BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3192
Length=153
Score E
Sequences producing significant alignments: (Bits) Value
gi|15842773|ref|NP_337810.1| hypothetical protein MT3283 [Mycoba... 310 7e-83
gi|15610328|ref|NP_217708.1| hypothetical protein Rv3192 [Mycoba... 308 1e-82
gi|308370180|ref|ZP_07420571.2| conserved alanine and proline ri... 306 6e-82
gi|298526665|ref|ZP_07014074.1| conserved hypothetical protein [... 306 6e-82
gi|308232367|ref|ZP_07415848.2| conserved alanine and proline ri... 300 6e-80
gi|254233801|ref|ZP_04927126.1| conserved hypothetical alanine a... 234 2e-60
gi|183981395|ref|YP_001849686.1| hypothetical protein MMAR_1372 ... 198 3e-49
gi|342857385|ref|ZP_08714041.1| hypothetical protein MCOL_00865 ... 196 9e-49
gi|118617986|ref|YP_906318.1| hypothetical protein MUL_2504 [Myc... 196 1e-48
gi|118464579|ref|YP_881330.1| hypothetical protein MAV_2121 [Myc... 194 5e-48
gi|336461752|gb|EGO40612.1| putative oxidoreductase, MSMEG_2256 ... 193 6e-48
gi|254774833|ref|ZP_05216349.1| hypothetical protein MaviaA2_092... 193 7e-48
gi|41408165|ref|NP_961001.1| hypothetical protein MAP2067c [Myco... 191 3e-47
gi|296166294|ref|ZP_06848732.1| luciferase family protein [Mycob... 189 1e-46
gi|254818736|ref|ZP_05223737.1| hypothetical protein MintA_02369... 188 2e-46
gi|240171859|ref|ZP_04750518.1| hypothetical protein MkanA1_2126... 185 2e-45
gi|333990673|ref|YP_004523287.1| hypothetical protein JDM601_203... 182 1e-44
gi|108797837|ref|YP_638034.1| hypothetical protein Mmcs_0862 [My... 174 5e-42
gi|126433477|ref|YP_001069168.1| hypothetical protein Mjls_0868 ... 173 6e-42
gi|120402180|ref|YP_952009.1| luciferase family protein [Mycobac... 170 5e-41
gi|145225738|ref|YP_001136416.1| luciferase family protein [Myco... 157 4e-37
gi|315446090|ref|YP_004078969.1| flavin-dependent oxidoreductase... 156 8e-37
gi|254483361|ref|ZP_05096591.1| hypothetical protein GPB2148_255... 93.2 1e-17
gi|108803783|ref|YP_643720.1| luciferase-like protein [Rubrobact... 92.4 2e-17
gi|269128352|ref|YP_003301722.1| hypothetical protein Tcur_4157 ... 87.4 6e-16
gi|156743881|ref|YP_001434010.1| luciferase family protein [Rose... 85.9 2e-15
gi|269836561|ref|YP_003318789.1| Luciferase-like monooxygenase [... 85.9 2e-15
gi|148655273|ref|YP_001275478.1| luciferase family protein [Rose... 84.0 7e-15
gi|297182521|gb|ADI18682.1| coenzyme f420-dependent n5,n10-methy... 82.8 2e-14
gi|229488867|ref|ZP_04382733.1| f420-dependent oxidoreductase fa... 81.6 4e-14
gi|183982982|ref|YP_001851273.1| hypothetical protein MMAR_2980 ... 80.9 6e-14
gi|219849970|ref|YP_002464403.1| luciferase family protein [Chlo... 79.7 1e-13
gi|209884142|ref|YP_002287999.1| hypothetical protein OCAR_4999 ... 78.2 4e-13
gi|226308594|ref|YP_002768554.1| oxidoreductase [Rhodococcus ery... 77.8 5e-13
gi|312198013|ref|YP_004018074.1| F420-dependent oxidoreductase [... 77.0 8e-13
gi|163846028|ref|YP_001634072.1| luciferase family protein [Chlo... 76.6 1e-12
gi|108798527|ref|YP_638724.1| hypothetical protein Mmcs_1557 [My... 75.9 2e-12
gi|256374455|ref|YP_003098115.1| luciferase-like monooxygenase [... 74.7 4e-12
gi|312198080|ref|YP_004018141.1| F420-dependent oxidoreductase [... 74.3 6e-12
gi|297181701|gb|ADI17883.1| coenzyme f420-dependent n5,n10-methy... 74.3 6e-12
gi|309792140|ref|ZP_07686612.1| luciferase family protein [Oscil... 73.9 7e-12
gi|120402818|ref|YP_952647.1| hypothetical protein Mvan_1819 [My... 73.9 7e-12
gi|126434125|ref|YP_001069816.1| hypothetical protein Mjls_1527 ... 73.2 1e-11
gi|312195894|ref|YP_004015955.1| F420-dependent oxidoreductase [... 73.2 1e-11
gi|288917555|ref|ZP_06411920.1| Luciferase-like monooxygenase [F... 72.8 2e-11
gi|145225079|ref|YP_001135757.1| hypothetical protein Mflv_4500 ... 72.8 2e-11
gi|119474731|ref|ZP_01615084.1| PROBABLE OXIDOREDUCTASE [marine ... 72.4 2e-11
gi|118469756|ref|YP_886399.1| hypothetical protein MSMEG_2037 [M... 72.0 3e-11
gi|325673540|ref|ZP_08153231.1| putative oxidoreductase [Rhodoco... 71.6 3e-11
gi|254481806|ref|ZP_05095049.1| hypothetical protein GPB2148_149... 71.6 3e-11
>gi|15842773|ref|NP_337810.1| hypothetical protein MT3283 [Mycobacterium tuberculosis CDC1551]
gi|167966635|ref|ZP_02548912.1| hypothetical protein MtubH3_00601 [Mycobacterium tuberculosis
H37Ra]
gi|253800225|ref|YP_003033226.1| hypothetical protein TBMG_03232 [Mycobacterium tuberculosis KZN
1435]
gi|254552284|ref|ZP_05142731.1| hypothetical protein Mtube_17838 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|308371262|ref|ZP_07424378.2| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu003]
gi|13883098|gb|AAK47624.1| hypothetical protein MT3283 [Mycobacterium tuberculosis CDC1551]
gi|253321728|gb|ACT26331.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis
KZN 1435]
gi|308329209|gb|EFP18060.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu003]
Length=154
Score = 310 bits (793), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 153/153 (100%), Positives = 153/153 (100%), Gaps = 0/153 (0%)
Query 1 MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV 60
MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV
Sbjct 2 MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV 61
Query 61 PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT 120
PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT
Sbjct 62 PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT 121
Query 121 PDHHGEFDNPDFITAQWSPARIDPPGPSPAGPR 153
PDHHGEFDNPDFITAQWSPARIDPPGPSPAGPR
Sbjct 122 PDHHGEFDNPDFITAQWSPARIDPPGPSPAGPR 154
>gi|15610328|ref|NP_217708.1| hypothetical protein Rv3192 [Mycobacterium tuberculosis H37Rv]
gi|31794366|ref|NP_856859.1| hypothetical protein Mb3214 [Mycobacterium bovis AF2122/97]
gi|121639074|ref|YP_979298.1| hypothetical protein BCG_3214 [Mycobacterium bovis BCG str. Pasteur
1173P2]
52 more sequence titles
Length=153
Score = 308 bits (790), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/153 (100%), Positives = 153/153 (100%), Gaps = 0/153 (0%)
Query 1 MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV 60
MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV
Sbjct 1 MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV 60
Query 61 PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT 120
PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT
Sbjct 61 PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT 120
Query 121 PDHHGEFDNPDFITAQWSPARIDPPGPSPAGPR 153
PDHHGEFDNPDFITAQWSPARIDPPGPSPAGPR
Sbjct 121 PDHHGEFDNPDFITAQWSPARIDPPGPSPAGPR 153
>gi|308370180|ref|ZP_07420571.2| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu002]
gi|308372452|ref|ZP_07428744.2| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu004]
gi|308373664|ref|ZP_07433246.2| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu005]
gi|308324990|gb|EFP13841.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu002]
gi|308333041|gb|EFP21892.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu004]
gi|308336727|gb|EFP25578.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu005]
Length=154
Score = 306 bits (785), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 152/153 (99%), Positives = 152/153 (99%), Gaps = 0/153 (0%)
Query 1 MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV 60
MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV
Sbjct 2 MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV 61
Query 61 PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT 120
PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT
Sbjct 62 PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT 121
Query 121 PDHHGEFDNPDFITAQWSPARIDPPGPSPAGPR 153
PDHHGEFDNPDFITAQWSPARIDPPGPSPAG R
Sbjct 122 PDHHGEFDNPDFITAQWSPARIDPPGPSPAGLR 154
>gi|298526665|ref|ZP_07014074.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496459|gb|EFI31753.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=154
Score = 306 bits (785), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 152/153 (99%), Positives = 152/153 (99%), Gaps = 0/153 (0%)
Query 1 MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV 60
MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAP LELSTGIALAFPRGPFV
Sbjct 2 MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPCLELSTGIALAFPRGPFV 61
Query 61 PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT 120
PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT
Sbjct 62 PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT 121
Query 121 PDHHGEFDNPDFITAQWSPARIDPPGPSPAGPR 153
PDHHGEFDNPDFITAQWSPARIDPPGPSPAGPR
Sbjct 122 PDHHGEFDNPDFITAQWSPARIDPPGPSPAGPR 154
>gi|308232367|ref|ZP_07415848.2| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu001]
gi|308378219|ref|ZP_07481940.2| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu009]
gi|308379438|ref|ZP_07486290.2| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu010]
gi|308406077|ref|ZP_07495054.2| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu012]
gi|308214059|gb|EFO73458.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu001]
gi|308353132|gb|EFP41983.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu009]
gi|308356874|gb|EFP45725.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu010]
gi|308364561|gb|EFP53412.1| conserved alanine and proline rich protein [Mycobacterium tuberculosis
SUMu012]
Length=209
Score = 300 bits (767), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 148/151 (99%), Positives = 149/151 (99%), Gaps = 0/151 (0%)
Query 1 MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV 60
MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV
Sbjct 1 MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV 60
Query 61 PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT 120
PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT
Sbjct 61 PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQTGT 120
Query 121 PDHHGEFDNPDFITAQWSPARIDPPGPSPAG 151
PDHHGEFDNPDFITAQWSPARIDPP P+P G
Sbjct 121 PDHHGEFDNPDFITAQWSPARIDPPVPAPLG 151
>gi|254233801|ref|ZP_04927126.1| conserved hypothetical alanine and proline-rich protein [Mycobacterium
tuberculosis C]
gi|124599330|gb|EAY58434.1| conserved hypothetical alanine and proline-rich protein [Mycobacterium
tuberculosis C]
Length=142
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/124 (97%), Positives = 121/124 (98%), Gaps = 3/124 (2%)
Query 1 MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV 60
MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV
Sbjct 1 MIPQPLSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFV 60
Query 61 PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQ--- 117
PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQ
Sbjct 61 PAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLRYLLAVKACFAVFQNRD 120
Query 118 TGTP 121
TG+P
Sbjct 121 TGSP 124
>gi|183981395|ref|YP_001849686.1| hypothetical protein MMAR_1372 [Mycobacterium marinum M]
gi|183174721|gb|ACC39831.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=337
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/150 (68%), Positives = 115/150 (77%), Gaps = 4/150 (2%)
Query 2 IPQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGP 58
IPQPL+Q+GDLARR G L +T + NA +AS AAPGLELSTG+A+AFPR P
Sbjct 8 IPQPLAQIGDLARRTQAAGFSGLLFTETGRTAYLNAAIASQAAPGLELSTGVAVAFPRSP 67
Query 59 FVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQ 117
FV AA AWELQEAT GKF+LGLGTQVR +VV RYGMAF RPGPRLR Y+LAVKACF+ F+
Sbjct 68 FVTAATAWELQEATGGKFRLGLGTQVRTHVVRRYGMAFERPGPRLRDYVLAVKACFSAFR 127
Query 118 TGTPDHHGEFDNPDFITAQWSPARIDPPGP 147
TGT DHHGEF + DFIT QWS ID P P
Sbjct 128 TGTLDHHGEFYDLDFITPQWSAGPIDAPDP 157
>gi|342857385|ref|ZP_08714041.1| hypothetical protein MCOL_00865 [Mycobacterium colombiense CECT
3035]
gi|342134718|gb|EGT87884.1| hypothetical protein MCOL_00865 [Mycobacterium colombiense CECT
3035]
Length=340
Score = 196 bits (498), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 102/150 (68%), Positives = 114/150 (76%), Gaps = 4/150 (2%)
Query 2 IPQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGP 58
IPQPL Q+GDLAR+ G L +T + NA VAS AAP LELSTG+A+AFPR P
Sbjct 8 IPQPLGQIGDLARKTQSAGFSGLLFTETGRTAYLNAAVASQAAPDLELSTGVAVAFPRSP 67
Query 59 FVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQ 117
FV AAAAWELQEAT GKF+LGLGTQVR +VV RYG AF RPGPRLR YLLAVKACFA F+
Sbjct 68 FVTAAAAWELQEATKGKFRLGLGTQVRTHVVRRYGTAFERPGPRLRDYLLAVKACFAAFR 127
Query 118 TGTPDHHGEFDNPDFITAQWSPARIDPPGP 147
+GT DHHG+F + DFIT QWSP ID P P
Sbjct 128 SGTLDHHGDFYDLDFITPQWSPGPIDAPDP 157
>gi|118617986|ref|YP_906318.1| hypothetical protein MUL_2504 [Mycobacterium ulcerans Agy99]
gi|118570096|gb|ABL04847.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=337
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/150 (68%), Positives = 114/150 (76%), Gaps = 4/150 (2%)
Query 2 IPQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGP 58
IPQPL+Q+GDLARR G L +T + NA +AS AAPGLELSTG+A+AFPR P
Sbjct 8 IPQPLAQIGDLARRTQAAGLSGLLFTETGRTAYLNAAIASQAAPGLELSTGVAVAFPRSP 67
Query 59 FVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQ 117
FV AA AWELQEAT GKF+LGLGTQVR +VV RYGMAF RPGPRLR Y+LAVKACF+ F+
Sbjct 68 FVTAATAWELQEATGGKFRLGLGTQVRTHVVRRYGMAFERPGPRLRDYVLAVKACFSAFR 127
Query 118 TGTPDHHGEFDNPDFITAQWSPARIDPPGP 147
TGT DHHGEF + D IT QWS ID P P
Sbjct 128 TGTLDHHGEFYDLDLITPQWSAGPIDAPDP 157
>gi|118464579|ref|YP_881330.1| hypothetical protein MAV_2121 [Mycobacterium avium 104]
gi|118165866|gb|ABK66763.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=341
Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/150 (67%), Positives = 114/150 (76%), Gaps = 4/150 (2%)
Query 2 IPQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGP 58
+PQPL Q+GDLARR G L +T + NA VAS AAPGLELSTG+A+AFPR P
Sbjct 8 VPQPLGQIGDLARRTQSAGFSGLLFTETGRTAYLNAAVASQAAPGLELSTGVAVAFPRSP 67
Query 59 FVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQ 117
FV AA AWELQEAT G+F+LGLGTQVR +VV RYG AF RPGPRLR YLLAVKACFA F+
Sbjct 68 FVTAAVAWELQEATKGRFRLGLGTQVRTHVVRRYGAAFERPGPRLRDYLLAVKACFAAFR 127
Query 118 TGTPDHHGEFDNPDFITAQWSPARIDPPGP 147
+GT +HHG+F + DFIT QWSP ID P P
Sbjct 128 SGTLEHHGDFYDLDFITPQWSPGPIDAPDP 157
>gi|336461752|gb|EGO40612.1| putative oxidoreductase, MSMEG_2256 family [Mycobacterium avium
subsp. paratuberculosis S397]
Length=341
Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/150 (67%), Positives = 114/150 (76%), Gaps = 4/150 (2%)
Query 2 IPQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGP 58
+PQPL Q+GDLARR G L +T + NA VAS AAPGLELSTG+A+AFPR P
Sbjct 8 VPQPLGQIGDLARRTQSAGFSGLLFTETGRTAYLNAAVASQAAPGLELSTGVAVAFPRSP 67
Query 59 FVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQ 117
FV AA AWELQEAT G+F+LGLGTQVR +VV RYG AF RPGPRLR YLLAVKACFA F+
Sbjct 68 FVTAAVAWELQEATEGRFRLGLGTQVRTHVVRRYGAAFERPGPRLRDYLLAVKACFAAFR 127
Query 118 TGTPDHHGEFDNPDFITAQWSPARIDPPGP 147
+GT +HHG+F + DFIT QWSP ID P P
Sbjct 128 SGTLEHHGDFYDLDFITPQWSPGPIDAPDP 157
>gi|254774833|ref|ZP_05216349.1| hypothetical protein MaviaA2_09200 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=336
Score = 193 bits (491), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/150 (67%), Positives = 114/150 (76%), Gaps = 4/150 (2%)
Query 2 IPQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGP 58
+PQPL Q+GDLARR G L +T + NA VAS AAPGLELSTG+A+AFPR P
Sbjct 3 VPQPLGQIGDLARRTQSAGFSGLLFTETGRTAYLNAAVASQAAPGLELSTGVAVAFPRSP 62
Query 59 FVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQ 117
FV AA AWELQEAT G+F+LGLGTQVR +VV RYG AF RPGPRLR YLLAVKACFA F+
Sbjct 63 FVTAAVAWELQEATKGRFRLGLGTQVRTHVVRRYGAAFERPGPRLRDYLLAVKACFAAFR 122
Query 118 TGTPDHHGEFDNPDFITAQWSPARIDPPGP 147
+GT +HHG+F + DFIT QWSP ID P P
Sbjct 123 SGTLEHHGDFYDLDFITPQWSPGPIDAPDP 152
>gi|41408165|ref|NP_961001.1| hypothetical protein MAP2067c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396520|gb|AAS04384.1| hypothetical protein MAP_2067c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=341
Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/150 (66%), Positives = 113/150 (76%), Gaps = 4/150 (2%)
Query 2 IPQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGP 58
+ QPL Q+GDLARR G L +T + NA VAS AAPGLELSTG+A+AFPR P
Sbjct 8 VLQPLGQIGDLARRTQSAGFSGLLFTETGRTAYLNAAVASQAAPGLELSTGVAVAFPRSP 67
Query 59 FVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQ 117
FV AA AWELQEAT G+F+LGLGTQVR +VV RYG AF RPGPRLR YLLAVKACFA F+
Sbjct 68 FVTAAVAWELQEATEGRFRLGLGTQVRTHVVRRYGAAFERPGPRLRDYLLAVKACFAAFR 127
Query 118 TGTPDHHGEFDNPDFITAQWSPARIDPPGP 147
+GT +HHG+F + DFIT QWSP ID P P
Sbjct 128 SGTLEHHGDFYDLDFITPQWSPGPIDAPDP 157
>gi|296166294|ref|ZP_06848732.1| luciferase family protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898389|gb|EFG77957.1| luciferase family protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=341
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/150 (65%), Positives = 113/150 (76%), Gaps = 4/150 (2%)
Query 2 IPQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGP 58
+PQPL ++GDLARR G L +T + NA VAS AAPGLELSTG+A+AFPR P
Sbjct 8 VPQPLQKIGDLARRTQSAGFSGLLFTETGRTAYLNAAVASQAAPGLELSTGVAVAFPRSP 67
Query 59 FVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQ 117
FV AA AWELQEAT G F+LGLGTQVR +VV RYG+AF RPGPRLR YL AVKACFA F+
Sbjct 68 FVTAATAWELQEATGGNFRLGLGTQVRTHVVRRYGVAFERPGPRLRDYLFAVKACFAAFR 127
Query 118 TGTPDHHGEFDNPDFITAQWSPARIDPPGP 147
+GT +HHG+F + DFIT QWSP I+ P P
Sbjct 128 SGTLEHHGDFYDLDFITPQWSPGPIEAPDP 157
>gi|254818736|ref|ZP_05223737.1| hypothetical protein MintA_02369 [Mycobacterium intracellulare
ATCC 13950]
Length=339
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/149 (67%), Positives = 112/149 (76%), Gaps = 4/149 (2%)
Query 3 PQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPF 59
PQPL+Q+G+LARR G L +T + NA VAS AAPGLELSTG+A+AFPR PF
Sbjct 9 PQPLAQIGELARRTQSAGFSGLLFTETGRTAYLNAAVASQAAPGLELSTGVAVAFPRSPF 68
Query 60 VPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQT 118
V AAAAWELQEAT GKF+LGLGTQVR +VV RY AF RPGPRLR YLLAVKACFA F++
Sbjct 69 VTAAAAWELQEATEGKFRLGLGTQVRTHVVRRYSTAFERPGPRLRDYLLAVKACFAAFRS 128
Query 119 GTPDHHGEFDNPDFITAQWSPARIDPPGP 147
GT DHHG+F + DFIT QWSP I P
Sbjct 129 GTLDHHGDFYDLDFITPQWSPGPIGAVDP 157
>gi|240171859|ref|ZP_04750518.1| hypothetical protein MkanA1_21265 [Mycobacterium kansasii ATCC
12478]
Length=337
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/151 (63%), Positives = 114/151 (76%), Gaps = 4/151 (2%)
Query 2 IPQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGP 58
P+PL ++G++AR+ G L + + +A VAS AAPGL+LSTG+A+AFPR P
Sbjct 8 FPEPLGKVGEVARQARAAGFSGLVFTEAGRTAYLSAAVASQAAPGLDLSTGVAVAFPRSP 67
Query 59 FVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQ 117
FV AA AWELQ+AT G+F+LGLGTQVR++VVHRYG AF RPGPRLR Y+LAVKACFA F+
Sbjct 68 FVTAATAWELQDATGGRFRLGLGTQVRRHVVHRYGTAFDRPGPRLRDYVLAVKACFAAFR 127
Query 118 TGTPDHHGEFDNPDFITAQWSPARIDPPGPS 148
TGT DHHGEF + DFIT QWSP ID P P
Sbjct 128 TGTLDHHGEFYDLDFITPQWSPGPIDAPDPK 158
>gi|333990673|ref|YP_004523287.1| hypothetical protein JDM601_2033 [Mycobacterium sp. JDM601]
gi|333486641|gb|AEF36033.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=333
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/151 (64%), Positives = 111/151 (74%), Gaps = 4/151 (2%)
Query 2 IPQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGP 58
+PQPL ++G LARR G L + + NA AS AAPGLELSTG+A+AFPR P
Sbjct 3 VPQPLGKVGALARRTQAAGFSGLLFTEAGRTAYLNAATASQAAPGLELSTGVAVAFPRSP 62
Query 59 FVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQ 117
FV AA AWELQEAT+GKF+LGLGTQVR +VV RYG AF RPGPRLR Y+LAVKACF F+
Sbjct 63 FVTAATAWELQEATAGKFRLGLGTQVRTHVVRRYGAAFDRPGPRLRDYVLAVKACFDAFR 122
Query 118 TGTPDHHGEFDNPDFITAQWSPARIDPPGPS 148
TGT +HHGEF + DFIT QWSP I+ P P
Sbjct 123 TGTLNHHGEFYDLDFITPQWSPGPIEVPDPK 153
>gi|108797837|ref|YP_638034.1| hypothetical protein Mmcs_0862 [Mycobacterium sp. MCS]
gi|119866931|ref|YP_936883.1| hypothetical protein Mkms_0879 [Mycobacterium sp. KMS]
gi|108768256|gb|ABG06978.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693020|gb|ABL90093.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=338
Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/149 (66%), Positives = 108/149 (73%), Gaps = 4/149 (2%)
Query 3 PQPLSQLGDLARR---PGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPF 59
PQPL Q G LARR G L +T + NA VA+ AAPGLELSTG+A+AFPR PF
Sbjct 9 PQPLQQTGGLARRCQEAGFDGLLFTETGRTAYLNAAVAAQAAPGLELSTGVAVAFPRSPF 68
Query 60 VPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQT 118
V AA AWELQEAT G F+LGLGTQVR +VV RYG+ F PGPRLR Y+LAVKACFA F+T
Sbjct 69 VTAATAWELQEATGGNFRLGLGTQVRTHVVRRYGVEFAHPGPRLRDYVLAVKACFAAFRT 128
Query 119 GTPDHHGEFDNPDFITAQWSPARIDPPGP 147
GT DHHGEF + DFIT QWS ID P P
Sbjct 129 GTLDHHGEFYDLDFITPQWSAGPIDAPDP 157
>gi|126433477|ref|YP_001069168.1| hypothetical protein Mjls_0868 [Mycobacterium sp. JLS]
gi|126233277|gb|ABN96677.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=338
Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/149 (66%), Positives = 108/149 (73%), Gaps = 4/149 (2%)
Query 3 PQPLSQLGDLARR---PGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPF 59
PQPL Q G LARR G L +T + NA VA+ AAPGLELSTG+A+AFPR PF
Sbjct 9 PQPLQQTGGLARRCQEAGFDGLLFTETGRTAYLNAAVAAQAAPGLELSTGVAVAFPRSPF 68
Query 60 VPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQT 118
V AA AWELQEAT G F+LGLGTQVR +VV RYG+ F PGPRLR Y+LAVKACFA F+T
Sbjct 69 VTAATAWELQEATGGNFRLGLGTQVRTHVVRRYGVEFAHPGPRLRDYVLAVKACFAAFRT 128
Query 119 GTPDHHGEFDNPDFITAQWSPARIDPPGP 147
GT DHHGEF + DFIT QWS ID P P
Sbjct 129 GTLDHHGEFYDLDFITPQWSAGPIDAPDP 157
>gi|120402180|ref|YP_952009.1| luciferase family protein [Mycobacterium vanbaalenii PYR-1]
gi|119954998|gb|ABM12003.1| luciferase family protein [Mycobacterium vanbaalenii PYR-1]
Length=337
Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/150 (64%), Positives = 108/150 (72%), Gaps = 4/150 (2%)
Query 3 PQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPF 59
PQPL G+LARR G L +T + +A VA+ AAPGLELSTG+A+AFPR PF
Sbjct 9 PQPLQSTGELARRTQEVGFSGLLFTETGRTAYLSAAVAAHAAPGLELSTGVAVAFPRSPF 68
Query 60 VPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQT 118
V AA+AWELQEAT GKF+LGLGTQVR +VV RYG F PGPRLR Y+LAVKACFA F+T
Sbjct 69 VTAASAWELQEATGGKFRLGLGTQVRTHVVRRYGADFEHPGPRLRDYVLAVKACFAAFRT 128
Query 119 GTPDHHGEFDNPDFITAQWSPARIDPPGPS 148
G DHHG+F N DFIT QWS ID P P
Sbjct 129 GKLDHHGQFYNLDFITPQWSAGPIDAPDPK 158
>gi|145225738|ref|YP_001136416.1| luciferase family protein [Mycobacterium gilvum PYR-GCK]
gi|145218224|gb|ABP47628.1| luciferase family protein [Mycobacterium gilvum PYR-GCK]
Length=341
Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/149 (62%), Positives = 106/149 (72%), Gaps = 4/149 (2%)
Query 3 PQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPF 59
PQPL GDLARR G + +T + N A+ AAPGL+LSTG+A+AFPR PF
Sbjct 9 PQPLRSTGDLARRTQGAGFDGMLFTETGRTAYLNVAAAALAAPGLQLSTGVAVAFPRSPF 68
Query 60 VPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQT 118
V AA+AWELQEA+ G F+LGLGTQVR +VV RYG+ F PGPRLR Y+LAVKACF F+T
Sbjct 69 VTAASAWELQEASGGNFRLGLGTQVRTHVVRRYGVEFEHPGPRLRDYVLAVKACFGAFRT 128
Query 119 GTPDHHGEFDNPDFITAQWSPARIDPPGP 147
GT DHHG+F N DFIT QWS ID P P
Sbjct 129 GTLDHHGDFYNLDFITPQWSAGPIDAPDP 157
>gi|315446090|ref|YP_004078969.1| flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin
reductase [Mycobacterium sp. Spyr1]
gi|315264393|gb|ADU01135.1| flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin
reductase [Mycobacterium sp. Spyr1]
Length=341
Score = 156 bits (395), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/149 (62%), Positives = 105/149 (71%), Gaps = 4/149 (2%)
Query 3 PQPLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPF 59
PQPL GDLARR G + +T + N A+ AAPGL+LSTG+A+AFPR PF
Sbjct 9 PQPLRSTGDLARRTQEAGFDGMLFTETGRTAYLNVAAAALAAPGLQLSTGVAVAFPRSPF 68
Query 60 VPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQT 118
V AA+AWELQEA G F+LGLGTQVR +VV RYG+ F PGPRLR Y+LAVKACF F+T
Sbjct 69 VTAASAWELQEACGGNFRLGLGTQVRTHVVRRYGVEFEHPGPRLRDYVLAVKACFGAFRT 128
Query 119 GTPDHHGEFDNPDFITAQWSPARIDPPGP 147
GT DHHG+F N DFIT QWS ID P P
Sbjct 129 GTLDHHGDFYNLDFITPQWSAGPIDAPDP 157
>gi|254483361|ref|ZP_05096591.1| hypothetical protein GPB2148_2551 [marine gamma proteobacterium
HTCC2148]
gi|214036345|gb|EEB77022.1| hypothetical protein GPB2148_2551 [marine gamma proteobacterium
HTCC2148]
Length=335
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/119 (43%), Positives = 75/119 (64%), Gaps = 8/119 (6%)
Query 35 TVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGM 94
+A+ APGL+L+TGIA+AFPR P A AW+LQ+ ++G F LGLG+Q++ ++ R+G+
Sbjct 43 VMAAEHAPGLDLATGIAVAFPRNPMHLAYQAWDLQKFSNGHFYLGLGSQIKAHIEKRFGI 102
Query 95 AFHRPGPRLR-YLLAVKACFAVFQTGTP-DHHGEFDNPDFITAQWSPARIDPPGPSPAG 151
AF P R+R Y+ A+KA F +Q G+P D G F +T + PGP+P G
Sbjct 103 AFDPPASRMREYIQALKAIFDCWQHGSPMDFDGRFYKHTLMTPMFD------PGPNPHG 155
>gi|108803783|ref|YP_643720.1| luciferase-like protein [Rubrobacter xylanophilus DSM 9941]
gi|108765026|gb|ABG03908.1| luciferase-like protein [Rubrobacter xylanophilus DSM 9941]
Length=341
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/145 (39%), Positives = 81/145 (56%), Gaps = 5/145 (3%)
Query 6 LSQLGDLAR---RPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVPA 62
L ++G++AR G L + +T + VA L+L T +A+AF R P A
Sbjct 14 LRRIGEVARAAEELGFSGLVTSETKHDAFLPLAVAGSVTRRLQLLTSVAIAFSRSPMEMA 73
Query 63 AAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTGTP 121
AW+LQE + G+ LGLGTQVR ++ R+GM + RP R R Y+LA++A + FQ GTP
Sbjct 74 QTAWDLQELSEGRLILGLGTQVRAHITRRFGMPWGRPVARFREYILALRAIWDAFQNGTP 133
Query 122 -DHHGEFDNPDFITAQWSPARIDPP 145
+ GEF +T ++P ID P
Sbjct 134 LNFEGEFYRHTLLTPFFNPGPIDHP 158
>gi|269128352|ref|YP_003301722.1| hypothetical protein Tcur_4157 [Thermomonospora curvata DSM 43183]
gi|268313310|gb|ACY99684.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183]
Length=345
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/148 (37%), Positives = 84/148 (57%), Gaps = 5/148 (3%)
Query 5 PLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVP 61
PLS++G A+R G VL P+T + + A +A L + T + +AFPR P +
Sbjct 12 PLSEVGRYAQRIESLGYDVLHVPETIHDAFTVAALAITHTSRLVIRTSMVVAFPRSPMLT 71
Query 62 AAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRL-RYLLAVKACFAVFQTGT 120
A AAW+L + ++G+FQLG+ +QVR N+V R+ + P RL Y+ +++A F FQTG
Sbjct 72 AYAAWDLAKLSAGRFQLGIASQVRGNIVGRFSTPWSDPVARLGDYVASLRAIFHSFQTGE 131
Query 121 P-DHHGEFDNPDFITAQWSPARIDPPGP 147
P +H G + + ++P ID P P
Sbjct 132 PLEHTGSHYRFERLQPYFNPGPIDHPAP 159
>gi|156743881|ref|YP_001434010.1| luciferase family protein [Roseiflexus castenholzii DSM 13941]
gi|156235209|gb|ABU59992.1| luciferase family protein [Roseiflexus castenholzii DSM 13941]
Length=342
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/145 (37%), Positives = 82/145 (57%), Gaps = 5/145 (3%)
Query 6 LSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVPA 62
L++ G +AR G L +P+T T+A+ + L T +A+AF R P V A
Sbjct 14 LNEAGKIARAAEAVGFAALWTPETQHNPFLPLTLAADHTAEIHLGTAVAIAFARSPMVMA 73
Query 63 AAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTGTP 121
AW+LQ + G+F LGLGTQV+ ++ R+GM + P P+LR Y+ A++A + FQTG
Sbjct 74 QIAWDLQAFSGGRFILGLGTQVKAHIERRFGMTWDPPVPKLRDYIQALRAIWQAFQTGAK 133
Query 122 -DHHGEFDNPDFITAQWSPARIDPP 145
D+ G+F N ++ ++P I P
Sbjct 134 LDYRGQFYNHTLMSPFFNPGPIADP 158
>gi|269836561|ref|YP_003318789.1| Luciferase-like monooxygenase [Sphaerobacter thermophilus DSM
20745]
gi|269785824|gb|ACZ37967.1| Luciferase-like monooxygenase [Sphaerobacter thermophilus DSM
20745]
Length=350
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/152 (38%), Positives = 80/152 (53%), Gaps = 11/152 (7%)
Query 6 LSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVPA 62
Q+ LARR G L P+ +A+P L L+T +A+AFPR P V A
Sbjct 12 FEQIPALARRLEELGFDGLAQPELKHHPFVALALAAPVTQRLTLATSVAIAFPRSPMVVA 71
Query 63 AAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTGTP 121
A +LQ + G+F LGLGTQV+ ++ R+ + PGPRLR Y+LA++A + +QTG P
Sbjct 72 YQAHDLQRLSRGRFVLGLGTQVKGHIERRFSTTWDSPGPRLREYVLALRAIWKTWQTGEP 131
Query 122 -DHHGEFDNPDFITAQWSPARIDPPGPSPAGP 152
D G F +T ++ PGP P P
Sbjct 132 LDFQGRFYRFSLMTPEFD------PGPIPYHP 157
>gi|148655273|ref|YP_001275478.1| luciferase family protein [Roseiflexus sp. RS-1]
gi|148567383|gb|ABQ89528.1| luciferase family protein [Roseiflexus sp. RS-1]
Length=341
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/145 (37%), Positives = 83/145 (58%), Gaps = 5/145 (3%)
Query 6 LSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVPA 62
L++ G +AR G L +P+T T+A+ ++L T +A+AF R P V A
Sbjct 14 LNEAGRIARAAEAVGFAGLWTPETQHNPFLPLTLAADHTAEIQLGTAVAIAFARSPMVTA 73
Query 63 AAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTGTP 121
AW+LQ + G+F LGLGTQV+ ++ R+GM + P P+LR Y+ A++A + FQTG
Sbjct 74 QIAWDLQAFSGGRFILGLGTQVKAHIERRFGMPWDPPVPKLRDYIQALRAIWQAFQTGGK 133
Query 122 -DHHGEFDNPDFITAQWSPARIDPP 145
D+ G+F N ++ ++P I P
Sbjct 134 LDYRGQFYNHTLMSPFFNPGPITHP 158
>gi|297182521|gb|ADI18682.1| coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin
reductase and related flavin-dependent oxidoreductases [uncultured
Chloroflexi bacterium HF4000_28F02]
Length=340
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/144 (34%), Positives = 80/144 (56%), Gaps = 2/144 (1%)
Query 6 LSQLGDLARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVPAAAA 65
+++ A G LC+ A + +A+ + L T +A+AFPR P V A AA
Sbjct 17 IAEEAKWAEDMGYDGLCTEDAAHDPMMPLMLAASTTSRVTLETRVAIAFPRSPMVLAYAA 76
Query 66 WELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTGTP-DH 123
+LQ+ + G+F+LGLGTQV+ ++ R+ + PGPR+R Y+ ++ A + +Q G ++
Sbjct 77 RDLQDFSEGRFRLGLGTQVKGHIQRRFSTEWTAPGPRMREYVQSLHAIWVAWQNGERLEY 136
Query 124 HGEFDNPDFITAQWSPARIDPPGP 147
HG+ N +T +SP + D P P
Sbjct 137 HGDHYNFSLMTPFFSPGKSDQPPP 160
>gi|229488867|ref|ZP_04382733.1| f420-dependent oxidoreductase family protein [Rhodococcus erythropolis
SK121]
gi|229324371|gb|EEN90126.1| f420-dependent oxidoreductase family protein [Rhodococcus erythropolis
SK121]
Length=338
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/149 (37%), Positives = 76/149 (52%), Gaps = 5/149 (3%)
Query 5 PLSQLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVP 61
PL Q+ RR G + +T + A +A + L + T + +AF R P V
Sbjct 12 PLRQVAQHVRRIENLGFDTVHISETIRDPFAVAALAVEHSSTLTVRTSMVVAFARSPMVT 71
Query 62 AAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTGT 120
A AAW+L + G+FQLGL TQVR N+V RY M + P +LR Y+ AV+ F VFQ G
Sbjct 72 ALAAWDLAGFSGGRFQLGLATQVRGNIVGRYSMPWTDPVAQLRDYVSAVREIFRVFQEGG 131
Query 121 P-DHHGEFDNPDFITAQWSPARIDPPGPS 148
DH G D + ++P +D P P
Sbjct 132 ELDHAGTHYTFDRLQPYFNPGPLDVPAPE 160
>gi|183982982|ref|YP_001851273.1| hypothetical protein MMAR_2980 [Mycobacterium marinum M]
gi|183176308|gb|ACC41418.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=360
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/112 (38%), Positives = 66/112 (59%), Gaps = 1/112 (0%)
Query 14 RRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATS 73
R G V+ P+T + + AT+A + + T + +AFPR P + A AAW+L + +
Sbjct 24 ERLGFDVIHVPETIHDAFTVATLALTHTQRIIVRTSMIVAFPRSPMLTAYAAWDLAKYSD 83
Query 74 GKFQLGLGTQVRKNVVHRYGMAFHRPGPRL-RYLLAVKACFAVFQTGTPDHH 124
G+F+LG+ +QVR N+V R+ + P RL Y+ +++A F FQTG P HH
Sbjct 84 GRFELGIASQVRGNIVGRFSTEWSDPVSRLGDYVNSLRAIFDSFQTGAPLHH 135
>gi|219849970|ref|YP_002464403.1| luciferase family protein [Chloroflexus aggregans DSM 9485]
gi|219544229|gb|ACL25967.1| luciferase family protein [Chloroflexus aggregans DSM 9485]
Length=342
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/131 (37%), Positives = 74/131 (57%), Gaps = 2/131 (1%)
Query 17 GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKF 76
G L +P+TA T+A+ L + T +A+AFPR P V A AW+L + G+F
Sbjct 29 GFAALWAPETAHNPFLPLTIAAEHTRRLTIGTAVAIAFPRSPMVTAQIAWDLAGFSGGRF 88
Query 77 QLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTGTP-DHHGEFDNPDFIT 134
LGLGTQV+ ++ R+ + P RLR Y+ A++A + +QTG+ D+ G++ +T
Sbjct 89 VLGLGTQVKAHIERRFSSVWDSPVGRLRDYIGALRAIWQCWQTGSKLDYRGQYYQHTLMT 148
Query 135 AQWSPARIDPP 145
+SP ID P
Sbjct 149 PFFSPGPIDHP 159
>gi|209884142|ref|YP_002287999.1| hypothetical protein OCAR_4999 [Oligotropha carboxidovorans OM5]
gi|337742163|ref|YP_004633891.1| F420-dependent oxidoreductase, luciferase-like protein [Oligotropha
carboxidovorans OM5]
gi|209872338|gb|ACI92134.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
gi|336099827|gb|AEI07650.1| putative F420-dependent oxidoreductase, luciferase-like protein
[Oligotropha carboxidovorans OM5]
Length=352
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/108 (39%), Positives = 65/108 (61%), Gaps = 2/108 (1%)
Query 21 LCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGL 80
+ S +T S +A+ A L+++T +A+AF R P+ A AAW LQ + G+F LGL
Sbjct 43 VVSTETKDDSYIMMALAADATTTLQIATSVAIAFARAPYTTAMAAWRLQALSRGRFTLGL 102
Query 81 GTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTGTP-DHHGE 126
G QV+ ++V R+G+ F GP +R Y+ AV+A + +Q GT D+ E
Sbjct 103 GPQVKAHIVRRFGIPFTPAGPWMRDYIGAVRAFWDCWQNGTKLDYESE 150
>gi|226308594|ref|YP_002768554.1| oxidoreductase [Rhodococcus erythropolis PR4]
gi|226187711|dbj|BAH35815.1| putative oxidoreductase [Rhodococcus erythropolis PR4]
Length=338
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/117 (40%), Positives = 65/117 (56%), Gaps = 2/117 (1%)
Query 34 ATVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYG 93
A +A + L + T + +AF R P V A AAW+L + G+FQLGL TQVR N+V RY
Sbjct 44 AALAVEHSSTLTVRTSMVVAFARSPMVTALAAWDLAGFSGGRFQLGLATQVRGNIVGRYS 103
Query 94 MAFHRPGPRLR-YLLAVKACFAVFQTGTP-DHHGEFDNPDFITAQWSPARIDPPGPS 148
M + P +LR Y+ AV+ F FQTG D+ G + + ++P +D P P
Sbjct 104 MPWTNPVAQLRDYVSAVREIFQAFQTGGELDYAGSHYTFNRLQPYFNPGPLDVPAPE 160
>gi|312198013|ref|YP_004018074.1| F420-dependent oxidoreductase [Frankia sp. EuI1c]
gi|311229349|gb|ADP82204.1| putative F420-dependent oxidoreductase [Frankia sp. EuI1c]
Length=361
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/118 (39%), Positives = 70/118 (60%), Gaps = 8/118 (6%)
Query 36 VASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMA 95
VA+ L+L T +A+AFPR P A AA++LQ + G+F+LGLG+QVR ++ RYG
Sbjct 45 VAAAPVCSLDLLTNVAIAFPRSPLHLAHAAYDLQLLSRGRFRLGLGSQVRAHIEKRYGAR 104
Query 96 FHRPGPRLR-YLLAVKACFAVFQTGTP-DHHGEFDNPDFITAQWSPARIDPPGPSPAG 151
+ RP ++R ++LA K +Q GT D GE+ + +T ++ PGP+P G
Sbjct 105 WDRPVAQMREWVLATKTILDSWQNGTRLDFRGEYTSHTLMTPAFN------PGPNPYG 156
>gi|163846028|ref|YP_001634072.1| luciferase family protein [Chloroflexus aurantiacus J-10-fl]
gi|222523756|ref|YP_002568226.1| Luciferase-like monooxygenase [Chloroflexus sp. Y-400-fl]
gi|163667317|gb|ABY33683.1| luciferase family protein [Chloroflexus aurantiacus J-10-fl]
gi|222447635|gb|ACM51901.1| Luciferase-like monooxygenase [Chloroflexus sp. Y-400-fl]
Length=346
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/131 (36%), Positives = 72/131 (55%), Gaps = 2/131 (1%)
Query 17 GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKF 76
G L +P+TA T+A+ L + T +A+AFPR P V A AW+L + G+F
Sbjct 33 GFAALWAPETAHNPFLALTIAAEHTQQLTIGTAVAIAFPRSPMVTAQIAWDLAGFSGGRF 92
Query 77 QLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTGTP-DHHGEFDNPDFIT 134
LGLGTQV+ ++ R+ + P RLR Y+ A++A + +QTG D+ G++ +T
Sbjct 93 VLGLGTQVKAHIERRFSSVWDSPVGRLRDYIGALRAIWHCWQTGGKLDYRGQYYQHTLMT 152
Query 135 AQWSPARIDPP 145
+SP I P
Sbjct 153 PFFSPGPIAHP 163
>gi|108798527|ref|YP_638724.1| hypothetical protein Mmcs_1557 [Mycobacterium sp. MCS]
gi|119867627|ref|YP_937579.1| hypothetical protein Mkms_1581 [Mycobacterium sp. KMS]
gi|108768946|gb|ABG07668.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693716|gb|ABL90789.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=327
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/109 (42%), Positives = 64/109 (59%), Gaps = 3/109 (2%)
Query 43 GLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPR 102
GL+L T +A+AFPR P A A + Q + G+F LGLGTQ+R + R+G F RP R
Sbjct 46 GLDLMTNVAIAFPRNPIHLAHQAIDHQVLSGGRFTLGLGTQIRTQIEKRFGADFDRPVAR 105
Query 103 LRYLL-AVKACFAVFQTGTP-DHHGEFDNPDFITAQWSPARIDPPGPSP 149
+ ++ A++A FA + TG P D GEF +T ++P R + GP P
Sbjct 106 MTEMIGALRAIFATWSTGEPLDFRGEFYRHTLMTPNFTP-RGNDFGPPP 153
>gi|256374455|ref|YP_003098115.1| luciferase-like monooxygenase [Actinosynnema mirum DSM 43827]
gi|255918758|gb|ACU34269.1| Luciferase-like monooxygenase [Actinosynnema mirum DSM 43827]
Length=364
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/109 (41%), Positives = 64/109 (59%), Gaps = 8/109 (7%)
Query 46 LSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR- 104
L T IA+AF R P A A +LQ + G+F+LGLG+QV +++ R+GM + RP R+R
Sbjct 99 LGTAIAVAFARNPMSTAVQANDLQLLSRGRFRLGLGSQVEQHITKRFGMPWSRPAARMRE 158
Query 105 YLLAVKACFAVFQTGT-PDHHGEFDNPDFITAQWSPARIDPPGPSPAGP 152
Y+LA++A + + TG P GEF +T + PGP+P GP
Sbjct 159 YVLAMRAIWESWATGERPRFRGEFSTHTLMTPFFD------PGPNPFGP 201
>gi|312198080|ref|YP_004018141.1| F420-dependent oxidoreductase [Frankia sp. EuI1c]
gi|311229416|gb|ADP82271.1| putative F420-dependent oxidoreductase [Frankia sp. EuI1c]
Length=339
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/107 (40%), Positives = 64/107 (60%), Gaps = 2/107 (1%)
Query 35 TVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGM 94
+A+ LE+ T IA+AF R P A W+LQ + G+F LGLG+QVR ++ R+GM
Sbjct 43 VLAAEHTSRLEIGTCIAVAFARNPMSVAQLGWDLQAYSQGRFVLGLGSQVRPHIEKRFGM 102
Query 95 AFHRPGPRLR-YLLAVKACFAVFQTGTP-DHHGEFDNPDFITAQWSP 139
+ +P R+R ++LA++A +A +Q GTP GEF +T + P
Sbjct 103 PWGQPVSRMREFILALRAIWASWQDGTPLRFEGEFFTHTLMTPTFVP 149
>gi|297181701|gb|ADI17883.1| coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin
reductase and related flavin-dependent oxidoreductases [uncultured
Chloroflexi bacterium HF0200_06I16]
Length=340
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/137 (34%), Positives = 74/137 (55%), Gaps = 2/137 (1%)
Query 13 ARRPGRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEAT 72
A G LC+ A + +A+ + L +A+AFPR P V A A +LQ+ +
Sbjct 24 AESMGYDGLCTEDAAHDPMLPLIMAASKTSRVTLEPRVAIAFPRSPMVLAYTARDLQDYS 83
Query 73 SGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTGTP-DHHGEFDNP 130
G+F+LGLGTQV+ ++ R+ + PGPR+R Y+ ++ A + ++TG +HGE N
Sbjct 84 GGRFRLGLGTQVKGHIQRRFSTEWTSPGPRIREYVQSLYAIWKSWETGDGLSYHGEHYNF 143
Query 131 DFITAQWSPARIDPPGP 147
+T +SP + P P
Sbjct 144 SLMTPFFSPGGSEQPRP 160
>gi|309792140|ref|ZP_07686612.1| luciferase family protein [Oscillochloris trichoides DG6]
gi|308225681|gb|EFO79437.1| luciferase family protein [Oscillochloris trichoides DG6]
Length=339
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/131 (35%), Positives = 71/131 (55%), Gaps = 2/131 (1%)
Query 17 GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKF 76
G L +P+T T+A+ + + T +A+AFPR P V A AW+L + G+F
Sbjct 28 GFAALWTPETGHNGFLPLTLAAEHTSRISIGTAVAIAFPRSPMVTAQIAWDLAAFSGGRF 87
Query 77 QLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTGTP-DHHGEFDNPDFIT 134
LGLGTQV+ ++ R+ + P RL Y+LA++A + +QTG ++ G F +T
Sbjct 88 ILGLGTQVKAHIERRFSTPWDAPVGRLHDYILALRAIWQSWQTGERLNYRGRFYQHTLMT 147
Query 135 AQWSPARIDPP 145
+SP I+ P
Sbjct 148 PFFSPGPIEHP 158
>gi|120402818|ref|YP_952647.1| hypothetical protein Mvan_1819 [Mycobacterium vanbaalenii PYR-1]
gi|119955636|gb|ABM12641.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=329
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/101 (42%), Positives = 58/101 (58%), Gaps = 2/101 (1%)
Query 36 VASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMA 95
V + GL+ + +A+AFPR P A A +LQ T G+F LGLGTQVR + RYG A
Sbjct 42 VLASTVKGLDSMSNVAIAFPRNPIQLAHQANDLQLLTEGRFILGLGTQVRAQIEKRYGAA 101
Query 96 FHRPGPRLRYLL-AVKACFAVFQTGTP-DHHGEFDNPDFIT 134
F RP R++ ++ A++A FA + G D GEF +T
Sbjct 102 FDRPVERMKEMVGALRAIFAAWNEGERLDFRGEFYRHTLMT 142
>gi|126434125|ref|YP_001069816.1| hypothetical protein Mjls_1527 [Mycobacterium sp. JLS]
gi|126233925|gb|ABN97325.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=327
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/109 (41%), Positives = 63/109 (58%), Gaps = 3/109 (2%)
Query 43 GLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPR 102
GL+L T +A+AFPR P A A + Q + G+F LGLGTQ+R + R+G F RP R
Sbjct 46 GLDLMTNVAIAFPRNPIHLAHQAIDHQILSGGRFTLGLGTQIRTQIEKRFGAEFDRPVAR 105
Query 103 LRYLL-AVKACFAVFQTGTP-DHHGEFDNPDFITAQWSPARIDPPGPSP 149
+ ++ A++A FA + TG D GEF +T ++P R + GP P
Sbjct 106 MTEMIGALRAIFATWSTGERLDFRGEFYRHTLMTPNFTP-RGNDFGPPP 153
>gi|312195894|ref|YP_004015955.1| F420-dependent oxidoreductase [Frankia sp. EuI1c]
gi|311227230|gb|ADP80085.1| putative F420-dependent oxidoreductase [Frankia sp. EuI1c]
Length=341
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/118 (38%), Positives = 70/118 (60%), Gaps = 8/118 (6%)
Query 36 VASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMA 95
VA+ L+L T +A+AFPR P A AA++L ++G+F+LGLG+QVR +V HR+G
Sbjct 45 VAAAPVCSLDLMTNVAIAFPRSPMHLAHAAYDLHLLSAGRFRLGLGSQVRAHVEHRFGAR 104
Query 96 FHRPGPRLR-YLLAVKACFAVFQT-GTPDHHGEFDNPDFITAQWSPARIDPPGPSPAG 151
+ +P ++R ++LA +A +Q G D GE+ +T ++ PGP+P G
Sbjct 105 WGKPVAQMREWVLATRAILDSWQHGGRLDFRGEYTTHTLMTPAFN------PGPNPYG 156
>gi|288917555|ref|ZP_06411920.1| Luciferase-like monooxygenase [Frankia sp. EUN1f]
gi|288351101|gb|EFC85313.1| Luciferase-like monooxygenase [Frankia sp. EUN1f]
Length=340
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/98 (40%), Positives = 60/98 (62%), Gaps = 2/98 (2%)
Query 44 LELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRL 103
LE+ T IA+AF R P A W+LQ + G+F LGLG+QVR ++ R+GM + +P R+
Sbjct 52 LEIGTCIAVAFARNPMSVAQLGWDLQTYSQGRFVLGLGSQVRAHIEKRFGMPWGKPVGRM 111
Query 104 R-YLLAVKACFAVFQTGTP-DHHGEFDNPDFITAQWSP 139
R ++LA++A +A +Q G P G+F +T + P
Sbjct 112 REFVLALRAIWAAWQEGNPLRFEGDFYTHKLMTPAFVP 149
>gi|145225079|ref|YP_001135757.1| hypothetical protein Mflv_4500 [Mycobacterium gilvum PYR-GCK]
gi|315445448|ref|YP_004078327.1| flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin
reductase [Mycobacterium sp. Spyr1]
gi|145217565|gb|ABP46969.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315263751|gb|ADU00493.1| flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin
reductase [Mycobacterium sp. Spyr1]
Length=325
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/107 (42%), Positives = 62/107 (58%), Gaps = 3/107 (2%)
Query 35 TVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGM 94
T+AS GL+L T +A+AFPR P A A + Q + G+F LGLGTQ+R + RYG
Sbjct 39 TLASTVG-GLDLMTNVAIAFPRNPIHLAHQAVDHQLLSGGRFTLGLGTQIRTQIEKRYGT 97
Query 95 AFHRPGPRLRYLL-AVKACFAVFQTGTP-DHHGEFDNPDFITAQWSP 139
F RP R+R L+ A++A F + TG + GEF +T ++P
Sbjct 98 DFDRPVARMRDLVGALRAIFHTWSTGDRLAYRGEFYRHTLMTPTFTP 144
>gi|119474731|ref|ZP_01615084.1| PROBABLE OXIDOREDUCTASE [marine gamma proteobacterium HTCC2143]
gi|119450934|gb|EAW32167.1| PROBABLE OXIDOREDUCTASE [marine gamma proteobacterium HTCC2143]
Length=336
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/114 (34%), Positives = 69/114 (61%), Gaps = 2/114 (1%)
Query 36 VASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMA 95
+A+ + +E+ TGIA+AF R P + A + +L + G+F LGLG+Q++ ++ R+ M
Sbjct 44 IAAEHSEKIEIKTGIAVAFARSPMILANLSHDLNAYSKGRFTLGLGSQIKPHISKRFSMP 103
Query 96 FHRPGPRLRYL-LAVKACFAVFQTGTP-DHHGEFDNPDFITAQWSPARIDPPGP 147
+ +PGP++R L LA++A +A + G P + GE+ +T ++P I+ P
Sbjct 104 WGKPGPQMRELILAMRAIWANWYEGKPLEFVGEYYKHTLMTPAFTPENIEYGAP 157
>gi|118469756|ref|YP_886399.1| hypothetical protein MSMEG_2037 [Mycobacterium smegmatis str.
MC2 155]
gi|118171043|gb|ABK71939.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=329
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/102 (43%), Positives = 60/102 (59%), Gaps = 3/102 (2%)
Query 35 TVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGM 94
T+AS G++L T +A+AFPR P A A + Q + G+F LGLGTQ+R + R+G
Sbjct 42 TLASTVG-GVDLMTNVAIAFPRNPIHLAHQAIDHQLLSGGRFTLGLGTQIRTQIEKRFGA 100
Query 95 AFHRPGPRLRYLL-AVKACFAVFQTGTP-DHHGEFDNPDFIT 134
F RP R+R L+ A++A F +QTG D GEF +T
Sbjct 101 DFERPVGRMRELIGALRAIFDAWQTGERLDFRGEFYRHTLMT 142
>gi|325673540|ref|ZP_08153231.1| putative oxidoreductase [Rhodococcus equi ATCC 33707]
gi|325555561|gb|EGD25232.1| putative oxidoreductase [Rhodococcus equi ATCC 33707]
Length=341
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/116 (38%), Positives = 63/116 (55%), Gaps = 4/116 (3%)
Query 8 QLGDLARRP---GRRVLCSPKTAAPSISNATVASPAAPGLELSTGIALAFPRGPFVPAAA 64
++ D ARR G L +T A +A A L + T +ALAF R P + A
Sbjct 15 RVADFARRAEAAGYDGLHVSETVHDPFLLALLALQATERLIVRTSVALAFVRSPLLTAYT 74
Query 65 AWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTG 119
AW+L + + G+F LGLG+Q+R+N+ RY M + P +R Y+ V+A F F+TG
Sbjct 75 AWDLSKMSGGRFHLGLGSQIRQNIEERYAMPWTAPAAAMREYVGVVRAAFETFRTG 130
>gi|254481806|ref|ZP_05095049.1| hypothetical protein GPB2148_1497 [marine gamma proteobacterium
HTCC2148]
gi|214037935|gb|EEB78599.1| hypothetical protein GPB2148_1497 [marine gamma proteobacterium
HTCC2148]
Length=340
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/77 (45%), Positives = 52/77 (68%), Gaps = 1/77 (1%)
Query 44 LELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGLGTQVRKNVVHRYGMAFHRPGPRL 103
L + TG+ +AF R P V A A+W+L + + G+F+LGLGTQ++ N+ RY + P P+L
Sbjct 55 LIVGTGVLVAFARSPMVTAIASWDLAKLSKGRFELGLGTQIKPNIEQRYSARWGSPVPQL 114
Query 104 R-YLLAVKACFAVFQTG 119
R Y+ ++KA F FQ+G
Sbjct 115 REYVQSLKAIFHSFQSG 131
Lambda K H
0.320 0.137 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127769454500
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40