTIMGKKSDLQ 388
Query 398 RE--IHLTLIPFALRPTAEVPTTT 419
IHL + T +P T
Sbjct 389 NNHWIHLMIFNLYFSKTVHLPHLT 412
>gi|317064161|ref|ZP_07928646.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
gi|313689837|gb|EFS26672.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
Length=190
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/119 (23%), Positives = 60/119 (51%), Gaps = 2/119 (1%)
Query 88 QRTRRVTRLVLVVPFEGHKDIFNLRPDQFTTMPPQVLRLQGHEIHLAIDNL-SNDAAAIN 146
+R + +++ VP++G+ ++ LRPD T P+V L+ EI + + +L S I+
Sbjct 73 KREKSDKDIIIYVPYDGNVEMLRLRPDIETKETPKVF-LKEKEIEVKVKDLASKTKEEIS 131
Query 147 AAFHKQIANIEKYLGWSRRQIDLHNQGLRNELPGMVARRREQLLATRNLQAEIGFPVRR 205
K + ++K L + ++ I+ N+ L+ L G + + ++ + EI +++
Sbjct 132 EETEKIVEELKKNLDYLKKDIEECNKELKKGLKGEAEKIKNRIEKDKEKLKEIKEIIKK 190
>gi|197294396|ref|YP_001798937.1| hypothetical protein PAa_0309 [Candidatus Phytoplasma australiense]
gi|171853723|emb|CAM11644.1| hypothetical protein PA0309 [Candidatus Phytoplasma australiense]
Length=151
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/62 (33%), Positives = 36/62 (59%), Gaps = 0/62 (0%)
Query 294 ELFNGAGKTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWRDTKAAILLFIRN 353
E NG GK+DI+I +D+ I ECK G +++ ++ KQ+ + D ++++F N
Sbjct 23 EAINGHGKSDIMIEFEDKLRHIIECKRQRGEKSIKEIYKQINRHTTSEDKTISLIMFCEN 82
Query 354 KD 355
K+
Sbjct 83 KN 84
>gi|333368608|ref|ZP_08460784.1| ATP-grasp domain protein [Psychrobacter sp. 1501(2011)]
gi|332976740|gb|EGK13572.1| ATP-grasp domain protein [Psychrobacter sp. 1501(2011)]
Length=404
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/170 (25%), Positives = 70/170 (42%), Gaps = 33/170 (19%)
Query 183 ARRREQLLATRNLQAEIGFPVRRRKDADTYAAP----ISRKSVRPRPHRPAGARAAFKPE 238
+ +R+ L + +NL+ ++ + D D + P + +SV R + +PE
Sbjct 19 SSQRDMLESLQNLRKKVALNLDIYSDLDVVSNPAQDGLVEESVLDAAFRILASHRFHRPE 78
Query 239 P-AMQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEI---------------RDMLLVG 282
M D+ + + A PS+ A DG +I +LL G
Sbjct 79 ILEMADKSFTEP----HITKGATSAQPSLVADTDGTQIMPRWQFVLEQAIEHQTKVLLTG 134
Query 283 LNA--------QFEGDAGGELFNGAGKTDILIRVDDRNIFIGECKVWSGP 324
N+ QFE AG L G+ TD+L ++DD+ FI C+V + P
Sbjct 135 RNSIDYELHRTQFE-QAGIRLLTGSTSTDMLNKIDDKFAFIKHCEVSNIP 183
>gi|253701671|ref|YP_003022860.1| signal transduction protein with Nacht domain [Geobacter sp.
M21]
gi|251776521|gb|ACT19102.1| putative signal transduction protein with Nacht domain [Geobacter
sp. M21]
Length=851
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/172 (25%), Positives = 66/172 (39%), Gaps = 34/172 (19%)
Query 241 MQDEDYQSALRVLRNQRNALERTPSVAAKLDGEEIRDMLLVGLNAQF------------- 287
+ E + +AL+ + L +AKLDG D + G N +
Sbjct 640 LSSERHPAALKGANFNSSTLYGIKFSSAKLDGANFTDCTIEGCNFSYADLNNATFSRSLL 699
Query 288 -EGDAGGEL-----FNGAGKTDILIRVDDRNIFIGECKVWSGPRTMDDVLKQLFGYLVWR 341
+ D G F G TDI + +D++ G KV G K GYL +R
Sbjct 700 IDCDITGASLDNADFTGVHHTDITVVIDEK----GARKVLDG--------KNAIGYLRYR 747
Query 342 DTKA---AILLFIRNKDVTAVIDNAIAKIKEHPNHKRCPAHRAGADQYEFTM 390
K L ++N V+D + K+ EHP +R + GA + + T+
Sbjct 748 GAKTDQVENLYVLKNHQDFPVVDKILVKLAEHPIRQRIGLEQRGAARQDVTL 799
>gi|225680077|gb|EEH18361.1| DNA-directed RNA polymerase [Paracoccidioides brasiliensis Pb03]
Length=1319
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/113 (29%), Positives = 58/113 (52%), Gaps = 9/113 (7%)
Query 111 LRPDQFTTMPPQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQ----IANIEKYLGWSRRQ 166
+R D + PP V R +G L+ + L+N +++AA K+ I + K +G+ +
Sbjct 8 IRKDFLFSQPPSVRRSKGIGGELS-EMLANIDVSLSAAMFKRSEILIHRVAKIIGYGTPE 66
Query 167 I-DLHNQGLRNELPGMVARRREQLL--ATRNLQAEIGFPVRRRKDADTYAAPI 216
+ DLHN+ LR+ + M+ RR ++ A + + ++ + DA TYA I
Sbjct 67 VLDLHNKYLRSMISHMIVHRRYGMVWWAQKWFEVDMKY-AYAEPDAATYALMI 118
>gi|226291871|gb|EEH47299.1| DNA-directed RNA polymerase [Paracoccidioides brasiliensis Pb18]
Length=1408
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/113 (29%), Positives = 58/113 (52%), Gaps = 9/113 (7%)
Query 111 LRPDQFTTMPPQVLRLQGHEIHLAIDNLSNDAAAINAAFHKQ----IANIEKYLGWSRRQ 166
+R D + PP V R +G L+ + L+N +++AA K+ I + K +G+ +
Sbjct 121 IRKDFLFSQPPSVRRSKGIGGELS-EMLANIDVSLSAAMFKRSEILIHRVAKIIGYGTPE 179
Query 167 I-DLHNQGLRNELPGMVARRREQLL--ATRNLQAEIGFPVRRRKDADTYAAPI 216
+ DLHN+ LR+ + M+ RR ++ A + + ++ + DA TYA I
Sbjct 180 VLDLHNKYLRSMISHMIVHRRYGMVWWAQKWFEVDMKY-AYAEPDAATYALMI 231
Lambda K H
0.320 0.137 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 852977278728
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40