BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3194c Length=340 Score E Sequences producing significant alignments: (Bits) Value gi|308232368|ref|ZP_07415850.2| conserved secreted protein [Myco... 686 0.0 gi|15610330|ref|NP_217710.1| hypothetical protein Rv3194c [Mycob... 684 0.0 gi|289755310|ref|ZP_06514688.1| conserved hypothetical protein [... 681 0.0 gi|15842776|ref|NP_337813.1| PDZ domain-containing protein [Myco... 669 0.0 gi|240169968|ref|ZP_04748627.1| serine protease [Mycobacterium k... 577 6e-163 gi|118617988|ref|YP_906320.1| serine protease [Mycobacterium ulc... 565 3e-159 gi|296169043|ref|ZP_06850705.1| PDZ domain family protein [Mycob... 564 6e-159 gi|254821685|ref|ZP_05226686.1| PDZ domain-containing protein [M... 563 1e-158 gi|183981393|ref|YP_001849684.1| serine protease [Mycobacterium ... 563 1e-158 gi|41409390|ref|NP_962226.1| hypothetical protein MAP3292c [Myco... 555 3e-156 gi|118463477|ref|YP_883286.1| PDZ domain-containing protein [Myc... 554 1e-155 gi|342861147|ref|ZP_08717796.1| PDZ domain-containing protein [M... 550 9e-155 gi|15827268|ref|NP_301531.1| hypothetical protein [Mycobacterium... 545 4e-153 gi|336459541|gb|EGO38478.1| putative secreted PDZ domain-contain... 540 2e-151 gi|333991546|ref|YP_004524160.1| serine protease [Mycobacterium ... 498 8e-139 gi|108798385|ref|YP_638582.1| PDZ/DHR/GLGF [Mycobacterium sp. MC... 489 2e-136 gi|119867482|ref|YP_937434.1| PDZ/DHR/GLGF domain-containing pro... 488 5e-136 gi|118472005|ref|YP_886324.1| PDZ domain-containing protein [Myc... 485 3e-135 gi|315445529|ref|YP_004078408.1| secreted protein containing a P... 474 7e-132 gi|145225233|ref|YP_001135911.1| PDZ/DHR/GLGF [Mycobacterium gil... 474 8e-132 gi|120402812|ref|YP_952641.1| PDZ/DHR/GLGF domain-containing pro... 472 3e-131 gi|169630580|ref|YP_001704229.1| hypothetical protein MAB_3499c ... 464 7e-129 gi|111023350|ref|YP_706322.1| hypothetical protein RHA1_ro06387 ... 342 4e-92 gi|226365857|ref|YP_002783640.1| hypothetical protein ROP_64480 ... 340 2e-91 gi|226305716|ref|YP_002765676.1| hypothetical protein RER_22290 ... 330 3e-88 gi|229491009|ref|ZP_04384842.1| PDZ domain protein [Rhodococcus ... 322 8e-86 gi|54026501|ref|YP_120743.1| hypothetical protein nfa45280 [Noca... 321 8e-86 gi|312140606|ref|YP_004007942.1| hypothetical protein REQ_32640 ... 314 1e-83 gi|325675767|ref|ZP_08155451.1| PDZ domain family protein [Rhodo... 314 2e-83 gi|333921394|ref|YP_004494975.1| hypothetical protein AS9A_3737 ... 310 2e-82 gi|134097696|ref|YP_001103357.1| PDZ/DHR/GLGF [Saccharopolyspora... 301 1e-79 gi|257054824|ref|YP_003132656.1| putative secreted protein conta... 300 3e-79 gi|291006344|ref|ZP_06564317.1| PDZ/DHR/GLGF [Saccharopolyspora ... 299 6e-79 gi|145294946|ref|YP_001137767.1| hypothetical protein cgR_0892 [... 288 8e-76 gi|256375084|ref|YP_003098744.1| PDZ/DHR/GLGF domain-containing ... 288 1e-75 gi|19552009|ref|NP_600011.1| hypothetical protein NCgl0749 [Cory... 283 2e-74 gi|25027355|ref|NP_737409.1| hypothetical protein CE0799 [Coryne... 282 7e-74 gi|259506506|ref|ZP_05749408.1| PDZ domain family protein [Coryn... 281 1e-73 gi|227505544|ref|ZP_03935593.1| S16 family peptidase [Corynebact... 280 2e-73 gi|227832534|ref|YP_002834241.1| hypothetical protein cauri_0706... 278 6e-73 gi|337290220|ref|YP_004629241.1| hypothetical protein CULC22_006... 278 1e-72 gi|334696341|gb|AEG81138.1| putative secreted protein [Corynebac... 278 1e-72 gi|227502919|ref|ZP_03932968.1| S16 family peptidase [Corynebact... 275 1e-71 gi|260577884|ref|ZP_05845815.1| PDZ domain family protein [Coryn... 274 1e-71 gi|300783170|ref|YP_003763461.1| PDZ domain-containing protein [... 274 2e-71 gi|317508132|ref|ZP_07965815.1| PDZ domain-containing protein [S... 273 2e-71 gi|302524553|ref|ZP_07276895.1| hypothetical protein SSMG_00935 ... 273 2e-71 gi|159039639|ref|YP_001538892.1| hypothetical protein Sare_4111 ... 273 3e-71 gi|262203367|ref|YP_003274575.1| hypothetical protein Gbro_3489 ... 273 3e-71 gi|68536692|ref|YP_251397.1| hypothetical protein jk1605 [Coryne... 273 3e-71 >gi|308232368|ref|ZP_07415850.2| conserved secreted protein [Mycobacterium tuberculosis SUMu001] gi|308370181|ref|ZP_07420573.2| conserved secreted protein [Mycobacterium tuberculosis SUMu002] gi|308371264|ref|ZP_07424380.2| conserved secreted protein [Mycobacterium tuberculosis SUMu003] 15 more sequence titles Length=361 Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/340 (100%), Positives = 340/340 (100%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT Sbjct 22 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 81 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA Sbjct 82 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 141 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP Sbjct 142 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 201 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG Sbjct 202 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 261 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK Sbjct 262 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 321 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC Sbjct 322 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 361 >gi|15610330|ref|NP_217710.1| hypothetical protein Rv3194c [Mycobacterium tuberculosis H37Rv] gi|31794368|ref|NP_856861.1| hypothetical protein Mb3216c [Mycobacterium bovis AF2122/97] gi|121639076|ref|YP_979300.1| putative secreted protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 51 more sequence titles Length=340 Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/340 (99%), Positives = 340/340 (100%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT Sbjct 1 MNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA Sbjct 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP Sbjct 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG Sbjct 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK Sbjct 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC Sbjct 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 >gi|289755310|ref|ZP_06514688.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289695897|gb|EFD63326.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=340 Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/340 (99%), Positives = 339/340 (99%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPT DTLGEIDGKQVVQIVGTQTYPT Sbjct 1 MNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTVDTLGEIDGKQVVQIVGTQTYPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA Sbjct 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 AA+YAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP Sbjct 121 AAKYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG Sbjct 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK Sbjct 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC Sbjct 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 >gi|15842776|ref|NP_337813.1| PDZ domain-containing protein [Mycobacterium tuberculosis CDC1551] gi|254233803|ref|ZP_04927128.1| hypothetical protein TBCG_03126 [Mycobacterium tuberculosis C] gi|308406078|ref|ZP_07495056.2| conserved secreted protein [Mycobacterium tuberculosis SUMu012] 6 more sequence titles Length=332 Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/332 (100%), Positives = 332/332 (100%), Gaps = 0/332 (0%) Query 9 MVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPTSGHLNMTT 68 MVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPTSGHLNMTT Sbjct 1 MVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPTSGHLNMTT 60 Query 69 VSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALG 128 VSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALG Sbjct 61 VSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALG 120 Query 129 YLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVTIDF 188 YLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVTIDF Sbjct 121 YLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVTIDF 180 Query 189 RRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAGLMFSLAVV 248 RRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAGLMFSLAVV Sbjct 181 RRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAGLMFSLAVV 240 Query 249 DKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKNCYEASSD 308 DKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKNCYEASSD Sbjct 241 DKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKNCYEASSD 300 Query 309 SPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 SPPGLKLVKVETLSQAVDALHAMTSGSPTPSC Sbjct 301 SPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 332 >gi|240169968|ref|ZP_04748627.1| serine protease [Mycobacterium kansasii ATCC 12478] Length=340 Score = 577 bits (1488), Expect = 6e-163, Method: Compositional matrix adjust. Identities = 288/340 (85%), Positives = 316/340 (93%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTLMVALVPIVVFGVLLAVVTVPFV+LGPGPTFDTLGE+DGKQVV I GTQT+PT Sbjct 1 MNRRILTLMVALVPIVVFGVLLAVVTVPFVSLGPGPTFDTLGEVDGKQVVDIEGTQTHPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 SGHLNMTTVSQRDGL+LGEA+ LWLSGQEQL+PRDLVYPPGKSREE++ N ADFK SE Sbjct 61 SGHLNMTTVSQRDGLSLGEAITLWLSGQEQLVPRDLVYPPGKSREEVDKANNADFKNSED 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AEYAALGYLKYP+AVTVASV DPGPS KL+AGDAIDAV+GTPV N++QFT LLKNTKP Sbjct 121 SAEYAALGYLKYPEAVTVASVNDPGPSAGKLKAGDAIDAVNGTPVANIEQFTGLLKNTKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 GQ VTIDFRRKNEP G+AQITLG NKDRD G +G+ V+DAPWAPF VDF+LANVGGPSAG Sbjct 181 GQSVTIDFRRKNEPAGVAQITLGTNKDRDYGFMGVAVLDAPWAPFVVDFNLANVGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAV+DKLT+G LVGSTFVAGTGTI+VDGKVG IGGITHKMAAARAAGATVFLVPAK Sbjct 241 LMFSLAVIDKLTTGDLVGSTFVAGTGTISVDGKVGAIGGITHKMAAARAAGATVFLVPAK 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEA+SD+P GL+LVKVETL QAVDALHAMT+G+PTPSC Sbjct 301 NCYEAASDTPQGLRLVKVETLGQAVDALHAMTAGAPTPSC 340 >gi|118617988|ref|YP_906320.1| serine protease [Mycobacterium ulcerans Agy99] gi|118570098|gb|ABL04849.1| serine protease [Mycobacterium ulcerans Agy99] Length=340 Score = 565 bits (1456), Expect = 3e-159, Method: Compositional matrix adjust. Identities = 282/340 (83%), Positives = 312/340 (92%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTLMVALVPIVVFGVLLAVVTVPFV+LGPGPTFDTLGE+DGKQVVQI GTQT+PT Sbjct 1 MNRRILTLMVALVPIVVFGVLLAVVTVPFVSLGPGPTFDTLGEVDGKQVVQIEGTQTHPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 +GHLNMTTVSQRDGL+LGEAL LWLSGQEQL+PRDLVYPPGKSREE++N N+ADFK SE Sbjct 61 TGHLNMTTVSQRDGLSLGEALTLWLSGQEQLVPRDLVYPPGKSREEVDNANSADFKNSEE 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AEYAAL YLKYP AVTVA+V +PGPS KL+AGDAIDAV+GT V N++QFT++LK+TKP Sbjct 121 SAEYAALEYLKYPDAVTVATVSEPGPSAGKLKAGDAIDAVNGTAVANVEQFTSILKDTKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 G V IDFRRKNE PG+AQITLG NKDRD G +G+ V+DAPWAPF VDFHLANVGGPSAG Sbjct 181 GDVVVIDFRRKNEAPGVAQITLGTNKDRDYGFMGVAVLDAPWAPFVVDFHLANVGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLT+G LVGSTFVAGTGTI DGKVG IGGITHKMAAARAAGA+VFLVPAK Sbjct 241 LMFSLAVVDKLTTGDLVGSTFVAGTGTITADGKVGPIGGITHKMAAARAAGASVFLVPAK 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEA+SD+P GL+LVKVETL QAVDALHAMTSG+ TPSC Sbjct 301 NCYEAASDTPSGLRLVKVETLGQAVDALHAMTSGTATPSC 340 >gi|296169043|ref|ZP_06850705.1| PDZ domain family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896302|gb|EFG75961.1| PDZ domain family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=340 Score = 564 bits (1454), Expect = 6e-159, Method: Compositional matrix adjust. Identities = 273/340 (81%), Positives = 304/340 (90%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTLMVALVPI+VFGVLLAVVTVPFV+LGPGPTFDTLGE+DGKQVV I GT T+PT Sbjct 1 MNRRILTLMVALVPILVFGVLLAVVTVPFVSLGPGPTFDTLGEVDGKQVVAIEGTATHPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 +GHLNMTTVSQRD LTLGEAL LWLSGQEQL+PRDL+YPPGKSR+E++ N ADFK SE Sbjct 61 TGHLNMTTVSQRDELTLGEALTLWLSGQEQLVPRDLIYPPGKSRDEVDKANTADFKESED 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AEYAALGYLKYP AVTVA V DPGPS KL++GDAIDAV+GTPV ++DQFT LLK+TKP Sbjct 121 SAEYAALGYLKYPAAVTVAKVSDPGPSAGKLKSGDAIDAVNGTPVADVDQFTGLLKSTKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 GQ VTID+RRKNEP G+ QITLG NKDRD G LG+ V+ APWAPF VDF+LANVGGPSAG Sbjct 181 GQTVTIDYRRKNEPAGVVQITLGANKDRDYGFLGVAVLTAPWAPFVVDFNLANVGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLT+G L GS F+AGTGTI+ DGKVGQIGGITHKM AA AAGATVFLVPAK Sbjct 241 LMFSLAVVDKLTTGDLTGSKFIAGTGTISADGKVGQIGGITHKMVAAHAAGATVFLVPAK 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEA+SD+P G++LVKVETLSQAVDALHA+TSG PSC Sbjct 301 NCYEANSDNPSGMRLVKVETLSQAVDALHAITSGGQAPSC 340 >gi|254821685|ref|ZP_05226686.1| PDZ domain-containing protein [Mycobacterium intracellulare ATCC 13950] Length=340 Score = 563 bits (1451), Expect = 1e-158, Method: Compositional matrix adjust. Identities = 275/340 (81%), Positives = 303/340 (90%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTLMVALVPIVVFGVLLAVVTVPFV+LGPGPTFDTLGE+DGKQVV I GT T+PT Sbjct 1 MNRRILTLMVALVPIVVFGVLLAVVTVPFVSLGPGPTFDTLGEVDGKQVVAIQGTLTHPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 +GHLNMTTVSQRD LTLGEAL LWLS EQL+PRD++YPPGKSREE++ N+ADFK+SE Sbjct 61 TGHLNMTTVSQRDDLTLGEALTLWLSDTEQLVPRDIIYPPGKSREEVDKANSADFKQSED 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AEYAALGYLKYP AVTVA V +PGPS KL+AGDAIDAV+GTPV +D FT LLKNTKP Sbjct 121 SAEYAALGYLKYPSAVTVAKVPEPGPSAGKLKAGDAIDAVNGTPVATVDAFTGLLKNTKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 GQ VTID+RRKNEP G+AQITLG NKDRD G LG+ V+DAPWAPF VDF+LAN+GGPSAG Sbjct 181 GQTVTIDYRRKNEPAGVAQITLGSNKDRDYGYLGVAVLDAPWAPFVVDFNLANIGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLT+G L GS F+AGTGTI DGKVGQIGGITHKM AA AAGATVFLVPAK Sbjct 241 LMFSLAVVDKLTTGGLAGSNFIAGTGTITADGKVGQIGGITHKMVAAHAAGATVFLVPAK 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEASSD+P GL+LVKVETLSQAVDALHA+TSG PSC Sbjct 301 NCYEASSDNPSGLRLVKVETLSQAVDALHAITSGGQPPSC 340 >gi|183981393|ref|YP_001849684.1| serine protease [Mycobacterium marinum M] gi|183174719|gb|ACC39829.1| serine protease [Mycobacterium marinum M] Length=340 Score = 563 bits (1451), Expect = 1e-158, Method: Compositional matrix adjust. Identities = 280/340 (83%), Positives = 312/340 (92%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTLMVALVPIVVFGVLLAVVTVPFV+LGPGPTFDTLGE+DG+QVVQI GTQT+PT Sbjct 1 MNRRILTLMVALVPIVVFGVLLAVVTVPFVSLGPGPTFDTLGEVDGRQVVQIEGTQTHPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 +GHLNMTTVSQRDGL+LGEAL LWLSGQEQL+PRDLVYPPGKSREE++N N+ADFK SE Sbjct 61 TGHLNMTTVSQRDGLSLGEALTLWLSGQEQLVPRDLVYPPGKSREEVDNANSADFKNSEE 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AEYAAL YLKYP AVTVA+V +PGPS KL+AGDAIDAV+GT V N++QFT++LK+TKP Sbjct 121 SAEYAALEYLKYPDAVTVATVSEPGPSAGKLKAGDAIDAVNGTAVANVEQFTSILKDTKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 G V IDFRRKNE PG+AQITLG NKDRD G +G+ V+DAPWAPF VDFHLANVGGPSAG Sbjct 181 GDVVVIDFRRKNEAPGVAQITLGTNKDRDYGFMGVAVLDAPWAPFVVDFHLANVGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLT+G LVGSTFVAGTGTI DGKVG IGGITHKMAAARAAGA+VFLVPAK Sbjct 241 LMFSLAVVDKLTTGDLVGSTFVAGTGTITADGKVGPIGGITHKMAAARAAGASVFLVPAK 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEA+SD+P GL+LVKVETL QAVDALHAMT+G+ TPSC Sbjct 301 NCYEAASDTPSGLRLVKVETLGQAVDALHAMTAGTATPSC 340 >gi|41409390|ref|NP_962226.1| hypothetical protein MAP3292c [Mycobacterium avium subsp. paratuberculosis K-10] gi|254776575|ref|ZP_05218091.1| PDZ domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] gi|41398221|gb|AAS05842.1| hypothetical protein MAP_3292c [Mycobacterium avium subsp. paratuberculosis K-10] Length=340 Score = 555 bits (1431), Expect = 3e-156, Method: Compositional matrix adjust. Identities = 271/340 (80%), Positives = 302/340 (89%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTLMVALVPIVVFGVLLAVVTVPFV+LGPGPTFDTLGE+DGKQVV I GT T+PT Sbjct 1 MNRRILTLMVALVPIVVFGVLLAVVTVPFVSLGPGPTFDTLGEVDGKQVVAIEGTMTHPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 +GHLNMTTVSQRD LTLGEAL LWLS EQL+PRDL+YPPGKSRE+++ N ADFK+SE Sbjct 61 TGHLNMTTVSQRDDLTLGEALTLWLSDTEQLVPRDLIYPPGKSREDVDKANNADFKQSED 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +A YAALGYLKYP AVTVA V +PGPS KL+ GDAIDAV+GTPV +++FT LLKNTKP Sbjct 121 SAAYAALGYLKYPSAVTVAKVPEPGPSAGKLKVGDAIDAVNGTPVATVEEFTGLLKNTKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 GQ VTID+RRKNEP G+AQITLG NKDRD G LG+ V+DAPWAPF V+F+LANVGGPSAG Sbjct 181 GQTVTIDYRRKNEPAGVAQITLGANKDRDYGFLGVAVLDAPWAPFVVNFNLANVGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLT+G L GS FVAGTGTI+ DGKVGQIGGITHKM AA AAGATVFLVPAK Sbjct 241 LMFSLAVVDKLTTGDLAGSNFVAGTGTISADGKVGQIGGITHKMVAAHAAGATVFLVPAK 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEASSD+P GL+LVKVETL+QAVDALHA+T+G PSC Sbjct 301 NCYEASSDNPSGLRLVKVETLAQAVDALHAITAGGQPPSC 340 >gi|118463477|ref|YP_883286.1| PDZ domain-containing protein [Mycobacterium avium 104] gi|118164764|gb|ABK65661.1| PDZ domain family protein [Mycobacterium avium 104] Length=340 Score = 554 bits (1427), Expect = 1e-155, Method: Compositional matrix adjust. Identities = 270/340 (80%), Positives = 301/340 (89%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTLMVALVPIV FGVLLAVVTVPFV+LGPGPTFDTLGE+DGKQVV I GT T+PT Sbjct 1 MNRRILTLMVALVPIVAFGVLLAVVTVPFVSLGPGPTFDTLGEVDGKQVVAIEGTMTHPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 +GHLNMTTVSQRD LTLGEAL LWLS EQL+PRDL+YPPGKSRE+++ N ADFK+SE Sbjct 61 TGHLNMTTVSQRDDLTLGEALTLWLSDTEQLVPRDLIYPPGKSREDVDKANNADFKQSED 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +A YAALGYLKYP AVTVA V +PGPS KL+ GDAIDAV+GTPV +++FT LLKNTKP Sbjct 121 SAAYAALGYLKYPSAVTVAKVPEPGPSAGKLKVGDAIDAVNGTPVATVEEFTGLLKNTKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 GQ VTID+RRKNEP G+AQITLG NKDRD G LG+ V+DAPWAPF V+F+LANVGGPSAG Sbjct 181 GQTVTIDYRRKNEPAGVAQITLGANKDRDYGFLGVAVLDAPWAPFVVNFNLANVGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLT+G L GS FVAGTGTI+ DGKVGQIGGITHKM AA AAGATVFLVPAK Sbjct 241 LMFSLAVVDKLTTGDLAGSNFVAGTGTISADGKVGQIGGITHKMVAAHAAGATVFLVPAK 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEASSD+P GL+LVKVETL+QAVDALHA+T+G PSC Sbjct 301 NCYEASSDNPSGLRLVKVETLAQAVDALHAITAGGQPPSC 340 >gi|342861147|ref|ZP_08717796.1| PDZ domain-containing protein [Mycobacterium colombiense CECT 3035] gi|342131591|gb|EGT84861.1| PDZ domain-containing protein [Mycobacterium colombiense CECT 3035] Length=340 Score = 550 bits (1418), Expect = 9e-155, Method: Compositional matrix adjust. Identities = 269/340 (80%), Positives = 299/340 (88%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTLMVALVPIV FGVLLAVVTVPFV+LGPGPTFDTLGE+DGKQVV I GTQT+PT Sbjct 1 MNRRILTLMVALVPIVAFGVLLAVVTVPFVSLGPGPTFDTLGEVDGKQVVAIEGTQTHPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 +GHLNMTTVSQRD LTLGEAL LWLS QEQL+PRDL+YPPGKSRE+++ N ADFK+SE Sbjct 61 TGHLNMTTVSQRDDLTLGEALTLWLSDQEQLVPRDLIYPPGKSREDVDKANNADFKQSED 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +A YAALGYLKYP AVTVA V +PGPSV KL+ GDAIDAV+G PV +D+FT LLKNTKP Sbjct 121 SAAYAALGYLKYPAAVTVAKVPEPGPSVGKLKVGDAIDAVNGVPVATVDEFTGLLKNTKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 GQ VTID+RRKNEP G+AQ+TLG NKDRD G LG+ V+DAPWAPF VDF+LANVGGPSAG Sbjct 181 GQVVTIDYRRKNEPAGVAQVTLGANKDRDYGFLGVAVLDAPWAPFTVDFNLANVGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLT+G L S F+AGTGTI+ DGKVGQIGGITHKM AA AAGATVFLVPAK Sbjct 241 LMFSLAVVDKLTTGDLAKSNFIAGTGTISSDGKVGQIGGITHKMVAAHAAGATVFLVPAK 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEASSD+P GL+LVKVETL QAVDALH + +G PSC Sbjct 301 NCYEASSDNPSGLRLVKVETLGQAVDALHTIGAGGQPPSC 340 >gi|15827268|ref|NP_301531.1| hypothetical protein [Mycobacterium leprae TN] gi|221229746|ref|YP_002503162.1| putative secreted protein [Mycobacterium leprae Br4923] gi|13092817|emb|CAC30152.1| putative secreted protein [Mycobacterium leprae] gi|219932853|emb|CAR70737.1| putative secreted protein [Mycobacterium leprae Br4923] Length=340 Score = 545 bits (1404), Expect = 4e-153, Method: Compositional matrix adjust. Identities = 273/340 (81%), Positives = 305/340 (90%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTL+VALVPI+VFGVLLAVVTVPFV+LGPGPTFDTLGE+DGKQVV I G T+PT Sbjct 1 MNRRILTLLVALVPILVFGVLLAVVTVPFVSLGPGPTFDTLGEVDGKQVVAIKGAHTHPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 SGHLNMTTVSQRD LTLGEAL LWLSGQEQL+PRDL+YPPGKSRE+++ N ADFK+SE Sbjct 61 SGHLNMTTVSQRDDLTLGEALTLWLSGQEQLVPRDLIYPPGKSREDVDKVNYADFKQSED 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +A YAALGYL+YP AVTVA V DPG SV KL++GDA+DAV+G+PV N++QFT LLK TKP Sbjct 121 SAAYAALGYLQYPSAVTVAKVTDPGQSVGKLKSGDAVDAVNGSPVANVEQFTGLLKKTKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 G+ VTIDFRRKNEPPG+ QITLG NKDRD G LG+ V+DAPWAPF VDF+LANVGGPSAG Sbjct 181 GEVVTIDFRRKNEPPGVVQITLGANKDRDYGFLGVAVLDAPWAPFVVDFNLANVGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLT+G LVGSTFVAGTGTI++DGKVG IGGI HKMAAARAAGATVFLVPAK Sbjct 241 LMFSLAVVDKLTTGDLVGSTFVAGTGTISIDGKVGPIGGIAHKMAAARAAGATVFLVPAK 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEA SD+ GL+LVKVE+LSQAVDALHAMTSG PSC Sbjct 301 NCYEARSDNRTGLRLVKVESLSQAVDALHAMTSGGQLPSC 340 >gi|336459541|gb|EGO38478.1| putative secreted PDZ domain-containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=332 Score = 540 bits (1390), Expect = 2e-151, Method: Compositional matrix adjust. Identities = 264/332 (80%), Positives = 294/332 (89%), Gaps = 0/332 (0%) Query 9 MVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPTSGHLNMTT 68 MVALVPIVVFGVLLAVVTVPFV+LGPGPTFDTLGE+DGKQVV I GT T+PT+GHLNMTT Sbjct 1 MVALVPIVVFGVLLAVVTVPFVSLGPGPTFDTLGEVDGKQVVAIEGTMTHPTTGHLNMTT 60 Query 69 VSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALG 128 VSQRD LTLGEAL LWLS EQL+PRDL+YPPGKSRE+++ N ADFK+SE +A YAALG Sbjct 61 VSQRDDLTLGEALTLWLSDTEQLVPRDLIYPPGKSREDVDKANNADFKQSEDSAAYAALG 120 Query 129 YLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVTIDF 188 YLKYP AVTVA V +PGPS KL+ GDAIDAV+GTPV +++FT LLKNTKPGQ VTID+ Sbjct 121 YLKYPSAVTVAKVPEPGPSAGKLKVGDAIDAVNGTPVATVEEFTGLLKNTKPGQTVTIDY 180 Query 189 RRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAGLMFSLAVV 248 RRKNEP G+AQITLG NKDRD G LG+ V+DAPWAPF V+F+LANVGGPSAGLMFSLAVV Sbjct 181 RRKNEPAGVAQITLGANKDRDYGFLGVAVLDAPWAPFVVNFNLANVGGPSAGLMFSLAVV 240 Query 249 DKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKNCYEASSD 308 DKLT+G L GS FVAGTGTI+ DGKVGQIGGITHKM AA AAGATVFLVPAKNCYEASSD Sbjct 241 DKLTTGDLAGSNFVAGTGTISADGKVGQIGGITHKMVAAHAAGATVFLVPAKNCYEASSD 300 Query 309 SPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 +P GL+LVKVETL+QAVDALHA+T+G PSC Sbjct 301 NPSGLRLVKVETLAQAVDALHAITAGGQPPSC 332 >gi|333991546|ref|YP_004524160.1| serine protease [Mycobacterium sp. JDM601] gi|333487514|gb|AEF36906.1| serine protease [Mycobacterium sp. JDM601] Length=339 Score = 498 bits (1281), Expect = 8e-139, Method: Compositional matrix adjust. Identities = 244/340 (72%), Positives = 280/340 (83%), Gaps = 1/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTL+ AL+P+VVFG LL VTVPFV+LGPGPTFDTLG +DGKQVV I GT T T Sbjct 1 MNRRILTLLAALLPVVVFGALLTAVTVPFVSLGPGPTFDTLGMVDGKQVVDIQGTPTRTT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 SGHLNMTTVSQRDGLTLGEALALWLSG+EQLMPRDLVYPPGKSREE++ DN A+F+ SE Sbjct 61 SGHLNMTTVSQRDGLTLGEALALWLSGREQLMPRDLVYPPGKSREEVDEDNDAEFRTSEQ 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AEYAALGYL+YP AVT+A V DPGPS LQ GDA+DAVDG PV ++QFT L TKP Sbjct 121 SAEYAALGYLRYPSAVTLAEVHDPGPSAGALQRGDAVDAVDGEPVYTVEQFTKRLSATKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 G V ID+RRKN PG A+ITLG+NKDR G LG+ V+DAPWAPF V+F+LAN+GGPSAG Sbjct 181 GDTVAIDYRRKNAAPGTARITLGENKDRPNGFLGVSVLDAPWAPFTVEFNLANIGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKL +G L G F+AGTG I +G+V IGGITHKM AAR AGATVFLVPA+ Sbjct 241 LMFSLAVVDKLGTGTLAGQNFIAGTGVIKPNGQVDSIGGITHKMIAAREAGATVFLVPAE 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NCYEA SD P GL+L+KV++L+QAVDAL +T G PSC Sbjct 301 NCYEARSD-PNGLQLIKVDSLAQAVDALRTLTGGGQPPSC 339 >gi|108798385|ref|YP_638582.1| PDZ/DHR/GLGF [Mycobacterium sp. MCS] gi|108768804|gb|ABG07526.1| PDZ/DHR/GLGF [Mycobacterium sp. MCS] Length=345 Score = 489 bits (1260), Expect = 2e-136, Method: Compositional matrix adjust. Identities = 241/342 (71%), Positives = 279/342 (82%), Gaps = 2/342 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 VNRRILTL++ALVP+V FGVLL+ VTVPFV+LGPGPTFDTLGE+DGK+VV I GT+ PT Sbjct 4 VNRRILTLLIALVPVVAFGVLLSAVTVPFVSLGPGPTFDTLGEVDGKEVVDITGTEVKPT 63 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 SGHLNMTTVSQRDGLTL +AL LW+SG+EQL+PR+LVYPP KS++EI+ N ADF+ SEA Sbjct 64 SGHLNMTTVSQRDGLTLAQALTLWMSGREQLVPRELVYPPDKSKDEIDEANTADFRNSEA 123 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 AEYAAL YLKYP+AVTV SV DPGPS KL+ GDAIDAV+G PV +D+F ALLK TKP Sbjct 124 NAEYAALSYLKYPRAVTVESVTDPGPSAGKLKEGDAIDAVNGKPVATVDEFQALLKTTKP 183 Query 181 GQEVTIDFRRK--NEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPS 238 G E+ +DFRRK N+P G + LG N DRD G LGI V+DAPWA F +DF+LAN+GGPS Sbjct 184 GDELVLDFRRKDENDPLGTTTVELGTNPDRDYGYLGIGVIDAPWASFKIDFNLANIGGPS 243 Query 239 AGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVP 298 AGLMFSLAVVDKLTSG L FVAGTGTI DG+VG IGGITHKM AR AGATVFLVP Sbjct 244 AGLMFSLAVVDKLTSGDLNDGKFVAGTGTITGDGEVGSIGGITHKMVGARDAGATVFLVP 303 Query 299 AKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 A NC EA SD GL+LVKV TL++AVDAL+A+++G P C Sbjct 304 ADNCAEAKSDPQDGLELVKVGTLTEAVDALNAISAGGEPPRC 345 >gi|119867482|ref|YP_937434.1| PDZ/DHR/GLGF domain-containing protein [Mycobacterium sp. KMS] gi|126434069|ref|YP_001069760.1| PDZ/DHR/GLGF domain-containing protein [Mycobacterium sp. JLS] gi|119693571|gb|ABL90644.1| PDZ/DHR/GLGF domain protein [Mycobacterium sp. KMS] gi|126233869|gb|ABN97269.1| PDZ/DHR/GLGF domain protein [Mycobacterium sp. JLS] Length=342 Score = 488 bits (1257), Expect = 5e-136, Method: Compositional matrix adjust. Identities = 240/342 (71%), Positives = 279/342 (82%), Gaps = 2/342 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRILTL++ALVP+V FGVLL+ VTVPFV+LGPGPTFDTLGE+DGK+VV I GT+ PT Sbjct 1 MNRRILTLLIALVPVVAFGVLLSAVTVPFVSLGPGPTFDTLGEVDGKEVVDITGTEVKPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 SGHLNMTTVSQRDGLTL +AL LW+SG+EQL+PR+LVYPP KS++EI+ N ADF+ SEA Sbjct 61 SGHLNMTTVSQRDGLTLAQALTLWMSGREQLVPRELVYPPDKSKDEIDEANTADFRNSEA 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 AEYAAL YLKYP+AVTV SV DPGPS KL+ GDAIDAV+G PV +D+F ALLK TKP Sbjct 121 NAEYAALSYLKYPRAVTVESVTDPGPSAGKLKEGDAIDAVNGKPVATVDEFQALLKTTKP 180 Query 181 GQEVTIDFRRK--NEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPS 238 G E+ +DFRRK N+P G + LG N DRD G LGI V+DAPWA F +DF+LAN+GGPS Sbjct 181 GDELVLDFRRKDENDPLGTTTVELGTNPDRDYGYLGIGVIDAPWASFKIDFNLANIGGPS 240 Query 239 AGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVP 298 AGLMFSLAVVDKLTSG L FVAGTGTI DG+VG IGGITHKM AR AGATVFLVP Sbjct 241 AGLMFSLAVVDKLTSGDLNDGKFVAGTGTITGDGEVGSIGGITHKMVGARDAGATVFLVP 300 Query 299 AKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 A NC EA SD GL+LVKV TL++AVDAL+A+++G P C Sbjct 301 ADNCAEAKSDPQDGLELVKVGTLTEAVDALNAISAGGEPPRC 342 >gi|118472005|ref|YP_886324.1| PDZ domain-containing protein [Mycobacterium smegmatis str. MC2 155] gi|118173292|gb|ABK74188.1| PDZ domain family protein [Mycobacterium smegmatis str. MC2 155] Length=345 Score = 485 bits (1249), Expect = 3e-135, Method: Compositional matrix adjust. Identities = 243/342 (72%), Positives = 277/342 (81%), Gaps = 2/342 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVG--TQTY 58 VNRRILTL+VALVP+V FGVLL+VV VPFV+LGPGPTF+TLGEIDGKQVV I G + Sbjct 4 VNRRILTLLVALVPVVAFGVLLSVVQVPFVSLGPGPTFNTLGEIDGKQVVDIEGPDATVH 63 Query 59 PTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRS 118 PTSGHLNMTTVSQRDGLTLG+A+ LW+SG+EQL+PRDLVYPP KS++EI+ N ADFK S Sbjct 64 PTSGHLNMTTVSQRDGLTLGQAITLWMSGREQLVPRDLVYPPDKSKDEIDEANTADFKNS 123 Query 119 EAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNT 178 E +AEYAAL +LKYP AVTV +V DPGPS KLQ GDAID V+G PV NLD+F ALLK T Sbjct 124 EDSAEYAALSFLKYPMAVTVQNVTDPGPSAGKLQDGDAIDGVNGKPVANLDEFQALLKET 183 Query 179 KPGQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPS 238 KPG ++ ID+RRKN PPG A ITLG N DRD G LGI V+DAPWAPF ++F+LAN+GGPS Sbjct 184 KPGDKLVIDYRRKNAPPGEATITLGDNPDRDYGYLGIAVLDAPWAPFDIEFNLANIGGPS 243 Query 239 AGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVP 298 AGLMFSLAVVDKLT+G L F+AGTGTI+ DGKVG IGGITHKM AA AGA VFLVP Sbjct 244 AGLMFSLAVVDKLTTGDLNDGKFIAGTGTISGDGKVGSIGGITHKMLAASEAGAEVFLVP 303 Query 299 AKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 A NC EA S GL+LVKVETL AVDAL +++G P C Sbjct 304 ADNCTEARSAPRDGLELVKVETLEGAVDALKTISAGGEPPRC 345 >gi|315445529|ref|YP_004078408.1| secreted protein containing a PDZ domain [Mycobacterium sp. Spyr1] gi|315263832|gb|ADU00574.1| predicted secreted protein containing a PDZ domain [Mycobacterium sp. Spyr1] Length=340 Score = 474 bits (1221), Expect = 7e-132, Method: Compositional matrix adjust. Identities = 227/340 (67%), Positives = 275/340 (81%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRI TL+VAL PI++FG+LL+ VTVP+VALGPGPTFDTLGE+DGK+VV I G + T Sbjct 1 MNRRISTLVVALAPILIFGILLSAVTVPYVALGPGPTFDTLGEVDGKEVVDIEGADVHTT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 SGHLNMTTVSQRDGLTLG+AL W SG++QL+PRDLVYPP K+REEI+ N+ DF++SE Sbjct 61 SGHLNMTTVSQRDGLTLGQALIFWASGRDQLLPRDLVYPPDKTREEIDEANSQDFRQSED 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AEYAAL +LKYP AVTV S+ + GPS KLQ GDAID V+G PV LDQF LLK KP Sbjct 121 SAEYAALHHLKYPMAVTVESIDEEGPSKGKLQGGDAIDGVNGKPVATLDQFQELLKAYKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 G + +D+RRKN P G A+ITLGK+ DRDQG+LG+ V+DAPWAPF +DF+LAN+GGPSAG Sbjct 181 GDTIAVDYRRKNAPMGTAEITLGKHPDRDQGILGVNVLDAPWAPFTIDFNLANIGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLT+G + G FVAG+GTI+ DGKVG IGGITHK+ AA+ AGATVFLVPA Sbjct 241 LMFSLAVVDKLTTGDVTGGKFVAGSGTISGDGKVGSIGGITHKVTAAQEAGATVFLVPAD 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NC EA + G++L+KVETL QAVD L +++G P C Sbjct 301 NCAEARTADADGIELLKVETLEQAVDGLRTLSAGGEPPRC 340 >gi|145225233|ref|YP_001135911.1| PDZ/DHR/GLGF [Mycobacterium gilvum PYR-GCK] gi|145217719|gb|ABP47123.1| PDZ/DHR/GLGF [Mycobacterium gilvum PYR-GCK] Length=340 Score = 474 bits (1220), Expect = 8e-132, Method: Compositional matrix adjust. Identities = 227/340 (67%), Positives = 275/340 (81%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRI TL+VAL PI++FG+LL+ VTVP+VALGPGPTFDTLGE+DGK+VV I G + T Sbjct 1 MNRRISTLVVALAPILIFGILLSAVTVPYVALGPGPTFDTLGEVDGKEVVDIEGADVHAT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 SGHLNMTTVSQRDGLTLG+AL W SG++QL+PRDLVYPP K+REEI+ N+ DF++SE Sbjct 61 SGHLNMTTVSQRDGLTLGQALIFWASGRDQLLPRDLVYPPDKTREEIDEANSQDFRQSED 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AEYAAL +LKYP AVTV S+ + GPS KLQ GDAID V+G PV LDQF LLK KP Sbjct 121 SAEYAALHHLKYPMAVTVESIDEEGPSKGKLQGGDAIDGVNGKPVATLDQFQELLKAYKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 G + +D+RRKN P G A+ITLGK+ DRDQG+LG+ V+DAPWAPF +DF+LAN+GGPSAG Sbjct 181 GDTIAVDYRRKNAPMGTAEITLGKHPDRDQGILGVNVLDAPWAPFTIDFNLANIGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLT+G + G FVAG+GTI+ DGKVG IGGITHK+ AA+ AGATVFLVPA Sbjct 241 LMFSLAVVDKLTTGDVTGGKFVAGSGTISGDGKVGSIGGITHKVTAAQEAGATVFLVPAD 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NC EA + G++L+KVETL QAVD L +++G P C Sbjct 301 NCAEARTADADGIELLKVETLEQAVDGLRTLSAGGEPPRC 340 >gi|120402812|ref|YP_952641.1| PDZ/DHR/GLGF domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119955630|gb|ABM12635.1| PDZ/DHR/GLGF [Mycobacterium vanbaalenii PYR-1] Length=359 Score = 472 bits (1215), Expect = 3e-131, Method: Compositional matrix adjust. Identities = 231/340 (68%), Positives = 273/340 (81%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 VNRRI T++VALVPI+VFGVLL VVTVP+VALGPGPTFDTLGE+DGKQVV I G + T Sbjct 20 VNRRISTMVVALVPILVFGVLLTVVTVPYVALGPGPTFDTLGEVDGKQVVDIEGAHVHKT 79 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 SGHLNMTTVSQRDGLTLG+AL W SG++QL+PR+LVYPP KSREEI+ N DF+ SE Sbjct 80 SGHLNMTTVSQRDGLTLGQALVFWASGRDQLVPRELVYPPDKSREEIDEANTRDFRDSED 139 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AEYAAL YLKYP AVTV S+ + GPS KLQAGDAIDAV+ TPV +L QF LLK+TKP Sbjct 140 SAEYAALQYLKYPMAVTVESIDEKGPSKGKLQAGDAIDAVNNTPVASLAQFQELLKSTKP 199 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 G + +D+RRKN P G +ITLG + DR QGV+G+ V+DAPWAPF +DF+LAN+GGPSAG Sbjct 200 GDTIIVDYRRKNAPMGTTEITLGSHPDRPQGVVGVNVLDAPWAPFTIDFNLANIGGPSAG 259 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAVVDKLT+G + G FVAGTGTI+ DGKVG IGGITHK+ AAR AGAT FLVPA Sbjct 260 LMFSLAVVDKLTTGDVNGGKFVAGTGTISGDGKVGSIGGITHKIVAARDAGATAFLVPAD 319 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NC EA + G++L+KV+TL AVD L +++G P C Sbjct 320 NCAEAKTADADGIELLKVDTLEHAVDGLRTLSAGGEPPRC 359 >gi|169630580|ref|YP_001704229.1| hypothetical protein MAB_3499c [Mycobacterium abscessus ATCC 19977] gi|169242547|emb|CAM63575.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=340 Score = 464 bits (1195), Expect = 7e-129, Method: Compositional matrix adjust. Identities = 225/340 (67%), Positives = 274/340 (81%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRR+ TL+VAL+PIVVFG+L++V+TVPFV+LGPGPTF+TLG+++GK+VV I GT+ P Sbjct 1 MNRRVATLLVALIPIVVFGLLMSVITVPFVSLGPGPTFNTLGQVEGKEVVDIKGTKVDPV 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 SGHLNMTTVSQRDGLTL +AL LW SG EQL+PRD+VYPP +S+++++ +N +FK+SE Sbjct 61 SGHLNMTTVSQRDGLTLADALRLWASGSEQLVPRDVVYPPDRSKDQVDKENDLEFKKSEE 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AE+AALGYLKYP AVTV ++ D GPS KLQ DAI AV+G PV LD+FT LK TKP Sbjct 121 SAEFAALGYLKYPAAVTVLTISDDGPSKGKLQQNDAITAVNGHPVATLDEFTGQLKLTKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 G EV +D++RKN P G +ITLGKN DRD G LG+ VV APWAPF +DF+LAN+GGPSAG Sbjct 181 GDEVMLDYKRKNAPNGTVKITLGKNGDRDYGFLGVGVVQAPWAPFTIDFNLANIGGPSAG 240 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMFSLAV+DKLT G L G FVAGTGTI +GKVG IGGITHKM AA+ AGATVFLVPA Sbjct 241 LMFSLAVIDKLTPGELDGGKFVAGTGTIDAEGKVGPIGGITHKMFAAKDAGATVFLVPAA 300 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NC EA +D GL LVKV TL++AVD L+A+ G PSC Sbjct 301 NCAEAKTDGGQGLTLVKVGTLTEAVDGLNALNRGEQPPSC 340 >gi|111023350|ref|YP_706322.1| hypothetical protein RHA1_ro06387 [Rhodococcus jostii RHA1] gi|110822880|gb|ABG98164.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=351 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 178/340 (53%), Positives = 232/340 (69%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 VNRRI+TL+ AL PIVV G+L V+TVP+VALGPGPTF+TLGE+ G++VV I GT+ T Sbjct 12 VNRRIVTLLAALAPIVVLGILGTVITVPYVALGPGPTFNTLGEVGGEEVVAIEGTEVDDT 71 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 +GHLNMTTV+ RD L + EA LW SG++ ++PR+ VYPP KS++E++ +N ADF++SE Sbjct 72 TGHLNMTTVAVRDDLNVFEAFGLWASGRQGIVPREEVYPPDKSKDEVKQENDADFQQSED 131 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AE AAL +L P + +A V + GPS L+ GD + +VDG PV + + + P Sbjct 132 SAELAALHFLGKPVDLRIAKVGEDGPSQGLLREGDVMVSVDGKPVSTVGGVQEAVADVPP 191 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 EV I RR + + + D +G LGI + P PF +DF+LA+VGGPSAG Sbjct 192 NTEVPIVIRRDGAETTVRVVLGARPDDESKGYLGITPEEIPDVPFTIDFNLADVGGPSAG 251 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMF+LAV+DKL+ G L G FVAGTGTI DG VG IGGI +K+ AA AGA FLVPAK Sbjct 252 LMFTLAVIDKLSPGELNGGKFVAGTGTIDSDGDVGPIGGIKYKLIAAEEAGAETFLVPAK 311 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NC EA +P GL+LVKVE L AVDAL A+ +G+ P C Sbjct 312 NCDEARQGAPDGLRLVKVENLDGAVDALEAINTGADAPHC 351 >gi|226365857|ref|YP_002783640.1| hypothetical protein ROP_64480 [Rhodococcus opacus B4] gi|226244347|dbj|BAH54695.1| hypothetical protein [Rhodococcus opacus B4] Length=351 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 178/340 (53%), Positives = 230/340 (68%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 VNRRI+TL+ AL PIVV G+L V+ VP+VALGPGPTF+TLGE+ G+QVV I GT T Sbjct 12 VNRRIVTLLAALAPIVVLGILGTVIKVPYVALGPGPTFNTLGEVGGEQVVAIEGTDVDDT 71 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 +GHLNMTTV+ RD L + EA LW SG++ ++PR+ VYPP KS++E++ +N ADF++SE Sbjct 72 AGHLNMTTVAVRDDLNVFEAFGLWASGRQGIVPREEVYPPDKSKDEVKQENDADFQQSED 131 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AE AAL +L P + +A V + GPS L+ GD + +VDG PV + + + P Sbjct 132 SAELAALHFLDEPVDLRIAKVGEDGPSQGLLREGDVLVSVDGKPVSTVGGVQEAVADVPP 191 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 EV I RR + + + D +G LGI + P PF +DF+LA+VGGPSAG Sbjct 192 NTEVPIVIRRDGAETTVRVVLGSRPDDEAKGYLGITPEEVPDVPFTIDFNLADVGGPSAG 251 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMF+LAV+DKL+ G L G FVAGTGTI DG VG IGGI +K+ AA AGA FLVPAK Sbjct 252 LMFTLAVIDKLSPGELNGGKFVAGTGTIDSDGDVGPIGGIKYKLIAASEAGAETFLVPAK 311 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NC EA +P GL+LVKVE L AVDAL A+ +G+ P C Sbjct 312 NCDEARQGAPDGLRLVKVENLDGAVDALEAVNTGADAPHC 351 >gi|226305716|ref|YP_002765676.1| hypothetical protein RER_22290 [Rhodococcus erythropolis PR4] gi|226184833|dbj|BAH32937.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=340 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 175/341 (52%), Positives = 230/341 (68%), Gaps = 2/341 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRI+TL+ AL PIVV GV+ +VTVP+VALGPGPTF+TLG++DGK VV I GT+ PT Sbjct 1 MNRRIVTLLAALAPIVVLGVVGTMVTVPYVALGPGPTFNTLGDVDGKPVVDIQGTEVDPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 G+LNMTTVS RDGL + EA LW SG L+PR +YPP KS+EEI+ N ADF++SE Sbjct 61 DGNLNMTTVSVRDGLNIFEAFGLWASGSNGLVPRSEIYPPEKSKEEIQQANTADFQQSED 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AE AAL +L P A+TV+ V GP+ LQ GD + + TPV + + P Sbjct 121 SAELAALHFLGKPVALTVSKVTPDGPAAGALQEGDVLVKIGDTPVTTITGVQDTVGAIAP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDR-DQGVLGIEVVDAPWAPFAVDFHLANVGGPSA 239 G + + R+ + +T+G ++ + G LG+ + P PF V F+LA++GGPSA Sbjct 181 GTAIDVTVLREGVET-VVPVTVGARPNKPESGYLGVTPNEVPDVPFTVQFNLADIGGPSA 239 Query 240 GLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPA 299 GLMF+LA+VDKLT G L G FVAGTGTI DG+VG IGGI +K+ AA AGA FLVPA Sbjct 240 GLMFTLALVDKLTPGELNGGKFVAGTGTIDSDGEVGPIGGIRYKLIAASEAGAETFLVPA 299 Query 300 KNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 +NC EA ++P GL+LVKV+ L AVD+L ++ +G P C Sbjct 300 QNCDEAKQNAPDGLRLVKVDNLPGAVDSLESLNTGGDAPRC 340 >gi|229491009|ref|ZP_04384842.1| PDZ domain protein [Rhodococcus erythropolis SK121] gi|229322125|gb|EEN87913.1| PDZ domain protein [Rhodococcus erythropolis SK121] Length=335 Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 171/336 (51%), Positives = 225/336 (67%), Gaps = 2/336 (0%) Query 6 LTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPTSGHLN 65 +TL+ AL PIVV GV+ +VTVP+VALGPGPTF+TLG++DGK VV I GT+ PT G+LN Sbjct 1 MTLLAALAPIVVLGVVGTMVTVPYVALGPGPTFNTLGDVDGKPVVDIQGTEVDPTDGNLN 60 Query 66 MTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYA 125 MTTVS RDGL + EA LW SG L+PR +YPP KS+EEI+ N ADF++SE +AE A Sbjct 61 MTTVSVRDGLNIFEAFGLWASGSNGLVPRSEIYPPEKSKEEIQQANTADFQQSEDSAELA 120 Query 126 ALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVT 185 AL +L P A+TV+ V GP+ LQ GD + + TPV + + PG + Sbjct 121 ALHFLGKPVALTVSKVTPDGPAAGALQEGDVLVKIGDTPVTTITGVQDTVGAIAPGTAID 180 Query 186 IDFRRKNEPPGIAQITLGKNKDR-DQGVLGIEVVDAPWAPFAVDFHLANVGGPSAGLMFS 244 + R+ + +T+G ++ + G LG+ + P PF V F+LA++GGPSAGLMF+ Sbjct 181 VTVLREGVET-VVPVTVGARPNKPESGYLGVTPSEVPDVPFTVQFNLADIGGPSAGLMFT 239 Query 245 LAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKNCYE 304 LA+VDKLT G L G FVAGTGTI DG+VG IGGI +K+ AA AGA FLVPA+NC E Sbjct 240 LALVDKLTPGELNGGKFVAGTGTIDSDGEVGPIGGIRYKLIAASEAGAETFLVPAQNCDE 299 Query 305 ASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 A ++P GL+LVKV+ L AVD+L ++ +G P C Sbjct 300 AKQNAPDGLRLVKVDNLPGAVDSLESLNTGGDAPRC 335 >gi|54026501|ref|YP_120743.1| hypothetical protein nfa45280 [Nocardia farcinica IFM 10152] gi|54018009|dbj|BAD59379.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=334 Score = 321 bits (823), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 173/318 (55%), Positives = 211/318 (67%), Gaps = 2/318 (0%) Query 24 VVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPTSGHLNMTTVSQRDGLTLGEALAL 83 V TVPFVALGPGPTFDTLGE DGKQVV++ G + PT+GHLNMTTVS RDGL L EA Sbjct 17 VFTVPFVALGPGPTFDTLGEFDGKQVVEVSGAELDPTTGHLNMTTVSVRDGLNLFEAFGF 76 Query 84 WLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALGYLKYPKAVTVASVMD 143 W SG+ ++PR VYPPG REEI+ N +FK SE AAE AAL YL+ P V V V + Sbjct 77 WASGRHGIVPRAEVYPPGVPREEIDRSNEQEFKDSEGAAEVAALHYLRLPTVVLVRQVGE 136 Query 144 PGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVTIDFRRKNEPPGIAQITL- 202 GP+ D L+ GD +++G PV + + + PG +T+ FRR N A +TL Sbjct 137 EGPAKDVLRPGDEFVSINGAPVTSPQDVVNAVSSQPPGAPLTVVFRRDNAEQ-TATVTLA 195 Query 203 GKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAGLMFSLAVVDKLTSGHLVGSTFV 262 + D +G LG+ + P V F+LA++GGPSAGLMFSLA++DKL+ G L G F+ Sbjct 196 ARPDDASKGFLGVTPGEGARPPMDVTFNLADIGGPSAGLMFSLALIDKLSPGELGGGKFI 255 Query 263 AGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKNCYEASSDSPPGLKLVKVETLS 322 AGTGTI DGKVG IGGI +KM AAR AGA FLVPA NC EA P GL+LVKVETL Sbjct 256 AGTGTIEQDGKVGPIGGIQYKMMAAREAGAEAFLVPAANCNEARQRIPDGLRLVKVETLD 315 Query 323 QAVDALHAMTSGSPTPSC 340 AV +L A+ SG TP+C Sbjct 316 GAVQSLAALGSGGETPTC 333 >gi|312140606|ref|YP_004007942.1| hypothetical protein REQ_32640 [Rhodococcus equi 103S] gi|311889945|emb|CBH49262.1| putative secreted protein [Rhodococcus equi 103S] Length=348 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 178/349 (52%), Positives = 225/349 (65%), Gaps = 14/349 (4%) Query 5 ILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEID--------GKQVVQIVGTQ 56 ++TL+ L P++ GVL V VPFVALGPGPTF+TLGE D K VV+I GT Sbjct 1 MVTLLATLAPVLALGVLGTTVKVPFVALGPGPTFNTLGETDVEENGEIVRKPVVEIDGTA 60 Query 57 TYPTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFK 116 TSG+LNMTTV+ R+ L+L +AL LW+SG++ L+PR+ VYPP KS+EE++ +N+A F Sbjct 61 VDATSGNLNMTTVAVRNNLSLFDALGLWVSGRQGLVPREDVYPPQKSQEEVKEENSAQFA 120 Query 117 RSEAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLK 176 +SE +AE AAL YL P AV + +V + GP+ L+ GD + V TPV + D+ + Sbjct 121 KSENSAELAALRYLNLPVAVEIRTVAEGGPAAGVLREGDRVLRVGSTPVDSADELQDAVG 180 Query 177 NTKPGQEVTIDFRRKNEPPGIAQITLGKN-----KDRDQGVLGIEVVDAPWAPFAVDFHL 231 G V I F R A +TLG D + G LG+ P PF +DF+L Sbjct 181 AAGAGSTVDITFVRDGVET-TAPVTLGSRPHSDGDDSNPGYLGVGAGTVPEVPFTIDFNL 239 Query 232 ANVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAG 291 A++GGPSAGLMFSLAVVDKL+ G L G FVAGTGTI G VG IGGI +KM AA+ AG Sbjct 240 ADIGGPSAGLMFSLAVVDKLSPGELNGGDFVAGTGTIDPAGDVGPIGGIPYKMIAAKEAG 299 Query 292 ATVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 AT FLVPAKNC EA ++ P GL LVKVETL A+DAL + G P PSC Sbjct 300 ATTFLVPAKNCDEAVANRPDGLDLVKVETLGGAIDALADINEGRPAPSC 348 >gi|325675767|ref|ZP_08155451.1| PDZ domain family protein [Rhodococcus equi ATCC 33707] gi|325553738|gb|EGD23416.1| PDZ domain family protein [Rhodococcus equi ATCC 33707] Length=348 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 176/348 (51%), Positives = 223/348 (65%), Gaps = 12/348 (3%) Query 5 ILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEID--------GKQVVQIVGTQ 56 ++TL+ L P++ GVL V VPFVALGPGPTF+TLGE D K VV+I GT Sbjct 1 MVTLLATLAPVLALGVLGTTVKVPFVALGPGPTFNTLGETDVEENGEIVRKPVVEIDGTA 60 Query 57 TYPTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFK 116 TSG+LNMTTV+ R+ LTL +AL LW+SG++ L+PR+ VYPP KS+EE++ +N+A F Sbjct 61 VDATSGNLNMTTVAVRNNLTLFDALGLWVSGRQGLVPREDVYPPQKSQEEVKEENSAQFA 120 Query 117 RSEAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLK 176 +SE +AE AAL +L P AV + +V + GP+ L+ GD + V TPV + D+ + Sbjct 121 KSENSAELAALRHLNLPVAVEIRTVAEGGPAAGVLREGDRVLRVGSTPVDSADELQDAVG 180 Query 177 NTKPGQEVTIDFRRK----NEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLA 232 G V I F R P + G D + G LG+ P PF +DF+LA Sbjct 181 AAGAGSTVDITFVRDGVETTAPVTLGSRPHGDGDDSNPGYLGVGAGTVPEVPFTIDFNLA 240 Query 233 NVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGA 292 ++GGPSAGLMFSLAVVDKL+ G L G FVAGTGTI G VG IGGI +KM AA+ AGA Sbjct 241 DIGGPSAGLMFSLAVVDKLSPGELNGGAFVAGTGTIDPAGDVGPIGGIPYKMIAAKEAGA 300 Query 293 TVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 T FLVPAKNC EA ++ P GL LVKVETL A+DAL + G P PSC Sbjct 301 TTFLVPAKNCDEAVANRPDGLDLVKVETLGGAIDALADINEGRPAPSC 348 >gi|333921394|ref|YP_004494975.1| hypothetical protein AS9A_3737 [Amycolicicoccus subflavus DQS3-9A1] gi|333483615|gb|AEF42175.1| hypothetical protein AS9A_3737 [Amycolicicoccus subflavus DQS3-9A1] Length=340 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 165/341 (49%), Positives = 222/341 (66%), Gaps = 2/341 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 +NRRI+TL+ ALVPIV+FG L A + VP+ A+GPGPT++TLG + G+ +++I G + Sbjct 1 MNRRIVTLIAALVPIVIFGSLGANMKVPYAAVGPGPTYNTLGTLSGRDIIEISGIEPEDF 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 G+LNMTTV+ R L+L +AL W+ G+ L+P D V PPG++ EE+ N DF++SE Sbjct 61 GGNLNMTTVAVRSELSLFDALGFWIGGRNGLVPLDEVIPPGRTNEEVRELNRLDFEQSER 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 AE AAL +L++P V VA V + PS L+ GD I VD V + A L +P Sbjct 121 QAERAALRHLEFPLVVEVAEVSETSPSARFLEPGDVITRVDDVEVFSAADVPAQLDGLRP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKN-KDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSA 239 G V + F R E G I LG + D D+G+LGI VVD P F VDF++ VGGPSA Sbjct 181 GDSVEVTFTRDGE-AGTVTIVLGSHPDDEDRGILGIAVVDEPQKDFQVDFNVEQVGGPSA 239 Query 240 GLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPA 299 GLM +LA++DKLT G L G F+AGTGTI +G VG IGGI +K+ AA+ GA+ FLVP Sbjct 240 GLMLALALIDKLTPGELTGGRFIAGTGTIDAEGAVGPIGGIRYKLVAAQEEGASEFLVPG 299 Query 300 KNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NC EA + +P GL LV+V+TL AV AL ++T+G P+C Sbjct 300 GNCREALTFAPDGLTLVRVDTLDDAVSALTSITTGEEAPTC 340 >gi|134097696|ref|YP_001103357.1| PDZ/DHR/GLGF [Saccharopolyspora erythraea NRRL 2338] gi|133910319|emb|CAM00432.1| PDZ/DHR/GLGF [Saccharopolyspora erythraea NRRL 2338] Length=333 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 161/333 (49%), Positives = 209/333 (63%), Gaps = 1/333 (0%) Query 9 MVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPTSGHLNMTT 68 M +++ +VVFG+L A V VPFVALGPGPT+DTLG V++I G QTYPT GHLNMTT Sbjct 1 MTSVLLVVVFGMLGAFVQVPFVALGPGPTYDTLGTEGDTPVIRIDGQQTYPTGGHLNMTT 60 Query 69 VSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALG 128 V+ D L+L AL LW+SG+ L PR++ +PP KS ++IE +N F S+ AE AAL Sbjct 61 VTVTDQLSLFGALGLWVSGRYALAPREVYFPPDKSEQQIEQENTKAFNDSQTTAETAALR 120 Query 129 YLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVTIDF 188 YL YP V ++ P+ ++ GD + + +G PV + L +PG V I F Sbjct 121 YLGYPTKVLAGEIVKGSPADGVIEPGDRLISANGRPVTDAASLREALAANRPGDRVEIRF 180 Query 189 RRKNEPPGIAQITLGKNKDRD-QGVLGIEVVDAPWAPFAVDFHLANVGGPSAGLMFSLAV 247 R +EP A + LG++ + QG LG+ + P PF ++ LA+VGGPSAGLMFSLA+ Sbjct 181 RHADEPERAATVQLGQHPHGEPQGFLGVAATERPDVPFGIEISLADVGGPSAGLMFSLAI 240 Query 248 VDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKNCYEASS 307 +DKLT G + G FVAGTG I G VG IGGI KM AR AGAT FLVPA NC EA + Sbjct 241 IDKLTPGEINGGQFVAGTGEIDPAGTVGAIGGIPFKMVKAREAGATTFLVPAGNCAEAKA 300 Query 308 DSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 +P GL+L KV TL +A AL A+ +G C Sbjct 301 QAPAGLRLAKVATLDEANKALEALRNGQVPAGC 333 >gi|257054824|ref|YP_003132656.1| putative secreted protein containing a PDZ domain-containing protein [Saccharomonospora viridis DSM 43017] gi|256584696|gb|ACU95829.1| predicted secreted protein containing a PDZ domain protein [Saccharomonospora viridis DSM 43017] Length=381 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 158/340 (47%), Positives = 217/340 (64%), Gaps = 0/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 ++RR T++ + V ++ F +L A V VP+VALGPGPT+DTLG +DG +V+ + GT+TY T Sbjct 40 LSRRGWTMLASGVLVLTFALLGAFVRVPYVALGPGPTYDTLGAVDGTEVISVDGTRTYET 99 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 G L MTTVS D +TL AL +WLSG+ L PR+ + PG+S EE+ +N F+ S++ Sbjct 100 DGELRMTTVSLNDNMTLFGALGMWLSGRYALAPREEYFLPGQSDEEVRQENLRQFRSSQS 159 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 AE AAL L YP V V V+D P+ + LQ GD I +DG V + + +L T+P Sbjct 160 NAEVAALRRLGYPVQVVVEQVVDDSPAAEVLQPGDRIVRIDGKDVTDSESVRKVLSGTRP 219 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 GQ VT+ F+R +TL ++ + G +GI+ D APF VD L +VGGPSAG Sbjct 220 GQTVTVVFQRDGGSERTESVTLARHPESPHGFIGIQPADRADAPFEVDIALEDVGGPSAG 279 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMF+LA++D+LT G + G +AGTGTI +G VG+IGGI+ K+ AA AGA FLVP Sbjct 280 LMFALAILDELTPGAMTGGQSIAGTGTIDAEGNVGEIGGISFKLVAAHEAGADAFLVPEG 339 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NC EA + +P GL LV+V TL AV A+ ++ G PSC Sbjct 340 NCGEAVAAAPEGLTLVRVATLDDAVSAVESLAEGKSAPSC 379 >gi|291006344|ref|ZP_06564317.1| PDZ/DHR/GLGF [Saccharopolyspora erythraea NRRL 2338] Length=330 Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 160/327 (49%), Positives = 205/327 (63%), Gaps = 1/327 (0%) Query 15 IVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPTSGHLNMTTVSQRDG 74 +VVFG+L A V VPFVALGPGPT+DTLG V++I G QTYPT GHLNMTTV+ D Sbjct 4 VVVFGMLGAFVQVPFVALGPGPTYDTLGTEGDTPVIRIDGQQTYPTGGHLNMTTVTVTDQ 63 Query 75 LTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALGYLKYPK 134 L+L AL LW+SG+ L PR++ +PP KS ++IE +N F S+ AE AAL YL YP Sbjct 64 LSLFGALGLWVSGRYALAPREVYFPPDKSEQQIEQENTKAFNDSQTTAETAALRYLGYPT 123 Query 135 AVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVTIDFRRKNEP 194 V ++ P+ ++ GD + + +G PV + L +PG V I FR +EP Sbjct 124 KVLAGEIVKGSPADGVIEPGDRLISANGRPVTDAASLREALAANRPGDRVEIRFRHADEP 183 Query 195 PGIAQITLGKNKDRD-QGVLGIEVVDAPWAPFAVDFHLANVGGPSAGLMFSLAVVDKLTS 253 A + LG++ + QG LG+ + P PF ++ LA+VGGPSAGLMFSLA++DKLT Sbjct 184 ERAATVQLGQHPHGEPQGFLGVAATERPDVPFGIEISLADVGGPSAGLMFSLAIIDKLTP 243 Query 254 GHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKNCYEASSDSPPGL 313 G + G FVAGTG I G VG IGGI KM AR AGAT FLVPA NC EA + +P GL Sbjct 244 GEINGGQFVAGTGEIDPAGTVGAIGGIPFKMVKAREAGATTFLVPAGNCAEAKAQAPAGL 303 Query 314 KLVKVETLSQAVDALHAMTSGSPTPSC 340 +L KV TL +A AL A+ +G C Sbjct 304 RLAKVATLDEANKALEALRNGQVPAGC 330 >gi|145294946|ref|YP_001137767.1| hypothetical protein cgR_0892 [Corynebacterium glutamicum R] gi|140844866|dbj|BAF53865.1| hypothetical protein [Corynebacterium glutamicum R] gi|344043716|gb|EGV39404.1| PDZ domain-containing protein [Corynebacterium glutamicum S9114] Length=350 Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 154/350 (44%), Positives = 218/350 (63%), Gaps = 11/350 (3%) Query 1 VNRRILTLMVALVPIVVFGVLLAV---------VTVPFVALGPGPTFDTLGEIDGKQVVQ 51 +NRRI TL +P+V+ L+++ ++VP+ A GPGPT +TLG++DG+ VV Sbjct 1 MNRRIKTLTWGAIPLVLLASLVSIDHIPGTNINLSVPYAAEGPGPTINTLGQVDGEDVVS 60 Query 52 IVGTQTYPTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDN 111 I G T G+LNMTTVS R G+TL + ++ WL + ++P + V+PPG+S EE+E N Sbjct 61 ISGADLDETEGNLNMTTVSVRSGMTLSQVISRWLFTDDTIVPIEQVFPPGQSTEEVEESN 120 Query 112 AADFKRSEAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQF 171 F SE++A AA+ YL P V VA V+ + + GD + ++DGTP+ Sbjct 121 RTAFISSESSATIAAMKYLNIPVEVEVAEVLTDSAATGIFEPGDKLLSIDGTPISTPGDA 180 Query 172 TALLKNTKPGQEVTIDFRRKNEPPGIAQITLGKNKDRDQ-GVLGIEVVDAPWAPFAVDFH 230 ++++ PG E+TI + R N+ A ITL ++ D +LGI ++ P + VD++ Sbjct 181 QTIVRSKAPGDEITISYER-NDAESQATITLREHPDDSSVALLGISMLSVPSSAIEVDYN 239 Query 231 LANVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAA 290 L ++GGPSAG+MFSLAVVDKL+ G L G FVAGTGTIA DG VG IGGI HK+ AA A Sbjct 240 LEDIGGPSAGMMFSLAVVDKLSPGALNGGKFVAGTGTIAEDGSVGPIGGIAHKVRAAEDA 299 Query 291 GATVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 GA VFL PA NC EA S P + ++KV++LSQA+D + A GS +C Sbjct 300 GAEVFLSPADNCAEAMSAKPQDMTILKVDSLSQAIDQMAAYNEGSDFQTC 349 >gi|256375084|ref|YP_003098744.1| PDZ/DHR/GLGF domain-containing protein [Actinosynnema mirum DSM 43827] gi|255919387|gb|ACU34898.1| PDZ/DHR/GLGF domain protein [Actinosynnema mirum DSM 43827] Length=386 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 161/340 (48%), Positives = 217/340 (64%), Gaps = 1/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 + RR TL+++LV ++V G+L VP+VALGPGPT+DTLGE G+QVV + G +T+PT Sbjct 48 LTRRTWTLVISLVLVLVLGLLGGFARVPYVALGPGPTYDTLGEAGGRQVVSVDGQETFPT 107 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 G L MTTVS D ++L AL LWLSG+ L PR+ + PG+S +++ ++N FK S++ Sbjct 108 GGTLTMTTVSLTDDVSLFGALGLWLSGRYALAPREEFFRPGESEQQVRDENTRAFKDSQS 167 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AE AAL YL YPK V VA + P+ LQ D + V+G + DQ L++TKP Sbjct 168 SAEVAALSYLGYPKKVLVAEITKGTPADVALQPDDQLVEVNGRQITAADQVRPALESTKP 227 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 G +V + R E A++TL + DR+ G LG+ D PF V L++VGGPSAG Sbjct 228 GDQVDLVVLRDGERK-TARVTLAQAGDRETGFLGMVPADRADVPFDVTISLSDVGGPSAG 286 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMF+L++VDKLT G L G VAGTG I G+VG+IGGI KM AAR GA FLVP Sbjct 287 LMFALSIVDKLTPGELNGGKHVAGTGEITQTGEVGRIGGIPFKMVAAREGGAEAFLVPDG 346 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NC EA ++P GL+L++V+ L AV +L A+ G TP C Sbjct 347 NCEEARQNAPDGLRLIRVKNLQDAVTSLEALAKGGDTPGC 386 >gi|19552009|ref|NP_600011.1| hypothetical protein NCgl0749 [Corynebacterium glutamicum ATCC 13032] gi|62389672|ref|YP_225074.1| PDZ domain-containing protein [Corynebacterium glutamicum ATCC 13032] gi|21323549|dbj|BAB98176.1| Predicted secreted protein containing a PDZ domain [Corynebacterium glutamicum ATCC 13032] gi|41325007|emb|CAF19488.1| secreted protein containing a PDZ domain [Corynebacterium glutamicum ATCC 13032] Length=350 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 152/350 (44%), Positives = 216/350 (62%), Gaps = 11/350 (3%) Query 1 VNRRILTLMVALVPIVVFGVLLAV---------VTVPFVALGPGPTFDTLGEIDGKQVVQ 51 +NRRI TL +P+V+ L+++ ++VP+ A GPGPT +TLG++DG+ VV Sbjct 1 MNRRIKTLTWGAIPLVLLASLVSIDHIPGTNINLSVPYAAEGPGPTINTLGQVDGEDVVS 60 Query 52 IVGTQTYPTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDN 111 I T G+LNMTTVS R G+TL + ++ WL + ++P + V+PPG+S EE+E N Sbjct 61 ISSADLDETEGNLNMTTVSVRSGMTLSQVISRWLFTDDTIVPIEQVFPPGQSTEEVEESN 120 Query 112 AADFKRSEAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQF 171 F SE++A AA+ YL P V VA V+ + + GD + ++DGT + Sbjct 121 RTAFISSESSATIAAMNYLNIPVEVEVAEVLTDSAATGIFEPGDKLLSIDGTAISTPGDA 180 Query 172 TALLKNTKPGQEVTIDFRRKNEPPGIAQITLGKNKDRDQ-GVLGIEVVDAPWAPFAVDFH 230 ++++ PG E+TI + R N+ A ITL ++ D +LGI ++ P + VD++ Sbjct 181 QTIVRSKAPGDEITISYER-NDAESQATITLREHPDDSSVALLGISMLSVPSSAIEVDYN 239 Query 231 LANVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAA 290 L ++GGPSAG+MFSLAVVDKL+ G L G FVAGTGTIA DG VG IGGI HK+ AA A Sbjct 240 LEDIGGPSAGMMFSLAVVDKLSPGALNGGKFVAGTGTIAEDGSVGPIGGIAHKVRAAEDA 299 Query 291 GATVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 GA VFL PA NC EA S P + ++KV++LSQA+D + A GS +C Sbjct 300 GAEVFLSPADNCAEAMSAKPQDMTILKVDSLSQAIDQMAAYNEGSDFQTC 349 >gi|25027355|ref|NP_737409.1| hypothetical protein CE0799 [Corynebacterium efficiens YS-314] gi|23492636|dbj|BAC17609.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=353 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 155/350 (45%), Positives = 217/350 (62%), Gaps = 11/350 (3%) Query 1 VNRRILTLMVALVPIVVFGVLLAV---------VTVPFVALGPGPTFDTLGEIDGKQVVQ 51 VNRRI TL +P+V L+++ +TVP+ A GPGPTF+TLGE+DG +VV+ Sbjct 4 VNRRIKTLAWGAIPLVALASLVSIDHIPGTDISLTVPYAAEGPGPTFNTLGEVDGVEVVE 63 Query 52 IVGTQTYPTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDN 111 I GT+T G+LNMTTVS R G+TL +AL+ WL + ++P + ++PPG+S EEI N Sbjct 64 ITGTETDEVEGNLNMTTVSVRTGMTLSQALSRWLFTDDTIVPIEQIFPPGRSPEEIRESN 123 Query 112 AADFKRSEAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQF 171 F SEA+A AA+ +L P + V V++ + L+ GDA+ +V+GT V + Sbjct 124 TMAFAASEASATIAAMNFLNLPVEIEVYDVVEDSAAAGILEPGDAVSSVNGTAVTTPGEV 183 Query 172 TALLKNTKPGQEVTIDFRRKNEPPGIAQITLGKN-KDRDQGVLGIEVVDAPWAPFAVDFH 230 L++ PG EVTI +RR E A + LG + +D +LGI + P + V ++ Sbjct 184 QELIRGMAPGDEVTITYRRGGEEK-TATVPLGAHPQDDSVPLLGISMTSVPVSDTEVTYN 242 Query 231 LANVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAA 290 L ++GGPSAGLMFSLAVVDKL+ G L G FVAG+GTIA DG VG IGGITHK+ AA A Sbjct 243 LEDIGGPSAGLMFSLAVVDKLSPGPLNGGRFVAGSGTIAEDGSVGPIGGITHKVRAAEEA 302 Query 291 GATVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 GA +FL P NC EA + + +++V+TL A++ + A SG +C Sbjct 303 GAEIFLAPTANCAEAVTADYGDMTILQVDTLEHAIEQMDAYNSGGGYQTC 352 >gi|259506506|ref|ZP_05749408.1| PDZ domain family protein [Corynebacterium efficiens YS-314] gi|259165926|gb|EEW50480.1| PDZ domain family protein [Corynebacterium efficiens YS-314] Length=350 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 154/350 (44%), Positives = 217/350 (62%), Gaps = 11/350 (3%) Query 1 VNRRILTLMVALVPIVVFGVLLAV---------VTVPFVALGPGPTFDTLGEIDGKQVVQ 51 +NRRI TL +P+V L+++ +TVP+ A GPGPTF+TLGE+DG +VV+ Sbjct 1 MNRRIKTLAWGAIPLVALASLVSIDHIPGTDISLTVPYAAEGPGPTFNTLGEVDGVEVVE 60 Query 52 IVGTQTYPTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDN 111 I GT+T G+LNMTTVS R G+TL +AL+ WL + ++P + ++PPG+S EEI N Sbjct 61 ITGTETDEVEGNLNMTTVSVRTGMTLSQALSRWLFTDDTIVPIEQIFPPGRSPEEIRESN 120 Query 112 AADFKRSEAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQF 171 F SEA+A AA+ +L P + V V++ + L+ GDA+ +V+GT V + Sbjct 121 TMAFAASEASATIAAMNFLNLPVEIEVYDVVEDSAAAGILEPGDAVSSVNGTAVTTPGEV 180 Query 172 TALLKNTKPGQEVTIDFRRKNEPPGIAQITLGKN-KDRDQGVLGIEVVDAPWAPFAVDFH 230 L++ PG EVTI +RR E A + LG + +D +LGI + P + V ++ Sbjct 181 QELIRGMAPGDEVTITYRRGGEEK-TATVPLGAHPQDDSVPLLGISMTSVPVSDTEVTYN 239 Query 231 LANVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAA 290 L ++GGPSAGLMFSLAVVDKL+ G L G FVAG+GTIA DG VG IGGITHK+ AA A Sbjct 240 LEDIGGPSAGLMFSLAVVDKLSPGPLNGGRFVAGSGTIAEDGSVGPIGGITHKVRAAEEA 299 Query 291 GATVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 GA +FL P NC EA + + +++V+TL A++ + A SG +C Sbjct 300 GAEIFLAPTANCAEAVTADYGDMTILQVDTLEHAIEQMDAYNSGGGYQTC 349 >gi|227505544|ref|ZP_03935593.1| S16 family peptidase [Corynebacterium striatum ATCC 6940] gi|227197841|gb|EEI77889.1| S16 family peptidase [Corynebacterium striatum ATCC 6940] Length=367 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 152/349 (44%), Positives = 207/349 (60%), Gaps = 11/349 (3%) Query 2 NRRILTLMVALVPIVVFGVLLAV---------VTVPFVALGPGPTFDTLGEIDGKQVVQI 52 NRR+ TL +P+VV G L++ +TVP+ A GPGPT DTL E+DG +VV + Sbjct 19 NRRLRTLAWGAIPVVVLGAALSIDHIPGTDVALTVPYAAEGPGPTVDTLSEVDGTKVVDV 78 Query 53 VGTQTYPTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNA 112 +TY TSG LNMTTVS R +TL +AL W+ + L+P D V P GK+ EE+ N Sbjct 79 TAPKTYETSGQLNMTTVSVRTNMTLAQALGRWIMTDDTLVPIDTVIPQGKTDEEVNESNK 138 Query 113 ADFKRSEAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFT 172 F +SEAAA AA+ YLK P + VA V+ P+ ++A D I +VDG V Q Sbjct 139 QAFTQSEAAATVAAMNYLKVPVKIVVAQVLKDAPATGVVKAEDIITSVDGKDVSEPGQVQ 198 Query 173 ALLKNTKPGQEVTIDFRRKNEPPGIAQITLGKNKDRDQ-GVLGIEVVDAPWAPFAVDFHL 231 L++ KPG + + RK + +ITLG + D D +LGI + P V ++L Sbjct 199 ELVRAKKPGDRMELGIERKGKKL-TEEITLGSHPDDDSVALLGISMTSQPKEDIKVQYNL 257 Query 232 ANVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAG 291 ++GGPSAG+MF+LAV+DKL+ G L G FVAGTGTI DG VG IGGI HK+ A++ AG Sbjct 258 QDIGGPSAGMMFTLAVIDKLSEGELNGGKFVAGTGTINEDGTVGPIGGIVHKVEASKQAG 317 Query 292 ATVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 A +FL PA NC EA+S + + KVE++ A+ A+ G +C Sbjct 318 AELFLAPADNCAEATSRDTGDMVVAKVESIDDAIVAMDNFAHGKKVETC 366 >gi|227832534|ref|YP_002834241.1| hypothetical protein cauri_0706 [Corynebacterium aurimucosum ATCC 700975] gi|262183598|ref|ZP_06043019.1| hypothetical protein CaurA7_06371 [Corynebacterium aurimucosum ATCC 700975] gi|227453550|gb|ACP32303.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975] Length=358 Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 150/348 (44%), Positives = 213/348 (62%), Gaps = 11/348 (3%) Query 3 RRILTLMVALVPIVVFGVLLAV---------VTVPFVALGPGPTFDTLGEIDGKQVVQIV 53 RR+ TL +P+V+ G LL++ ++VP+ A GPGPT DTLGE++GK VV + Sbjct 10 RRLSTLTWGAIPVVLTGALLSIDHIPGTDITLSVPYAAEGPGPTLDTLGEVEGKPVVNVE 69 Query 54 GTQTYPTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAA 113 +T+ GHLNMTTVS R +TL +AL LWL + ++P + + P GK+ +E++ N Sbjct 70 APETFQPKGHLNMTTVSVRTNMTLAQALGLWLFTDDTIVPIENIIPQGKTDKEVQEANQQ 129 Query 114 DFKRSEAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTA 173 F +SE+AA AA+ YL P + VA V+D GP+ L D I V+G V Q Sbjct 130 AFTQSESAATVAAMDYLDKPVRIEVAQVLDDGPAAGALDDADIITTVNGDKVTEPGQVQE 189 Query 174 LLKNTKPGQEVTIDFRRKNEPPGIAQITLGKNKDR-DQGVLGIEVVDAPWAPFAVDFHLA 232 ++ +PG EV + RK E + ++TLG + ++ D +LGI + P VD++L Sbjct 190 KIQALQPGDEVELGIVRKGEEKTV-RVTLGSHPEQGDMALLGILMTSVPTEDITVDYNLQ 248 Query 233 NVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGA 292 ++GGPSAG+MF+LAV+DKL+S L G FVAGTGTI DG+VG IGGI HK++AA+ AGA Sbjct 249 DIGGPSAGMMFTLAVIDKLSSEDLTGGRFVAGTGTIGEDGEVGPIGGIVHKVSAAKEAGA 308 Query 293 TVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 +FL PAKNC EA S + + KV TL A++A+ G P +C Sbjct 309 ELFLAPAKNCAEAVSRDTGDMVVAKVHTLDDAIEAMQDFAEGKPVETC 356 >gi|337290220|ref|YP_004629241.1| hypothetical protein CULC22_00606 [Corynebacterium ulcerans BR-AD22] gi|334698526|gb|AEG83322.1| putative secreted protein [Corynebacterium ulcerans BR-AD22] Length=351 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 155/350 (45%), Positives = 211/350 (61%), Gaps = 11/350 (3%) Query 1 VNRRILTLMVALVPIVVFGVLLAV---------VTVPFVALGPGPTFDTLGEIDGKQVVQ 51 + RR+ TL + +PIVV G L+ + +TVP+ A GPGPTF+TLG+IDG+ VV+ Sbjct 1 MKRRLSTLTLGALPIVVLGTLVTIDHVPGTDIDLTVPYAAEGPGPTFNTLGQIDGQDVVE 60 Query 52 IVGTQTYPTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDN 111 I G T G+LNMTTVS R G+TL +AL+ WL + L+P + +YP K+ +++ +N Sbjct 61 IGGADVDKTRGNLNMTTVSIRSGMTLAQALSRWLFTDDTLIPLERIYPKNKTPDQVNQEN 120 Query 112 AADFKRSEAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQF 171 F SEA+A AA+ +L P VAS+++ + LQ GD I +DGT VG Q Sbjct 121 QIAFSSSEASATIAAMNHLGRPVETEVASIVEESAAHGILQEGDVIMDIDGTAVGGPKQV 180 Query 172 TALLKNTKPGQEVTIDFRRKNEPPGIAQITLGKN-KDRDQGVLGIEVVDAPWAPFAVDFH 230 ++ K VTI +RR + A + LGKN D LG+ + P VD+H Sbjct 181 RETVRKKKVDDSVTITYRRDGQKHE-ATVKLGKNPNDPTIPFLGVSMAAKPAGGITVDYH 239 Query 231 LANVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAA 290 L ++GGPSAGLMFSLAVVDKL+ G L G FVAGTGTI DG VG IGGI HK+ AA+ A Sbjct 240 LKDIGGPSAGLMFSLAVVDKLSGGDLNGGKFVAGTGTIDDDGTVGPIGGIAHKVQAAKDA 299 Query 291 GATVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 GA +FL PAKNC EA S G+ ++ V++L A+ + A +G +C Sbjct 300 GAELFLAPAKNCSEAVSRDHDGMTVLSVDSLDDAIKQMDAYNTGGEYTTC 349 >gi|334696341|gb|AEG81138.1| putative secreted protein [Corynebacterium ulcerans 809] Length=351 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 154/350 (44%), Positives = 212/350 (61%), Gaps = 11/350 (3%) Query 1 VNRRILTLMVALVPIVVFGVLLAV---------VTVPFVALGPGPTFDTLGEIDGKQVVQ 51 + RR+ TL + +PIVV G L+ + +TVP+ A GPGPTF+TLG+IDG+ VV+ Sbjct 1 MKRRLSTLTLGALPIVVLGTLVTIDHVPGTDIDLTVPYAAEGPGPTFNTLGQIDGQDVVE 60 Query 52 IVGTQTYPTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDN 111 I G T G+LNMTTVS R G+TL +AL+ WL + L+P + +YP K+ +++ +N Sbjct 61 IGGADVDKTRGNLNMTTVSIRSGMTLAQALSRWLFTDDTLIPLERIYPKNKTPDQVNQEN 120 Query 112 AADFKRSEAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQF 171 F SEA+A AA+ +L P VAS+++ + LQ GD I +DGT VG Q Sbjct 121 QIAFSSSEASATIAAMNHLGRPVETEVASIVEESAAHGILQEGDVIMDIDGTAVGGPKQV 180 Query 172 TALLKNTKPGQEVTIDFRRKNEPPGIAQITLGKN-KDRDQGVLGIEVVDAPWAPFAVDFH 230 ++ K VTI +RR + + + LGKN D LG+ + P VD+H Sbjct 181 RETVRKKKVDDSVTITYRRDGQKHEVT-VKLGKNPNDPTIPFLGVSMAAKPAGGITVDYH 239 Query 231 LANVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAA 290 L ++GGPSAGLMFSLAVVDKL+ G L G FVAGTGTI DG VG IGGI HK+ AA+ A Sbjct 240 LKDIGGPSAGLMFSLAVVDKLSGGDLNGGKFVAGTGTIDDDGTVGPIGGIAHKVQAAKDA 299 Query 291 GATVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 GA +FL PAKNC EA S + G+ ++ V++L A+ + A +G +C Sbjct 300 GAELFLAPAKNCSEAVSRNHDGMTVLSVDSLDDAIKQMDAYNTGGEYTTC 349 >gi|227502919|ref|ZP_03932968.1| S16 family peptidase [Corynebacterium accolens ATCC 49725] gi|227076341|gb|EEI14304.1| S16 family peptidase [Corynebacterium accolens ATCC 49725] Length=373 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 148/349 (43%), Positives = 210/349 (61%), Gaps = 11/349 (3%) Query 2 NRRILTLMVALVPIVVFGVLLAV---------VTVPFVALGPGPTFDTLGEIDGKQVVQI 52 +RR+ T+ +P+V+ G L+++ +TVP+ A GPGPT DTLGE+DG QVV + Sbjct 25 SRRVRTIAWGAIPVVLTGALVSLDHIPGTDVSLTVPYAAEGPGPTVDTLGEVDGTQVVDV 84 Query 53 VGTQTYPTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNA 112 +TY SGHLNMTTVS R +TL +AL W + L+P D V P + EE++ N Sbjct 85 QAPKTYKPSGHLNMTTVSVRTNMTLAQALGRWTLTDDTLVPIDTVIPQNMTDEEVQESNK 144 Query 113 ADFKRSEAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFT 172 F +SE+AA AA+ YL P +TVA V++ G + + L+ D I AVDGT V + Sbjct 145 QAFTQSESAATIAAMDYLHLPVKITVAEVIEDGAASEHLKKDDVITAVDGTEVTEPSEVQ 204 Query 173 ALLKNTKPGQEVTIDFRRKNEPPGIAQITLGKN-KDRDQGVLGIEVVDAPWAPFAVDFHL 231 ++K+ PG +V I R ++ +I LG+N D+ + +LGI ++ P +V+++L Sbjct 205 DMIKDKSPGDKVKISVTRGDKELS-EEIELGENPHDKGKALLGIAMLSQPKDDISVNYNL 263 Query 232 ANVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAG 291 ++GGPSAG+MF+LAV+DKL+ L G TFVAGTGTI D KVG IGGI HK+AAA AG Sbjct 264 QDIGGPSAGMMFTLAVIDKLSDEDLTGGTFVAGTGTIQADSKVGPIGGIEHKIAAAHEAG 323 Query 292 ATVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 A +FL P NC A+ + + +VE L AV A+ +G C Sbjct 324 AELFLAPKDNCSAAAGSDHGDMTIAQVENLDDAVAAMKDFAAGKDVKEC 372 >gi|260577884|ref|ZP_05845815.1| PDZ domain family protein [Corynebacterium jeikeium ATCC 43734] gi|258603978|gb|EEW17224.1| PDZ domain family protein [Corynebacterium jeikeium ATCC 43734] Length=359 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 146/323 (46%), Positives = 201/323 (63%), Gaps = 8/323 (2%) Query 25 VTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPTSGHLNMTTVSQRDGLTLGEALALW 84 +TVP+ A G GPTF+TLGE++ +QVV I G +TYPTSG+LNMTTVS R +TL +AL W Sbjct 37 LTVPYAAEGNGPTFNTLGEVESRQVVDISGAKTYPTSGNLNMTTVSVRTNMTLPQALKRW 96 Query 85 LSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALGYLKYPKAVTVASVMDP 144 +S + L+P + V+P GKS EE++ NAA F SE+ A +A+ +L P + + Sbjct 97 ISTDDTLVPIEHVFPSGKSSEEVQRQNAAAFANSESNATISAMNHLNKPLETMALEISED 156 Query 145 GPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVTIDFRRKNEPPGIAQITLGK 204 P+ K++ D I VDG + + + +K KPG EVT+ +R+ + I ++ L + Sbjct 157 SPAQGKIEVNDIITKVDGEKITLPSELSDKIKGYKPGDEVTVTVKRQEKDKDI-KVKLAE 215 Query 205 -------NKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAGLMFSLAVVDKLTSGHLV 257 + +D LG+ V P V+++L ++GGPSAGLMFS+AVVDKLT L Sbjct 216 LPKEVRGDHPKDTAFLGVTAVAQPGGNIKVEYNLTDIGGPSAGLMFSMAVVDKLTPEELT 275 Query 258 GSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKNCYEASSDSPPGLKLVK 317 G FVAGTGTI GKVG IGGITHK+AAA+ AGA VFLVPA+NC EA + P G+ L+K Sbjct 276 GGKFVAGTGTIDAAGKVGPIGGITHKIAAAKEAGAEVFLVPAQNCAEAVHELPEGITLLK 335 Query 318 VETLSQAVDALHAMTSGSPTPSC 340 V+TL A+ L G +C Sbjct 336 VDTLDDAIKDLKDYNDGKQADTC 358 >gi|300783170|ref|YP_003763461.1| PDZ domain-containing protein [Amycolatopsis mediterranei U32] gi|299792684|gb|ADJ43059.1| PDZ domain-containing protein [Amycolatopsis mediterranei U32] gi|340524550|gb|AEK39755.1| PDZ domain-containing protein [Amycolatopsis mediterranei S699] Length=368 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 149/341 (44%), Positives = 205/341 (61%), Gaps = 1/341 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLG-EIDGKQVVQIVGTQTYP 59 + RR TL+V+ ++F VL +VV VPFVA+ PGPT+DTLG + G V+Q+ G +T+P Sbjct 28 MTRRGWTLVVSGSLFLIFVVLGSVVPVPFVAISPGPTYDTLGRDAAGNPVIQVTGHETHP 87 Query 60 TSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSE 119 T+G L MTTVS DG+TL + L W SG+ L PR+ + PG++ E+++ +N + S+ Sbjct 88 TTGELRMTTVSLHDGVTLFQGLGFWASGRFALAPREEYFKPGETNEQVKQENIQQLQDSQ 147 Query 120 AAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTK 179 A+ AAL L YP V ++ P+ L GD + V+G + A L T Sbjct 148 TNAQVAALRKLGYPIKVLAKQIVSGSPADHVLAPGDKLITVNGKKIVEAADVRAALNGTL 207 Query 180 PGQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSA 239 PGQ V I F+ +P +TL DR +G +G+ VD APF V+ L +VGGPSA Sbjct 208 PGQTVQITFQSDGQPERTVPLTLAARPDRKEGFIGLTAVDRADAPFTVNISLQDVGGPSA 267 Query 240 GLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPA 299 GLMF+LA++D+L SG L G +AGTG I G+V IGGI+ K+ AR AGAT FLVP Sbjct 268 GLMFTLAIIDRLQSGDLAGGRHIAGTGEITETGEVDPIGGISFKVVGAREAGATDFLVPE 327 Query 300 KNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NC EA S +P GL L+KV TL A+ L + +G PT +C Sbjct 328 HNCAEAKSTAPEGLNLIKVSTLDDALTQLANLKAGRPTAAC 368 >gi|317508132|ref|ZP_07965815.1| PDZ domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316253543|gb|EFV12930.1| PDZ domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length=341 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 168/342 (50%), Positives = 215/342 (63%), Gaps = 10/342 (2%) Query 8 LMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGE-ID------GKQVVQIVGTQTYPT 60 ++ A V V+ + VP+VALGPGPT D LG ID GK VV +VG PT Sbjct 1 MLSAGCAFVALLVVAGSLEVPYVALGPGPTLDLLGNGIDDAGKDTGKPVVTVVGKPASPT 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 G L + TVS D L + +AL+LW SG+E+L+PR+ VYP K R+++E +NAADF SE Sbjct 61 RGQLRLVTVSAADQLNMFQALSLWFSGEEELVPREEVYPSDKPRDQVEQENAADFSNSEE 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 AAE AAL L YP V VA V+ P+ KLQ GD + AV G L+ + KP Sbjct 121 AAEAAALSELGYPLQVRVAQVVPGSPADGKLQPGDRLVAVGGAEAKTLEDVAKAVGAHKP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGK-NKDRDQGVLGIEVVDAPWAPFAVDFHL-ANVGGPS 238 G E+ +D++R E G+A++ L D +G +GI++ AP APF V + A +GGPS Sbjct 181 GDELDVDYQR-GEARGVARVVLASAENDPAKGRIGIKMRLAPDAPFQVQIAVPAKIGGPS 239 Query 239 AGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVP 298 GLMF+LAV+DKLTS L G +AGTGTI GKVG IGGITHKM AR GATVFLVP Sbjct 240 GGLMFALAVIDKLTSDDLTGGKDIAGTGTIDPAGKVGPIGGITHKMLGARRDGATVFLVP 299 Query 299 AKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 A+NC EA++D PPGL++V+V TL AV L + +G P PSC Sbjct 300 AENCAEAATDIPPGLRIVRVATLHDAVQELADLRNGKPVPSC 341 >gi|302524553|ref|ZP_07276895.1| hypothetical protein SSMG_00935 [Streptomyces sp. AA4] gi|302433448|gb|EFL05264.1| hypothetical protein SSMG_00935 [Streptomyces sp. AA4] Length=339 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 149/339 (44%), Positives = 205/339 (61%), Gaps = 6/339 (1%) Query 8 LMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLG-EIDGKQVVQIVGTQTYPTSGHLNM 66 ++V+ V +VF V +V VP+VA+ PGPT+DTLG + G V+Q+ G QTY TSG L M Sbjct 1 MLVSGVLFLVFVVAGFLVQVPYVAISPGPTYDTLGRDAAGNPVIQVKGQQTYGTSGELRM 60 Query 67 TTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAA 126 TTVS DG+ L AL LW SG+ L PR+ Y PG++ E+++ +N + S++ A+ AA Sbjct 61 TTVSLNDGINLFTALGLWASGRYALAPREEYYKPGETNEQVKQENIQQLQNSQSNAQVAA 120 Query 127 LGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVTI 186 L +L YP V ++ P+ L GD + +V+G V + A + NTKPG V + Sbjct 121 LRHLGYPVQVVAKQIVSGSPADHILAPGDKLISVNGKQVREAGEVAASIANTKPGDTVQV 180 Query 187 DFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAGLMFSLA 246 F+ +P +TL + DR QG LG+ VD APF+VD L +VGGPSAGLMF+LA Sbjct 181 TFQHLGQPERTVPVTLAQRDDRTQGFLGLTAVDRAVAPFSVDISLQDVGGPSAGLMFTLA 240 Query 247 VVDKLT-----SGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKN 301 ++D+LT L G +AGTG I+ G+VG IGGI+ K+ A+ AGAT FLVP N Sbjct 241 IIDRLTPPGKPGSDLAGGRHIAGTGEISETGQVGPIGGISFKVVGAKEAGATDFLVPEHN 300 Query 302 CYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 C EA S +P GL L+KV L A+ L + +G PT C Sbjct 301 CAEAKSAAPEGLNLIKVSNLDDALKQLDNLKAGRPTAHC 339 >gi|159039639|ref|YP_001538892.1| hypothetical protein Sare_4111 [Salinispora arenicola CNS-205] gi|157918474|gb|ABV99901.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length=337 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 149/340 (44%), Positives = 209/340 (62%), Gaps = 3/340 (0%) Query 1 VNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPT 60 + RR LT+++ + + G+ + +P+V LGPGPT DTLG DG +V+Q+ G +T + Sbjct 1 MRRRGLTVLLGALFTALLGIGVLAAPIPYVVLGPGPTVDTLGTEDGTEVIQVTGRETSDS 60 Query 61 SGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEA 120 +G L +TTV + + L A+ W S E ++PR+LVYPPG+SREE+E NA DFK S+ Sbjct 61 TGELRLTTVGVQPSVKLRTAIQGWFSDDEAVVPRELVYPPGESREEVEERNAEDFKVSQT 120 Query 121 AAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKP 180 +AE AL L +P V V +V + GPSV L+ GD +D+V+G PV + T L++ P Sbjct 121 SAETVALRELGFPVRVVVKTVAEDGPSVGLLRPGDVVDSVNGQPVPVASRLTELIRAEPP 180 Query 181 GQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAG 240 G + I + R PG A+IT + R + +GIE PF + L ++GGPSAG Sbjct 181 GATLEIGYIRDGA-PGTARITSQEKDGRPRIGVGIE--QQQPHPFTLTIDLEDIGGPSAG 237 Query 241 LMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAK 300 LMF+L ++DKLT L G +AGTGTI +G+VG IGGI K+ A+ AGAT FLVPA Sbjct 238 LMFALGIIDKLTPDDLTGGQIIAGTGTIDDEGRVGPIGGIPQKLVGAKDAGATAFLVPAD 297 Query 301 NCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC 340 NC EA + PGL L+KV TL +A+ AL A+ +G C Sbjct 298 NCAEAVRNPQPGLPLLKVATLDEALTALEALRAGGEPARC 337 >gi|262203367|ref|YP_003274575.1| hypothetical protein Gbro_3489 [Gordonia bronchialis DSM 43247] gi|262086714|gb|ACY22682.1| secreted protein containing a PDZ domain-like protein [Gordonia bronchialis DSM 43247] Length=355 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 158/327 (49%), Positives = 205/327 (63%), Gaps = 12/327 (3%) Query 25 VTVPFVALGPGPTFDTLG-----EIDGK----QVVQIVGTQTYPTSGHLNMTTVSQRDGL 75 V VP+VALGPGPT +TLG E DGK +V I G T TSG+LN+TTVS D L Sbjct 30 VPVPYVALGPGPTLNTLGTAKVREPDGKVEERPIVSIQGVPTDKTSGNLNLTTVSVTDNL 89 Query 76 TLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALGYLKYPKA 135 +L EA+ +W+SG+ QL PRD VY P KS EE++ +N A SE A AAL +L P Sbjct 90 SLFEAMGMWVSGEYQLQPRDRVYDPDKSTEEVQQENVAQMTGSEDDATAAALRFLNRPTK 149 Query 136 VTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVTIDFRRKNEPP 195 + + S+ GPS D L+ GD + V GTPV ++F + KPGQ +T+D R P Sbjct 150 LVIGSLTGGGPSSDVLKLGDQVIRVAGTPVSTSEEFATAVSKAKPGQPLTLDIVRGTTPM 209 Query 196 GIAQITLGKNKDRDQGVLGIE--VVDAPWAPFAVDFHLANVGGPSAGLMFSLAVVDKLTS 253 + D++ G +G + VV+A A + +++ N+GGPSAG+M SLAV+D L+ Sbjct 210 TVTVTPRRDADDQNAGDIGAQGSVVNADPA-LKITYYVGNIGGPSAGMMLSLAVIDLLSP 268 Query 254 GHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKNCYEASSDSPPGL 313 G L F+AGTGTI+ G+VG IGGITHK AAR AGATVFLVP NC EA+SD P GL Sbjct 269 GELTHGKFIAGTGTISDTGEVGVIGGITHKTRAARDAGATVFLVPDGNCTEAASDRPDGL 328 Query 314 KLVKVETLSQAVDALHAMTSGSPTPSC 340 +LVKV+TL AVD+L+A+ G P C Sbjct 329 ELVKVDTLQSAVDSLNALGQGRPVAQC 355 >gi|68536692|ref|YP_251397.1| hypothetical protein jk1605 [Corynebacterium jeikeium K411] gi|68264291|emb|CAI37779.1| hypothetical protein jk1605 [Corynebacterium jeikeium K411] Length=359 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 145/323 (45%), Positives = 200/323 (62%), Gaps = 8/323 (2%) Query 25 VTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPTSGHLNMTTVSQRDGLTLGEALALW 84 +TVP+ A G GPTF+TLGE++ +QVV I G +TYPTSG+LNMTTVS R +TL +AL W Sbjct 37 LTVPYAAEGNGPTFNTLGEVESRQVVDISGAKTYPTSGNLNMTTVSVRTNMTLPQALKRW 96 Query 85 LSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALGYLKYPKAVTVASVMDP 144 +S + L+P + V+P GKS EE++ NA F SE+ A +A+ +L P + + Sbjct 97 ISTDDTLVPIEHVFPSGKSSEEVQRQNAVAFANSESNATISAMNHLNKPLETMALEISED 156 Query 145 GPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVTIDFRRKNEPPGIAQITLGK 204 P+ K++ D I VDG + + + +K KPG EVT+ +R+ + I ++ L + Sbjct 157 SPAQGKIEVNDIITKVDGEKITLPSELSDKIKGYKPGDEVTVTVKRQEKDKDI-KVKLAE 215 Query 205 -------NKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAGLMFSLAVVDKLTSGHLV 257 + +D LG+ V P V+++L ++GGPSAGLMFS+AVVDKLT L Sbjct 216 LPKEVRGDHPKDTAFLGVTAVAQPGGNIKVEYNLTDIGGPSAGLMFSMAVVDKLTPEELT 275 Query 258 GSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKNCYEASSDSPPGLKLVK 317 G FVAGTGTI GKVG IGGITHK+AAA+ AGA VFLVPA+NC EA + P G+ L+K Sbjct 276 GGKFVAGTGTIDAAGKVGPIGGITHKIAAAKEAGAEVFLVPAQNCAEAVHEPPEGITLLK 335 Query 318 VETLSQAVDALHAMTSGSPTPSC 340 V+TL A+ L G +C Sbjct 336 VDTLDDAIKDLKDYNDGKQADTC 358 Lambda K H 0.316 0.134 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 617544973600 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40