BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3201c Length=1101 Score E Sequences producing significant alignments: (Bits) Value gi|308232374|ref|ZP_07415860.2| ATP-dependent DNA helicase [Myco... 2163 0.0 gi|15610337|ref|NP_217717.1| ATP-dependent DNA helicase [Mycobac... 2162 0.0 gi|306782246|ref|ZP_07420583.1| ATP-dependent DNA helicase [Myco... 2162 0.0 gi|308371270|ref|ZP_07424390.2| ATP-dependent DNA helicase [Myco... 2162 0.0 gi|294993862|ref|ZP_06799553.1| ATP-dependent DNA helicase [Myco... 2162 0.0 gi|289444772|ref|ZP_06434516.1| ATP-dependent DNA helicase [Myco... 2161 0.0 gi|340628178|ref|YP_004746630.1| putative ATP-dependent DNA heli... 2159 0.0 gi|289763384|ref|ZP_06522762.1| ATP-dependent DNA helicase [Myco... 2146 0.0 gi|167968315|ref|ZP_02550592.1| hypothetical ATP-dependent DNA h... 2013 0.0 gi|289759336|ref|ZP_06518714.1| helicase [Mycobacterium tubercul... 1719 0.0 gi|339296032|gb|AEJ48143.1| ATP-dependent DNA helicase [Mycobact... 1707 0.0 gi|342861156|ref|ZP_08717805.1| hypothetical protein MCOL_19832 ... 1618 0.0 gi|183981382|ref|YP_001849673.1| ATP-dependent DNA helicase [Myc... 1615 0.0 gi|296169029|ref|ZP_06850691.1| UvrD/Rep family helicase [Mycoba... 1611 0.0 gi|118618002|ref|YP_906334.1| ATP-dependent DNA helicase [Mycoba... 1608 0.0 gi|240172137|ref|ZP_04750796.1| ATP-dependent DNA helicase [Myco... 1605 0.0 gi|336459532|gb|EGO38469.1| DNA/RNA helicase, superfamily I [Myc... 1565 0.0 gi|41409398|ref|NP_962234.1| hypothetical protein MAP3300c [Myco... 1564 0.0 gi|254776585|ref|ZP_05218101.1| hypothetical protein MaviaA2_182... 1551 0.0 gi|118467070|ref|YP_883295.1| superfamily protein I DNA and RNA ... 1544 0.0 gi|298526678|ref|ZP_07014087.1| ATP-dependent DNA helicase [Myco... 1439 0.0 gi|333991556|ref|YP_004524170.1| ATP-dependent DNA helicase [Myc... 1431 0.0 gi|118472301|ref|YP_886308.1| ATP-dependent DNA helicase [Mycoba... 1399 0.0 gi|108798375|ref|YP_638572.1| UvrD/REP helicase [Mycobacterium s... 1370 0.0 gi|126434059|ref|YP_001069750.1| UvrD/REP helicase [Mycobacteriu... 1368 0.0 gi|145225243|ref|YP_001135921.1| UvrD/REP helicase [Mycobacteriu... 1366 0.0 gi|315445540|ref|YP_004078419.1| DNA/RNA helicase, superfamily I... 1360 0.0 gi|289571423|ref|ZP_06451650.1| UvrD/Rep family helicase [Mycoba... 1352 0.0 gi|120402801|ref|YP_952630.1| UvrD/REP helicase [Mycobacterium v... 1299 0.0 gi|308377259|ref|ZP_07441669.2| UvrD/REP helicase subfamily [Myc... 1255 0.0 gi|169630596|ref|YP_001704245.1| ATP-dependent DNA helicase [Myc... 1179 0.0 gi|308377258|ref|ZP_07441668.2| hypothetical protein TMHG_02416 ... 1158 0.0 gi|111023339|ref|YP_706311.1| ATP-dependent DNA helicase [Rhodoc... 1111 0.0 gi|226365847|ref|YP_002783630.1| ATP-dependent DNA helicase [Rho... 1109 0.0 gi|325675756|ref|ZP_08155440.1| UvrD/Rep family helicase [Rhodoc... 1102 0.0 gi|312140617|ref|YP_004007953.1| uvrd/rep family ATP-dependent D... 1098 0.0 gi|229490998|ref|ZP_04384831.1| UvrD/REP helicase domain protein... 1075 0.0 gi|226305706|ref|YP_002765666.1| ATP-dependent DNA helicase [Rho... 1074 0.0 gi|333921406|ref|YP_004494987.1| putative ATP-dependent DNA heli... 1034 0.0 gi|343927589|ref|ZP_08767057.1| putative ATP-dependent DNA helic... 987 0.0 gi|289751887|ref|ZP_06511265.1| superfamily protein I DNA and RN... 968 0.0 gi|262203378|ref|YP_003274586.1| UvrD/REP helicase [Gordonia bro... 965 0.0 gi|296138860|ref|YP_003646103.1| UvrD/REP helicase [Tsukamurella... 949 0.0 gi|54026511|ref|YP_120753.1| putative DNA helicase [Nocardia far... 949 0.0 gi|326383310|ref|ZP_08204998.1| UvrD/REP helicase [Gordonia neof... 911 0.0 gi|134097674|ref|YP_001103335.1| ATP-dependent DNA helicase [Sac... 871 0.0 gi|300783060|ref|YP_003763351.1| ATP-dependent DNA helicase [Amy... 848 0.0 gi|302524415|ref|ZP_07276757.1| ATP-dependent DNA helicase [Stre... 843 0.0 gi|257054747|ref|YP_003132579.1| DNA/RNA helicase, superfamily I... 836 0.0 gi|254821705|ref|ZP_05226706.1| hypothetical protein MintA_17347... 778 0.0 >gi|308232374|ref|ZP_07415860.2| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu001] gi|308379444|ref|ZP_07486303.2| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu010] gi|308380606|ref|ZP_07490521.2| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu011] gi|308214071|gb|EFO73470.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu001] gi|308356886|gb|EFP45737.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu010] gi|308360886|gb|EFP49737.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu011] Length=1144 Score = 2163 bits (5605), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1101/1101 (100%), Positives = 1101/1101 (100%), Gaps = 0/1101 (0%) Query 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL Sbjct 44 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 103 Query 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG Sbjct 104 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 163 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG Sbjct 164 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 223 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE Sbjct 224 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 283 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG Sbjct 284 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 343 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL Sbjct 344 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 403 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD Sbjct 404 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 463 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA Sbjct 464 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 523 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI Sbjct 524 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 583 Query 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG Sbjct 584 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 643 Query 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV Sbjct 644 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 703 Query 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV Sbjct 704 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 763 Query 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP Sbjct 764 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 823 Query 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR Sbjct 824 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 883 Query 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP Sbjct 884 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 943 Query 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP Sbjct 944 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 1003 Query 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG Sbjct 1004 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1063 Query 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE Sbjct 1064 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1123 Query 1081 LPAPGELAMLLTDCAGRRSDT 1101 LPAPGELAMLLTDCAGRRSDT Sbjct 1124 LPAPGELAMLLTDCAGRRSDT 1144 >gi|15610337|ref|NP_217717.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis H37Rv] gi|15842787|ref|NP_337824.1| UvrD/Rep family helicase [Mycobacterium tuberculosis CDC1551] gi|31794378|ref|NP_856871.1| ATP-dependent DNA helicase [Mycobacterium bovis AF2122/97] 37 more sequence titles Length=1101 Score = 2162 bits (5603), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1101/1101 (100%), Positives = 1101/1101 (100%), Gaps = 0/1101 (0%) Query 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL Sbjct 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 Query 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG Sbjct 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG Sbjct 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE Sbjct 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG Sbjct 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL Sbjct 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD Sbjct 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA Sbjct 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI Sbjct 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 Query 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG Sbjct 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 Query 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV Sbjct 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV Sbjct 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP Sbjct 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR Sbjct 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP Sbjct 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP Sbjct 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG Sbjct 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE Sbjct 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query 1081 LPAPGELAMLLTDCAGRRSDT 1101 LPAPGELAMLLTDCAGRRSDT Sbjct 1081 LPAPGELAMLLTDCAGRRSDT 1101 >gi|306782246|ref|ZP_07420583.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu002] gi|306794956|ref|ZP_07433258.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu005] gi|306799158|ref|ZP_07437460.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu006] gi|308325002|gb|EFP13853.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu002] gi|308336739|gb|EFP25590.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu005] gi|308340579|gb|EFP29430.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu006] Length=1101 Score = 2162 bits (5602), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1100/1101 (99%), Positives = 1100/1101 (99%), Gaps = 0/1101 (0%) Query 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL Sbjct 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 Query 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG Sbjct 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG Sbjct 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE Sbjct 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG Sbjct 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL Sbjct 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD Sbjct 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA Sbjct 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI Sbjct 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 Query 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG Sbjct 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 Query 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEV ENGLPPAELTVACDRV Sbjct 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVAENGLPPAELTVACDRV 660 Query 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV Sbjct 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP Sbjct 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR Sbjct 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP Sbjct 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP Sbjct 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG Sbjct 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE Sbjct 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query 1081 LPAPGELAMLLTDCAGRRSDT 1101 LPAPGELAMLLTDCAGRRSDT Sbjct 1081 LPAPGELAMLLTDCAGRRSDT 1101 >gi|308371270|ref|ZP_07424390.2| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu003] gi|308372459|ref|ZP_07428757.2| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu004] gi|308376024|ref|ZP_07445856.2| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu007] gi|308378226|ref|ZP_07481952.2| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu009] gi|308329221|gb|EFP18072.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu003] gi|308333053|gb|EFP21904.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu004] gi|308344515|gb|EFP33366.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu007] gi|308353144|gb|EFP41995.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis SUMu009] Length=1144 Score = 2162 bits (5601), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1100/1101 (99%), Positives = 1100/1101 (99%), Gaps = 0/1101 (0%) Query 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL Sbjct 44 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 103 Query 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG Sbjct 104 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 163 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG Sbjct 164 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 223 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE Sbjct 224 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 283 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG Sbjct 284 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 343 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL Sbjct 344 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 403 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD Sbjct 404 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 463 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA Sbjct 464 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 523 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI Sbjct 524 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 583 Query 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG Sbjct 584 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 643 Query 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEV ENGLPPAELTVACDRV Sbjct 644 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVAENGLPPAELTVACDRV 703 Query 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV Sbjct 704 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 763 Query 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP Sbjct 764 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 823 Query 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR Sbjct 824 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 883 Query 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP Sbjct 884 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 943 Query 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP Sbjct 944 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 1003 Query 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG Sbjct 1004 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1063 Query 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE Sbjct 1064 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1123 Query 1081 LPAPGELAMLLTDCAGRRSDT 1101 LPAPGELAMLLTDCAGRRSDT Sbjct 1124 LPAPGELAMLLTDCAGRRSDT 1144 >gi|294993862|ref|ZP_06799553.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis 210] gi|326902572|gb|EGE49505.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis W-148] gi|339299642|gb|AEJ51752.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis CCDC5180] Length=1101 Score = 2162 bits (5601), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1100/1101 (99%), Positives = 1101/1101 (100%), Gaps = 0/1101 (0%) Query 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL Sbjct 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 Query 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG Sbjct 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG Sbjct 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE Sbjct 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 RMHAGKVMDFAMQMASAARLAATSPQVG+DLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG Sbjct 241 RMHAGKVMDFAMQMASAARLAATSPQVGRDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL Sbjct 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD Sbjct 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA Sbjct 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI Sbjct 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 Query 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG Sbjct 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 Query 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV Sbjct 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV Sbjct 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP Sbjct 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR Sbjct 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP Sbjct 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP Sbjct 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG Sbjct 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE Sbjct 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query 1081 LPAPGELAMLLTDCAGRRSDT 1101 LPAPGELAMLLTDCAGRRSDT Sbjct 1081 LPAPGELAMLLTDCAGRRSDT 1101 >gi|289444772|ref|ZP_06434516.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis T46] gi|289417691|gb|EFD14931.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis T46] Length=1101 Score = 2161 bits (5599), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1100/1101 (99%), Positives = 1100/1101 (99%), Gaps = 0/1101 (0%) Query 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL Sbjct 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 Query 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG Sbjct 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG Sbjct 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE Sbjct 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG Sbjct 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL Sbjct 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD Sbjct 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA Sbjct 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAAS DADNPCLADAI Sbjct 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASVDADNPCLADAI 540 Query 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG Sbjct 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 Query 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV Sbjct 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV Sbjct 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP Sbjct 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR Sbjct 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP Sbjct 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP Sbjct 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG Sbjct 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE Sbjct 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query 1081 LPAPGELAMLLTDCAGRRSDT 1101 LPAPGELAMLLTDCAGRRSDT Sbjct 1081 LPAPGELAMLLTDCAGRRSDT 1101 >gi|340628178|ref|YP_004746630.1| putative ATP-dependent DNA helicase [Mycobacterium canettii CIPT 140010059] gi|340006368|emb|CCC45548.1| putative ATP-dependent DNA helicase [Mycobacterium canettii CIPT 140010059] Length=1101 Score = 2159 bits (5594), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1099/1101 (99%), Positives = 1100/1101 (99%), Gaps = 0/1101 (0%) Query 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL Sbjct 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 Query 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG Sbjct 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG Sbjct 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE Sbjct 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG Sbjct 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL Sbjct 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD Sbjct 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA Sbjct 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI Sbjct 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 Query 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG Sbjct 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 Query 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV Sbjct 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV Sbjct 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 LDTSAVADRKQLSDKISEHRRLLD+RRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP Sbjct 721 LDTSAVADRKQLSDKISEHRRLLDQRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR Sbjct 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP Sbjct 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP Sbjct 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 GAADREVGDPEELAALQRAF ASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG Sbjct 961 GAADREVGDPEELAALQRAFAASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE Sbjct 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query 1081 LPAPGELAMLLTDCAGRRSDT 1101 LPAPGELAMLLTDCAGRRSDT Sbjct 1081 LPAPGELAMLLTDCAGRRSDT 1101 >gi|289763384|ref|ZP_06522762.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis GM 1503] gi|289710890|gb|EFD74906.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis GM 1503] Length=1101 Score = 2146 bits (5560), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1095/1101 (99%), Positives = 1095/1101 (99%), Gaps = 0/1101 (0%) Query 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL Sbjct 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 Query 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG Sbjct 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG Sbjct 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE Sbjct 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG Sbjct 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL Sbjct 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD Sbjct 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA Sbjct 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI Sbjct 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 Query 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG Sbjct 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 Query 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV Sbjct 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 QVLTVHAAKGLE AHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV Sbjct 661 QVLTVHAAKGLEMAGGGGAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP Sbjct 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR Sbjct 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP Sbjct 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP Sbjct 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG Sbjct 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE Sbjct 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query 1081 LPAPGELAMLLTDCAGRRSDT 1101 LPAPGELAMLLTDCAGRRSDT Sbjct 1081 LPAPGELAMLLTDCAGRRSDT 1101 >gi|167968315|ref|ZP_02550592.1| hypothetical ATP-dependent DNA helicase [Mycobacterium tuberculosis H37Ra] Length=1031 Score = 2013 bits (5216), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1025/1031 (99%), Positives = 1027/1031 (99%), Gaps = 0/1031 (0%) Query 71 VLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAGSLLRDYGLLL 130 +LGLTFTRKAAGQLLRRVRSRLARLAG LGCGDPAACAPVVSTY+AFAGSLLRDYGLLL Sbjct 1 MLGLTFTRKAAGQLLRRVRSRLARLAGTRLGCGDPAACAPVVSTYYAFAGSLLRDYGLLL 60 Query 131 PLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTRALR 190 PLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTRALR Sbjct 61 PLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTRALR 120 Query 191 DTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKVMDF 250 DTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKVMDF Sbjct 121 DTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKVMDF 180 Query 251 AMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLALTA 310 AMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLALTA Sbjct 181 AMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLALTA 240 Query 311 VGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGISAEA 370 VGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGISAEA Sbjct 241 VGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGISAEA 300 Query 371 RRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTAAVL 430 RRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTAAVL Sbjct 301 RRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTAAVL 360 Query 431 VRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRVLTG 490 VRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRVLTG Sbjct 361 VRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRVLTG 420 Query 491 PRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAISDPGSAEGYS 550 PRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAISDPGSAEGYS Sbjct 421 PRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAISDPGSAEGYS 480 Query 551 VAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGPEHLDA 610 VAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGPEHLDA Sbjct 481 VAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGPEHLDA 540 Query 611 FADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRVQVLTVHAAKG 670 FADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRVQVLTVHAAKG Sbjct 541 FADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRVQVLTVHAAKG 600 Query 671 LEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRK 730 LEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRK Sbjct 601 LEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRK 660 Query 731 QLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCEL 790 QLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCEL Sbjct 661 QLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCEL 720 Query 791 KDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARRGDVERGAALV 850 KDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARRGDVERGAALV Sbjct 721 KDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARRGDVERGAALV 780 Query 851 AAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVE 910 AAAMSADLPGSTTDIDHPPRPGDAPWST VDALLA RAHAARGAPARGLPNHLSVSSLVE Sbjct 781 AAAMSADLPGSTTDIDHPPRPGDAPWSTYVDALLAARAHAARGAPARGLPNHLSVSSLVE 840 Query 911 LVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDP 970 LVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDP Sbjct 841 LVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDP 900 Query 971 EELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGK 1030 EELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGK Sbjct 901 EELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGK 960 Query 1031 PPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAML 1090 PPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAML Sbjct 961 PPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAML 1020 Query 1091 LTDCAGRRSDT 1101 LTDCAGRRSDT Sbjct 1021 LTDCAGRRSDT 1031 >gi|289759336|ref|ZP_06518714.1| helicase [Mycobacterium tuberculosis T85] gi|289714900|gb|EFD78912.1| helicase [Mycobacterium tuberculosis T85] Length=953 Score = 1719 bits (4452), Expect = 0.0, Method: Compositional matrix adjust. Identities = 875/877 (99%), Positives = 877/877 (100%), Gaps = 0/877 (0%) Query 225 QTQRAELVPLLDALGERMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQ 284 +TQRAELVPLLDALGERMHAGKVMDFAMQMASAARLAATSPQVG+DLRRRYRVVLLDEYQ Sbjct 77 KTQRAELVPLLDALGERMHAGKVMDFAMQMASAARLAATSPQVGRDLRRRYRVVLLDEYQ 136 Query 285 DTGHAQRVVLSSLFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPA 344 DTGHAQRVVLSSLFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPA Sbjct 137 DTGHAQRVVLSSLFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPA 196 Query 345 PVLELLTSWRNPPQALRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAERE 404 PVLELLTSWRNPPQALRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAERE Sbjct 197 PVLELLTSWRNPPQALRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAERE 256 Query 405 WIADHLRMRYQRAEADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPE 464 WIADHLRMRYQRAEADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPE Sbjct 257 WIADHLRMRYQRAEADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPE 316 Query 465 VAEVVAMLRLVADPTAGAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIA 524 VAEVVAMLRLVADPTAGAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIA Sbjct 317 VAEVVAMLRLVADPTAGAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIA 376 Query 525 MAASADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRR 584 MAASADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRR Sbjct 377 MAASADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRR 436 Query 585 VLGVDCEVRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVV 644 VLGVDCEVRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVV Sbjct 437 VLGVDCEVRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVV 496 Query 645 ENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPP 704 ENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPP Sbjct 497 ENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPP 556 Query 705 LLRGDRASAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAED 764 LLRGDRASAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAED Sbjct 557 LLRGDRASAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAED 616 Query 765 TLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCD 824 TLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCD Sbjct 617 TLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCD 676 Query 825 NAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALL 884 NAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALL Sbjct 677 NAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALL 736 Query 885 AERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWV 944 AERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWV Sbjct 737 AERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWV 796 Query 945 QQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDT 1004 QQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDT Sbjct 797 QQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDT 856 Query 1005 VVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVR 1064 VVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVR Sbjct 857 VVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVR 916 Query 1065 TAFYYVRSGITVVPDELPAPGELAMLLTDCAGRRSDT 1101 TAFYYVRSGITVVPDELPAPGELAMLLTDCAGRRSDT Sbjct 917 TAFYYVRSGITVVPDELPAPGELAMLLTDCAGRRSDT 953 >gi|339296032|gb|AEJ48143.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis CCDC5079] Length=921 Score = 1707 bits (4420), Expect = 0.0, Method: Compositional matrix adjust. Identities = 874/875 (99%), Positives = 875/875 (100%), Gaps = 0/875 (0%) Query 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL Sbjct 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 Query 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG Sbjct 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG Sbjct 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE Sbjct 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 RMHAGKVMDFAMQMASAARLAATSPQVG+DLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG Sbjct 241 RMHAGKVMDFAMQMASAARLAATSPQVGRDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL Sbjct 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD Sbjct 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA Sbjct 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI Sbjct 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 Query 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG Sbjct 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 Query 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV Sbjct 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV Sbjct 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP Sbjct 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR Sbjct 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAP 875 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAP Sbjct 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAP 875 >gi|342861156|ref|ZP_08717805.1| hypothetical protein MCOL_19832 [Mycobacterium colombiense CECT 3035] gi|342131600|gb|EGT84870.1| hypothetical protein MCOL_19832 [Mycobacterium colombiense CECT 3035] Length=1115 Score = 1618 bits (4191), Expect = 0.0, Method: Compositional matrix adjust. Identities = 865/1098 (79%), Positives = 928/1098 (85%), Gaps = 17/1098 (1%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 RYSPAELA ALGLFPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL+ANGYA+P Sbjct 23 RYSPAELAGALGLFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLIANGYADP 82 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAGSLLRDYGL 128 GQVLGLTFTRKAAGQLLRRVRSRLARLAG+GLG AP VSTYHAFAGSLLRDYGL Sbjct 83 GQVLGLTFTRKAAGQLLRRVRSRLARLAGVGLGAAVDTEGAPTVSTYHAFAGSLLRDYGL 142 Query 129 LLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTRA 188 LLP+EPDTRLL ETELWQLAFDVV+GY G L TDK+PAAVTS+V+RLWGQL EHLVDT Sbjct 143 LLPVEPDTRLLGETELWQLAFDVVNGYPGELRTDKTPAAVTSMVLRLWGQLAEHLVDTGQ 202 Query 189 LRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKVM 248 LRDTHVELERL+H LPAGRYQRDRGPSQWLLR+LATQT+R ELVPLLDAL +RM KVM Sbjct 203 LRDTHVELERLIHCLPAGRYQRDRGPSQWLLRLLATQTERTELVPLLDALNDRMRVAKVM 262 Query 249 DFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLAL 308 DF MQMASAARLAAT PQVG+DLR RYRVVLLDEYQDTGHAQR+ LS+LFGGGVDDGLAL Sbjct 263 DFGMQMASAARLAATFPQVGEDLRGRYRVVLLDEYQDTGHAQRIALSALFGGGVDDGLAL 322 Query 309 TAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGISA 368 TAVGDPIQSIYGWRGASATNLPRFTTDFP SDGTPAP+ EL TSWRNPP+ LRVAN +SA Sbjct 323 TAVGDPIQSIYGWRGASATNLPRFTTDFPRSDGTPAPMCELRTSWRNPPRTLRVANAVSA 382 Query 369 EARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTAA 428 EARRRSVAV ALRPRPDAPPG VRCALLPDV AEREWIADHL RY++A +GV PPTAA Sbjct 383 EARRRSVAVHALRPRPDAPPGTVRCALLPDVAAEREWIADHLDARYRQARDEGVGPPTAA 442 Query 429 VLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRVL 488 VLVRRNADAA IAD LRARGIP EVVGLAGLL+IPEVAEVVAMLRLVADPTAGAAAMRVL Sbjct 443 VLVRRNADAAPIADALRARGIPVEVVGLAGLLAIPEVAEVVAMLRLVADPTAGAAAMRVL 502 Query 489 TGPRWRLGARDLAALWRRALTLSG--ESPSTASPESIAMAASADADNPCLADAISDPGSA 546 TG RWRLGARDLAALW+RA L G + +SPESIA AA DAD CLADAI+DPG+A Sbjct 503 TGSRWRLGARDLAALWQRARALGGLAQPAEPSSPESIASAAGPDADTACLADAIADPGAA 562 Query 547 EGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGPE 606 YS AGY RI AL EL+ALR LGH LPDLVAEVRRVLG+DCEVRA+A V GWAG E Sbjct 563 GAYSAAGYQRITALGAELNALRAHLGHPLPDLVAEVRRVLGIDCEVRAAAGVGAGWAGTE 622 Query 607 HLDAFADVVAGYAERASAR------SSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 HLDAFADVVAGYAER A S+ SV GLLAYLDVAE VENGL PA L VA DRV Sbjct 623 HLDAFADVVAGYAERTGAATGPADGSAATSVTGLLAYLDVAESVENGLAPAPLAVARDRV 682 Query 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 QVLTVH+AKGLEWQVVAVAHLS G FPST S+S+WLTD AELPPLLRGDRA+AGA GIP+ Sbjct 683 QVLTVHSAKGLEWQVVAVAHLSGGTFPSTASKSTWLTDAAELPPLLRGDRAAAGALGIPM 742 Query 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 +DTS V +RKQLSDKISEHRR L++RRVDEERRLLYVA+TRAEDTLLVSGHHW TG KP Sbjct 743 MDTSDVTNRKQLSDKISEHRRQLEQRRVDEERRLLYVAITRAEDTLLVSGHHWAATGIKP 802 Query 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 RGPS+FLCE+K +ID S AAGDPCG VE WA PA ERNPL DN +EAVWP DPLAARR Sbjct 803 RGPSDFLCEIKAVIDDSTAAGDPCGTVEHWAPPPADGERNPLRDNVVEAVWPPDPLAARR 862 Query 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 GDVE GAALVA A+ AD + D+D W+ DVDALLAERA A+ PA LP Sbjct 863 GDVEHGAALVAQALRADATEACVDVDG--------WAADVDALLAERARLAQ-PPATVLP 913 Query 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 LSVSSLV L DP G QRL RLP RP+PHA LG+AFHAWVQ+FYGAE LF+LGDLP Sbjct 914 GQLSVSSLVGLARDPAGTAQRLRHRLPSRPEPHALLGNAFHAWVQKFYGAECLFELGDLP 973 Query 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 GAAD +VGD ELAALQ AFT S WAAR P AVEVPFEMPIGDT+VRGRIDAVF DPDGG Sbjct 974 GAADSDVGDTAELAALQHAFTESPWAARIPVAVEVPFEMPIGDTLVRGRIDAVFADPDGG 1033 Query 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 ATVVDWKTG+PPHGP AMRQAAVQLAVYR AWAAL G P SSVRTAF+YVR+G TV P++ Sbjct 1034 ATVVDWKTGEPPHGPEAMRQAAVQLAVYRAAWAALAGIPESSVRTAFHYVRAGTTVTPEQ 1093 Query 1081 LPAPGELAMLLTDCAGRR 1098 LP+ E+A LLTD AG R Sbjct 1094 LPSAAEVAGLLTDPAGDR 1111 >gi|183981382|ref|YP_001849673.1| ATP-dependent DNA helicase [Mycobacterium marinum M] gi|183174708|gb|ACC39818.1| ATP-dependent DNA helicase [Mycobacterium marinum M] Length=1101 Score = 1615 bits (4182), Expect = 0.0, Method: Compositional matrix adjust. Identities = 872/1101 (80%), Positives = 937/1101 (86%), Gaps = 26/1101 (2%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 RYSP E+A ALG+FPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP Sbjct 4 RYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 63 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAG--IGLGCGDPAACAPVVSTYHAFAGSLLRDY 126 GQVLGLTFTRKAAGQLLRRVRSRLARLAG +G+ G+ AA AP VSTYHAFAGSLLRD+ Sbjct 64 GQVLGLTFTRKAAGQLLRRVRSRLARLAGTTVGVAVGE-AAGAPTVSTYHAFAGSLLRDH 122 Query 127 GLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDT 186 GLLLP+EPDTRLLSETELWQLAF+VV+GY G LCT K+PAAVT+ V+RLWGQL EHLVDT Sbjct 123 GLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDT 182 Query 187 RALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGK 246 R LRDTH+ELERLVHALPAG QRD GP+QWLLRMLATQT+RAELVPLLDAL ERM A K Sbjct 183 RQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAAK 242 Query 247 VMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGL 306 VMDF MQMA+AARLAAT PQVG++LR RYRVVLLDEYQDTGH+QRV LS+LFGGGVDDGL Sbjct 243 VMDFGMQMAAAARLAATCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDDGL 302 Query 307 ALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGI 366 ALTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PAPVLEL TSWRNPP+AL +AN I Sbjct 303 ALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLANAI 362 Query 367 SAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPT 426 SAEARRRSVAV ALR RPDAP G VRCALL DVQAER+WIAD L+ YQRA ADGV PPT Sbjct 363 SAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPT 422 Query 427 AAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMR 486 AAVLVRRNADAA IAD L ARGIP EVVGLAGLLSIPEVA++VAMLRLV DPTAGAAAMR Sbjct 423 AAVLVRRNADAAPIADALVARGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMR 482 Query 487 VLTGPRWRLGARDLAALWRRALTLSG--ESPSTASPESIAMAASADADNPCLADAISDPG 544 VLTGPRWRLG D+AALWRRA+ L G + ++ASP ++A AA D D CLADAI DPG Sbjct 483 VLTGPRWRLGGSDVAALWRRAVALVGGPQVGASASPGAVAAAAGPDTDTACLADAICDPG 542 Query 545 SAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAG 604 A+ YS AGY RIGALA EL+ALRG LGH LPDLVAEVRRVLG+DC+VRA+A SG WAG Sbjct 543 PADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRAAATASGAWAG 602 Query 605 PEHLDAFADVVAGYAERA-----SARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDR 659 EHLDAFADVVA YAERA SA S++ASV GLLAYLDVA VENGLPPA+LTVA DR Sbjct 603 AEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDR 662 Query 660 VQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIP 719 VQVLTVHAAKGLEWQVVAVAHLS GVFPST SRSSWLTDP ELPPLLRGDRAS GA GIP Sbjct 663 VQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALGIP 722 Query 720 VLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTK 779 VLDTSAV +RKQLSD IS HR LD+RRVDEERRLLYV VTRAEDT+LVSGHHWG TG K Sbjct 723 VLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLK 782 Query 780 PRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAAR 839 PRGPS+FLCELKDII+RSAAAGDPCG V+QW AP ERNPL D+ +EAVWP DPLA R Sbjct 783 PRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATR 842 Query 840 RGDVERGAALVAAAMSADL-------PGSTTDIDHPPRPGDAPWSTDVDALLAERAHAAR 892 RGDVERGA LVA A+SAD + DI+ W+ DVDALLAERA A Sbjct 843 RGDVERGARLVAEAISADAGVEAPAGGAAVADIEG--------WTADVDALLAERARAV- 893 Query 893 GAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAEL 952 G P R LPN LSVS LVEL DPVGARQRL+ RLP RPDPHA LG+AFH WVQQFYGAEL Sbjct 894 GPPTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAEL 953 Query 953 LFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDA 1012 LFDLGDLPGAAD +VG E+LA LQ AF S WAARTP AVEVPFEMP+GDTVVRGRIDA Sbjct 954 LFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDA 1013 Query 1013 VFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRS 1072 VF DPDGGATVVDWKTG+PP GP AMRQAAVQLAVYR+AWAALRGCP SSVRTAF+YVR+ Sbjct 1014 VFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRT 1073 Query 1073 GITVVPDELPAPGELAMLLTD 1093 G+TV+PDELP LA LL D Sbjct 1074 GVTVIPDELPDGMALAELLAD 1094 >gi|296169029|ref|ZP_06850691.1| UvrD/Rep family helicase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896288|gb|EFG75947.1| UvrD/Rep family helicase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=1135 Score = 1611 bits (4172), Expect = 0.0, Method: Compositional matrix adjust. Identities = 861/1092 (79%), Positives = 926/1092 (85%), Gaps = 18/1092 (1%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 R+SPAELA ALGLFPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL+ANGYAEP Sbjct 47 RFSPAELADALGLFPPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLIANGYAEP 106 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLG----CGDPAACAPVVSTYHAFAGSLLR 124 GQVLGLTFTRKAAGQLLRRVRSRLARLAG+GLG A AP VSTYHAFAGSL+R Sbjct 107 GQVLGLTFTRKAAGQLLRRVRSRLARLAGVGLGPDGPAPAEPAGAPTVSTYHAFAGSLIR 166 Query 125 DYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLV 184 DYGLLLP+EPDTRLL ETELWQLAFDVVSGY G L TDK+PAA+TS+V+RLWGQL EHLV Sbjct 167 DYGLLLPVEPDTRLLGETELWQLAFDVVSGYRGELRTDKTPAAITSMVLRLWGQLAEHLV 226 Query 185 DTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHA 244 DTR L DTHVELERL+H LPAG YQRDRGPSQWLLR+LATQTQRAELVPLLDAL RM A Sbjct 227 DTRQLGDTHVELERLIHTLPAGPYQRDRGPSQWLLRLLATQTQRAELVPLLDALDARMRA 286 Query 245 GKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDD 304 K MDF +QMASAARLAA PQVG++LR RYRVVLLDEYQDTGHAQRV LS+LFGGGVDD Sbjct 287 AKTMDFGVQMASAARLAANFPQVGEELRGRYRVVLLDEYQDTGHAQRVALSALFGGGVDD 346 Query 305 GLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVAN 364 GLALTAVGDPIQSIYGWRGASATNLPRF TDFP +DGTPAPVLEL TSWRNPP+ L +AN Sbjct 347 GLALTAVGDPIQSIYGWRGASATNLPRFATDFPRADGTPAPVLELRTSWRNPPRTLALAN 406 Query 365 GISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKP 424 ISAEARRRSVAVR LRPRPDAPPG V CALLPDVQAEREWIAD L RY+ A+ADG P Sbjct 407 AISAEARRRSVAVRPLRPRPDAPPGTVCCALLPDVQAEREWIADELAARYRAAQADGAGP 466 Query 425 PTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAA 484 PTAAVLVRRNADAA IAD LRARG+P EVVGLAGLLS+PEVA+VVAMLRLVADPTAGAAA Sbjct 467 PTAAVLVRRNADAAPIADALRARGLPVEVVGLAGLLSVPEVADVVAMLRLVADPTAGAAA 526 Query 485 MRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAISDPG 544 MRVLTGPRWRLG RD+AALWRRA L SPESIA+AA DAD PCLADA++DPG Sbjct 527 MRVLTGPRWRLGGRDIAALWRRARQLGEGPGGEGSPESIALAAGHDADTPCLADALADPG 586 Query 545 SAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAG 604 A+GYS AGY RI ALA EL ALRG LGHSLPDLVAEVRR LGVDC+VRA+A + GWAG Sbjct 587 PADGYSAAGYRRITALAAELRALRGHLGHSLPDLVAEVRRALGVDCDVRAAAGANAGWAG 646 Query 605 PEHLDAFADVVAGYAER-----ASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDR 659 EHLDAFADVVAGYAER A+ R ASVAGLLA+LDVAE VENGLPPA A DR Sbjct 647 TEHLDAFADVVAGYAERVELAGAADRCPTASVAGLLAFLDVAETVENGLPPAPSVAARDR 706 Query 660 VQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIP 719 VQVLTVH+AKGLEWQVVAVAHLS GVFPS SR++WLTD AELPPLLRGDRA+AGA G+P Sbjct 707 VQVLTVHSAKGLEWQVVAVAHLSGGVFPSAASRTTWLTDAAELPPLLRGDRAAAGALGVP 766 Query 720 VLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTK 779 VLD SAV +RKQLSD ISEHRR LD+RRVDEERRLLYVAVTRAEDTLLVSGHHWG TG K Sbjct 767 VLDVSAVTNRKQLSDTISEHRRQLDQRRVDEERRLLYVAVTRAEDTLLVSGHHWGATGIK 826 Query 780 PRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAAR 839 PRGPS+FLCE+K++IDRSAAAG PCGVV+QWA APA + NPL DN +EA+WPADP A R Sbjct 827 PRGPSDFLCEIKNVIDRSAAAGAPCGVVDQWAPAPADGDPNPLRDNTVEAIWPADPPAGR 886 Query 840 RGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGL 899 RGDVERGA LVA AMS D +T D++ W+ DVDALLAERA +A P+R L Sbjct 887 RGDVERGADLVARAMSGDPQENTVDVEG--------WAADVDALLAERARSAE-PPSRAL 937 Query 900 PNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDL 959 P LSVS LV+L DP GA QRL RLP RPDPHA LG+AFHAWVQ+FYGAE LFDL DL Sbjct 938 PGQLSVSGLVDLARDPAGAAQRLRHRLPTRPDPHALLGNAFHAWVQRFYGAESLFDLADL 997 Query 960 PGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDG 1019 PGAAD ++GD EL AL+ AFT S WAARTP AVEVPFEMPIG+T+VRGRIDAVF DPDG Sbjct 998 PGAADADIGDTPELGALRAAFTESPWAARTPIAVEVPFEMPIGETLVRGRIDAVFADPDG 1057 Query 1020 GATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPD 1079 GATVVDWKTG+PP GP AMRQAAVQLAVYRLAWAAL G P SSVRTAFYYVR+ TV P Sbjct 1058 GATVVDWKTGEPPRGPEAMRQAAVQLAVYRLAWAALSGMPESSVRTAFYYVRARATVAPG 1117 Query 1080 ELPAPGELAMLL 1091 +LPAP ELA LL Sbjct 1118 DLPAPAELAGLL 1129 >gi|118618002|ref|YP_906334.1| ATP-dependent DNA helicase [Mycobacterium ulcerans Agy99] gi|118570112|gb|ABL04863.1| ATP-dependent DNA helicase [Mycobacterium ulcerans Agy99] Length=1101 Score = 1608 bits (4163), Expect = 0.0, Method: Compositional matrix adjust. Identities = 865/1101 (79%), Positives = 930/1101 (85%), Gaps = 26/1101 (2%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 RYSP E+A ALG+FPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP Sbjct 4 RYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 63 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAG--IGLGCGDPAACAPVVSTYHAFAGSLLRDY 126 GQVLGLTFTRKAAGQLLRRVRSRLARLAG +G+ G+ AA AP VSTYHAFAGSLLRD+ Sbjct 64 GQVLGLTFTRKAAGQLLRRVRSRLARLAGTTVGVAVGE-AAGAPTVSTYHAFAGSLLRDH 122 Query 127 GLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDT 186 GLLLP+EPDTRLLSETELWQLAF+VV+GY G LCT K+PAAVT+ V+RLWGQL EHLVDT Sbjct 123 GLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDT 182 Query 187 RALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGK 246 R LRDTH+ELERLVHALPAG QRD GP+QWLLRML TQT+RAELVPLLDAL ERM A K Sbjct 183 RQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLVTQTERAELVPLLDALHERMRAAK 242 Query 247 VMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGL 306 VMDF MQMA+AARLAAT PQVG +LR RYRVVLLDEYQDTGH+QR+ LS+LFGGGVDDGL Sbjct 243 VMDFGMQMAAAARLAATCPQVGGELRSRYRVVLLDEYQDTGHSQRIALSALFGGGVDDGL 302 Query 307 ALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGI 366 ALTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PAPVLEL TSWRNPP+AL +AN I Sbjct 303 ALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLANAI 362 Query 367 SAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPT 426 SAE RRRSVAV ALR RPDAP G VRCALL DVQAER+WIAD L+ YQRA ADGV PPT Sbjct 363 SAEPRRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPT 422 Query 427 AAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMR 486 AAVLVRRNADAA IAD L ARGIP EVVGLAGLLSIPEVA++VAMLRLV DPTAGAAAMR Sbjct 423 AAVLVRRNADAAPIADALVARGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMR 482 Query 487 VLTGPRWRLGARDLAALWRRALTLSG--ESPSTASPESIAMAASADADNPCLADAISDPG 544 VLTGPRWRLG D+AALWRRA+ L G + ++ SP ++A AA D D CLADAI DPG Sbjct 483 VLTGPRWRLGGSDVAALWRRAVALVGGPQVGASVSPGAVAAAAGPDTDTACLADAICDPG 542 Query 545 SAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAG 604 A+ YS AGY RIGALA EL+ALRG LGH LPDLVAEVRRVLG+DC+VRA+A SG WAG Sbjct 543 PADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRAAATASGAWAG 602 Query 605 PEHLDAFADVVAGYAER-----ASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDR 659 EHLDAFADVVA YAER SA S++ASV GLLAYLDVA VENGLPPA+LTVA D Sbjct 603 AEHLDAFADVVADYAERTAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDG 662 Query 660 VQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIP 719 VQVLTVHAAKGLEWQVVAVAHLS GVFPST SRSSWLTDP ELPPLLRGDRAS GA GIP Sbjct 663 VQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALGIP 722 Query 720 VLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTK 779 VLDTSAV +RKQLSD IS HR LD+RRVDEERRLLYV VTRAEDT+LVSGHHWG TG K Sbjct 723 VLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLK 782 Query 780 PRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAAR 839 PRGPS+FLCELKDII+RSAAAGDPCG V+QW AP ERNPL D+ +EAVWP DPLA R Sbjct 783 PRGPSDFLCELKDIIERSAAAGDPCGTVDQWDRAPVAGERNPLLDDVVEAVWPTDPLATR 842 Query 840 RGDVERGAALVAAAMSADL-------PGSTTDIDHPPRPGDAPWSTDVDALLAERAHAAR 892 RGDVERGA LVA A+SAD + DI+ W+ DVDALLAERA A Sbjct 843 RGDVERGARLVAEAISADAGVEAPAGGAAVADIEG--------WTADVDALLAERARAV- 893 Query 893 GAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAEL 952 G P R LPN LSVS LVEL DPVGARQRL+ RLP RPDPHA LG+ FH WVQQFYGAEL Sbjct 894 GPPTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNIFHTWVQQFYGAEL 953 Query 953 LFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDA 1012 LFDLGDLPGAAD +VG E+LA LQ AF S WAARTP AVEVPFEMP+GDTVVRGRIDA Sbjct 954 LFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDA 1013 Query 1013 VFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRS 1072 VF DPDGGATVVDWKTG+PP GP AMRQAAVQLAVYR+AWAALRGCP SSVRTAF+YVR+ Sbjct 1014 VFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRT 1073 Query 1073 GITVVPDELPAPGELAMLLTD 1093 G+TV+PDELP LA LL D Sbjct 1074 GVTVIPDELPDGMALAELLAD 1094 >gi|240172137|ref|ZP_04750796.1| ATP-dependent DNA helicase [Mycobacterium kansasii ATCC 12478] Length=1066 Score = 1605 bits (4157), Expect = 0.0, Method: Compositional matrix adjust. Identities = 852/1080 (79%), Positives = 914/1080 (85%), Gaps = 23/1080 (2%) Query 31 VIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQVLGLTFTRKAAGQLLRRVRS 90 +IAAPPGPLVVIAGAGAGKTETMAARVVWL+ANGYAEPGQVLGLTFTRKAAGQLLRRVRS Sbjct 1 MIAAPPGPLVVIAGAGAGKTETMAARVVWLIANGYAEPGQVLGLTFTRKAAGQLLRRVRS 60 Query 91 RLARLAGIGLGCGDPAAC----APVVSTYHAFAGSLLRDYGLLLPLEPDTRLLSETELWQ 146 RLARLAG+ G AAC PVVSTYHAFAGSLLRDYGLLLP+EPDT LL+ETELWQ Sbjct 61 RLARLAGLEPGA---AACESAGTPVVSTYHAFAGSLLRDYGLLLPVEPDTSLLTETELWQ 117 Query 147 LAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTRALRDTHVELERLVHALPAG 206 LAF+VV+GY G L T K+PAAVT++V+RLWGQL EHLVDT LRDTHVELERLVH LP G Sbjct 118 LAFEVVNGYRGELRTQKTPAAVTAMVLRLWGQLAEHLVDTGQLRDTHVELERLVHTLPPG 177 Query 207 RYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKVMDFAMQMASAARLAATSPQ 266 YQRDR PSQWLLRMLATQ +RAELVPLLDAL ERM A KVMDF +QMASAARLAA+ PQ Sbjct 178 PYQRDRAPSQWLLRMLATQNERAELVPLLDALLERMRAEKVMDFGLQMASAARLAASFPQ 237 Query 267 VGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLALTAVGDPIQSIYGWRGASA 326 VG++LR ++RVVLLDEYQDTGH+QRV LSSLFGGGVDDGLALTAVGDPIQSIYGWRGASA Sbjct 238 VGRELRNQFRVVLLDEYQDTGHSQRVALSSLFGGGVDDGLALTAVGDPIQSIYGWRGASA 297 Query 327 TNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGISAEARRRSVAVRALRPRPDA 386 TNLPRFTTDFPLSDGTPAP+LEL TSWRNPP+AL +AN ISAEARRRSVAVRALR RPDA Sbjct 298 TNLPRFTTDFPLSDGTPAPILELRTSWRNPPRALHLANAISAEARRRSVAVRALRARPDA 357 Query 387 PPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTAAVLVRRNADAAAIADTLRA 446 PPG VRCALLPDVQAER+WIADHL+ RY RA ADGV PPTAAVLVRRNADAA IAD LRA Sbjct 358 PPGTVRCALLPDVQAERDWIADHLQRRYLRARADGVGPPTAAVLVRRNADAAPIADALRA 417 Query 447 RGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRVLTGPRWRLGARDLAALWRR 506 RGIP EVVGLAGLLSIPEVA+VVAMLRLVA+PTAG AAM+VLTGPRWRLG RDLAALWRR Sbjct 418 RGIPVEVVGLAGLLSIPEVADVVAMLRLVAEPTAGTAAMQVLTGPRWRLGGRDLAALWRR 477 Query 507 ALTLSGESPSTASPESIAMAASADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSA 566 AL L+G P+ +SPESIA AA D+D PCLADA+SDPG A+ YS AGY RI ALAGEL Sbjct 478 ALGLAG-GPNESSPESIAAAAGPDSDTPCLADALSDPGPADCYSAAGYRRIVALAGELKL 536 Query 567 LRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGPEHLDAFADVVAGYAERASARS 626 LR +LGH LPDLVAEVRRVLGVDCE RA + + W+G EHLDAF+DVVA YAERA++ Sbjct 537 LRAQLGHCLPDLVAEVRRVLGVDCEARAKSAATAEWSGTEHLDAFSDVVAKYAERATSSC 596 Query 627 SE----ASVAGLLAYLDVAEVVENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLS 682 +E ASVAGLLAYLDVA VENGLPPA+ VA DRVQVLTVHAAKGLEWQVVAVAHLS Sbjct 597 TEVPAKASVAGLLAYLDVAAEVENGLPPAQPAVARDRVQVLTVHAAKGLEWQVVAVAHLS 656 Query 683 RGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRKQLSDKISEHRRL 742 GVFPST SRS+WLTDP ELPPLLRGDR S G GIPVLDTSAV +RKQLSDKISEHRR Sbjct 657 GGVFPSTASRSTWLTDPGELPPLLRGDRVSTGVLGIPVLDTSAVTNRKQLSDKISEHRRQ 716 Query 743 LDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGD 802 LD+RRVDEERRLLYV VTRAEDTLLVSGH WG TG KP GPSEFLCE+KDIID S AAGD Sbjct 717 LDQRRVDEERRLLYVGVTRAEDTLLVSGHQWGATGVKPCGPSEFLCEVKDIIDHSVAAGD 776 Query 803 PCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMSAD-LPGS 861 PCG+V+QWA APA ERNPL DNAI+AVWPA+PL ARR DVERGA LVA A +A+ + Sbjct 777 PCGIVDQWAPAPAEGERNPLRDNAIQAVWPAEPLGARRADVERGARLVAEATAAEVIDAG 836 Query 862 TTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQR 921 D + W DVDALLAERA A + PAR LP LSVS LVEL DP ARQR Sbjct 837 VADTEG--------WVQDVDALLAERARAVQ-PPARELPGQLSVSGLVELGRDPAKARQR 887 Query 922 LMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFT 981 L RLP RPDP A LG+AFH+WVQ+FYGAELLFDLGDLPGAAD EV + EELA L+ AFT Sbjct 888 LAHRLPSRPDPQALLGNAFHSWVQRFYGAELLFDLGDLPGAADPEVSNAEELAKLRAAFT 947 Query 982 ASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQA 1041 AS WAARTP AVEVPFEMP+GDTVVRGRIDAVF DPDGG TVVDWKTG+PP GP RQA Sbjct 948 ASPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFADPDGGVTVVDWKTGEPPRGPEGRRQA 1007 Query 1042 AVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAMLLTDCAGRRSDT 1101 AVQLAVYRLAWAAL GC SSVRTAFYYVRSGITVVPDELP LA LL D A RR DT Sbjct 1008 AVQLAVYRLAWAALLGCSESSVRTAFYYVRSGITVVPDELPDGAALAALLADSA-RRCDT 1066 >gi|336459532|gb|EGO38469.1| DNA/RNA helicase, superfamily I [Mycobacterium avium subsp. paratuberculosis S397] Length=1096 Score = 1565 bits (4052), Expect = 0.0, Method: Compositional matrix adjust. Identities = 853/1102 (78%), Positives = 917/1102 (84%), Gaps = 26/1102 (2%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 RYSP ELACALGLFPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL+ANGYA P Sbjct 4 RYSPRELACALGLFPPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLIANGYAHP 63 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPA------ACAPVVSTYHAFAGSL 122 GQVLGLTFTRKAAGQLLRRVRSRLARLAG+GLG P APVVSTYHAFAGSL Sbjct 64 GQVLGLTFTRKAAGQLLRRVRSRLARLAGVGLGAASPNHGAVDPEAAPVVSTYHAFAGSL 123 Query 123 LRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEH 182 LRDYGLLLP+EPDTRLLSETELWQLAFDVV+ Y G L TDK+PAAVTS+V+RLWGQL EH Sbjct 124 LRDYGLLLPVEPDTRLLSETELWQLAFDVVNRYRGPLRTDKTPAAVTSMVLRLWGQLAEH 183 Query 183 LVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERM 242 LVDT LR+TH+ELERLVHALPAG YQRDRGPSQWLLR+ TQ++RAELVPLL+AL ERM Sbjct 184 LVDTSQLRETHLELERLVHALPAGPYQRDRGPSQWLLRLSGTQSERAELVPLLEALDERM 243 Query 243 HAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGV 302 A KVMDF MQMASAARL A PQVG DLR RYRVVLLDEYQDTGHAQR+ LS+LFGGGV Sbjct 244 RAVKVMDFGMQMASAARLVAAFPQVGADLRGRYRVVLLDEYQDTGHAQRIALSALFGGGV 303 Query 303 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRV 362 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFP SDGTPAPVLEL TSWRNPP+ LRV Sbjct 304 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPRSDGTPAPVLELRTSWRNPPRTLRV 363 Query 363 ANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGV 422 AN ISAEARRRSVAV ALRPRPDAPPG VRCALLPDV AEREWIADH+ Y+RA ADGV Sbjct 364 ANAISAEARRRSVAVHALRPRPDAPPGTVRCALLPDVVAEREWIADHIDAHYRRARADGV 423 Query 423 KPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGA 482 PPTAAVLVRRNADAA IAD LRARGIP EVVGLAGLLS+PEVAE+VAMLRLVADPTAGA Sbjct 424 SPPTAAVLVRRNADAAPIADALRARGIPVEVVGLAGLLSVPEVAELVAMLRLVADPTAGA 483 Query 483 AAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASAD-----ADNPCLA 537 AAMRVLTGPRWRLGARDLAALW+RA L G + + A+A++AD AD CLA Sbjct 484 AAMRVLTGPRWRLGARDLAALWQRARALGGAGTAGGPATAEAIASAADPRNVEADAVCLA 543 Query 538 DAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAP 597 DAI+DPG AEGYS AGY RI ALA ELSALR L H L DLVA VRRV+ +DCEVRA+A Sbjct 544 DAIADPGPAEGYSAAGYARIAALAAELSALRAHLDHPLGDLVAVVRRVMDLDCEVRAAAA 603 Query 598 VSGGWAGPEHLDAFADVVAGYAERASA----RSSEASVAGLLAYLDVAEVVENGLPPAEL 653 AG EHLDAFADVVAGYAERA S+ ASVAGLLA+LDVAE VENGLP A L Sbjct 604 AGW--AGTEHLDAFADVVAGYAERADTGGTDASASASVAGLLAFLDVAESVENGLPAAPL 661 Query 654 TVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASA 713 VA DRVQVLTVH+AKGLEWQ+VAVAHLS GVFPST ++++WLTD AELPPLLRGDRA Sbjct 662 AVARDRVQVLTVHSAKGLEWQLVAVAHLSGGVFPSTTAKTTWLTDAAELPPLLRGDRARP 721 Query 714 GAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHW 773 GA GIPVLDTS V +RKQLSDKISEHRR L++RRVDEERRLLYVAVTRAEDTLLVSGHHW Sbjct 722 GALGIPVLDTSDVTNRKQLSDKISEHRRQLEQRRVDEERRLLYVAVTRAEDTLLVSGHHW 781 Query 774 GPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPA 833 TG KPRGPS+FLCE+KD+ID SAAAGDPCG VEQWA APA ERNPL DNA+EAVWPA Sbjct 782 AATGIKPRGPSDFLCEIKDVIDASAAAGDPCGTVEQWAPAPADGERNPLRDNAVEAVWPA 841 Query 834 DPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARG 893 DPLA+RRG+VERGAALV AM+A+ D++ W+ DVDALLAERA G Sbjct 842 DPLASRRGEVERGAALVRQAMAAEPGDPGADVEG--------WAADVDALLAERARVT-G 892 Query 894 APARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELL 953 P + LP LSVSSLV L DP GA +RL RLP RP+PHA LG+AFHAWVQ+FYGAE L Sbjct 893 PPPQALPGQLSVSSLVGLARDPAGAARRLRHRLPSRPEPHALLGNAFHAWVQKFYGAECL 952 Query 954 FDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAV 1013 F+LGDLPGAAD +VGD ELA LQ AF S WAARTP AVEVPFEMPIGDT+VRGRIDAV Sbjct 953 FELGDLPGAADSDVGDTAELAELQAAFLESPWAARTPVAVEVPFEMPIGDTLVRGRIDAV 1012 Query 1014 FVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSG 1073 F + DGGATVVDWKTG PP P AMRQAAVQLAVYRLAWAAL P SSVRTAF+YVR+ Sbjct 1013 FAESDGGATVVDWKTGAPPDSPEAMRQAAVQLAVYRLAWAALAKVPESSVRTAFHYVRAR 1072 Query 1074 ITVVPDELPAPGELAMLLTDCA 1095 TVVP+ LP ELA LL A Sbjct 1073 TTVVPEALPTSDELAGLLAPTA 1094 >gi|41409398|ref|NP_962234.1| hypothetical protein MAP3300c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398229|gb|AAS05850.1| hypothetical protein MAP_3300c [Mycobacterium avium subsp. paratuberculosis K-10] Length=1096 Score = 1564 bits (4049), Expect = 0.0, Method: Compositional matrix adjust. Identities = 852/1102 (78%), Positives = 916/1102 (84%), Gaps = 26/1102 (2%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 RYSP ELACALGLFPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL+ANGYA P Sbjct 4 RYSPRELACALGLFPPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLIANGYAHP 63 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPA------ACAPVVSTYHAFAGSL 122 GQVLGLTFTRKAAGQLLRRVRSRLARLAG+GLG P APVVSTYHAFAGSL Sbjct 64 GQVLGLTFTRKAAGQLLRRVRSRLARLAGVGLGAASPNHGAVDPEAAPVVSTYHAFAGSL 123 Query 123 LRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEH 182 LRDYGLLLP+EPDTRLLSETELWQLAFDVV+ Y G L TDK+PAAVTS+V+RLWGQL EH Sbjct 124 LRDYGLLLPVEPDTRLLSETELWQLAFDVVNRYRGPLRTDKTPAAVTSMVLRLWGQLAEH 183 Query 183 LVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERM 242 LVDT LR+TH+ELERLVHALPAG YQRDRGPSQWLLR+ TQ++RAELVPLL+AL ERM Sbjct 184 LVDTSQLRETHLELERLVHALPAGPYQRDRGPSQWLLRLSGTQSERAELVPLLEALDERM 243 Query 243 HAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGV 302 A KVMDF MQMASAARL A PQVG DLR RYRVVLLDEYQDTGHAQR+ LS+LF GGV Sbjct 244 RAVKVMDFGMQMASAARLVAAFPQVGADLRGRYRVVLLDEYQDTGHAQRIALSALFAGGV 303 Query 303 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRV 362 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFP SDGTPAPVLEL TSWRNPP+ LRV Sbjct 304 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPRSDGTPAPVLELRTSWRNPPRTLRV 363 Query 363 ANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGV 422 AN ISAEARRRSVAV ALRPRPDAPPG VRCALLPDV AEREWIADH+ Y+RA ADGV Sbjct 364 ANAISAEARRRSVAVHALRPRPDAPPGTVRCALLPDVVAEREWIADHIDAHYRRARADGV 423 Query 423 KPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGA 482 PPTAAVLVRRNADAA IAD LRARGIP EVVGLAGLLS+PEVAE+VAMLRLVADPTAGA Sbjct 424 SPPTAAVLVRRNADAAPIADALRARGIPVEVVGLAGLLSVPEVAELVAMLRLVADPTAGA 483 Query 483 AAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASAD-----ADNPCLA 537 AAMRVLTGPRWRLGARDLAALW+RA L G + + A+A++AD AD CLA Sbjct 484 AAMRVLTGPRWRLGARDLAALWQRARALGGAGTAGGPATAEAIASAADPRNVEADAVCLA 543 Query 538 DAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAP 597 DAI+DPG AEGYS AGY RI ALA ELSALR L H L DLVA VRRV+ +DCEVRA+A Sbjct 544 DAIADPGPAEGYSAAGYARIAALAAELSALRAHLDHPLGDLVAVVRRVMDLDCEVRAAAA 603 Query 598 VSGGWAGPEHLDAFADVVAGYAERASA----RSSEASVAGLLAYLDVAEVVENGLPPAEL 653 AG EHLDAFADVVAGYAERA S+ ASVAGLLA+LDVAE VENGLP A L Sbjct 604 AGW--AGTEHLDAFADVVAGYAERADTGGTDASASASVAGLLAFLDVAESVENGLPAAPL 661 Query 654 TVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASA 713 VA DRVQVLTVH+AKGLEWQ+VAVAHLS GVFPST ++++WLTD AELPPLLRGDRA Sbjct 662 AVARDRVQVLTVHSAKGLEWQLVAVAHLSGGVFPSTTAKTTWLTDAAELPPLLRGDRARP 721 Query 714 GAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHW 773 GA GIPVLDTS V +RKQLSDKISEHRR L++RRVDEERRLLYVAVTRAEDTLLVSGHHW Sbjct 722 GALGIPVLDTSDVTNRKQLSDKISEHRRQLEQRRVDEERRLLYVAVTRAEDTLLVSGHHW 781 Query 774 GPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPA 833 TG KPRGPS+FLCE+KD+ID SAAAGDPCG VEQWA APA ERNPL DNA+EAVWPA Sbjct 782 AATGIKPRGPSDFLCEIKDVIDASAAAGDPCGTVEQWAPAPADGERNPLRDNAVEAVWPA 841 Query 834 DPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARG 893 DPLA+RRG+VERGAALV AM+A+ D++ W+ DVDALLAERA G Sbjct 842 DPLASRRGEVERGAALVRQAMAAEPGDPGADVEG--------WAADVDALLAERARVT-G 892 Query 894 APARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELL 953 P + LP LSVSSLV L DP GA +RL RLP RP+PHA LG+AFHAWVQ+FYGAE L Sbjct 893 PPPQALPGQLSVSSLVGLARDPAGAARRLRHRLPSRPEPHALLGNAFHAWVQKFYGAECL 952 Query 954 FDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAV 1013 F+LGDLPGAAD +VGD ELA LQ AF S WAARTP AVEVPFEMPIGDT+VRGRIDAV Sbjct 953 FELGDLPGAADSDVGDTAELAELQAAFLESPWAARTPVAVEVPFEMPIGDTLVRGRIDAV 1012 Query 1014 FVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSG 1073 F + DGGATVVDWKTG PP P AMRQAAVQLAVYRLAWAAL P SSVRTAF+YVR+ Sbjct 1013 FAESDGGATVVDWKTGAPPDSPEAMRQAAVQLAVYRLAWAALAKVPESSVRTAFHYVRAR 1072 Query 1074 ITVVPDELPAPGELAMLLTDCA 1095 TVVP+ LP ELA LL A Sbjct 1073 TTVVPEALPTSDELAGLLAPTA 1094 >gi|254776585|ref|ZP_05218101.1| hypothetical protein MaviaA2_18221 [Mycobacterium avium subsp. avium ATCC 25291] Length=1139 Score = 1551 bits (4015), Expect = 0.0, Method: Compositional matrix adjust. Identities = 853/1102 (78%), Positives = 917/1102 (84%), Gaps = 26/1102 (2%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 RYSP ELACAL LFPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL+ANGYA P Sbjct 47 RYSPRELACALALFPPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLIANGYAHP 106 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPA------ACAPVVSTYHAFAGSL 122 GQVLGLTFTRKAAGQLLRRVRSRLARLAG+GLG P APVVSTYHAFAGSL Sbjct 107 GQVLGLTFTRKAAGQLLRRVRSRLARLAGVGLGAASPNHGAVDPEAAPVVSTYHAFAGSL 166 Query 123 LRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEH 182 LRDYGLLLP+EPDTRLLSETELWQLAFDVV+ Y G L TDK+PAAVTS+V+RLWGQL EH Sbjct 167 LRDYGLLLPVEPDTRLLSETELWQLAFDVVNRYRGPLRTDKTPAAVTSMVLRLWGQLAEH 226 Query 183 LVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERM 242 LVDT LR+TH+ELERLVHALPAG YQRDRGPSQWLLR+ TQ++RAELVPLL+AL ERM Sbjct 227 LVDTSQLRETHLELERLVHALPAGPYQRDRGPSQWLLRLSGTQSERAELVPLLEALDERM 286 Query 243 HAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGV 302 A KVMDF MQMASAARLAA PQVG DLR RYRVVLLDEYQDTGHAQR+ LS+LFGGGV Sbjct 287 RAVKVMDFGMQMASAARLAAAFPQVGADLRGRYRVVLLDEYQDTGHAQRIALSALFGGGV 346 Query 303 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRV 362 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFP SDGTPAPVLEL TSWRNPP+ LRV Sbjct 347 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPRSDGTPAPVLELRTSWRNPPRTLRV 406 Query 363 ANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGV 422 AN ISAEARRRSVAV ALRPRPDAPPG VRCALLPDV AER+WIADH+ Y+RA ADGV Sbjct 407 ANAISAEARRRSVAVHALRPRPDAPPGTVRCALLPDVVAERQWIADHIDAHYRRARADGV 466 Query 423 KPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGA 482 PPTAAVLVRRNADAA IAD LRARGIP EVVGLAGLLS+PEVAE+VAMLRLVADPTAGA Sbjct 467 SPPTAAVLVRRNADAAPIADALRARGIPVEVVGLAGLLSVPEVAELVAMLRLVADPTAGA 526 Query 483 AAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASAD-----ADNPCLA 537 AAMRVLTGPRWRLGARDLAALW+RA L G + + A+A++AD AD CLA Sbjct 527 AAMRVLTGPRWRLGARDLAALWQRARALGGAGAAGGPATAEAIASAADPRNVEADAVCLA 586 Query 538 DAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAP 597 DAI+DPG AEGYS AGY RI ALA ELSALR L L DLVAEVRRV+G+DCEVRA+A Sbjct 587 DAIADPGPAEGYSAAGYARIAALAAELSALRAHLDQPLGDLVAEVRRVVGLDCEVRAAAA 646 Query 598 VSGGWAGPEHLDAFADVVAGYAERASA----RSSEASVAGLLAYLDVAEVVENGLPPAEL 653 AG EHLDAFADVVAGYAERA S+ ASVAGLLA+LDVAE VENGLP A L Sbjct 647 AGW--AGTEHLDAFADVVAGYAERADTGGTDASASASVAGLLAFLDVAESVENGLPAAPL 704 Query 654 TVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASA 713 VA DRVQVLTVH+AKGLEWQ+VAVA LS GVFPST ++++WLTD AELPPLLRGDRA Sbjct 705 AVARDRVQVLTVHSAKGLEWQLVAVARLSGGVFPSTTAKTTWLTDAAELPPLLRGDRARP 764 Query 714 GAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHW 773 GA GIPVLDTS V +RKQLSDKISEHRR L++RRVDEERRLLYVAVTRAEDTLLVSGHHW Sbjct 765 GALGIPVLDTSDVTNRKQLSDKISEHRRQLEQRRVDEERRLLYVAVTRAEDTLLVSGHHW 824 Query 774 GPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPA 833 TG KPRGPS+FLCE+KD+ID SAAAGDPCG VEQWASAPA ERNPL DN +EAVWPA Sbjct 825 AATGIKPRGPSDFLCEIKDVIDASAAAGDPCGTVEQWASAPADGERNPLRDNVVEAVWPA 884 Query 834 DPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARG 893 DPLA+RRG+VERGAALV AM+A+ D++ W+ DVDALLAERA G Sbjct 885 DPLASRRGEVERGAALVRQAMAAEPGDPGADVEG--------WAADVDALLAERARVT-G 935 Query 894 APARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELL 953 P + LP LSVSSLV L DP GA QRL RLP RP+PHA LG+AFHAWVQ+FYGAE L Sbjct 936 PPPQVLPGQLSVSSLVGLARDPAGAAQRLRHRLPSRPEPHALLGNAFHAWVQKFYGAECL 995 Query 954 FDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAV 1013 F+LGDLPGAAD +VGD ELA LQ AF S WAARTP AVEVPFEMPIGDT+VRGRIDAV Sbjct 996 FELGDLPGAADSDVGDTAELAELQAAFLESPWAARTPVAVEVPFEMPIGDTLVRGRIDAV 1055 Query 1014 FVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSG 1073 F + DGGATVVDWKTG PP P AMRQAAVQLAVYRLAWAAL P SSVRTAF+YVR+ Sbjct 1056 FAESDGGATVVDWKTGAPPDSPEAMRQAAVQLAVYRLAWAALAKVPESSVRTAFHYVRAR 1115 Query 1074 ITVVPDELPAPGELAMLLTDCA 1095 TVVP+ LP ELA LL A Sbjct 1116 TTVVPEALPTSDELAGLLAPTA 1137 >gi|118467070|ref|YP_883295.1| superfamily protein I DNA and RNA helicases [Mycobacterium avium 104] gi|118168357|gb|ABK69254.1| superfamily protein I DNA and RNA helicases [Mycobacterium avium 104] Length=1096 Score = 1544 bits (3998), Expect = 0.0, Method: Compositional matrix adjust. Identities = 850/1102 (78%), Positives = 915/1102 (84%), Gaps = 26/1102 (2%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 RYSP ELACALGLFPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL+ANGYA P Sbjct 4 RYSPRELACALGLFPPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLIANGYAHP 63 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPA------ACAPVVSTYHAFAGSL 122 GQVLGLTFTRKAAGQLLRRVRSRLARLAG+GLG P APVVSTYHAFAGSL Sbjct 64 GQVLGLTFTRKAAGQLLRRVRSRLARLAGVGLGAASPNHGAVDPEAAPVVSTYHAFAGSL 123 Query 123 LRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEH 182 LRDYGLLLP+EPDTRLLSETELWQLAFDVV+ Y G L TDK+PAAVTS+V+RLWGQL EH Sbjct 124 LRDYGLLLPVEPDTRLLSETELWQLAFDVVNRYRGPLRTDKTPAAVTSMVLRLWGQLAEH 183 Query 183 LVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERM 242 LVDT LR+TH+ELERLVHALPAG YQRDRGPSQWL R+ TQ++RAELVPLL+AL ERM Sbjct 184 LVDTSQLRETHLELERLVHALPAGPYQRDRGPSQWLRRLSGTQSERAELVPLLEALDERM 243 Query 243 HAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGV 302 A KVMDF MQMASAARLAA PQVG DLR RYRVVLLDEYQDTGHAQR+ LS+LFGGGV Sbjct 244 RAVKVMDFGMQMASAARLAAAFPQVGADLRGRYRVVLLDEYQDTGHAQRIALSALFGGGV 303 Query 303 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRV 362 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFP SDGTPAPVLEL TSWRNPP+ LRV Sbjct 304 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPRSDGTPAPVLELRTSWRNPPRTLRV 363 Query 363 ANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGV 422 AN ISAEARRRSVAV AL PRPDAPPG VRCALLPD+ AEREWIADH+ Y+RA ADGV Sbjct 364 ANAISAEARRRSVAVHALCPRPDAPPGTVRCALLPDMVAEREWIADHIDAHYRRARADGV 423 Query 423 KPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGA 482 PPTAAVLVRRNADAA IAD LRARGIP EVVGLAGLLS+PEVAE+VAMLRLVADPTAGA Sbjct 424 SPPTAAVLVRRNADAAPIADALRARGIPVEVVGLAGLLSVPEVAELVAMLRLVADPTAGA 483 Query 483 AAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASAD-----ADNPCLA 537 AAMRVLTGPRWRLGARDLAALW+RA L G + + A+A++AD AD CLA Sbjct 484 AAMRVLTGPRWRLGARDLAALWQRARALGGAGTAGGPATAEAIASAADPRNVEADAVCLA 543 Query 538 DAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAP 597 DAI+DPG AEGYS AGY RI ALA ELSALR L H L DLVAEVRRV+ +DCEVRA+A Sbjct 544 DAIADPGPAEGYSAAGYARIAALAAELSALRAHLDHPLGDLVAEVRRVMDLDCEVRAAAA 603 Query 598 VSGGWAGPEHLDAFADVVAGYAERASA----RSSEASVAGLLAYLDVAEVVENGLPPAEL 653 AG EHLDAFADVVAGYAERA S+ ASVAGLLA+LDVAE VENGLP A L Sbjct 604 AGW--AGTEHLDAFADVVAGYAERADTGGTDASASASVAGLLAFLDVAESVENGLPAAPL 661 Query 654 TVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASA 713 VA DRVQVLTVH+AKGLEWQ+VAVAHLS GVFPST ++++WLTD AELPPLLRGDRA Sbjct 662 AVARDRVQVLTVHSAKGLEWQLVAVAHLSGGVFPSTTAKTTWLTDAAELPPLLRGDRARP 721 Query 714 GAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHW 773 GA GIPVLDTS V +RKQLSDKISEHRR L++RRVDEERRLLYVAVTRAEDTLLVSGHHW Sbjct 722 GALGIPVLDTSDVTNRKQLSDKISEHRRQLEQRRVDEERRLLYVAVTRAEDTLLVSGHHW 781 Query 774 GPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPA 833 TG KPRGPS+FLCE+KD+ID SAAAGDPCG VEQWA APA ERNPL DNA+EAVWPA Sbjct 782 AATGIKPRGPSDFLCEIKDVIDASAAAGDPCGTVEQWAPAPADGERNPLRDNAVEAVWPA 841 Query 834 DPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARG 893 DPLA+RRG+VERGAALV AM+A+ D++ W+ DVDALL ERA G Sbjct 842 DPLASRRGEVERGAALVRQAMAAEPGDPGADVEG--------WAADVDALLVERARVT-G 892 Query 894 APARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELL 953 P + LP LSVSSLV L DP A QRL RLP RP+PHA LG+AFHAWVQ+FYGAE L Sbjct 893 PPPQVLPGQLSVSSLVGLARDPARAAQRLRHRLPSRPEPHALLGNAFHAWVQKFYGAECL 952 Query 954 FDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAV 1013 F+LGDLPGAAD +VGD ELA LQ AF S WAARTP AVEVPFEMPIGDT+VRGRIDAV Sbjct 953 FELGDLPGAADSDVGDTAELAELQAAFLESPWAARTPVAVEVPFEMPIGDTLVRGRIDAV 1012 Query 1014 FVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSG 1073 F + DGGATVVDWKTG PP P AMRQAAVQLAVYRLAWAAL P SSVRTAF+YVR+ Sbjct 1013 FAESDGGATVVDWKTGAPPDSPEAMRQAAVQLAVYRLAWAALAKVPESSVRTAFHYVRAR 1072 Query 1074 ITVVPDELPAPGELAMLLTDCA 1095 TVVP+ LP +LA LL A Sbjct 1073 TTVVPEALPTSDQLAGLLAPTA 1094 >gi|298526678|ref|ZP_07014087.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis 94_M4241A] gi|298496472|gb|EFI31766.1| ATP-dependent DNA helicase [Mycobacterium tuberculosis 94_M4241A] Length=921 Score = 1439 bits (3725), Expect = 0.0, Method: Compositional matrix adjust. Identities = 759/759 (100%), Positives = 759/759 (100%), Gaps = 0/759 (0%) Query 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL Sbjct 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 Query 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG Sbjct 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG Sbjct 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE Sbjct 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG Sbjct 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL Sbjct 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD Sbjct 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA Sbjct 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI Sbjct 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 Query 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG Sbjct 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 Query 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV Sbjct 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV Sbjct 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAV 759 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAV Sbjct 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAV 759 >gi|333991556|ref|YP_004524170.1| ATP-dependent DNA helicase [Mycobacterium sp. JDM601] gi|333487524|gb|AEF36916.1| ATP-dependent DNA helicase [Mycobacterium sp. JDM601] Length=1143 Score = 1431 bits (3703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 796/1135 (71%), Positives = 865/1135 (77%), Gaps = 60/1135 (5%) Query 8 ARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 67 ARY PAELA ALGL PT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYA+ Sbjct 3 ARYDPAELAAALGLHQPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAD 62 Query 68 PGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPA-------ACAPVVSTYHAFAG 120 PGQVLGLTFTRKAAGQLLRRVRSRLARLAG GL +P + P VSTYHAFAG Sbjct 63 PGQVLGLTFTRKAAGQLLRRVRSRLARLAGTGLLIPEPGFAGSAGGSATPTVSTYHAFAG 122 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 +LLR++GLLL +EPDTRLL+ET LWQLAFDVVSGY G L TD+ PAA+T++V+RL GQL Sbjct 123 ALLREHGLLLGIEPDTRLLTETGLWQLAFDVVSGYPGELRTDRDPAAITAMVLRLAGQLA 182 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 EHLVDT ALRDTH+ELERLVH LP G QR P+Q LL+ML TQT+RA LVPL+DAL + Sbjct 183 EHLVDTDALRDTHLELERLVHTLPPGPRQR-ADPNQSLLKMLDTQTERASLVPLIDALHQ 241 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 RM A +VMDF QMA+AARLA VG LR YRVVLLDEYQDTGHAQR+ LSSLFGG Sbjct 242 RMRAERVMDFGAQMATAARLARAGESVGAQLRATYRVVLLDEYQDTGHAQRIALSSLFGG 301 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 GVDDGLALTAVGDPIQSIYGWRGASATNLPRF TDFPLSDGTPAP LEL TSWRNPP+ L Sbjct 302 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFATDFPLSDGTPAPTLELRTSWRNPPEVL 361 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 VAN ISAEARRRSV V LRPRPDAPPG VR ALL DV AE W+A+ L+ RY++A AD Sbjct 362 HVANEISAEARRRSVTVHTLRPRPDAPPGGVRLALLADVAAEHRWVAEALQQRYRQAAAD 421 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 GV PPTAAVLVRRN+DAA A+ +RA GIP EVVGLAGLLS+PEVA+VVAMLRLV++PTA Sbjct 422 GVAPPTAAVLVRRNSDAAPFAEAIRACGIPVEVVGLAGLLSVPEVADVVAMLRLVSEPTA 481 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPES---IAMAASADADNPCLA 537 GAAAMRVLTG RWR GA DLAALWRRA L+ + A P S IA A D+D CLA Sbjct 482 GAAAMRVLTGARWRFGAADLAALWRRAAELA-RTDRVAGPFSAAEIAAQAGPDSDTACLA 540 Query 538 DAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAP 597 DA++DPG AE YS GY R+ ALA EL+ LRG L H LPDLVAEVRRV+G+DCEV A+ P Sbjct 541 DALADPGPAERYSATGYRRVTALAEELTVLRGHLCHPLPDLVAEVRRVMGLDCEVLAAPP 600 Query 598 VSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVAC 657 V+ G +G E LDAFADVVAGY E R +AS+ GLLAYLD A VVENGL PA VA Sbjct 601 VT-GVSGTEQLDAFADVVAGYVE---GRVGQASLPGLLAYLDAAAVVENGLAPAAPAVAA 656 Query 658 DRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGA-- 715 DRVQ+LTVHAAKGLEWQVVAV HL VFPST SR SWL+D AELPPLLRGDRA G Sbjct 657 DRVQILTVHAAKGLEWQVVAVPHLVARVFPSTASRRSWLSDAAELPPLLRGDRAEPGGSA 716 Query 716 ------------------------------------HGIPVLDTSAVADRKQLSDKISEH 739 HG+PVLDT AV +RKQLSD ISEH Sbjct 717 RLDGGEVKLGPPHQHRGSARLDEGEPKLGPPHGPGDHGVPVLDTGAVTNRKQLSDTISEH 776 Query 740 RRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAA 799 R LD+RRVDEERRLLYVAVTRAEDTLLVSGHHWG TKPRGPSEFL ELK +ID SAA Sbjct 777 LRRLDQRRVDEERRLLYVAVTRAEDTLLVSGHHWGAGETKPRGPSEFLTELKAVIDDSAA 836 Query 800 AGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMSADLP 859 AG PCG +EQWA APAG ERNPL DN E WP DPLA RR DVERGAALV+AA+ AD P Sbjct 837 AGTPCGSIEQWADAPAGGERNPLGDNVSEGNWPVDPLAGRRSDVERGAALVSAALRAD-P 895 Query 860 GSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGAR 919 + + R G WS DVDALLAERA A PAR LP+ +SVS LVEL DP+GA Sbjct 896 APDAEPVNGSRAGS--WSADVDALLAERARVA-AQPARTLPSQVSVSGLVELSRDPIGAA 952 Query 920 QRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLPG--AADREVGDPEELAALQ 977 QRL RLP RPDPHA LG AFH WVQ+FYGAE LF+L DLPG AD D EELA LQ Sbjct 953 QRLTRRLPARPDPHALLGTAFHDWVQRFYGAERLFELDDLPGAADADTARADAEELADLQ 1012 Query 978 RAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAA 1037 AF S WAAR+PAAVEVPFEM G TVVRGRIDAVF +PDGG TVVDWKTG P GP A Sbjct 1013 AAFLDSPWAARSPAAVEVPFEMTFGQTVVRGRIDAVFAEPDGGVTVVDWKTGAVPDGPEA 1072 Query 1038 MRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAMLLT 1092 R AAVQLAVYRLAWAAL CP S VR AF+YVR+G TVVPDELP ELA LLT Sbjct 1073 RRHAAVQLAVYRLAWAALTDCPESRVRAAFHYVRTGTTVVPDELPDAAELAALLT 1127 >gi|118472301|ref|YP_886308.1| ATP-dependent DNA helicase [Mycobacterium smegmatis str. MC2 155] gi|118173588|gb|ABK74484.1| ATP-dependent DNA helicase [Mycobacterium smegmatis str. MC2 155] Length=1087 Score = 1399 bits (3622), Expect = 0.0, Method: Compositional matrix adjust. Identities = 749/1087 (69%), Positives = 847/1087 (78%), Gaps = 20/1087 (1%) Query 8 ARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 67 ARYSP EL+ ALGLFPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANG+A Sbjct 3 ARYSPVELSAALGLFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGFAT 62 Query 68 PGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAAC-APVVSTYHAFAGSLLRDY 126 P QVLGLTFTRKAAGQLLRRVR+RLARLAG GL G A+ + VSTYHAFAG+LLR++ Sbjct 63 PSQVLGLTFTRKAAGQLLRRVRTRLARLAGAGLAPGSGASDESATVSTYHAFAGTLLREH 122 Query 127 GLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDT 186 GLLLP+EPDTRLLSETELWQLA+DVV + G L T+K+PAAVT++V+RL G L EHLVDT Sbjct 123 GLLLPVEPDTRLLSETELWQLAYDVVCAHPGHLDTEKTPAAVTAMVLRLSGALAEHLVDT 182 Query 187 RALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGK 246 LRDTHVELERLVH LPAG YQRDRGPSQWLLRMLATQT+R ELVPL+DAL +RM A K Sbjct 183 DQLRDTHVELERLVHTLPAGPYQRDRGPSQWLLRMLATQTERTELVPLIDALHQRMRAEK 242 Query 247 VMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGL 306 VMDF MQMA+AARLAA PQVG+ LR+R+RVVLLDEYQDTGHAQR+ LSSLFGGG DDGL Sbjct 243 VMDFGMQMAAAARLAARFPQVGEQLRQRFRVVLLDEYQDTGHAQRIALSSLFGGGADDGL 302 Query 307 ALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGI 366 ALTAVGDPIQSIYGWRGASATNLPRFTTDFP SDGTPAP LEL TSWRNPP L VAN + Sbjct 303 ALTAVGDPIQSIYGWRGASATNLPRFTTDFPYSDGTPAPTLELRTSWRNPPSTLHVANAV 362 Query 367 SAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPT 426 S EARRRSVAVRALRPRPDA PG +RCALL +V AER+W+ADHL Y A G PT Sbjct 363 SEEARRRSVAVRALRPRPDAEPGTIRCALLNNVAAERDWVADHLARAYHGAIGRGEAAPT 422 Query 427 AAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMR 486 AAVLVRRNADAA +A+ L ARG+P EVVG+AGLL++PEVA++VAMLRL+ADPTAG+A MR Sbjct 423 AAVLVRRNADAAPMAEALTARGVPVEVVGVAGLLAVPEVADLVAMLRLIADPTAGSAVMR 482 Query 487 VLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAISDPGSA 546 +LTGPRWR GARD+AALWRRA+ L I A+ DAD C+ADAI DPG A Sbjct 483 ILTGPRWRFGARDIAALWRRAVELDDRPKGELGTADIVAQAAPDADTACVADAICDPGDA 542 Query 547 EGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGPE 606 E YS AGY RI AL EL+ LR LGH LP+LVAEVRRVLG+D E RA+ PV+ GWAG E Sbjct 543 ERYSPAGYERIVALGRELTMLRAHLGHPLPELVAEVRRVLGLDAEARAARPVAAGWAGTE 602 Query 607 HLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRVQVLTVH 666 +LD F+D+V+ +A A ASV+ LLAYLD A VENGL PAELTV+ DRVQ+LTVH Sbjct 603 NLDRFSDLVSDFAGHAG-----ASVSALLAYLDAAVEVENGLAPAELTVSHDRVQILTVH 657 Query 667 AAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPVLDTSAV 726 AAKGLEWQVVAV HLS VFPST +WLTD ++LPPLLRGDRA+ G+PVLDTS + Sbjct 658 AAKGLEWQVVAVPHLSARVFPSTTQARTWLTDASDLPPLLRGDRATESEIGVPVLDTSDI 717 Query 727 ADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEF 786 DRK LSDKIS+H++ LD+RRVDEERRLLYVA+TRAEDTLL+SGHHWG T +KPRGPSEF Sbjct 718 YDRKILSDKISDHKKSLDQRRVDEERRLLYVAITRAEDTLLLSGHHWGATESKPRGPSEF 777 Query 787 LCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARRGDVERG 846 LCELK I++ + AAG PCG +E WA PA E NPL D +EA+WP P+A+ V RG Sbjct 778 LCELKTILEEATAAGTPCGEIEHWAPDPAPGETNPLRDQVVEALWP--PVASADDHVHRG 835 Query 847 AALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLPNHLSVS 906 A LVAAAM+ ++ W+ DVDALLAER + LP LSVS Sbjct 836 AQLVAAAMAGEVSAEA---------DQEGWAADVDALLAERERPPQQEDTE-LPGQLSVS 885 Query 907 SLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADRE 966 +LVEL DP A RL RLP+RPDPHA LG FH WVQ+++ AE LFDL DLPGA D + Sbjct 886 TLVELSRDPKAALTRLRRRLPQRPDPHALLGTTFHEWVQRYFHAERLFDLDDLPGAVDSD 945 Query 967 VGD--PEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVV 1024 G E LA LQ AF S WAARTP VEVPF+M +G+TVVRGRIDAVF +PDG V+ Sbjct 946 SGRAVEESLAELQDAFVKSPWAARTPVEVEVPFDMVLGETVVRGRIDAVFAEPDGTTMVL 1005 Query 1025 DWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDELPAP 1084 DWKTG PP P A AAVQLAVYRLAWAA+RGCP SVR AF+YVRSG TV+P+ LP Sbjct 1006 DWKTGDPPETPEAKEHAAVQLAVYRLAWAAMRGCPPESVRAAFHYVRSGQTVIPETLPGA 1065 Query 1085 GELAMLL 1091 EL LL Sbjct 1066 EELVKLL 1072 >gi|108798375|ref|YP_638572.1| UvrD/REP helicase [Mycobacterium sp. MCS] gi|119867472|ref|YP_937424.1| UvrD/REP helicase [Mycobacterium sp. KMS] gi|108768794|gb|ABG07516.1| UvrD/REP helicase [Mycobacterium sp. MCS] gi|119693561|gb|ABL90634.1| UvrD/REP helicase [Mycobacterium sp. KMS] Length=1091 Score = 1370 bits (3547), Expect = 0.0, Method: Compositional matrix adjust. Identities = 750/1082 (70%), Positives = 841/1082 (78%), Gaps = 23/1082 (2%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 RYSPAELA ALGLF PT EQAAVIAAPPGP+VVIAGAGAGKTETMAARVVWLVANGYA P Sbjct 4 RYSPAELASALGLFAPTDEQAAVIAAPPGPVVVIAGAGAGKTETMAARVVWLVANGYATP 63 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGL--GCGDPAACA---PVVSTYHAFAGSLL 123 GQVLGLTFTRKAAGQLLRRVR+RLARL+G GL G G A P VSTYHAFAG+LL Sbjct 64 GQVLGLTFTRKAAGQLLRRVRTRLARLSGAGLVPGIGPGLGAADDPPTVSTYHAFAGTLL 123 Query 124 RDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHL 183 RD+GLLLP+EP+TRLL ETELWQ A VV + G L DK+PAAVT +V+RL GQL EHL Sbjct 124 RDHGLLLPIEPETRLLGETELWQWAHRVVCEHPGPLEIDKTPAAVTDMVLRLAGQLAEHL 183 Query 184 VDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMH 243 VDT LRDTHVELERLVH LPAG YQRDRGPSQWLLRMLATQT+R EL+PL+DAL RM Sbjct 184 VDTDELRDTHVELERLVHTLPAGPYQRDRGPSQWLLRMLATQTERTELIPLVDALHRRMQ 243 Query 244 AGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVD 303 + KVMDF MQMA+AARLAA PQVG +LR RYRVVLLDEYQDTGHAQRV LS+LFGGGVD Sbjct 244 SEKVMDFGMQMAAAARLAAAHPQVGAELRARYRVVLLDEYQDTGHAQRVALSALFGGGVD 303 Query 304 DGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVA 363 DGLALTAVGDPIQSIYGWRGASATNLPRF TDFPLSDGTPA VLEL TSWRNPP L +A Sbjct 304 DGLALTAVGDPIQSIYGWRGASATNLPRFATDFPLSDGTPARVLELRTSWRNPPSTLHLA 363 Query 364 NGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVK 423 N +SAEAR+RSVAVR+LRPRP A PG +R ALL +V AER+W+AD + RY A A+ Sbjct 364 NAVSAEARQRSVAVRSLRPRPGAEPGTIRLALLDNVAAERDWVADEVASRYHAARAEDEA 423 Query 424 PPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAA 483 PPTAAVL+RRNADAA +A+ L ARG+P EVVGLAGLL + EVA+VVAMLRLVADPTAGAA Sbjct 424 PPTAAVLLRRNADAAPMAEALTARGVPVEVVGLAGLLGVAEVADVVAMLRLVADPTAGAA 483 Query 484 AMRVLTGPRWRLGARDLAALWRRALTLSGESPS-TASPESIAMAASADADNPCLADAISD 542 AMR +TGPRWRLG RD+AALWRRA+ L P A+ I A+ DAD CLADAI D Sbjct 484 AMRTVTGPRWRLGGRDIAALWRRAVELDDGGPGPEATAAEIVARAAPDADAACLADAICD 543 Query 543 PGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGW 602 PG AE YS GY RI AL EL++LRG LG +LPDLV EVRRVLGVD E RA+ PV GW Sbjct 544 PGPAEKYSPEGYRRIVALGRELTSLRGHLGIALPDLVTEVRRVLGVDVEARAAMPVPAGW 603 Query 603 AGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRVQV 662 +G EHLDAF DVVA YA R A+V GLLAYLD A ENGL PA+L V+ +RVQ+ Sbjct 604 SGTEHLDAFVDVVADYAGRPG-----ATVGGLLAYLDAAMERENGLAPADLAVSTERVQI 658 Query 663 LTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPVLD 722 LTVHAAKGLEWQVVAV HLS +FPST +WLTDPA+LPPLLRGDRA+ HG+PVLD Sbjct 659 LTVHAAKGLEWQVVAVPHLSGRIFPSTAQARTWLTDPADLPPLLRGDRATTTDHGVPVLD 718 Query 723 TSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRG 782 TS V DRK LSD+I++H+R L++RRVDEERRLLYVA+TRAEDTLL+SGHHWG T KPRG Sbjct 719 TSDVNDRKILSDRINDHKRRLEQRRVDEERRLLYVALTRAEDTLLLSGHHWGATEAKPRG 778 Query 783 PSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARRGD 842 PSEFL ELKDIIDR+ AG PCGVV+QWA APA E+NPL DN E +WPADP RR Sbjct 779 PSEFLEELKDIIDRAEQAGQPCGVVDQWAPAPADGEKNPLRDNVKEVLWPADPAGGRRTA 838 Query 843 VERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLPNH 902 V+RGA LVA AM+ + + D+D W+ DVDALLAER AA+ P LP Sbjct 839 VDRGAQLVARAMAGAV-QTDQDVDG--------WAADVDALLAERERAAQKPPLT-LPAE 888 Query 903 LSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLPGA 962 +SVS+LV L DP R+ R+P RPDP+A LG AFH WVQ+++GAE LFDL DLPGA Sbjct 889 VSVSTLVNLSDDPATVLSRINRRVPTRPDPNASLGTAFHDWVQRYFGAERLFDLDDLPGA 948 Query 963 ADREV--GDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 D + + E+L LQ AF S WAARTP VEVPF+M IG+T+VRGRIDAVF D DGG Sbjct 949 VDSDTRRAEAEQLTELQTAFMLSPWAARTPIDVEVPFDMVIGETMVRGRIDAVFADDDGG 1008 Query 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 AT+VDWKTG P PAA AA+QLAVYRLAWA L GCP VR AF+YVR T+ P Sbjct 1009 ATIVDWKTGAAPDTPAAAEHAAIQLAVYRLAWAQLSGCPVERVRAAFHYVRPNQTLRPAG 1068 Query 1081 LP 1082 LP Sbjct 1069 LP 1070 >gi|126434059|ref|YP_001069750.1| UvrD/REP helicase [Mycobacterium sp. JLS] gi|126233859|gb|ABN97259.1| UvrD/REP helicase [Mycobacterium sp. JLS] Length=1091 Score = 1368 bits (3541), Expect = 0.0, Method: Compositional matrix adjust. Identities = 750/1087 (69%), Positives = 843/1087 (78%), Gaps = 31/1087 (2%) Query 8 ARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 67 ARYSPAELA ALGLF PT EQAAVIAAPPGP+VVIAGAGAGKTETMAARVVWLVANGYA Sbjct 3 ARYSPAELASALGLFAPTDEQAAVIAAPPGPVVVIAGAGAGKTETMAARVVWLVANGYAT 62 Query 68 PGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGL--GCG-------DPAACAPVVSTYHAF 118 PGQVLGLTFTRKAAGQLLRRVR+RLARL+G GL G G DP P VSTYHAF Sbjct 63 PGQVLGLTFTRKAAGQLLRRVRTRLARLSGAGLVPGIGPGLGATDDP----PTVSTYHAF 118 Query 119 AGSLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQ 178 AG LLRD+GLLLP+EP+TRLL ETELWQLA VV + G L DK+PAAVT +V+RL GQ Sbjct 119 AGMLLRDHGLLLPIEPETRLLGETELWQLAHRVVCEHPGPLEIDKTPAAVTDMVLRLAGQ 178 Query 179 LGEHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDAL 238 L EHLVDT LRDTHVELERLVH LPAG YQRDRGPSQWLLRMLATQT+R EL+PL+DAL Sbjct 179 LAEHLVDTDELRDTHVELERLVHTLPAGPYQRDRGPSQWLLRMLATQTERTELIPLVDAL 238 Query 239 GERMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLF 298 RM + KVMDF MQMA+AARLAA PQVG +LR RYRVVLLDEYQDTGHAQRV LS+LF Sbjct 239 HRRMQSEKVMDFGMQMAAAARLAAAHPQVGAELRARYRVVLLDEYQDTGHAQRVALSALF 298 Query 299 GGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQ 358 GGGVDDGLALTAVGDPIQSIYGWRGASATNLPRF TDFPLSD TPA VLEL TSWRNPP Sbjct 299 GGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFATDFPLSDCTPARVLELRTSWRNPPS 358 Query 359 ALRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAE 418 L +AN +SAEAR+RSVAVR+LRPRP A PG +R ALL +V AER+W+AD + RY A Sbjct 359 TLHLANAVSAEARQRSVAVRSLRPRPGAEPGTIRLALLDNVAAERDWLADEVARRYDAAR 418 Query 419 ADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADP 478 A+ PPTAAVL+RRNADAA +A+ L ARG+P EVVGLAGLL + EVA+VVAMLRLVADP Sbjct 419 AEDEAPPTAAVLLRRNADAAPMAEALTARGVPVEVVGLAGLLGVAEVADVVAMLRLVADP 478 Query 479 TAGAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPS-TASPESIAMAASADADNPCLA 537 TAGAAAMR +TGPRWRLG RD+AALWRRA+ L P A+ I A+ DAD CLA Sbjct 479 TAGAAAMRTVTGPRWRLGGRDIAALWRRAVELDDGGPGPEATAAEIVARAAPDADAACLA 538 Query 538 DAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAP 597 DAI DPG AE YS GY RI AL EL++LRG LG +LPDLV EVRRVLGVD E RA+ P Sbjct 539 DAICDPGPAERYSPEGYRRIVALGRELTSLRGHLGIALPDLVTEVRRVLGVDVEARAAMP 598 Query 598 VSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVAC 657 V GW+G EHLDAF DVVA YA R A+++GLLAYLD A ENGL PA+L V+ Sbjct 599 VPAGWSGTEHLDAFVDVVADYAGRPG-----ATISGLLAYLDAAMERENGLAPADLAVST 653 Query 658 DRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHG 717 +RVQ+LTVHAAKGLEWQVVAV HLS +FPST +WLTDPA+LPPLLRGDRA+ HG Sbjct 654 ERVQILTVHAAKGLEWQVVAVPHLSGRIFPSTAQARTWLTDPADLPPLLRGDRATTTDHG 713 Query 718 IPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTG 777 +PVLDTS V DRK LSD+I++H+R L++RRVDEERRLLYVA+TRAEDTLL+SGHHWG T Sbjct 714 VPVLDTSDVNDRKILSDRINDHKRHLEQRRVDEERRLLYVALTRAEDTLLLSGHHWGATE 773 Query 778 TKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLA 837 KPRGPSEFL ELKDIIDR+ AG PCGVV+QWA APA E+NPL DN E +WPADP Sbjct 774 AKPRGPSEFLEELKDIIDRAEQAGQPCGVVDQWAPAPAEGEKNPLRDNVKEVLWPADPAG 833 Query 838 ARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPAR 897 RR V+RGA LVA AM+ + + D+D W+ DVDALLAER AA+ P Sbjct 834 GRRAAVDRGAQLVARAMAGAVE-TVQDVDG--------WAADVDALLAERERAAQKPPLT 884 Query 898 GLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLG 957 LP +SVS+LV L DP RL R+P RPDP+A LG AFH WVQ+++GAE LFDL Sbjct 885 -LPAEVSVSTLVNLSNDPDAVLSRLNRRVPTRPDPNASLGTAFHDWVQRYFGAERLFDLD 943 Query 958 DLPGAADREV--GDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFV 1015 DLPGA D + + E+L LQ +F S WAARTP VEVPF+M IG+T+VRGRIDAVF Sbjct 944 DLPGAVDSDFRRTEAEQLTELQTSFMLSPWAARTPIDVEVPFDMVIGETMVRGRIDAVFA 1003 Query 1016 DPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGIT 1075 D DGGAT+VDWKTG P P+A AA+QLAVYRLAWA L GCP VR AF+YVR T Sbjct 1004 DDDGGATIVDWKTGAAPDTPSAAEHAAIQLAVYRLAWAQLSGCPVERVRAAFHYVRPNQT 1063 Query 1076 VVPDELP 1082 + P LP Sbjct 1064 LRPAGLP 1070 >gi|145225243|ref|YP_001135921.1| UvrD/REP helicase [Mycobacterium gilvum PYR-GCK] gi|145217729|gb|ABP47133.1| UvrD/REP helicase [Mycobacterium gilvum PYR-GCK] Length=1091 Score = 1366 bits (3536), Expect = 0.0, Method: Compositional matrix adjust. Identities = 743/1095 (68%), Positives = 840/1095 (77%), Gaps = 27/1095 (2%) Query 10 YSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPG 69 YSPAEL+ ALGLF PT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYA PG Sbjct 6 YSPAELSRALGLFEPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYATPG 65 Query 70 QVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACA-----PV-VSTYHAFAGSLL 123 +VLGLTFTRKAAGQLLRRVRSRLARLAG GL PAA A PV + TYHAFAG+LL Sbjct 66 EVLGLTFTRKAAGQLLRRVRSRLARLAGAGLTI--PAAGADLADDPVTIGTYHAFAGTLL 123 Query 124 RDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHL 183 R++GL+LP+EPDTRLL ETELWQLAF VV + L TDKSPA++T++V+RL GQL EHL Sbjct 124 REFGLMLPVEPDTRLLGETELWQLAFRVVCEHPAALDTDKSPASITAMVLRLAGQLSEHL 183 Query 184 VDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMH 243 VDT LRDTHVEL+RLVH LPAGRYQRDRGPSQWLLRMLATQT+R LVPL+DAL RM Sbjct 184 VDTEQLRDTHVELDRLVHTLPAGRYQRDRGPSQWLLRMLATQTERTMLVPLIDALHRRMR 243 Query 244 AGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVD 303 +VMDF MQMASAARLA+T P VG+ LR+RYRVVLLDEYQDTGHAQRV LSSLFGGG D Sbjct 244 EERVMDFGMQMASAARLASTHPAVGEQLRQRYRVVLLDEYQDTGHAQRVALSSLFGGGAD 303 Query 304 DGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVA 363 DGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAP LEL TSWRNPP+ L +A Sbjct 304 DGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPTLELRTSWRNPPEVLHLA 363 Query 364 NGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVK 423 N S +ARRRSV VR+L+PRP+A PG+VR ALL DV+AER+W+AD + R+ A Sbjct 364 NAASVDARRRSVEVRSLQPRPNAEPGSVRAALLSDVEAERDWVADQVAHRWHGGLAASGT 423 Query 424 PPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAA 483 PTAAVLVRRNADAA +AD L RG+P EVVGLAGLL++PEVA+VVAMLR+ DPTAGAA Sbjct 424 APTAAVLVRRNADAAPMADALSRRGVPVEVVGLAGLLAVPEVADVVAMLRVAVDPTAGAA 483 Query 484 AMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADAD----NPCLADA 539 A+RVLTGPRWRLGARDL ALWRRA+TL PS + S A + + CLADA Sbjct 484 AVRVLTGPRWRLGARDLTALWRRAVTLVDTGPSASDAVSATAEIVAKLEPDADDACLADA 543 Query 540 ISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVS 599 + DPG A YS GY RI AL EL+ALR L LPDLVAE+RR LG+D EVRA+ P+S Sbjct 544 VCDPGPAAAYSPTGYARIVALGRELTALRAHLSSPLPDLVAEIRRTLGIDAEVRAAQPIS 603 Query 600 GGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDR 659 GW+G EHLD F DVVA +A R + +S GLLAYLD AE VENGL PAE+TV+ DR Sbjct 604 AGWSGTEHLDRFGDVVAEFASRGTPTAS-----GLLAYLDTAEQVENGLAPAEVTVSSDR 658 Query 660 VQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIP 719 VQ+LTVHAAKGLEWQ+VAV HL VFPST S +WLTD A+LPPLLRGD A+ AHG+P Sbjct 659 VQILTVHAAKGLEWQIVAVPHLVGRVFPSTASPRTWLTDAADLPPLLRGDCATVSAHGVP 718 Query 720 VLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTK 779 VLDTS V+DRK LSDKI+ H+ LD+RR DEERRLLYVA+TRAE TLLVSGHHWG T +K Sbjct 719 VLDTSDVSDRKGLSDKIAAHKSSLDQRRTDEERRLLYVAITRAEHTLLVSGHHWGATESK 778 Query 780 PRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAAR 839 PRGPS FL E+KD+ID S G PCG + WA APA E NP+ D +EAVWP DP+A R Sbjct 779 PRGPSTFLTEIKDVIDASIEEGRPCGSIAVWADAPADGETNPIRDRVVEAVWPVDPVAGR 838 Query 840 RGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAA-RGAPARG 898 RG V+RGA LVA A+S + P +D DH W DVDALLAER AA R P+ Sbjct 839 RGPVDRGAHLVAEALSGECPEVGSDDDH-------GWVADVDALLAERDLAAQRAVPS-- 889 Query 899 LPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGD 958 LP LSVS++VEL DP RL RLP+RPD HA LG AFH WVQ+++ AE LFDL D Sbjct 890 LPAQLSVSAMVELGRDPEAVAHRLQRRLPRRPDSHALLGTAFHEWVQRYFQAEKLFDLDD 949 Query 959 LPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPD 1018 LPGA D + D EL LQ AF S WAARTP VEVPF+M + +VRGRIDA+F D D Sbjct 950 LPGAVDADRQDRGELDELQTAFAVSPWAARTPIDVEVPFDMMLAGRIVRGRIDAIFADGD 1009 Query 1019 GGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVP 1078 G TVVDWKTG+ P P + A+QLAVYRLAWA L GCPTS+VR AF+YVRSG TV+P Sbjct 1010 GSFTVVDWKTGEMPTDPEVLAHNALQLAVYRLAWARLHGCPTSAVRAAFHYVRSGRTVMP 1069 Query 1079 DELPAPGELAMLLTD 1093 D LP +L LL D Sbjct 1070 DALPEEDDLIALLAD 1084 >gi|315445540|ref|YP_004078419.1| DNA/RNA helicase, superfamily I [Mycobacterium sp. Spyr1] gi|315263843|gb|ADU00585.1| DNA/RNA helicase, superfamily I [Mycobacterium sp. Spyr1] Length=1091 Score = 1360 bits (3521), Expect = 0.0, Method: Compositional matrix adjust. Identities = 740/1095 (68%), Positives = 839/1095 (77%), Gaps = 27/1095 (2%) Query 10 YSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPG 69 YSPAEL+ ALGLF PT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYA PG Sbjct 6 YSPAELSRALGLFEPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYATPG 65 Query 70 QVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACA-----PV-VSTYHAFAGSLL 123 +VLGLTFTRKAAGQLLRRVRSRLARLAG GL PAA A PV + TYHAFAG+LL Sbjct 66 EVLGLTFTRKAAGQLLRRVRSRLARLAGAGLTI--PAAGADLADDPVTIGTYHAFAGTLL 123 Query 124 RDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHL 183 R++GL+LP+EPDTRLL ETELWQLAF VV + L TDKSPA++T++V+RL GQL EHL Sbjct 124 REFGLMLPVEPDTRLLGETELWQLAFRVVCEHPAALDTDKSPASITAMVLRLAGQLSEHL 183 Query 184 VDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMH 243 VDT LRDTHVEL+RLVH LPAGRYQRDRGPSQWLLRMLATQT+R LVPL+DAL RM Sbjct 184 VDTEQLRDTHVELDRLVHTLPAGRYQRDRGPSQWLLRMLATQTERTMLVPLIDALHHRMR 243 Query 244 AGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVD 303 +VMDF MQMASAARLA+T P VG+ LR+RYRVVLLDEYQDTGHAQRV LSSLFGGG D Sbjct 244 EERVMDFGMQMASAARLASTHPAVGEQLRQRYRVVLLDEYQDTGHAQRVALSSLFGGGAD 303 Query 304 DGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVA 363 DGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAP LEL TSWRNPP+ L +A Sbjct 304 DGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPTLELRTSWRNPPEVLHLA 363 Query 364 NGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVK 423 N S +ARRRSV VR+L+PRP+A PG+VR ALL DV+AER+W+AD + R+ A Sbjct 364 NAASVDARRRSVEVRSLQPRPNAEPGSVRAALLSDVEAERDWVADQVAHRWHGGLAASGT 423 Query 424 PPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAA 483 PTAAVLVRRNADAA +AD L RG+P EVVGLAGLL++PEVA+VVAMLR+ DPTAGAA Sbjct 424 APTAAVLVRRNADAAPMADALSRRGVPVEVVGLAGLLAVPEVADVVAMLRVAVDPTAGAA 483 Query 484 AMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADAD----NPCLADA 539 A+RVLTGPRWRLGARDL ALWRRA+TL PS + S A + + CLADA Sbjct 484 AVRVLTGPRWRLGARDLTALWRRAVTLVDTGPSASDAVSATAEIVAKLEPDADDACLADA 543 Query 540 ISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVS 599 + DPG A YS GY RI AL EL+ALR L LPDLVAE+RR LG+D EVRA+ P+S Sbjct 544 VCDPGPAAAYSPTGYARIVALGRELTALRAHLSSPLPDLVAEIRRTLGIDAEVRAAQPIS 603 Query 600 GGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDR 659 GW+G EHLD F DVVA +A R + +S GLLAYLD AE VENGL PAE+TV+ DR Sbjct 604 AGWSGTEHLDRFGDVVAEFASRGTPTAS-----GLLAYLDTAEQVENGLAPAEVTVSSDR 658 Query 660 VQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIP 719 VQ+LTVHAAKGLEWQ+VAV HL VFPST S +WLTD A+LPPLLRGD A+ AHG+P Sbjct 659 VQILTVHAAKGLEWQIVAVPHLVGRVFPSTASARTWLTDAADLPPLLRGDCATVSAHGVP 718 Query 720 VLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTK 779 VLDTS V+DRK LSDKI+ H+ LD+RR DEERRLLYVA+TRAE TLLVSGHHWG T +K Sbjct 719 VLDTSDVSDRKGLSDKIAAHKSSLDQRRTDEERRLLYVAITRAEHTLLVSGHHWGATESK 778 Query 780 PRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAAR 839 PRGPS FL E++D+ID S G PCG ++ WA APA E NP+ +EAVWP DP+A R Sbjct 779 PRGPSTFLTEIRDVIDASTEDGRPCGSIDVWADAPADGETNPIRGRVVEAVWPVDPVAGR 838 Query 840 RGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAA-RGAPARG 898 RG V+RGA LVA +S + P +D DH W DVDALLAER AA R P+ Sbjct 839 RGPVDRGAHLVAEVLSGECPEVGSDDDH-------GWVADVDALLAERDLAAQRAVPS-- 889 Query 899 LPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGD 958 LP LSVS++VEL DP RL RLP+RPD HA LG AFH WVQ+++ AE LFDL D Sbjct 890 LPAQLSVSAMVELGRDPEAVAHRLQRRLPRRPDSHALLGTAFHEWVQRYFQAEKLFDLDD 949 Query 959 LPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPD 1018 LPGA D + D EL LQ AF S WAARTP VEVPF+M + +VRGRIDA+F D D Sbjct 950 LPGAVDADRQDRGELDELQTAFAVSPWAARTPIDVEVPFDMMLAGRIVRGRIDAIFADGD 1009 Query 1019 GGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVP 1078 G TVVDWKTG+ P P + A+QLAVYRLAWA L GCPTS+VR AF+YVRSG TV+P Sbjct 1010 GSFTVVDWKTGEMPTDPEVLAHNALQLAVYRLAWARLHGCPTSAVRAAFHYVRSGRTVMP 1069 Query 1079 DELPAPGELAMLLTD 1093 D LP +L LL D Sbjct 1070 DALPEEDDLIALLAD 1084 >gi|289571423|ref|ZP_06451650.1| UvrD/Rep family helicase [Mycobacterium tuberculosis T17] gi|289545177|gb|EFD48825.1| UvrD/Rep family helicase [Mycobacterium tuberculosis T17] Length=690 Score = 1352 bits (3498), Expect = 0.0, Method: Compositional matrix adjust. Identities = 690/690 (100%), Positives = 690/690 (100%), Gaps = 0/690 (0%) Query 412 MRYQRAEADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAM 471 MRYQRAEADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAM Sbjct 1 MRYQRAEADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAM 60 Query 472 LRLVADPTAGAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADA 531 LRLVADPTAGAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADA Sbjct 61 LRLVADPTAGAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADA 120 Query 532 DNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCE 591 DNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCE Sbjct 121 DNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCE 180 Query 592 VRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPA 651 VRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPA Sbjct 181 VRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPA 240 Query 652 ELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRA 711 ELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRA Sbjct 241 ELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRA 300 Query 712 SAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGH 771 SAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGH Sbjct 301 SAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGH 360 Query 772 HWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVW 831 HWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVW Sbjct 361 HWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVW 420 Query 832 PADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAA 891 PADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAA Sbjct 421 PADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAA 480 Query 892 RGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAE 951 RGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAE Sbjct 481 RGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAE 540 Query 952 LLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRID 1011 LLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRID Sbjct 541 LLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRID 600 Query 1012 AVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVR 1071 AVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVR Sbjct 601 AVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVR 660 Query 1072 SGITVVPDELPAPGELAMLLTDCAGRRSDT 1101 SGITVVPDELPAPGELAMLLTDCAGRRSDT Sbjct 661 SGITVVPDELPAPGELAMLLTDCAGRRSDT 690 >gi|120402801|ref|YP_952630.1| UvrD/REP helicase [Mycobacterium vanbaalenii PYR-1] gi|119955619|gb|ABM12624.1| UvrD/REP helicase [Mycobacterium vanbaalenii PYR-1] Length=1086 Score = 1299 bits (3361), Expect = 0.0, Method: Compositional matrix adjust. Identities = 747/1079 (70%), Positives = 831/1079 (78%), Gaps = 23/1079 (2%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 RYSPAEL+ ALGLF PT EQAAVIAA PGPLVVIAGAGAGKTETMAARVVWLVANGYA P Sbjct 5 RYSPAELSRALGLFEPTDEQAAVIAAEPGPLVVIAGAGAGKTETMAARVVWLVANGYARP 64 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGL----GCGDPAACAPVVSTYHAFAGSLLR 124 G+VLGLTFTRKAAGQLLRRVR+RLARLAG GL G D A +STYHAFAG+LLR Sbjct 65 GEVLGLTFTRKAAGQLLRRVRARLARLAGAGLMIPTGGADFADDPVTISTYHAFAGNLLR 124 Query 125 DYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLV 184 ++GLLLP+EPDTRLL ETELWQLAF VV + L T+KSPA++T +V+RL GQL EHLV Sbjct 125 EFGLLLPVEPDTRLLGETELWQLAFRVVCAHPAALDTEKSPASITDMVLRLAGQLSEHLV 184 Query 185 DTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHA 244 DT ALRDTHVELERLV LPAGRYQRDRGPSQWLLRMLATQT+R LVPL+DAL RM Sbjct 185 DTAALRDTHVELERLVLNLPAGRYQRDRGPSQWLLRMLATQTERTMLVPLVDALHRRMRE 244 Query 245 GKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDD 304 +VMDF MQMASAARLAA PQVG LR+RYRVVLLDEYQDTGHAQRV LSSLFGGG DD Sbjct 245 ERVMDFGMQMASAARLAAQFPQVGAQLRQRYRVVLLDEYQDTGHAQRVALSSLFGGGADD 304 Query 305 GLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVAN 364 GLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAP LEL TSWRNPP+ L +AN Sbjct 305 GLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPTLELRTSWRNPPEVLHLAN 364 Query 365 GISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRA-EADGVK 423 +S +ARRRSVAVRAL+PRP A PG+VRCALL DV+ ER+W+AD + R+ EADG Sbjct 365 EVSVDARRRSVAVRALQPRPGAEPGSVRCALLSDVERERDWVADQIARRWHAGIEADGAA 424 Query 424 PPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAA 483 PTAAVLVRRNADAA +AD L RG+ EVVGLAGLL++PEVA+VVAMLRL ADPTAGAA Sbjct 425 -PTAAVLVRRNADAAPMADALTRRGVAVEVVGLAGLLAVPEVADVVAMLRLAADPTAGAA 483 Query 484 AMRVLTGPRWRLGARDLAALWRRALTL---SGESPSTASPESIAMAASADADNPCLADAI 540 A+RVLTGPRWRLGARD+AALWRRA+ L S ++ I DAD CLADAI Sbjct 484 AVRVLTGPRWRLGARDVAALWRRAVALVEPGASSDGESATAGIVAQLGPDADAACLADAI 543 Query 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 DPG A YS AG+ RI AL EL+ LR L LPDL+AEVRRVLG+D EVRA+ PVS Sbjct 544 CDPGPATAYSEAGHARIVALGRELTGLRAHLQSPLPDLLAEVRRVLGIDTEVRAAQPVSA 603 Query 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 GW+G EHLDAF DVVA +A R A+V+ LL YLD+AE VENGL PAE+TV+ DRV Sbjct 604 GWSGTEHLDAFGDVVADFAARGG-----ATVSALLGYLDIAEQVENGLAPAEVTVSADRV 658 Query 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Q+LTVHAAKGLEWQ+VAV HLS VFPST S +WLTD A+LPPLLRGD A+ HG+PV Sbjct 659 QILTVHAAKGLEWQIVAVPHLSGRVFPSTASPRTWLTDAADLPPLLRGDCATVSEHGVPV 718 Query 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 LDTS V+DRK LSDKI +H+R L++RR DEERRLLYVA+TRAE TLLVSGHHWG T +KP Sbjct 719 LDTSDVSDRKGLSDKIYDHKRSLEQRRTDEERRLLYVAITRAEHTLLVSGHHWGATESKP 778 Query 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 RGPS FLCELKD+ID S +G PCG V+ WA APA E NPL D +EAVWP DPLA RR Sbjct 779 RGPSTFLCELKDVIDASVQSGSPCGAVDVWADAPADGEPNPLRDRVVEAVWPEDPLAGRR 838 Query 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 + GA LV AMS T P+P W+ DVDALLAER AA+ P LP Sbjct 839 AHTDHGARLVTTAMS-------TAGGAGPQPDVHGWTADVDALLAERELAAQ-RPVPPLP 890 Query 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 LSVS++VEL DP QRL RLP+RPD A LG AFH WVQ+++ AE LFDL DLP Sbjct 891 LQLSVSAMVELGRDPEAVAQRLQRRLPRRPDAQALLGTAFHEWVQRYFQAEKLFDLDDLP 950 Query 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 GA D + D EL LQ AF S WAARTP VEVPF+M I VVRGRIDAVF D D G Sbjct 951 GAVDADRQDRGELEELQAAFALSPWAARTPIDVEVPFDMMIAGRVVRGRIDAVFADGD-G 1009 Query 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPD 1079 VVDWKTG+PP ++ AVQLAVYRLAWA L CP SSVR AF+YVRSG TVVPD Sbjct 1010 VMVVDWKTGEPPATEEELQHNAVQLAVYRLAWARLHDCPVSSVRAAFHYVRSGRTVVPD 1068 >gi|308377259|ref|ZP_07441669.2| UvrD/REP helicase subfamily [Mycobacterium tuberculosis SUMu008] gi|308348310|gb|EFP37161.1| UvrD/REP helicase subfamily [Mycobacterium tuberculosis SUMu008] Length=695 Score = 1255 bits (3248), Expect = 0.0, Method: Compositional matrix adjust. Identities = 646/647 (99%), Positives = 646/647 (99%), Gaps = 0/647 (0%) Query 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL Sbjct 44 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 103 Query 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 120 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG Sbjct 104 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG 163 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG Sbjct 164 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 223 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE Sbjct 224 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 283 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG Sbjct 284 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 343 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL Sbjct 344 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 403 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD Sbjct 404 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 463 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA Sbjct 464 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 523 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 540 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI Sbjct 524 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI 583 Query 541 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 600 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG Sbjct 584 SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG 643 Query 601 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENG 647 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEV ENG Sbjct 644 GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVAENG 690 >gi|169630596|ref|YP_001704245.1| ATP-dependent DNA helicase [Mycobacterium abscessus ATCC 19977] gi|169242563|emb|CAM63591.1| Probable ATP-dependent DNA helicase [Mycobacterium abscessus] Length=1078 Score = 1179 bits (3049), Expect = 0.0, Method: Compositional matrix adjust. Identities = 654/1080 (61%), Positives = 765/1080 (71%), Gaps = 26/1080 (2%) Query 10 YSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPG 69 YSPAEL+ LGLF PT EQAAVI APPGP+VVIAGAGAGKTETMAARVVWLVANGYA PG Sbjct 4 YSPAELSRVLGLFEPTDEQAAVIGAPPGPMVVIAGAGAGKTETMAARVVWLVANGYATPG 63 Query 70 QVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACA---PVVSTYHAFAGSLLRDY 126 QVLGLTFTRKAA QLLRRVRSRLARLAG G+ P A PV++TYHA+AG+LLR++ Sbjct 64 QVLGLTFTRKAAAQLLRRVRSRLARLAGSGILA--PVAADEPDPVIATYHAYAGTLLREH 121 Query 127 GLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDT 186 GLLLP+EP+ RLL+ET+LWQLAF +V +DG L T+K+P AVT+ V+ L GQL EHLV+T Sbjct 122 GLLLPMEPNARLLTETQLWQLAFRLVCDFDGDLDTEKTPGAVTAQVLALAGQLSEHLVNT 181 Query 187 RALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGK 246 L +H ELERL+ LP G QR+ GPS WLLR++ TQ +R +L+ +++ L M Sbjct 182 TDLLSSHDELERLILTLPPGPRQREGGPSAWLLRLIETQRERTQLMAIVEQLIALMRTRG 241 Query 247 VMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGL 306 V+DF QMA +ARLAA P VGQ R RYRVVLLDEYQDTGHAQR++LSSLFG GVD L Sbjct 242 VLDFGAQMALSARLAADHPIVGQTQRERYRVVLLDEYQDTGHAQRILLSSLFGRGVDPDL 301 Query 307 ALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGI 366 ALTAVGDPIQSIYGWRGASATNLPRFTTDFPL DG+PAP EL TSWRNPP+AL +AN + Sbjct 302 ALTAVGDPIQSIYGWRGASATNLPRFTTDFPLPDGSPAPTRELRTSWRNPPEALHLANSV 361 Query 367 SAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPT 426 S EARRRSVAVR L PRPDA G + CALL D+ AEREW+A L Y++A +G +PP+ Sbjct 362 SEEARRRSVAVRPLLPRPDAASGRIACALLGDIAAEREWVATQLAAVYEQAHREGNRPPS 421 Query 427 AAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMR 486 +AVLVRRN+DAA +A+ L A+G+PAEVVGL GLL +PEVA+ VAMLRLVADPTAG AA+R Sbjct 422 SAVLVRRNSDAAPMAEALAAQGVPAEVVGLTGLLGLPEVADTVAMLRLVADPTAGPAALR 481 Query 487 VLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAISDPGSA 546 VLTGPRWRLGA DL LWRRA P+ +AD PCLADAISDPG+ Sbjct 482 VLTGPRWRLGAHDLVVLWRRATGFGRGGAPAVGPD-----VGEEADIPCLADAISDPGTP 536 Query 547 EGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGPE 606 + YS G+ R+ AL ELSALR RLG L DL+AEV+RVL +D E+ A G + Sbjct 537 DEYSPEGWKRLTALRRELSALRARLGMPLTDLIAEVQRVLALDVELVAGRRGE----GLD 592 Query 607 HLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRVQVLTVH 666 L AF DV AG+AE A V+ L YLD A +E GL P E+ + RVQ+LTVH Sbjct 593 QLRAFTDVAAGFAESADQSDPVGVVSAFLQYLDAAWEIEKGLAPVEVAASPGRVQILTVH 652 Query 667 AAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAG-AHGIPVLDTSA 725 +AKGLEW VVAV HLS GVFPS V+ +WLT ELPPL+RGDRAS G G+P LDT Sbjct 653 SAKGLEWDVVAVPHLSAGVFPSGVAAPTWLTSATELPPLVRGDRASQGDQFGVPQLDTEG 712 Query 726 VADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSE 785 + +RKQL+D I+ H+ L RR+DEERRLLYVAVTR + L VSGHHWG TG KP+GPS+ Sbjct 713 ITNRKQLADAIARHKDSLATRRIDEERRLLYVAVTRCAEQLFVSGHHWGQTGLKPKGPSD 772 Query 786 FLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARRGDVER 845 FL EL+D+I+ +AA G PCG VE+WA P ERNP+ D +EA WPADPLA RR D+E Sbjct 773 FLVELRDVIESAAAEGVPCGTVERWAPEPPAGERNPMLDQTVEAQWPADPLAGRRDDIEA 832 Query 846 GAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLPNHLSV 905 GA LV AA++ + D D W DVDALL ER R P LP HLSV Sbjct 833 GARLVRAALADGAALTMEDDDD-----TDGWEADVDALLREREQGHR-RPEMTLPQHLSV 886 Query 906 SSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADR 965 +SLVEL DP +RL P RPD A G AFH+WVQ+ YG+ L D DLPG Sbjct 887 TSLVELRQDPQALARRLARPRPTRPDLDARRGTAFHSWVQRHYGSVRLIDFEDLPGDGYG 946 Query 966 EVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGGA---T 1022 D E+LAALQ AF S WA RTP VEVPFE+ + VVRGRIDAVF PD T Sbjct 947 SFEDAEDLAALQSAFLESEWADRTPVEVEVPFEISVAGIVVRGRIDAVF-GPDSAEDTWT 1005 Query 1023 VVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDELP 1082 VVDWKTG P G M+ AA+QLAVYR AWA+LR + VR F+YVRSG TV P ELP Sbjct 1006 VVDWKTGHEPAGD-EMKAAALQLAVYRRAWASLREIDPARVRAVFHYVRSGRTVAPTELP 1064 >gi|308377258|ref|ZP_07441668.2| hypothetical protein TMHG_02416 [Mycobacterium tuberculosis SUMu008] gi|308348513|gb|EFP37364.1| hypothetical protein TMHG_02416 [Mycobacterium tuberculosis SUMu008] Length=605 Score = 1158 bits (2996), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/587 (99%), Positives = 586/587 (99%), Gaps = 0/587 (0%) Query 515 PSTASPESIAMAASADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHS 574 PSTASPESIAMAASADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHS Sbjct 19 PSTASPESIAMAASADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHS 78 Query 575 LPDLVAEVRRVLGVDCEVRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGL 634 LPDLVAEVRRVLGVDCEVRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGL Sbjct 79 LPDLVAEVRRVLGVDCEVRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGL 138 Query 635 LAYLDVAEVVENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSS 694 LAYLDVAEV ENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSS Sbjct 139 LAYLDVAEVAENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSS 198 Query 695 WLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRL 754 WLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRL Sbjct 199 WLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRL 258 Query 755 LYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAP 814 LYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAP Sbjct 259 LYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAP 318 Query 815 AGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDA 874 AGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDA Sbjct 319 AGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDA 378 Query 875 PWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHA 934 PWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHA Sbjct 379 PWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHA 438 Query 935 WLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVE 994 WLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVE Sbjct 439 WLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVE 498 Query 995 VPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAA 1054 VPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAA Sbjct 499 VPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAA 558 Query 1055 LRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAMLLTDCAGRRSDT 1101 LRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAMLLTDCAGRRSDT Sbjct 559 LRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAMLLTDCAGRRSDT 605 >gi|111023339|ref|YP_706311.1| ATP-dependent DNA helicase [Rhodococcus jostii RHA1] gi|110822869|gb|ABG98153.1| probable ATP-dependent DNA helicase [Rhodococcus jostii RHA1] Length=1115 Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust. Identities = 634/1106 (58%), Positives = 748/1106 (68%), Gaps = 37/1106 (3%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 R P ELA LG PPT EQAAVIAAP GP +V+AGAGAGKTETMAARVVWLVANG +P Sbjct 4 RIDPVELAVGLGQHPPTPEQAAVIAAPLGPTLVVAGAGAGKTETMAARVVWLVANGVVDP 63 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGL-GCGDPA--------ACAPVVSTYHAFA 119 VLGLTFTRKAA QL R+R RLARLAG L DP+ A P VSTYH++A Sbjct 64 EAVLGLTFTRKAAQQLTARIRKRLARLAGSDLLRRVDPSGDLRSRILAGEPEVSTYHSYA 123 Query 120 GSLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQL 179 G LL ++GLLLP+EP LLSETELWQLA VVS +DG L TD++PA+VT V+ L GQL Sbjct 124 GRLLSEHGLLLPIEPSATLLSETELWQLAHRVVSSWDGDLDTDRNPASVTEAVLALSGQL 183 Query 180 GEHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALG 239 EHLV+ LR+ H EL++LVH LPAG QR GP + LL +L TQ +R EL+PL+ L Sbjct 184 AEHLVEPDDLREAHTELDKLVHTLPAGPRQRG-GPGKELLDILDTQHRRVELLPLVQRLA 242 Query 240 ERMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFG 299 + + +DF QM+ AAR+AA P+VG R R+RVVLLDEYQDTGH+QRV+LSSLFG Sbjct 243 DTLRREGALDFGSQMSLAARVAADHPEVGLAERTRFRVVLLDEYQDTGHSQRVLLSSLFG 302 Query 300 GGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQA 359 GG+D LALTAVGDP+QSIYGWRGASA NLPRF TDFPL++G PAP LELLTSWRNPP+A Sbjct 303 GGLDGELALTAVGDPMQSIYGWRGASAANLPRFATDFPLANGDPAPTLELLTSWRNPPEA 362 Query 360 LRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEA 419 L +AN SA R R V+V LR RP A PG VR AL DV EREW+AD + +Y A + Sbjct 363 LALANMASASLRERGVSVSTLRARPQAVPGDVRLALTGDVVQEREWVADRIAEQYADATS 422 Query 420 DGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPT 479 G PPTAAVL+RRNADAA IA+ LR+RG+P EVVGL GLL PEVA+V+AMLR+VADP Sbjct 423 RGEDPPTAAVLIRRNADAAPIAEVLRSRGLPVEVVGLGGLLHTPEVADVIAMLRVVADPM 482 Query 480 AGAAAMRVLTGPRWRLGARDLAALWRRALTL---SGESPSTASPESIAMAASA------- 529 AG+AA+R+LTG RW++GA DL AL RRA L +G + A +S A+A + Sbjct 483 AGSAAVRMLTGARWQIGAADLTALSRRASELAIGTGYGTTGAVTDSSALADAVGQALPGE 542 Query 530 DADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVD 589 A+ LADA++DPG AE YS GY RI A+A EL++LR R+G L +LVAEV R LG+ Sbjct 543 HAEQAGLADALADPGPAERYSQVGYARITAVAAELASLRERIGQPLTELVAEVERALGIG 602 Query 590 CEVRASAPVSG-GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGL 648 E +A S G AG EHLDAFADVVAGYA R S A+V GLLA+L E VE GL Sbjct 603 IEAQARTRRSARGSAGREHLDAFADVVAGYASRTS-----ATVTGLLAFLSAGESVEKGL 657 Query 649 PPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRG 708 P E+ V RVQVLTVH+AKGLEW+VVAV HL+ GVFPS + SWL ELPP LRG Sbjct 658 APGEVEVDPHRVQVLTVHSAKGLEWEVVAVPHLTAGVFPSRTASGSWLGAVGELPPSLRG 717 Query 709 DRASAG--AHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTL 766 DRA G A G+PVL+ + DRK L + + H+ L R++DE+RRL YVA+TR E L Sbjct 718 DRARPGESADGVPVLELENLYDRKDLEEAVKAHKAALAARKLDEDRRLFYVALTRTERVL 777 Query 767 LVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNA 826 SGHHW +GT+P+GPSEFL EL+D + G G+V+ WA AP DE+NPL Sbjct 778 FASGHHWAESGTEPKGPSEFLTELRDTVTDEEHEG--IGIVDIWAPAPEPDEQNPLTSTP 835 Query 827 IEAVWPADPLAARRGDVERGAALVAAAMS-ADLPGSTTDIDHPPRPGDAPWSTDVDALLA 885 AVWP DPL RR VERGAALV AA+ A P + D P W+ DVDALLA Sbjct 836 KSAVWPRDPLGLRRESVERGAALVVAALKRAGAPTPAGEDDDPEN-----WAADVDALLA 890 Query 886 ERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQ 945 ER A LP LSVS LVEL DP RL LP P+P A G AFHAWV+ Sbjct 891 EREARANARTEVVLPGQLSVSQLVELEADPDALAARLRRPLPFPPNPLARRGTAFHAWVE 950 Query 946 QFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTV 1005 + +GA L DL +LPGAAD + G +LA LQ AF SSWA R P VEVPFE + TV Sbjct 951 RRFGATRLLDLDELPGAADTDAGPDTDLATLQDAFLRSSWADRNPTEVEVPFETSVAGTV 1010 Query 1006 VRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRT 1065 +RGRIDAVF DPDGG TV+DWKTG P A + +QLA YRLAWA L P VR Sbjct 1011 LRGRIDAVFTDPDGGWTVIDWKTGAEPSA-ANEKAVVMQLAAYRLAWAELMDVPIERVRA 1069 Query 1066 AFYYVRSGITVVPDELPAPGELAMLL 1091 AF+YVR+G T+ PD LP LA LL Sbjct 1070 AFHYVRTGRTIAPDHLPDADALARLL 1095 >gi|226365847|ref|YP_002783630.1| ATP-dependent DNA helicase [Rhodococcus opacus B4] gi|226244337|dbj|BAH54685.1| putative ATP-dependent DNA helicase [Rhodococcus opacus B4] Length=1120 Score = 1109 bits (2869), Expect = 0.0, Method: Compositional matrix adjust. Identities = 636/1105 (58%), Positives = 747/1105 (68%), Gaps = 35/1105 (3%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 R P ELA LG PPT EQAAVIAAP GP +V+AGAGAGKTETMAARVVWLVANG +P Sbjct 4 RIDPVELAIGLGQHPPTPEQAAVIAAPLGPTLVVAGAGAGKTETMAARVVWLVANGVVDP 63 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGL-GCGDPA--------ACAPVVSTYHAFA 119 VLGLTFTRKAA QL R+R RLARLAG L DP+ A P VSTYH++A Sbjct 64 EAVLGLTFTRKAAQQLTTRIRKRLARLAGSELLRRVDPSGDLRSRILAGEPEVSTYHSYA 123 Query 120 GSLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQL 179 G LL ++GLLLP+EP LLSETELWQLA VVS +DG L TD++PA+VT V+ L GQL Sbjct 124 GRLLSEHGLLLPIEPSATLLSETELWQLAHRVVSSWDGDLDTDRNPASVTEAVLALAGQL 183 Query 180 GEHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALG 239 EHLV+ LR+ H EL++LVH LPAG QR GP + LL +L TQ +R EL+PL+ L Sbjct 184 AEHLVEPDDLREAHTELDKLVHTLPAGPRQRG-GPGKDLLDILDTQHRRVELLPLVQRLT 242 Query 240 ERMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFG 299 + + +DF QM+ AAR+AA P+VG R R+RVVLLDEYQDTGHAQRV+LSSLFG Sbjct 243 DTLRREGALDFGSQMSLAARVAADHPEVGVAERTRFRVVLLDEYQDTGHAQRVLLSSLFG 302 Query 300 GGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQA 359 GG+D LALTAVGDP+QSIYGWRGASA NLPRF TDFP+++G PAP LELLTSWRNPP+A Sbjct 303 GGLDGELALTAVGDPMQSIYGWRGASAANLPRFATDFPMANGDPAPTLELLTSWRNPPEA 362 Query 360 LRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEA 419 L +AN SA R R VAV LR RP A PG VR AL DV EREW+AD + +Y A + Sbjct 363 LALANVASASLRERGVAVSMLRARPQAVPGDVRLALTADVVQEREWVADRIAEQYADAAS 422 Query 420 DGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPT 479 G PPTAAVL+RRNADAA IA+ LR+RG+P EVVGL GLL PEVA+V+AMLR+VADP Sbjct 423 RGEDPPTAAVLIRRNADAAPIAEVLRSRGLPVEVVGLGGLLHTPEVADVIAMLRVVADPM 482 Query 480 AGAAAMRVLTGPRWRLGARDLAALWRRALTL---SGESPSTASPESIAMAASA------- 529 AG+AA+R+LTG RW++GA DL AL RRA L +G + A +S A+A + Sbjct 483 AGSAAVRMLTGARWQIGAADLTALSRRASELAIGTGYGTTGAVTDSAALADAVGEALPGE 542 Query 530 DADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVD 589 A+ LADA++DPG AE YS GY RI A+A EL++LR R+G L +LVAEV RVLG+ Sbjct 543 HAEQAGLADALADPGPAERYSQVGYARITAVAAELASLRERIGQPLTELVAEVERVLGIG 602 Query 590 CEVRASAPVSG-GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGL 648 E +A S G AG EHLDAFADVVAGYA R S A+V GLLA+L AE VE GL Sbjct 603 IEAQARTRQSARGSAGREHLDAFADVVAGYANRTS-----ATVTGLLAFLSAAESVEKGL 657 Query 649 PPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRG 708 P E+ V RVQVLTVH+AKGLEW+VVAV+HL+ GVFPS + SWL ELPP LRG Sbjct 658 APGEVEVDPHRVQVLTVHSAKGLEWEVVAVSHLTAGVFPSRTASGSWLGAVGELPPSLRG 717 Query 709 DRASAG--AHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTL 766 DRA G A G+PVL+ + DRK L + + H+ L RR+DE+RRL YVA+TR E L Sbjct 718 DRARPGESADGVPVLELENLYDRKDLEEAVKAHKSALAARRLDEDRRLFYVALTRTERVL 777 Query 767 LVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNA 826 SGHHW +GT+P+GPSEFL EL+D + G GVV+ WA AP +E+NPL Sbjct 778 FASGHHWAESGTEPKGPSEFLTELRDTVTGEEHEG--IGVVDLWAPAPEPEEQNPLTSTP 835 Query 827 IEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAE 886 AVWP DPL RR VERGAALV AA+ S D P W+ DVDALLAE Sbjct 836 KSAVWPRDPLGLRREAVERGAALVVAALRNAGKQSPAGEDEDPE----NWAADVDALLAE 891 Query 887 RAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQ 946 R A LP LSVS LVEL DP RL LP P+P A G AFHAWV++ Sbjct 892 REARANARAEVVLPGQLSVSQLVELEADPDALAARLRRPLPFPPNPLARRGTAFHAWVER 951 Query 947 FYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVV 1006 +GA L DL +LPGAAD G +LA LQ AF S WA R P VEVPFE + TV+ Sbjct 952 RFGATRLLDLDELPGAADTGAGPDADLATLQDAFLRSPWADRNPTEVEVPFETSVAGTVL 1011 Query 1007 RGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTA 1066 RGRIDAVF DPDGG TV+DWKTG P A + +QLA YRLAWA L P VR A Sbjct 1012 RGRIDAVFTDPDGGWTVIDWKTGAEPSA-ANEKAVVMQLAAYRLAWAELMDVPIERVRAA 1070 Query 1067 FYYVRSGITVVPDELPAPGELAMLL 1091 F+YVR+G T+ PD LP LA LL Sbjct 1071 FHYVRTGRTIAPDRLPGADALARLL 1095 >gi|325675756|ref|ZP_08155440.1| UvrD/Rep family helicase [Rhodococcus equi ATCC 33707] gi|325553727|gb|EGD23405.1| UvrD/Rep family helicase [Rhodococcus equi ATCC 33707] Length=1125 Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust. Identities = 638/1128 (57%), Positives = 756/1128 (68%), Gaps = 49/1128 (4%) Query 1 MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL 60 M+ + R SPAELA ALG FPPT EQAAVI AP GP +V+AGAGAGKTETMAARVVWL Sbjct 1 MSTVQSGRRVSPAELAEALGQFPPTPEQAAVIEAPLGPTLVVAGAGAGKTETMAARVVWL 60 Query 61 VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCG-DPA--------ACAPV 111 VANG +P QVLGLTFTRKAA QL R+R RLA+LAG L DP+ A P Sbjct 61 VANGLVDPEQVLGLTFTRKAAQQLTARIRKRLAKLAGSALVRDLDPSGSLRSRILASEPE 120 Query 112 VSTYHAFAGSLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSI 171 VSTYHA+AG LL ++GLLLP+EP LLSETELWQLA+ VVS +D L TD++PA++T Sbjct 121 VSTYHAYAGRLLSEHGLLLPIEPSATLLSETELWQLAYRVVSAWDDDLDTDRNPASITES 180 Query 172 VVRLWGQLGEHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAEL 231 V+ L GQL EHLV+ LR+ H EL++L+H LPAG QR GPS+ LL +L Q QR +L Sbjct 181 VLALSGQLAEHLVEPADLREAHTELDKLIHTLPAGPKQRG-GPSKTLLDLLEVQHQRLDL 239 Query 232 VPLLDALGERMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQR 291 +PL+ L + + +DF QM+ AAR+A+ P+VG+ R R+RVVLLDEYQDTGHAQR Sbjct 240 LPLVQRLADTLRREGALDFGSQMSLAARVASEHPEVGRSERARFRVVLLDEYQDTGHAQR 299 Query 292 VVLSSLFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLT 351 V+LSSLFGGG D GLALTAVGDP+QSIYGWRGASA NLPRF TDFPL+DGTPAP LELLT Sbjct 300 VLLSSLFGGGEDAGLALTAVGDPMQSIYGWRGASAANLPRFATDFPLADGTPAPKLELLT 359 Query 352 SWRNPPQALRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLR 411 SWRNPP+AL +AN IS R R V V LR RP A PG VR ALL V+ ER W+AD + Sbjct 360 SWRNPPEALELANMISEPLRDRGVEVSKLRARPAAVPGDVRLALLDTVETERAWVADRIA 419 Query 412 MRYQRAEADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAM 471 +Y+ A DG KPPTAAVLVRRNADAA IA+ LRARG+ EVVGL GLL PEVA+VVAM Sbjct 420 EQYEAARVDGAKPPTAAVLVRRNADAAPIAEELRARGLAVEVVGLGGLLHTPEVADVVAM 479 Query 472 LRLVADPTAGAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADA 531 LRLVADP AG+AA+RVLTG RW++GA D+ ALW+RA L S A+ AA DA Sbjct 480 LRLVADPMAGSAAVRVLTGARWQIGAADIRALWKRAGELGIRSDHGATGAVTDAAALDDA 539 Query 532 ----------DNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAE 581 + LADA++DPG A YS AGY RI A+A EL++LR RLG L +LVAE Sbjct 540 LGSALPGEQSEQAGLADALADPGPAHRYSEAGYVRICAVAAELASLRERLGQPLTELVAE 599 Query 582 VRRVLGVDCEVRASAPVSG-GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDV 640 V RV+G+ E +A S G AG EHLDAFADVV+GYA R S A++ GLL++L Sbjct 600 VERVIGIGIEAQARTRQSEVGGAGREHLDAFADVVSGYANRTS-----ATLTGLLSFLAA 654 Query 641 AEVVENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPA 700 AE VENGL P E+ VA DRVQVLTVH+AKGLEW+VVAV HL+ GVFPS+ + ++WL A Sbjct 655 AEHVENGLAPGEVEVAPDRVQVLTVHSAKGLEWEVVAVPHLTAGVFPSSQASATWLGSVA 714 Query 701 ELPPLLRGDRASAG--AHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVA 758 ELPP LRGDRA G A G+PVLD + RK L D I H+ L RR+DE+RRL YVA Sbjct 715 ELPPTLRGDRAYPGESADGVPVLDLENLYHRKDLEDAIKSHKDALSTRRLDEDRRLFYVA 774 Query 759 VTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDE 818 +TR E L VSGHHW +G P+GPS FL EL++++ S G+ G ++ WA AP Sbjct 775 LTRTERALFVSGHHWAESGADPKGPSPFLLELEELV--STWEGERLGAIDVWAPAPDDGA 832 Query 819 RNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAP--W 876 NPL A+WP DPL RR DVERGA LV A++ G P P W Sbjct 833 ENPLTATPRSALWPRDPLGRRRADVERGAELVRGALA----GLGKAAPEPEAADGDPDNW 888 Query 877 STDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWL 936 + DVDALLAER G +P LSVS LV+L DP RL LP P+P A Sbjct 889 AADVDALLAERRERGHGGTDVEMPAQLSVSQLVDLAADPDALAARLRRPLPFPPNPLARR 948 Query 937 GDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVP 996 G AFHAWV+Q +GA L D +LPGAAD VG ELA LQ AF S WA R+P VEVP Sbjct 949 GTAFHAWVEQRFGATRLLDFDELPGAADTGVGTETELALLQDAFLRSPWADRSPVEVEVP 1008 Query 997 FEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALR 1056 FE + TV+RGRIDAVF D DGG TV+DWKTG P A R +QLA YR+AWA L Sbjct 1009 FETSVAGTVLRGRIDAVFADADGGWTVIDWKTGAEPSA-ANERAVVMQLAAYRIAWAELM 1067 Query 1057 GC------------PTSSVRTAFYYVRSGITVVPDELPAPGELAMLLT 1092 P VR AF+YVR+G T+ P++LP LA L+T Sbjct 1068 AARQSRLTGRPVEPPLDKVRAAFHYVRTGRTIAPEDLPDADRLARLIT 1115 >gi|312140617|ref|YP_004007953.1| uvrd/rep family ATP-dependent DNA helicase [Rhodococcus equi 103S] gi|311889956|emb|CBH49273.1| putative UvrD/Rep family ATP-dependent DNA helicase [Rhodococcus equi 103S] Length=1116 Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust. Identities = 636/1118 (57%), Positives = 751/1118 (68%), Gaps = 49/1118 (4%) Query 11 SPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQ 70 SPAELA ALG FPPT EQAAVI AP GP +V+AGAGAGKTETMAARVVWLVANG +P Q Sbjct 2 SPAELAEALGQFPPTPEQAAVIEAPLGPTLVVAGAGAGKTETMAARVVWLVANGLVDPEQ 61 Query 71 VLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCG-DPA--------ACAPVVSTYHAFAGS 121 VLGLTFTRKAA QL R+R RLA+LAG L DP+ A P VSTYHA+AG Sbjct 62 VLGLTFTRKAAQQLTARIRKRLAKLAGSALVRDLDPSGSLRSRILASEPEVSTYHAYAGR 121 Query 122 LLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGE 181 LL ++GLLLP+EP LLSETELWQLA+ VVS +D L TD++PA++T V+ L GQL E Sbjct 122 LLSEHGLLLPIEPSATLLSETELWQLAYRVVSAWDDDLDTDRNPASITESVLALSGQLAE 181 Query 182 HLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGER 241 HLV+ LR+ H EL++L+H LPAG QR GPS+ LL +L Q QR +L+PL+ L + Sbjct 182 HLVEPADLREAHTELDKLIHTLPAGPKQRG-GPSKTLLDLLEVQHQRLDLLPLVQRLADT 240 Query 242 MHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGG 301 + +DF QM+ AAR+A+ P+VG+ R R+RVVLLDEYQDTGHAQRV+LSSLFGGG Sbjct 241 LRREGALDFGSQMSLAARVASEHPEVGRSERARFRVVLLDEYQDTGHAQRVLLSSLFGGG 300 Query 302 VDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALR 361 D GLALTAVGDP+QSIYGWRGASA NLPRF TDFPL+DGTPAP LELLTSWRNPP+AL Sbjct 301 EDAGLALTAVGDPMQSIYGWRGASAANLPRFATDFPLADGTPAPKLELLTSWRNPPEALE 360 Query 362 VANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADG 421 +AN IS R R V V LR RP A PG VR ALL V+ ER W+AD + +Y+ A DG Sbjct 361 LANMISEPLRDRGVEVSKLRARPAAVPGDVRLALLDTVETERAWVADRIAEQYEAARVDG 420 Query 422 VKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAG 481 KPPTAAVLVRRNADAA IA+ LRARG+ EVVGL GLL PEVA+VVAMLRLVADP AG Sbjct 421 AKPPTAAVLVRRNADAAPIAEELRARGLAVEVVGLGGLLHTPEVADVVAMLRLVADPMAG 480 Query 482 AAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADA---------- 531 AA+RVLTG RW++GA D+ ALW+RA L S A+ AA DA Sbjct 481 TAAVRVLTGARWQIGAADIRALWKRAGELGIRSDHGATGAVTDAAALDDALGSALPGEQS 540 Query 532 DNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCE 591 + LADA++DPG A YS AGY RI A+A EL++LR RLG L +LVAEV RV+G+ E Sbjct 541 EQAGLADALADPGPAHRYSEAGYVRICAVAAELASLRERLGQPLTELVAEVERVIGIGIE 600 Query 592 VRASAPVSG-GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPP 650 +A S G AG EHLDAFADVV+GYA R S A++ GLL++L AE VENGL P Sbjct 601 AQARTRQSEVGGAGREHLDAFADVVSGYANRTS-----ATLTGLLSFLAAAEHVENGLAP 655 Query 651 AELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDR 710 E+ VA DRVQVLTVH+AKGLEW+VVAV HL+ GVFPS+ + ++WL AELPP LRGDR Sbjct 656 GEVEVAPDRVQVLTVHSAKGLEWEVVAVPHLTAGVFPSSQASATWLGSVAELPPTLRGDR 715 Query 711 ASAG--AHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLV 768 A G A G+PVLD + RK L D I H+ L RR+DE+RRL YVA+TR E L V Sbjct 716 AYPGESADGVPVLDLENLYHRKDLEDAIKSHKDALSTRRLDEDRRLFYVALTRTERALFV 775 Query 769 SGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIE 828 SGHHW +G P+GPS FL EL++++ S G+ G ++ WA AP NPL Sbjct 776 SGHHWAESGADPKGPSPFLLELEELV--STWEGERLGAIDVWAPAPDDGAENPLTATPRS 833 Query 829 AVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAP--WSTDVDALLAE 886 A+WP DPL RR DVERGA LV A++ G P P W+ DVDALLAE Sbjct 834 ALWPRDPLGRRRADVERGAELVRGALA----GLGKAAPEPEAVDGDPDNWAADVDALLAE 889 Query 887 RAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQ 946 R G +P LSVS LV+L DP RL LP P+P A G AFHAWV+Q Sbjct 890 RRERGHGGTDVEMPAQLSVSQLVDLAADPDALAARLRRPLPFPPNPLARRGTAFHAWVEQ 949 Query 947 FYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVV 1006 +GA L D +LPGAAD VG ELA LQ AF S WA R+P VEVPFE + TV+ Sbjct 950 RFGATRLLDFDELPGAADTGVGTETELALLQDAFLRSPWADRSPVEVEVPFETSVAGTVL 1009 Query 1007 RGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGC-------- 1058 RGRIDAVF D DGG TV+DWKTG P A R +QLA YR+AWA L Sbjct 1010 RGRIDAVFADADGGWTVIDWKTGAEPSA-ANERAVVMQLAAYRIAWAELMAARQSRLTGR 1068 Query 1059 ----PTSSVRTAFYYVRSGITVVPDELPAPGELAMLLT 1092 P VR AF+YVR+G T+ P++LP LA L+T Sbjct 1069 PVEPPLDKVRAAFHYVRTGRTIAPEDLPDADRLARLIT 1106 >gi|229490998|ref|ZP_04384831.1| UvrD/REP helicase domain protein [Rhodococcus erythropolis SK121] gi|229322114|gb|EEN87902.1| UvrD/REP helicase domain protein [Rhodococcus erythropolis SK121] Length=1130 Score = 1075 bits (2779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 619/1129 (55%), Positives = 753/1129 (67%), Gaps = 49/1129 (4%) Query 2 TQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLV 61 TQ A + P +LA ALG PPT EQAAVIAAP GP +V+AGAGAGKTETMAARVVWLV Sbjct 5 TQKARRPKIDPVDLAVALGQHPPTPEQAAVIAAPLGPTLVVAGAGAGKTETMAARVVWLV 64 Query 62 ANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIG-LGCGDPA--------ACAPVV 112 ANG+ +P VLGLTFTRKAA QL R+R RLARLAG L DP A P V Sbjct 65 ANGFVDPEAVLGLTFTRKAAQQLTSRIRKRLARLAGSDVLRALDPTGGVRSRILAGEPEV 124 Query 113 STYHAFAGSLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIV 172 STYHA+AG LL ++GLLLP+EP LLSETELWQ+A VVSG+D L TDK+P ++T V Sbjct 125 STYHAYAGRLLSEHGLLLPIEPSATLLSETELWQVAHRVVSGWDSDLDTDKNPGSITETV 184 Query 173 VRLWGQLGEHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELV 232 + L GQL EHLVD L + H EL++L+H LPAG QR GPS+ LL L Q +R EL+ Sbjct 185 LALAGQLAEHLVDPEQLLEAHTELDKLIHTLPAGPKQRG-GPSKELLNYLDVQHKRIELL 243 Query 233 PLLDALGERMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRV 292 PL+ LGE + +DF QM+ +AR+A+ P+VGQ R R+RVVLLDEYQDTGHAQRV Sbjct 244 PLVARLGETLRREGALDFGSQMSLSARVASEHPEVGQTERERFRVVLLDEYQDTGHAQRV 303 Query 293 VLSSLFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTS 352 +LSSLFGGG D LALTAVGDP+QSIYGWRGASA NLPRF TDFPL++G PAP LELLTS Sbjct 304 LLSSLFGGGADGRLALTAVGDPMQSIYGWRGASAANLPRFATDFPLANGKPAPTLELLTS 363 Query 353 WRNPPQALRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRM 412 WRNPP+AL +AN SA RRR VAV LR RP A G VR ALL D++ ER+W+A+ + Sbjct 364 WRNPPEALELANLSSAPLRRRGVAVSTLRARPGAVAGDVRLALLGDLEQERQWVAEKIAE 423 Query 413 RYQRAEADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAML 472 Y+ A A+ PTAAVL+RRNADAA +A+ LR++G+P EVVGL GLL PEVA+V+AML Sbjct 424 EYEAARAEDRPTPTAAVLIRRNADAAPLAEALRSKGLPVEVVGLGGLLHTPEVADVIAML 483 Query 473 RLVADPTAGAAAMRVLTGPRWRLGARDLAALWRRALTLS-----GESPSTASPESIAMAA 527 R+VADP AG+AA+R+LTG RW++GA+DLAAL +R+ L+ G + + E++ A Sbjct 484 RVVADPLAGSAAVRLLTGARWQIGAKDLAALSQRSRELAISAGYGTAGAVTDAEALTSAV 543 Query 528 S-----ADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEV 582 +A+ L D+ISDPG AE YS GY RI A+A EL++LR R+G L +LVAEV Sbjct 544 QDALPGENAEQAGLVDSISDPGPAERYSALGYTRINAIAAELASLRERIGQPLTELVAEV 603 Query 583 RRVLGVDCEVRASAPVS-GGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVA 641 RVLG+ E A V G AG EHLDAFADVVA YA R + A++ G+LA+ A Sbjct 604 ERVLGIGIEAGARTRVGVVGTAGREHLDAFADVVANYATRPT-----ANLPGMLAFFAAA 658 Query 642 EVVENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAE 701 E +E GL P E+ VA DRVQ+LTVH+AKGLEW+VVA+ H+S GVFPS+ + SWL AE Sbjct 659 EQIEKGLTPGEVEVAPDRVQILTVHSAKGLEWEVVAIPHVSDGVFPSSTASGSWLGALAE 718 Query 702 LPPLLRGDRA--SAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAV 759 LPP LRGDRA + A G+PVLD + +RK L + I+ H++ L RR+DE+RRL YVA+ Sbjct 719 LPPSLRGDRAVDADSADGVPVLDLEELYNRKDLENAITAHKKALSNRRLDEDRRLFYVAL 778 Query 760 TRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDP-----CGVVEQWASAP 814 TR E L +S HHW +G++P+GPSEFL EL ++ A + GVVE+WA AP Sbjct 779 TRTERALFISAHHWAESGSEPKGPSEFLDELHQMVTAENDADEEDSRGAIGVVEEWAPAP 838 Query 815 AGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDA 874 D NPL A WP DPL ARRG VE GAA V +A+ A LP + P Sbjct 839 EPDTENPLAATPRTAQWPPDPLGARRGAVEAGAASVLSAL-ASLP-QDSQEAEEPEDDPE 896 Query 875 PWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHA 934 W++DVD LLAER A LP LSV+ LV+L DP RL LP P+P A Sbjct 897 NWASDVDVLLAEREARANARAEVILPAQLSVTQLVDLKADPDELAARLRRPLPYPPNPLA 956 Query 935 WLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVE 994 G AFHAW+++ +GA L DL +LPGAAD G +L LQ AF S WA R+P VE Sbjct 957 RRGTAFHAWIERRFGATRLLDLDELPGAADTGAGPETDLVKLQDAFLRSPWANRSPIEVE 1016 Query 995 VPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAV-QLAVYRLAWA 1053 VPFE I TV+RGRIDAVF DPDGG TV+DWKTG P AA A V QLA YR+AWA Sbjct 1017 VPFETSIAGTVLRGRIDAVFADPDGGWTVIDWKTGAEPS--AANEDAVVMQLAAYRVAWA 1074 Query 1054 ALRGC-----------PTSSVRTAFYYVRSGITVVPDELPAPGELAMLL 1091 L P VR AF+YVRSG T+ P+ LP LA L+ Sbjct 1075 ELMSARARSAGRNEQFPADKVRAAFHYVRSGRTIAPENLPDGEALARLI 1123 >gi|226305706|ref|YP_002765666.1| ATP-dependent DNA helicase [Rhodococcus erythropolis PR4] gi|226184823|dbj|BAH32927.1| putative ATP-dependent DNA helicase [Rhodococcus erythropolis PR4] Length=1130 Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust. Identities = 617/1128 (55%), Positives = 752/1128 (67%), Gaps = 47/1128 (4%) Query 2 TQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLV 61 TQ A + P +LA ALG PPT EQAAVIAAP GP +V+AGAGAGKTETMAARVVWLV Sbjct 5 TQKARRPKIDPVDLAVALGQHPPTPEQAAVIAAPLGPTLVVAGAGAGKTETMAARVVWLV 64 Query 62 ANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIG-LGCGDPA--------ACAPVV 112 ANG+ +P VLGLTFTRKAA QL R+R RLARLAG L DP A P V Sbjct 65 ANGFVDPEAVLGLTFTRKAAQQLTSRIRKRLARLAGSDVLRALDPTGGVRSRILAGEPEV 124 Query 113 STYHAFAGSLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIV 172 STYHA+AG LL ++GLLLP+EP LLSETELWQ+A VVSG+D L TDK+P ++T V Sbjct 125 STYHAYAGRLLSEHGLLLPIEPSATLLSETELWQVAHRVVSGWDSDLDTDKNPGSITETV 184 Query 173 VRLWGQLGEHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELV 232 + L GQL EHLVD L + H EL++L+H LPAG QR GPS+ LL L Q +R EL+ Sbjct 185 LALAGQLAEHLVDPEQLLEAHTELDKLIHTLPAGPKQRG-GPSKELLNYLDVQHKRIELL 243 Query 233 PLLDALGERMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRV 292 PL+ L E + +DF QM+ +AR+A+ P+VGQ R R+RVVLLDEYQDTGHAQRV Sbjct 244 PLVARLAETLRREGALDFGSQMSLSARVASEHPEVGQTERERFRVVLLDEYQDTGHAQRV 303 Query 293 VLSSLFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTS 352 +LSSLFGGG D LALTAVGDP+QSIYGWRGASA NLPRF TDFPL++G PAP LELLTS Sbjct 304 LLSSLFGGGTDGRLALTAVGDPMQSIYGWRGASAANLPRFATDFPLANGKPAPTLELLTS 363 Query 353 WRNPPQALRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRM 412 WRNPP+AL +AN SA RRR VAV LR RP A G VR ALL DV+ ER+W+A+ + Sbjct 364 WRNPPEALELANLSSAPLRRRGVAVSTLRARPGAVAGDVRLALLGDVEQERQWVAEKIAE 423 Query 413 RYQRAEADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAML 472 Y+ A A+ PTAAVL+RRNADAA +A+ LR++G+P EVVGL GLL PEVA+V+AML Sbjct 424 EYEAARAEDRPTPTAAVLIRRNADAAPLAEALRSKGLPVEVVGLGGLLHTPEVADVIAML 483 Query 473 RLVADPTAGAAAMRVLTGPRWRLGARDLAALWRRALTLS-----GESPSTASPESIAMAA 527 R+VADP AG+AA+R+LTG RW++GA+DLAAL +R+ L+ G + + E++ A Sbjct 484 RVVADPLAGSAAVRLLTGARWQIGAKDLAALSQRSRELAISAGYGTAGAVTDAEALTSAV 543 Query 528 -----SADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEV 582 +A+ L D+ISDPG AE YS GY RI A+A EL++LR R+G L +LVAEV Sbjct 544 HDALPGENAEQAGLVDSISDPGPAERYSALGYTRINAIAAELASLRERIGQPLTELVAEV 603 Query 583 RRVLGVDCEVRASAPVS-GGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVA 641 RVLG+ E A V G AG EHLDAFADVVA YA R + A++ G+LA+ A Sbjct 604 ERVLGIGIEAGARTRVGVVGTAGREHLDAFADVVANYATRPT-----ANLTGMLAFFAAA 658 Query 642 EVVENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAE 701 E +E GL P E+ VA DRVQ+LTVH+AKGLEW+VVA+ H+S GVFPS+ + SWL AE Sbjct 659 EQIEKGLTPGEVEVAPDRVQILTVHSAKGLEWEVVAIPHVSDGVFPSSTASGSWLGALAE 718 Query 702 LPPLLRGDRA--SAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAV 759 LPP LRGDRA + A G+PVLD + +RK L + I+ H++ L RR+DE+RRL YVA+ Sbjct 719 LPPSLRGDRAVDADSADGVPVLDLEELYNRKDLENAITAHKKALSNRRLDEDRRLFYVAL 778 Query 760 TRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDP-----CGVVEQWASAP 814 TR E L +S HHW +G +P+GPSEFL EL ++ AG+ GVVE+WA AP Sbjct 779 TRTERALFISAHHWAESGAEPKGPSEFLDELHQMVTADNDAGEEDSRGAIGVVEEWAPAP 838 Query 815 AGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDA 874 D NPL A WP DPL ARRG VE GAA V +A+ A LP + + + P Sbjct 839 EPDTENPLAATPRTAQWPPDPLGARRGAVEAGAASVLSAL-ASLPQDSEEAEE-PEDDPE 896 Query 875 PWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHA 934 W++DVD LLAER A LP LSV+ LV+L DP RL LP P+P A Sbjct 897 NWASDVDVLLAEREARANARAEVILPAQLSVTQLVDLKADPDELAARLRRPLPYPPNPLA 956 Query 935 WLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVE 994 G AFHAW+++ +GA L DL +LPGAAD G +L LQ AF S WA R+P VE Sbjct 957 RRGTAFHAWIERRFGATRLLDLDELPGAADTGAGPETDLVKLQDAFLRSPWANRSPIEVE 1016 Query 995 VPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAA 1054 VPFE I TV+RGRIDAVF DPDGG TV+DWKTG P A +QLA YR+AWA Sbjct 1017 VPFETSIAGTVLRGRIDAVFADPDGGWTVIDWKTGAEP-STANEDAVVMQLAAYRVAWAE 1075 Query 1055 LRGC-----------PTSSVRTAFYYVRSGITVVPDELPAPGELAMLL 1091 L P VR AF+YVRSG T+ P+ LP LA L+ Sbjct 1076 LMSARARSAGRNEQFPADKVRAAFHYVRSGRTIAPENLPDGEALARLI 1123 >gi|333921406|ref|YP_004494987.1| putative ATP-dependent DNA helicase [Amycolicicoccus subflavus DQS3-9A1] gi|333483627|gb|AEF42187.1| putative ATP-dependent DNA helicase [Amycolicicoccus subflavus DQS3-9A1] Length=1144 Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 611/1136 (54%), Positives = 734/1136 (65%), Gaps = 60/1136 (5%) Query 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 R++P++LA ALG PT EQ AVI AP GPL+V+AGAGAGKTETMAARVVWLVAN + P Sbjct 23 RFTPSQLAQALGQPQPTPEQQAVITAPAGPLLVVAGAGAGKTETMAARVVWLVANAFVHP 82 Query 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGL-GCGDPAA--CA------PVVSTYHAFA 119 VLGLTFTRKAA QL R+RSRLARLAG L DP+ CA P VSTYHA+A Sbjct 83 ENVLGLTFTRKAAHQLTTRIRSRLARLAGTQLLHSADPSGELCARLSMSEPEVSTYHAYA 142 Query 120 GSLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQL 179 G LL ++ L LP+EP LLSETELWQ+A VVS +DG L +++PA+VTS V+ L L Sbjct 143 GKLLAEHALRLPIEPSATLLSETELWQIAHRVVSAWDGDLDLERTPASVTSAVLALSAAL 202 Query 180 GEHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALG 239 EH++D L H+ELE+LVH LP G QR P+Q LL +LATQ QR +L+PL+ L Sbjct 203 DEHMIDIDDLSSAHLELEKLVHYLPPGSRQRQE-PNQRLLSLLATQHQRLQLLPLVQQLR 261 Query 240 ERMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFG 299 + +D+ QM+ AARLAA P+ GQ R RYRVVLLDEYQDTGHAQR++L+ LFG Sbjct 262 TVLREEGALDYGSQMSLAARLAANHPEAGQGERERYRVVLLDEYQDTGHAQRILLAGLFG 321 Query 300 GGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQA 359 G D LA+TAVGDPIQSIYGWRGASA NLPRF DFP DG+PAP LELLTSWRNP A Sbjct 322 NGTDPALAVTAVGDPIQSIYGWRGASAANLPRFAMDFPCGDGSPAPRLELLTSWRNPVTA 381 Query 360 LRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEA 419 L +AN +S R R V V L+PRP+A G V+ AL DV AER W+A + + Y A Sbjct 382 LSIANKVSEPLRCRGVPVSTLKPRPEAAEGEVQLALCGDVAAERRWVAQQMFLEYDAARE 441 Query 420 DGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPT 479 G PPTAAVLVRRN DAA +A+ + GIP EVVGL GLL PEV ++VAMLRL+ADP Sbjct 442 RGEPPPTAAVLVRRNRDAAPLAEAMHELGIPVEVVGLGGLLETPEVQDLVAMLRLIADPM 501 Query 480 AGAAAMRVLTGPRWRLGARDLAALWRRALTL---SGESPSTASP---------ESIAMAA 527 AG AA+RVLTG RWRLGA DLA+LW+RA L SG++ S S E+I A Sbjct 502 AGTAAVRVLTGARWRLGAADLASLWQRARELAIASGQNQSAVSTREELDNALDEAIPGEA 561 Query 528 SADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRV-- 585 A+ P ++DA++DPG+A+ YS AG+ RI L EL+ALR RLG L +LVA+V R Sbjct 562 ---AEQPGISDALADPGAADRYSSAGFARITELGRELAALRERLGQPLTELVADVERTVA 618 Query 586 LGVDCEVRASAPVSGG-WAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVV 644 LG++ E R AG EHLDAFADVVAGY AR AS+ GLLA+LD A V+ Sbjct 619 LGIETEARGFFLAENAPGAGREHLDAFADVVAGY-----ARHPAASLTGLLAFLDAAAVI 673 Query 645 ENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPP 704 ENGL P E VA DRVQ+LTVH+AKGLEW+VVA+ HL GVFPS+ S +WLT ++P Sbjct 674 ENGLAPGETQVAPDRVQILTVHSAKGLEWEVVAIPHLVEGVFPSSTSAETWLTSIGQIPS 733 Query 705 LLRGDRASA----GAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVT 760 LRGDR G+ G+PVL + DRKQL + I+ H+ R +DEERRLLYVA+T Sbjct 734 ALRGDRQDGSDGEGSDGVPVLKLENLNDRKQLEEVITRHQDAFKARGLDEERRLLYVALT 793 Query 761 RAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGV-VEQWASAPAGDER 819 R E L +SGH WG TG KP+GPS FL EL+D+ G+ G+ + +WA P + Sbjct 794 RTERVLCISGHQWGETGDKPKGPSLFLEELRDL-------GESGGISICEWAQTPGPGDV 846 Query 820 NPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDA-PWST 878 NPL WP DPL RR D+E GA+LV A+ S + D D W+ Sbjct 847 NPLATATRIVQWPIDPLGQRRADIEAGASLVFTALKRRKSSSAHEDDDQAETCDGLAWAA 906 Query 879 DVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGD 938 DVD LLAER +P HLSVS+LV L GDP+ RL LP P+P A G Sbjct 907 DVDVLLAERERRRTSEVLVEMPQHLSVSNLVALAGDPMELALRLRRPLPFPPNPLARRGT 966 Query 939 AFHAWVQQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFE 998 AFHAW+++ YGA L DL +LPGAAD +L LQ AF AS WA R+PA VEVPFE Sbjct 967 AFHAWLERRYGATRLLDLDELPGAADTGASPDADLEQLQEAFLASEWALRSPAEVEVPFE 1026 Query 999 MPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAAL--- 1055 IG TV+RGRIDAVF D DGG +VVDWKTG P GP ++QLA YR+AWA L Sbjct 1027 TTIGGTVLRGRIDAVFRDDDGGYSVVDWKTGAEP-GPRDRAAVSMQLAAYRIAWADLMAA 1085 Query 1056 RGCPTS--SVRTAFYYVRSGITVVPDELPAPGELAMLL--------TDCAGRRSDT 1101 RG P S VR AF+YVRSG T+ P +LP L LL TD AG T Sbjct 1086 RGTPVSLEKVRAAFHYVRSGRTIAPQDLPDKDGLRTLLANPGDTHHTDGAGSSEQT 1141 >gi|343927589|ref|ZP_08767057.1| putative ATP-dependent DNA helicase [Gordonia alkanivorans NBRC 16433] gi|343762230|dbj|GAA13983.1| putative ATP-dependent DNA helicase [Gordonia alkanivorans NBRC 16433] Length=1131 Score = 987 bits (2551), Expect = 0.0, Method: Compositional matrix adjust. Identities = 571/1120 (51%), Positives = 704/1120 (63%), Gaps = 50/1120 (4%) Query 15 LACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQVLGL 74 LA ALGL PT EQ AVI AP P++V+AGAGAGKTETMA+RVVWLVAN P ++LGL Sbjct 17 LAAALGLPDPTPEQVAVIEAPVEPMLVVAGAGAGKTETMASRVVWLVANQVVAPDEILGL 76 Query 75 TFTRKAAGQLLRRVRSRLARLAGI-GLGCGDPAACA--------PVVSTYHAFAGSLLRD 125 TFTRKAA +L R+R RL+ L+G L DP P VSTYHA+AG L+ D Sbjct 77 TFTRKAASELGARIRRRLSMLSGAPALRTWDPDGTLAARLRGADPEVSTYHAYAGRLIAD 136 Query 126 YGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVD 185 YGLLLP+EP + LL+ETELWQLAF +VS + G L T K PA VT V++L+G++ EHLVD Sbjct 137 YGLLLPVEPSSTLLTETELWQLAFSLVSSWPGELNTKKVPAGVTESVLKLYGEMSEHLVD 196 Query 186 TRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAG 245 L + L L+ LP G QRD+ P+Q LL++ +R EL+P++ ALGE M A Sbjct 197 IDDLTEAGSRLYELIDTLPKGPKQRDK-PTQALLKVKEVIDERRELIPMVIALGETMRAQ 255 Query 246 KVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGG--VD 303 +DF QM+ AA+L ++P+V R +R VLLDEYQDTGH+QRV+LS+LFGG Sbjct 256 SSLDFGSQMSLAAKLVVSNPEVVSAERTAFRAVLLDEYQDTGHSQRVLLSTLFGGHDPSR 315 Query 304 DGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVA 363 + +A+TAVGDPIQSIYGWRGASA NLPRF DFP DGTPA ELLTSWRN Q LR+A Sbjct 316 ESVAVTAVGDPIQSIYGWRGASAANLPRFARDFPRPDGTPAERRELLTSWRNAAQGLRLA 375 Query 364 NGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVK 423 N IS E RRR + V LRPRPDAP G AL V ER WIAD + RY+ AE G Sbjct 376 NQISEELRRRGIPVSILRPRPDAPHGTATIALTETVLDERNWIADAVERRYRAAETAGEA 435 Query 424 PPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAA 483 PPT A+LVRRN D+A +A L +RGIP EVVG+ GLL +PE+ ++VA LR++ADP AG A Sbjct 436 PPTTAILVRRNEDSAPLAAELESRGIPTEVVGIGGLLHVPEIEDIVATLRVMADPMAGTA 495 Query 484 AMRVLTGPRWRLGARDLAALWRRALTLSGESPSTA-----SPESI-----AMAASADADN 533 MR+LTG RWRLGA+DLAALWRRA TL+ ES + A S E + A+ + D Sbjct 496 VMRLLTGARWRLGAKDLAALWRRATTLAAESYAEAGGVVTSREQLDAALDAVLPTEIVDR 555 Query 534 PCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVR 593 +ADA+ DPG YS GY RI A +L +L R+G LP+LVA+V +GV E + Sbjct 556 AGIADAVVDPGDPTDYSPEGYARIRAFGAQLESLHRRIGQPLPELVADVENTIGVGVEAQ 615 Query 594 ASA-PVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAE 652 A + G G EHLDAFAD V+ YA+R A++ GLLA+LD AE +E GL P + Sbjct 616 IRARRMRGAITGREHLDAFADYVSHYADRPG-----ANLPGLLAFLDAAESIEKGLEPGK 670 Query 653 LTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGD--- 709 + VA RVQ+LTVHAAKGLEW VVA+ HL++G+FPS + ++WL ELP LRGD Sbjct 671 IEVAEQRVQILTVHAAKGLEWDVVAIPHLAKGIFPSAKADTTWLGSARELPADLRGDLAI 730 Query 710 ---RASAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTL 766 A G P+L V DRKQL D +S+H+ + RR++E+RRLLYVA+TRA L Sbjct 731 PAESADGTPEGFPLLKIDTVGDRKQLEDALSDHKAAIGERRLEEDRRLLYVALTRARHDL 790 Query 767 LVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAA--AGDPCGV-VEQWASAPAGDERNPLC 823 ++S HHW TG KPRG S+F EL ID + A D G+ + PA D NPL Sbjct 791 MISAHHWSETGDKPRGGSDFFDELMVAIDEAITDPAVDSTGLSIAVRTPPPAEDATNPLA 850 Query 824 DNAIEAVWPADPLAARRGDVERGAALVAAAMSA----------DLPGSTTDIDHPPRPGD 873 + + WP DPLA RR V+ A LV A++A D + PP P D Sbjct 851 ERVVAQPWPRDPLAGRRDAVQAAADLVLDAITAREAPALFEAPDASDGPEMLPMPPDPED 910 Query 874 --APWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPD 931 A W +V ALLAE A + LP HLSVS LVEL D +RL P RP+ Sbjct 911 EVAAWEAEVSALLAEHHQANQALVEVTLPTHLSVSQLVELDADEAEFARRLRRPTPFRPN 970 Query 932 PHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPA 991 P A G AFHAWV++++GA L D+ +LPGAAD +L AL+ AF AS WA R+P Sbjct 971 PMARRGTAFHAWVERWFGATRLLDIDELPGAADATASPDADLDALRDAFLASRWANRSPT 1030 Query 992 AVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLA 1051 VEVPFE IG VVRGRIDAVF + DG TVVDWKTG P PA +QLA YR+A Sbjct 1031 EVEVPFETVIGGIVVRGRIDAVFAEKDGSWTVVDWKTGVVPE-PAKRESLFIQLAAYRIA 1089 Query 1052 WAALRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAMLL 1091 WA L G P V AF+YVR G T+ D+LP LA L Sbjct 1090 WAQLAGVPVEKVHAAFHYVRDGHTLEADDLPDEATLAAKL 1129 >gi|289751887|ref|ZP_06511265.1| superfamily protein I DNA and RNA helicase [Mycobacterium tuberculosis T92] gi|289692474|gb|EFD59903.1| superfamily protein I DNA and RNA helicase [Mycobacterium tuberculosis T92] Length=488 Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust. Identities = 487/488 (99%), Positives = 488/488 (100%), Gaps = 0/488 (0%) Query 614 VVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRVQVLTVHAAKGLEW 673 +VAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRVQVLTVHAAKGLEW Sbjct 1 MVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRVQVLTVHAAKGLEW 60 Query 674 QVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRKQLS 733 QVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRKQLS Sbjct 61 QVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRKQLS 120 Query 734 DKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDI 793 DKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDI Sbjct 121 DKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDI 180 Query 794 IDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAA 853 IDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAA Sbjct 181 IDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAA 240 Query 854 MSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVG 913 MSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVG Sbjct 241 MSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVG 300 Query 914 DPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEEL 973 DPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEEL Sbjct 301 DPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEEL 360 Query 974 AALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPH 1033 AALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPH Sbjct 361 AALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPH 420 Query 1034 GPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAMLLTD 1093 GPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAMLLTD Sbjct 421 GPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAMLLTD 480 Query 1094 CAGRRSDT 1101 CAGRRSDT Sbjct 481 CAGRRSDT 488 >gi|262203378|ref|YP_003274586.1| UvrD/REP helicase [Gordonia bronchialis DSM 43247] gi|262086725|gb|ACY22693.1| UvrD/REP helicase [Gordonia bronchialis DSM 43247] Length=1119 Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/1121 (52%), Positives = 706/1121 (63%), Gaps = 49/1121 (4%) Query 11 SPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQ 70 S LA ALGL PTAEQAAVI P P++V+AGAGAGKTETMAARVVWLVAN P + Sbjct 3 SATSLAAALGLPTPTAEQAAVIEGPIEPMLVVAGAGAGKTETMAARVVWLVANQLIGPDE 62 Query 71 VLGLTFTRKAAGQLLRRVRSRLARLAGI-GLGCGDPAACA--------PVVSTYHAFAGS 121 +LGLTFTRKAA +L R+R RL+ L+G L DP P VSTYHA+AG Sbjct 63 ILGLTFTRKAASELGARIRRRLSMLSGSPALRSWDPEGTLAARLRGADPEVSTYHAYAGR 122 Query 122 LLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGE 181 L+ DYGLLLP+EP++ LLSETELWQLAF +V+ + L T K PA+VT V++L+G++ E Sbjct 123 LISDYGLLLPVEPNSTLLSETELWQLAFSLVANWPDELHTTKVPASVTEAVLKLYGEMAE 182 Query 182 HLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGER 241 HLVD L +L ++ LP G QR GP+Q LL++ +R EL+P++ AL E Sbjct 183 HLVDIDDLARAGSDLYEMIPTLPKGPKQRG-GPNQALLKIRDVIDERRELIPMVTALAEA 241 Query 242 MHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGG 301 M +DF QM+ AARL +P+V R+ +R VLLDEYQDTGH+QRV+LS+LFGG Sbjct 242 MREQSALDFGSQMSLAARLVVGNPEVVAAERKAFRAVLLDEYQDTGHSQRVLLSTLFGGT 301 Query 302 VDDG-LALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 D +A+TAVGDPIQSIYGWRGASA NLPRF DFP +DG+PA ELLTSWRN L Sbjct 302 SRDAPVAVTAVGDPIQSIYGWRGASAANLPRFAGDFPAADGSPADRRELLTSWRNAEVVL 361 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 R+AN +SAE RRR + V LR RPDAP G+ AL V EREWIAD + R++ AE D Sbjct 362 RLANHVSAELRRRGIPVSVLRARPDAPSGSAHIALTETVVDEREWIADAIETRWRAAEND 421 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 G PPT A+LVRRN D+A +A L RGIPAEVVG+ GLL +PEV +VV+ LRL+ADP A Sbjct 422 GQAPPTTAILVRRNEDSAPLAAELERRGIPAEVVGIGGLLHVPEVTDVVSTLRLMADPMA 481 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIA---MAASADA------ 531 G AAMR+LTG RWRLGA DLAALWRRA L+ E + A + + A+ DA Sbjct 482 GTAAMRLLTGARWRLGAADLAALWRRAAELAAEEIAAAGGAVTSREQLDAALDAVLPTEV 541 Query 532 -DNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDC 590 D +ADA+ DPG YS GY RI A +L +LR R+G LP+LVA+V +GV Sbjct 542 VDRAGIADAVVDPGDPSRYSPDGYARIRAFGAQLESLRRRIGQPLPELVADVENTIGVGV 601 Query 591 EVRASA-PVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLP 649 E + A + G G EHLDAFA+ V YA+R A + GLLA+L+ AE +E GL Sbjct 602 EAQIRARRMRGAITGREHLDAFAEYVTRYADRRG-----ADLPGLLAFLETAETIEKGLE 656 Query 650 PAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGD 709 P + VA RVQ+LTVHAAKGLEW VVA+ HL +FP + ++WL ELP LRGD Sbjct 657 PGRIEVAEQRVQILTVHAAKGLEWDVVAIPHLCHNIFPGGKAETTWLGSARELPGELRGD 716 Query 710 RA------SAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAE 763 A SA G PVLD AV DRK+L D I+ ++ + RR++E+RRLLYVA+TRA Sbjct 717 LAIAAEQGSAHPEGYPVLDLHAVTDRKELEDTIATYKEAIADRRLEEDRRLLYVALTRAR 776 Query 764 DTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCG-----VVEQWASAPAGDE 818 LL+S HHW +G KPRG SEF EL I S A DP VV+ A P Sbjct 777 HDLLISAHHWSESGDKPRGGSEFFTELLTAI--SDAVDDPTVESGGLVVDVLAPEPDDGA 834 Query 819 RNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRP-GD---- 873 NPL + + A WPADPLA RR V A LV A ++A + D D P GD Sbjct 835 PNPLAERVLAAPWPADPLAGRRDGVRAAADLVLAEIAARDAPALFDTDGAPESDGDPDLS 894 Query 874 ---APWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRP 930 A W +V ALL ER + + LP HLSVS LVEL D +RL P RP Sbjct 895 DEIAAWEAEVSALLVEREASNQALVEVELPTHLSVSQLVELDADEAEFARRLRRPTPFRP 954 Query 931 DPHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTP 990 +P A G AFHAWV++++GA L D+ +LPGAAD +L AL+ AF AS WA R+P Sbjct 955 NPTARRGTAFHAWVERWFGATRLLDIDELPGAADATATPDADLDALRDAFLASPWANRSP 1014 Query 991 AAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRL 1050 + VEVPFE I VVRGRIDAVF DPDGG TV+DWKTG P PA +QLA YR+ Sbjct 1015 SEVEVPFETVIAGIVVRGRIDAVFADPDGGWTVIDWKTGVVPE-PARRESLFIQLAAYRI 1073 Query 1051 AWAALRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAMLL 1091 AWA L G P VR AF+YVRSG T+ DELP LA L Sbjct 1074 AWAQLAGVPVDRVRAAFHYVRSGHTLAADELPDESVLAAKL 1114 >gi|296138860|ref|YP_003646103.1| UvrD/REP helicase [Tsukamurella paurometabola DSM 20162] gi|296026994|gb|ADG77764.1| UvrD/REP helicase [Tsukamurella paurometabola DSM 20162] Length=1111 Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust. Identities = 580/1112 (53%), Positives = 701/1112 (64%), Gaps = 46/1112 (4%) Query 11 SPAELACALGL-FPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPG 69 S +LA LG F PT EQ AVI AP GP +V+AGAGAGKTETMA RVVWL+AN Y P Sbjct 16 SAEDLAYELGQAFAPTQEQRAVIEAPLGPCLVVAGAGAGKTETMAGRVVWLIANRYVTPD 75 Query 70 QVLGLTFTRKAAGQLLRRVRSRLARL-AGIGLGCGDPA--------ACAPVVSTYHAFAG 120 QVLGLTFTRKAA QL+ RVR RL+RL A L DP+ P +STYHA+AG Sbjct 76 QVLGLTFTRKAAQQLMIRVRKRLSRLGAAPALERIDPSGELRVLLRTVEPEISTYHAYAG 135 Query 121 SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG 180 L DYG+LLP+EP RL+SETE WQ+AFDVV+G+D L TDK+PA +T V+ L G L Sbjct 136 RLHGDYGMLLPVEPTVRLVSETERWQIAFDVVTGWDEALETDKNPATLTEQVLGLSGALA 195 Query 181 EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE 240 +HLV L + ELERL+ LP G QR P+ LL+ Q QR L+PL+ A+ Sbjct 196 DHLVTPDQLEASDDELERLIGLLPPGPRQR-AAPNAALLKAADVQEQRRALIPLVRAVAA 254 Query 241 RMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG 300 M +V+DF QM AA+LA +P V R R+ VLLDEYQDTGHAQR++L+SLFGG Sbjct 255 EMRVREVLDFGSQMGLAAQLALANPDVAALERSRFGAVLLDEYQDTGHAQRMLLASLFGG 314 Query 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL 360 A+TAVGDPIQSIYGWRGASA NLPRF TDFP +DG PAP ELLTSWRNP AL Sbjct 315 P-GGAAAVTAVGDPIQSIYGWRGASAANLPRFATDFPQADGMPAPRRELLTSWRNPTGAL 373 Query 361 RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD 420 +AN +S + RRR V V LR RPDAP G +R AL V ER W+AD + ++ Sbjct 374 SLANAVSEDLRRRGVPVSELRARPDAPSGDLRIALHSTVIDERTWVADAITALWRGRLDA 433 Query 421 GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA 480 G PPT AVLVRRNAD+A +A L RG+P EVVGL GLL PEV ++VA+LRL +P A Sbjct 434 GDPPPTVAVLVRRNADSAGLAAALGERGVPVEVVGLGGLLHTPEVQDLVALLRLAVEPLA 493 Query 481 GAAAMRVLTGPRWRLGARDLAALWRRALTL---SGESPSTASPESIAMAASADADNPC-- 535 G AAMR+LTGPRW+LGA DL ALW RA + +G + + + + + DA P Sbjct 494 GTAAMRLLTGPRWQLGAADLRALWNRARRIAHGTGRAATGLVTTADELDQALDATLPAEL 553 Query 536 -----LADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDC 590 L DAI+DPG YS AG +I +L E+ +R RLGH LP++VAE RVLGV Sbjct 554 LDAAGLGDAIADPGPDSDYSAAGLAKIRSLDREIRNVRERLGHPLPEVVAEAERVLGVSI 613 Query 591 E--VRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGL 648 E +RA+ + G G EHLDAFADVV YAER + A++ GLL++L AE VE GL Sbjct 614 ETRIRAARQLGGRATGREHLDAFADVVVSYAERPT-----ATLPGLLSFLAAAEAVEGGL 668 Query 649 PPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRG 708 P ++ VA DRVQVLTVH+AKGLEW VVAV HLS G+FPS + +WL+ PAELPP LRG Sbjct 669 TPGDVEVATDRVQVLTVHSAKGLEWDVVAVPHLSEGIFPSNRAMPTWLSTPAELPPELRG 728 Query 709 DRASAG-AHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLL 767 D A G + G+P LD S +RK L D + HR L + E+ RL YVAVTR + TLL Sbjct 729 DVAEPGESDGVPRLDLSECNNRKDLEDALDTHRAALKAMNMHEDERLFYVAVTRTQGTLL 788 Query 768 VSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAI 827 +SGH+W + PS FL ++ + V WA+ P D NPL + Sbjct 789 LSGHYWSEDVKTAKAPSRFLDRAREHAPEA---------VGHWAATPVDDAENPLEAEPV 839 Query 828 EAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAP--WSTDVDALLA 885 +A WP D LAA R D + A + A AD G+ D PG+ P W+ DV ALLA Sbjct 840 QAPWPRDFLAAHRADAD-AGAALVLAALADPDGTEADARA---PGEDPHGWAADVTALLA 895 Query 886 ERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQ 945 ERA A +P +SVS LVEL P +RL +P RP+P+A G AFHAW++ Sbjct 896 ERARQAAMDLEVAVPREVSVSQLVELRRSPETFARRLRRPVPYRPNPYARRGTAFHAWLE 955 Query 946 QFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTV 1005 + YGA L D +LPGAAD + G E LA LQR F S WAARTP +EVPFE+ TV Sbjct 956 RRYGASRLLDFDELPGAADGDAGADENLALLQRRFEESEWAARTPVDIEVPFEIAAAGTV 1015 Query 1006 VRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRT 1065 VRGR+DAVF DP GG TVVDWKTG P PA R AAVQLA YRLAWA LR P VR Sbjct 1016 VRGRMDAVFRDPGGGFTVVDWKTGVRPSEPADERAAAVQLAAYRLAWARLRDVPVDEVRA 1075 Query 1066 AFYYVRSGITVVPDELPAPGELAMLLTDCAGR 1097 AF+YVRSG TV P +L L +L+T AGR Sbjct 1076 AFFYVRSGETVSPSDLLDHAGLELLIT-SAGR 1106 >gi|54026511|ref|YP_120753.1| putative DNA helicase [Nocardia farcinica IFM 10152] gi|54018019|dbj|BAD59389.1| putative DNA helicase [Nocardia farcinica IFM 10152] Length=1184 Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust. Identities = 596/1187 (51%), Positives = 727/1187 (62%), Gaps = 106/1187 (8%) Query 11 SPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQ 70 SP +A ALGL PPT EQAAVIAAPPGP +V+AGAGAGKTETMAARVVW+VAN P Q Sbjct 4 SPHRIADALGLPPPTDEQAAVIAAPPGPTLVVAGAGAGKTETMAARVVWMVANRLVLPEQ 63 Query 71 VLGLTFTRKAAGQLLRRVRSRLARLAGIGL-----GCGDP----AACAPVVSTYHAFAGS 121 VLGLTFTRKAA QL R+R+RLARLAG L G+ A P +STYH++AG Sbjct 64 VLGLTFTRKAAQQLTARIRTRLARLAGSALLRELDSGGELRAQLAGAEPEISTYHSYAGR 123 Query 122 LLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGE 181 LL ++GLLLP+EP LL+ET+LWQLA VV +DG L T+++P +VT V+ L GQL E Sbjct 124 LLSEHGLLLPVEPSATLLTETQLWQLAHQVVRNWDGDLDTERTPVSVTEAVLALSGQLAE 183 Query 182 HLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGER 241 HLV+ L + H ELE+L++ LPAG QR GPS+ L ++ Q +R L+PL+ AL + Sbjct 184 HLVEPEELAEAHAELEKLINTLPAGPRQRG-GPSKALRDIVRVQHERVALLPLVRALNDA 242 Query 242 MHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGG 301 + +DF QM+ AARLAA P+V + R R+R+VLLDEYQDTGHAQRV+LS+LFGG Sbjct 243 LRRRGALDFGAQMSLAARLAAEHPEVAEAERGRFRLVLLDEYQDTGHAQRVLLSALFGGA 302 Query 302 VDDGL----------ALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLT 351 D A+TAVGDP+QSIYGWRGASA NLPRF TDFP + G PAP+L LLT Sbjct 303 AGDPEGTAGGRAPRPAVTAVGDPMQSIYGWRGASAANLPRFATDFPCAPGAPAPILPLLT 362 Query 352 SWRNPPQALRVANGISAEARRRS-----VAVRALRPRPDAPPGAVRCALLPDVQAEREWI 406 SWRNPP+AL +AN ++ R+ + V ALR +P A PG V AL V ER W+ Sbjct 363 SWRNPPEALALANLVAEPLRQAAREAGGATVDALRAKPGAEPGVVALALTETVVDERGWV 422 Query 407 ADHLRMRYQRAEADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVA 466 A+ + + A G PPT+AVLVRRNADAA +A+ LR +G+P E+VGL GLL+ PEVA Sbjct 423 AERIAAEWAARRAAGEPPPTSAVLVRRNADAAPLAEALREQGLPVEIVGLGGLLATPEVA 482 Query 467 EVVAMLRLVADPTAGAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMA 526 ++VA LRL+A+P AG+AA+RVLTG RWR+G DLAAL RRA LS TA I Sbjct 483 DIVATLRLIAEPAAGSAALRVLTGARWRIGVADLAALSRRARELSVVRTDTAVGAEITDG 542 Query 527 ASADA----------DNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLP 576 A+ +A + LADAI+DPG AE YS AGY RI AL EL+ALR R G L Sbjct 543 AALEAALREVTPEPVEQAGLADAIADPGPAENYSAAGYQRIEALGRELAALRERSGQPLT 602 Query 577 DLVAEVRRVLGVDCEVRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLA 636 +LVA+V R +GV E +A V G AG EHLDAFA+VVAGYA AS+ GLLA Sbjct 603 ELVADVERTIGVGVETQARRAVLGAGAGREHLDAFAEVVAGYAA-----DPGASLGGLLA 657 Query 637 YLDVAEVVENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWL 696 +L AE VENGL P E+ VA DRVQVLTVHAAKGLEW++VAV H+ R VFPS + +WL Sbjct 658 FLTAAESVENGLEPGEVEVAKDRVQVLTVHAAKGLEWEIVAVPHVVRRVFPSGTAGGTWL 717 Query 697 TDPAELPPLLRGDR-ASAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLL 755 AELP LRGDR A A G+PVLD + + DR L ++ H+ L+RRR+DEERRL Sbjct 718 GALAELPTALRGDRVAEDAAEGVPVLDLTDLYDRADLERALAAHKAALERRRIDEERRLF 777 Query 756 YVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPA 815 YVA+TR E LLVS HHW TG P+GPS+FL ELK + + +W P Sbjct 778 YVALTRTERVLLVSAHHWAETG-DPKGPSDFLLELKSAAETPGGPAHGAVEIARWDDPPP 836 Query 816 GDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMS-------------------- 855 D NP DN A WP DPL RR VE+GAALV AA++ Sbjct 837 VDAVNPFADNPATAEWPRDPLGPRRDPVEQGAALVRAALAELRAPAGPRAPAVPHAPAVP 896 Query 856 -----------------ADLPGSTTD--------------IDHPPRPGDAP-WSTDVDAL 883 LP + D D P P D W+ DVDAL Sbjct 897 RPAPRHTPTVPPPTDTDGPLPSAPNDDVPQPQSPCLDPVVTDVPTDPDDPEGWAADVDAL 956 Query 884 LAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAW 943 LAE R A LP L ++LVEL DP +RL LP P+P A G AFHAW Sbjct 957 LAEHEATVRAAREVELPGQLPATALVELRADPAKLARRLRRPLPYPPNPLARRGTAFHAW 1016 Query 944 VQQFYGAELLFDLGDLPGAADREVGDPE---ELAALQRAFTASSWAARTPAAVEVPFEMP 1000 VQ+++ L +LPGA + + G+ ELA +Q AF S+WA R+P VEVPFE Sbjct 1017 VQRWFSGTRLLGFDELPGAGEPDPGEAAADAELARMQDAFLNSAWAHRSPIDVEVPFETS 1076 Query 1001 IGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPT 1060 I TV+RGR+DAVF +PDG VVDWKTG P P A+QLA+YRLAWA L T Sbjct 1077 IAGTVIRGRMDAVFAEPDGRWVVVDWKTGAEPD-PGDEPAVAMQLAIYRLAWARLMAART 1135 Query 1061 SS--------VRTAFYYVRSGITVVPDELPAPGELAMLLTDCAGRRS 1099 V AF+YVRSG T+ P +LP P ELA L+ A R Sbjct 1136 GGDEQAMLHRVDAAFHYVRSGRTIAPADLPGPDELAELIRAAAPPRE 1182 >gi|326383310|ref|ZP_08204998.1| UvrD/REP helicase [Gordonia neofelifaecis NRRL B-59395] gi|326198060|gb|EGD55246.1| UvrD/REP helicase [Gordonia neofelifaecis NRRL B-59395] Length=1117 Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust. Identities = 569/1113 (52%), Positives = 688/1113 (62%), Gaps = 39/1113 (3%) Query 15 LACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQVLGL 74 LA ALGL PT EQ VI AP P++V+AGAGAGKTETMA+RVVWLVAN P ++LGL Sbjct 12 LASALGLPQPTPEQIEVIEAPMEPMLVVAGAGAGKTETMASRVVWLVANRLVGPEEILGL 71 Query 75 TFTRKAAGQLLRRVRSRLARLAGI-GLGCGDPA--------ACAPVVSTYHAFAGSLLRD 125 TFTRKAA +L R+R RL+ LAG L DP + VSTYHA+AG L+ D Sbjct 72 TFTRKAASELAARIRRRLSMLAGSPALLEWDPGGELASRLRSADAEVSTYHAYAGRLIAD 131 Query 126 YGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVD 185 YGLLLP+EP LLSETELWQLAF VV+ + G L T K PA+VT V+RL+ ++ EHLV Sbjct 132 YGLLLPVEPTATLLSETELWQLAFSVVASWPGELKTAKVPASVTEAVLRLYSEMAEHLVG 191 Query 186 TRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAG 245 L +L R++ LP G QR PSQ L A +R EL+PL+ AL E M A Sbjct 192 VDELSAAGADLYRMIDTLPKGPGQRAE-PSQKLRAYQAVMDERRELIPLVVALREAMSAQ 250 Query 246 KVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDG 305 +DF QM+ AARL A P+V R + VLLDEYQDTGH+QR++LSSLFGG G Sbjct 251 GALDFGSQMSLAARLVAEHPEVVDAERAGIKAVLLDEYQDTGHSQRILLSSLFGGHAIGG 310 Query 306 ---LALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRV 362 +A+TAVGDPIQSIYGWRGASA NLPRF DFP D A ELLTSWRN AL + Sbjct 311 RRAIAVTAVGDPIQSIYGWRGASAANLPRFARDFPRPDSRDAHRRELLTSWRNCRGALYL 370 Query 363 ANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGV 422 AN S E RRR V V LRPRPDAP G VR AL V EREWIAD + Y A+ DGV Sbjct 371 ANQTSEELRRRGVPVSVLRPRPDAPDGTVRLALTETVIDEREWIADCIEDYYATAQRDGV 430 Query 423 KPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGA 482 PPT A+LVRRN D+A +A L RG+PAEVVG+ GLL +PE+ ++VA LRL+ADP AG Sbjct 431 APPTTAILVRRNEDSAPLAAELERRGVPAEVVGIGGLLHVPEITDIVATLRLMADPMAGT 490 Query 483 AAMRVLTGPRWRLGARDLAALWRRALTLS--GESPSTASPESIAMAASAD--------AD 532 AAMR+LTG RW+LGA DLAALWRRA L+ +P+T + S A D Sbjct 491 AAMRLLTGARWQLGAADLAALWRRARELAAGAGAPTTGAVTSREALDDALDAALPGEAVD 550 Query 533 NPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEV 592 + L DA++DPG YS AG+ RI +L LR RLG LP+LVA+V + +GV E Sbjct 551 SAGLCDALADPGDQSRYSAAGFERIVTFGRQLDGLRRRLGQPLPELVADVEQTIGVAVEA 610 Query 593 RASA-PVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPA 651 + A + G G EHLDAFAD V YA+R S A++ GLLA+LD AEVVE GL Sbjct 611 QIRARRMRGEVTGREHLDAFADYVTHYADR-----SGATLPGLLAFLDAAEVVEKGLEAG 665 Query 652 ELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRA 711 ++ VA RVQ+LTVHAAKGLEW VVA+ H++ +FPS + ++WL P ELP LRGD + Sbjct 666 QVEVAQQRVQILTVHAAKGLEWDVVALPHVADRIFPSGKAETTWLGSPRELPAELRGDLS 725 Query 712 SAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGH 771 G G P LD + VADRK+L I +H+ + +RR++E+RRLLYVA+TRA+ TLLVS H Sbjct 726 RDGDEGFPPLDLTEVADRKELEAAIDDHKEAIGQRRLEEDRRLLYVALTRAKQTLLVSAH 785 Query 772 HWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGV------VEQWASAPAGDERNPLCDN 825 HW TG +PRG SEF EL ++ +AA G ++ A P + NPL + Sbjct 786 HWSETGDRPRGGSEFYTELAALVADAAAGGAAESAEASAFRIDVDAPPPDPEATNPLTER 845 Query 826 AIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLA 885 I WP D L RR + A LV +M A+ D P W +V LL Sbjct 846 QISIGWPVDLLGERRAPMVAAAELV-DSMRAERALFAVADDEPADADAREWRREVQVLLD 904 Query 886 ERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQ 945 ERA A LP HLSVS LVEL D RL +P RP+P A G AFHAWV+ Sbjct 905 ERAQAVDPMVDVELPGHLSVSQLVELDSDQEAFAARLRRPVPYRPNPMARRGTAFHAWVE 964 Query 946 QFYGAELLFDLGDLPGAADREVGDPEELAALQRA-FTASSWAARTPAAVEVPFEMPIGDT 1004 + +GA L D+ +LPGAAD G E+ L RA F AS WA RTP VEV FE IG T Sbjct 965 RRFGATRLLDVDELPGAADAVAGAVEDDLTLLRAKFLASPWADRTPQEVEVGFETVIGST 1024 Query 1005 VVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVR 1064 VVRGR+DAVF D + GA VVDWKTG P PA +QLA YR+AW+ L G P VR Sbjct 1025 VVRGRMDAVFADGE-GALVVDWKTGAVPE-PARRAPLFIQLAAYRIAWSQLSGVPLEKVR 1082 Query 1065 TAFYYVRSGITVVPDELPAPGELAMLLTDCAGR 1097 AF YVR T+ P +LP P ELA +L D R Sbjct 1083 AAFVYVRHDYTLEPADLPGPDELAQILADPGHR 1115 >gi|134097674|ref|YP_001103335.1| ATP-dependent DNA helicase [Saccharopolyspora erythraea NRRL 2338] gi|291006367|ref|ZP_06564340.1| ATP-dependent DNA helicase [Saccharopolyspora erythraea NRRL 2338] gi|133910297|emb|CAM00410.1| probable ATP-dependent DNA helicase [Saccharopolyspora erythraea NRRL 2338] Length=1078 Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust. Identities = 558/1088 (52%), Positives = 674/1088 (62%), Gaps = 46/1088 (4%) Query 11 SPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQ 70 +P +A ALGL PPT EQA VIAAPP P +V+AGAGAGKTETMAARVVWLVAN P + Sbjct 3 APQRIAHALGLHPPTPEQAEVIAAPPEPALVVAGAGAGKTETMAARVVWLVANRLVTPER 62 Query 71 VLGLTFTRKAAGQLLRRVRSRLARLAGIGL-GCGDPA--------ACAPVVSTYHAFAGS 121 VLGLTFTRKAA QL RVR+RL RLAG GL DP+ A P V TYHA+AG Sbjct 63 VLGLTFTRKAARQLADRVRARLRRLAGSGLLDEVDPSGELRSTVLAGEPTVLTYHAYAGR 122 Query 122 LLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGE 181 L+ ++GL +P+EP RLL+ET WQLA VVS + L TDK P+ VT ++ L G+L E Sbjct 123 LVGEHGLRVPVEPGARLLTETAAWQLAHRVVSTWTEDLDTDKVPSTVTGYLLSLAGELAE 182 Query 182 HLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGER 241 HLV LR L R + P + Q+ P L +++ATQ R L+PLL +R Sbjct 183 HLVRPDDLRAHAEALCRTIENAPRAKRQKAELPKD-LQKVVATQRLRVALLPLLAEYAQR 241 Query 242 MHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGG 301 MDFA QM+ AA LAA P+V R R+ VLLDEYQDTGHAQRV+L SLFG G Sbjct 242 KRREAAMDFADQMSLAAGLAAEHPEVVAGERERFGAVLLDEYQDTGHAQRVLLRSLFGQG 301 Query 302 VDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALR 361 + +T+VGDP Q+IYGWRGASA NLPRFTTDFP PA LLTS+RNPP+ LR Sbjct 302 --RTMPVTSVGDPAQAIYGWRGASAANLPRFTTDFPKDSMAPARRYGLLTSFRNPPEVLR 359 Query 362 VANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADG 421 VAN +SA R + V LR + A G +R AL DV+ ER+W+AD + ++ A + Sbjct 360 VANAVSAPLREAGLEVEELRAKDGAEAGDIRVALADDVRQERDWVADRIAAQWHAALDEN 419 Query 422 VKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAG 481 +PPTAAVLVRR AD A +A LR RG+P EVVGL GLL EV ++V+ LR++ DP AG Sbjct 420 GRPPTAAVLVRRRADMADLAAALRDRGLPVEVVGLGGLLDEAEVRDLVSALRMLVDPLAG 479 Query 482 AAAMRVLTGPRWRLGARDLAALWRRALTLSGE----SPSTASPESIAMAA--SADADNPC 535 AAMR+LTG RWRLGA D+AALW RA L GE +P + P + AA A+ Sbjct 480 TAAMRLLTGSRWRLGAADIAALWDRAREL-GERAFGAPESEDPTAAVAAALPGEHAEQAG 538 Query 536 LADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRAS 595 L DA+ DPG+AE YS GY RI L EL+ LR RL LP+LVA+V R L +D E S Sbjct 539 LVDALDDPGNAERYSEPGYQRIRRLGRELANLRRRLEQPLPELVADVERTLLLDIE---S 595 Query 596 APVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTV 655 GG AG HLDAFADVV +A S A++ LL YL AE E+GL P E+ V Sbjct 596 LSRPGG-AGRIHLDAFADVVTDFA----TASPSATLPALLDYLAAAERAEDGLEPGEVEV 650 Query 656 ACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGA 715 A DRVQVLTVHAAKGLEW+VVA+ HL R VFP SSWL ELP LRGD A Sbjct 651 ADDRVQVLTVHAAKGLEWEVVALPHLVRDVFPGKRKASSWLRAVTELPARLRGD-----A 705 Query 716 HGIPVLDTSAVA--DRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHW 773 +P LD + DRK++ + + H + RR+ EERRLLYVAVTR+E +LL+SGH W Sbjct 706 QDLPRLDLDRLQGMDRKEIVEALEAHDDEFEDRRLTEERRLLYVAVTRSERSLLLSGHWW 765 Query 774 GPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPA 833 G KP+GPS+FL +L +++ GVVEQW+ P D NPL + A WP Sbjct 766 AEGGDKPKGPSDFLLQLAEVV-----KSPDVGVVEQWSPQPPEDAPNPLAEAVRSAEWPV 820 Query 834 DPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARG 893 DPL RR V GA LV AA+ A D P + W+ DVD LLAERA AAR Sbjct 821 DPLGTRRDAVAEGANLVLAALDA------VDSAAPDEEDEDGWARDVDVLLAERAAAARR 874 Query 894 APARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELL 953 LP HLSVS LVEL D +RL LP P+P G AFH+W++ + + L Sbjct 875 RDQVRLPEHLSVSQLVELADDADALARRLRRPLPYPPNPMTRRGTAFHSWLEHRFTSTAL 934 Query 954 FDLGDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAV 1013 D +LPGAAD ++L LQ+AF A SWA RTP VEVPFE + VVRGR+DAV Sbjct 935 LDFDELPGAADESATPHDDLEMLQQAFLAGSWAERTPHRVEVPFETQVEGVVVRGRMDAV 994 Query 1014 FVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSG 1073 F D DGG TVVDWKTG P G +R +VQLA YRLAW+AL G P VR AF+YVR Sbjct 995 FADSDGGWTVVDWKTGAVPAGD-QVRALSVQLAAYRLAWSALSGAPLEKVRAAFHYVRHD 1053 Query 1074 ITVVPDEL 1081 T+ P +L Sbjct 1054 RTLRPADL 1061 >gi|300783060|ref|YP_003763351.1| ATP-dependent DNA helicase [Amycolatopsis mediterranei U32] gi|299792574|gb|ADJ42949.1| ATP-dependent DNA helicase [Amycolatopsis mediterranei U32] gi|340524439|gb|AEK39644.1| ATP-dependent DNA helicase [Amycolatopsis mediterranei S699] Length=1080 Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust. Identities = 536/1098 (49%), Positives = 663/1098 (61%), Gaps = 45/1098 (4%) Query 11 SPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQ 70 PAELA ALGL PT EQA VIAAP P +V+AGAGAGKTETMAARVVWLVANG P + Sbjct 11 EPAELADALGLHRPTPEQATVIAAPVEPSLVVAGAGAGKTETMAARVVWLVANGIVSPDR 70 Query 71 VLGLTFTRKAAGQLLRRVRSRLARLAGIGL-GCGDPA--------ACAPVVSTYHAFAGS 121 VLGLTFTRKAA QL RVR+RL RLAG GL DP A P V TYHA+AG Sbjct 71 VLGLTFTRKAARQLGERVRARLRRLAGSGLLDRLDPTGGLRSTVVAGEPTVLTYHAYAGR 130 Query 122 LLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGE 181 LL ++GL LP++P RLLSET WQ+A VVS +D L TD+ P VT+ ++ L G+LGE Sbjct 131 LLSEHGLRLPVQPGVRLLSETSSWQIAHRVVSTWDNELDTDRVPPTVTADLLALAGELGE 190 Query 182 HLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGER 241 HLV T L + L R++ P + QR P Q L ++A Q R L+PL+D R Sbjct 191 HLVSTEQLAEYTTWLCRVIENAPRAKGQRAALP-QKLTEIMAAQHFRLALLPLVDDYHRR 249 Query 242 MHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGG 301 +DFA QM+ AA+LA P V + R RY VLLDEYQDTGHAQRV+L +LFGG Sbjct 250 KRNEGALDFADQMSLAAQLAGGYPSVVRGERERYGAVLLDEYQDTGHAQRVLLRALFGGV 309 Query 302 VDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDG---TPAPVLELLTSWRNPPQ 358 + + +TAVGDP Q+IYGWRGASA NLPRFTTDFP DG PA LLTS+RNPP+ Sbjct 310 ENPPMPVTAVGDPAQAIYGWRGASAANLPRFTTDFPRFDGERLVPAHEFGLLTSFRNPPE 369 Query 359 ALRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAE 418 L +AN I+ R R + V LR R A P + CALLPD++AER W+AD L R+ + Sbjct 370 ILDLANAIAEPLRARGLGVERLRAREGAGPADIACALLPDIRAERAWVADALARRWYAHQ 429 Query 419 ADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADP 478 KPPTAAVLVRR AD A IA LRARG+P EVVGL GLL PEVA++V+ L+++ADP Sbjct 430 EQTGKPPTAAVLVRRRADMAPIAAELRARGLPVEVVGLGGLLDEPEVADLVSTLKVLADP 489 Query 479 TAGAAAMRVLTGPRWRLGARDLAALWRRALTLSG-ESPSTASPESIAMAASADADNPCLA 537 +G+AA R+LTG RWRL A D+AALWRRA LS E P T PE + + L Sbjct 490 LSGSAAARLLTGARWRLSAADVAALWRRAGELSSPEKPDT--PELVV----ERVEQAGLI 543 Query 538 DAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAP 597 DAI +PG YS GY RI + EL+ALR RL SLP+LVA+V R + +D E A Sbjct 544 DAIDEPGDPARYSDEGYKRIRRIGWELAALRRRLDQSLPELVADVERTMLLDVESLARP- 602 Query 598 VSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVAC 657 G AG HLDAFA+VV YAE A A++ + YL+ A E+GL P E+ V Sbjct 603 ---GSAGRAHLDAFAEVVTDYAETAPT----ATLLSFVDYLNTAAHAEDGLTPGEVEVVP 655 Query 658 DRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHG 717 DRVQVLTVH+AKGLEW+VVAV HL VFP SSWL LP LRGD A Sbjct 656 DRVQVLTVHSAKGLEWEVVAVPHLVHDVFPGRRRSSSWLRTATSLPAKLRGD-----AED 710 Query 718 IPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTG 777 +P L + DRK++ + + H R EERRL YVA+TR+E L+VSGH W + Sbjct 711 LPELRIAEGYDRKEVQEGLELHEAGFVEREQAEERRLCYVALTRSEHALIVSGHWWNESS 770 Query 778 TKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLA 837 ++ +GPSEFL E+ D++ + A G + +WA P D+ NPL ++ A WP DPL+ Sbjct 771 SRVKGPSEFLTEIADVVRETGA-----GQLAEWAPEPTEDDENPLVSDSRAARWPVDPLS 825 Query 838 ARRGDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPAR 897 RR V+ G LV+ A+++ S + W TD D LL E A Sbjct 826 DRRTGVQTGVELVSEALAS----SPDEEASEEDDDPDGWLTDTDVLLEEWARKDDHVKLV 881 Query 898 GLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLG 957 LP+ LSVS LV L D L LP P+ A G FH W+++ + + L ++ Sbjct 882 PLPSRLSVSQLVALADDAARLAADLRRPLPVEPNSFARRGTEFHGWLERRFAGDQLIEID 941 Query 958 DLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDP 1017 DLPGAAD + LQ F S WA+R P AVEV F + +RGR+DAVF DP Sbjct 942 DLPGAADFGEAPDADFEELQTEFEKSEWASRVPVAVEVTFSADVEGLTLRGRMDAVFADP 1001 Query 1018 DGGATVVDWKTGK-PPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITV 1076 +GG TVVDWKTG PP + + +VQLA YR+AWAAL+ P VR AF+YVR+ T+ Sbjct 1002 EGGWTVVDWKTGAVPPE--SRIPALSVQLAAYRMAWAALKNVPVEQVRAAFHYVRANRTI 1059 Query 1077 VPDELPAPGELAMLLTDC 1094 P +L P L LL D Sbjct 1060 RPADLLDPEALRSLLRDI 1077 >gi|302524415|ref|ZP_07276757.1| ATP-dependent DNA helicase [Streptomyces sp. AA4] gi|302433310|gb|EFL05126.1| ATP-dependent DNA helicase [Streptomyces sp. AA4] Length=1124 Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust. Identities = 543/1116 (49%), Positives = 660/1116 (60%), Gaps = 65/1116 (5%) Query 12 PAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQV 71 PAE+A ALGL PT EQA VIA+P P +V+AGAGAGKTETMAARVVWLVANG P +V Sbjct 12 PAEIADALGLHRPTPEQATVIASPVEPSLVVAGAGAGKTETMAARVVWLVANGIVSPERV 71 Query 72 LGLTFTRKAAGQLLRRVRSRLARLAGIGL-GCGDPA--------ACAPVVSTYHAFAGSL 122 LGLTFTRKAA QL RVR+RL RLAG GL DP+ A P V TYHA+AG L Sbjct 72 LGLTFTRKAARQLGERVRARLRRLAGSGLLERIDPSGALRATVVAGEPTVLTYHAYAGRL 131 Query 123 LRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEH 182 L ++GL LP++P RLLSET WQLA VVS +D L TD+ P VT+ ++ L G+LGEH Sbjct 132 LSEHGLRLPVQPGVRLLSETSSWQLAHRVVSTWDNDLDTDRVPPTVTAQLLALAGELGEH 191 Query 183 LVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERM 242 L+ T L L ++ P + QR P + L +LA Q R L+PL++ R Sbjct 192 LISTEQLGQYTEWLCEIIENAPRAKGQRASLPVK-LQEVLAAQRFRLALLPLVEDYHRRK 250 Query 243 HAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGV 302 A +DFA QM+ AA+LA P V R RY VLLDEYQDTGHAQRV+L SLFGG Sbjct 251 RAEGALDFADQMSLAAQLADGYPAVVAGERERYGAVLLDEYQDTGHAQRVLLRSLFGGVD 310 Query 303 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGT---PAPVLELLTSWRNPPQA 359 + +TAVGDP Q+IYGWRGASA NLPRFTTDFP A LLTS+RNPP+ Sbjct 311 HPPMPVTAVGDPAQAIYGWRGASAANLPRFTTDFPRRGEERLETAHEFGLLTSFRNPPEI 370 Query 360 LRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEA 419 L +AN IS R+R + V LR R A P + ALLPDV+AEREW+AD + R+ + Sbjct 371 LELANAISEPLRQRGLGVERLRARDGAGPADIAVALLPDVRAEREWVADAMAQRWHAEKE 430 Query 420 DGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPT 479 KPPTAAVLVRR AD A IA +R RG+P EVVGL GLL PEVA++V+ LR++ADP Sbjct 431 ASGKPPTAAVLVRRRADMAPIAAEMRMRGLPVEVVGLGGLLDEPEVADLVSTLRVLADPL 490 Query 480 AGAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADA 539 AG+AA R+LTG RWR+ A D+AALWRRA L+ P E + A A+ L DA Sbjct 491 AGSAAARLLTGARWRIAAADVAALWRRANELTSPEPRAKEGEEPELVAER-AEQAGLIDA 549 Query 540 ISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVS 599 + +PG+ E YS GY RI L EL+ALR RL SLP+LVA+V R + +D E A Sbjct 550 VDEPGAPERYSPEGYRRIRRLGAELTALRRRLDQSLPELVADVERTMLLDVESLARP--- 606 Query 600 GGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDR 659 G AG HLDAFA+VV YAE A A++ + YL+ A E+GL P E+ V DR Sbjct 607 -GSAGRAHLDAFAEVVTDYAETAPT----ATLLSFVDYLNTAAHAEDGLTPGEVQVVPDR 661 Query 660 VQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIP 719 VQVLTVH+AKGLEW+VVAV HL VFP SSWL LP LRGD A +P Sbjct 662 VQVLTVHSAKGLEWEVVAVPHLVAEVFPGKRRSSSWLRTSTALPAHLRGDAAD-----LP 716 Query 720 VLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTK 779 L S DRK++ + + H R DEERRL YVA+TR+E LLVSGH W + T+ Sbjct 717 KLQISEGYDRKEVQEALELHEEGFVAREADEERRLCYVALTRSERALLVSGHWWNESSTR 776 Query 780 PRGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAAR 839 +GPS FL E+ ++++ A P GVV+ WA P + NPL ++ A WP DPL R Sbjct 777 AKGPSIFLTEIAEVMNE---ADPPLGVVDVWAEEPEEGDENPLVADSRTAQWPVDPLGDR 833 Query 840 RGDVERGAALVAAAM----------SADLPGSTTDIDHPP-------------------- 869 R V G L+ A M P D D P Sbjct 834 RSGVATGVELLLAEMAALEEEPEPEPEAEPLPAADDDEIPLPPEPEDDYPPDDEYFEDDE 893 Query 870 ---RPGDAP-WSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCR 925 P D W+ D D LLAERA + LP LSVS LV+L D QRL Sbjct 894 DVIDPEDPDGWAADTDVLLAERARSQSTVDRVALPAQLSVSQLVDLASDADALAQRLRRP 953 Query 926 LPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSW 985 LP P+ A G AFH+W++Q + + L ++ DLPGAAD + ALQ AF S W Sbjct 954 LPLPPNTFARRGTAFHSWLEQRFSGDRLLEIDDLPGAADVGEAPDTDFEALQEAFENSEW 1013 Query 986 AARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQL 1045 A R P AVEVPF I +RGR+DAV+ DPDGG TVVDWKTG P + A+QL Sbjct 1014 ADRVPLAVEVPFSADIEGITLRGRMDAVYADPDGGWTVVDWKTGSVP-SEERLPALAIQL 1072 Query 1046 AVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDEL 1081 YRLAWAAL+ P VR AF+YVR G T+ P +L Sbjct 1073 GAYRLAWAALKKVPVERVRAAFHYVRHGHTLRPADL 1108 >gi|257054747|ref|YP_003132579.1| DNA/RNA helicase, superfamily I [Saccharomonospora viridis DSM 43017] gi|256584619|gb|ACU95752.1| DNA/RNA helicase, superfamily I [Saccharomonospora viridis DSM 43017] Length=1090 Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust. Identities = 565/1120 (51%), Positives = 681/1120 (61%), Gaps = 56/1120 (5%) Query 2 TQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLV 61 T+ AA SPA++A ALGL PT EQAAV+AAPP P +V+AGAGAGKTETMAARVVWLV Sbjct 4 TRQAATRLVSPADIAEALGLPVPTPEQAAVVAAPPEPALVVAGAGAGKTETMAARVVWLV 63 Query 62 ANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIG-LGCGDP--------AACAPVV 112 ANG P +VLGLTFTRKAA QL RVR+RL RLAG G L DP A+ P V Sbjct 64 ANGLVTPDRVLGLTFTRKAARQLADRVRARLRRLAGSGLLDDVDPSGRRRLAVASGEPTV 123 Query 113 STYHAFAGSLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIV 172 TYHA+AG LL +YGL LP++P R+LSET WQLA+ VVS +D L TDK+P VT + Sbjct 124 LTYHAYAGRLLAEYGLRLPVQPGARILSETASWQLAYRVVSSWDADLDTDKAPMTVTEHL 183 Query 173 VRLWGQLGEHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELV 232 + L G+LGEHLV LR+ LV P + QR + P + LL ++A Q R +L+ Sbjct 184 LALAGELGEHLVSPERLREYTTWFCDLVENAPRAKGQRAK-PKKELLDIVAAQRLRLQLL 242 Query 233 PLLDALGERMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRV 292 PL++A R A +DFA QM+ AARLA T P V R RY VLLDEYQDTGHAQRV Sbjct 243 PLVEAYEHRKRAEGALDFADQMSLAARLAETQPDVVASERERYGAVLLDEYQDTGHAQRV 302 Query 293 VLSSLFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSD---GTPAPVLE- 348 +L SLFGG + +TAVGDP Q+IYGWRGASA NLPRFTTDFP D G P P E Sbjct 303 LLRSLFGGPAP--MPVTAVGDPAQAIYGWRGASAANLPRFTTDFPRLDERTGQPVPAREY 360 Query 349 -LLTSWRNPPQALRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIA 407 +LTS+RNPP+ L +AN I+ R + + V+ LR R DA P +R ALLPDV +EREW+A Sbjct 361 GMLTSFRNPPEVLTLANSIAEPLRAKGLGVQELRARADAGPADIRVALLPDVVSEREWVA 420 Query 408 DHLRMRYQRAEADGV-KPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVA 466 D + R+ AE D PTAAVLVRR D A +A LRARG+P EVVGL GLL PEVA Sbjct 421 DQIATRWF-AERDATGTAPTAAVLVRRRVDMAPMAAALRARGLPVEVVGLGGLLDEPEVA 479 Query 467 EVVAMLRLVADPTAGAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMA 526 ++VA LR++A+P +G AA+R+LTG RWRLGA DL ALWRRA LS + + Sbjct 480 DLVATLRVLAEPLSGTAAVRLLTGARWRLGAADLGALWRRAGELSAADDTVVAER----- 534 Query 527 ASADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVL 586 A+ L DAI DPG YS GY RI L+ EL ALR R+ LP+LVA+V R + Sbjct 535 ----AEQAGLVDAIDDPGEPSRYSEEGYARIRRLSRELEALRRRMDQPLPELVADVERTM 590 Query 587 GVDCEVRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVEN 646 +D E A G G HLDAFADVV YAE S A++ + YL A E+ Sbjct 591 LLDVEALARP----GAVGRAHLDAFADVVNDYAE----NSPTATLLSFVDYLAAATRAED 642 Query 647 GLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLL 706 GL P E+ V DRVQVLT H+AKGLEW++VAV HL FP+ SSWL ELP L Sbjct 643 GLEPGEVEVVPDRVQVLTAHSAKGLEWRIVAVPHLVDRTFPNERKTSSWLKTVTELPAAL 702 Query 707 RGDRASAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTL 766 RGD A +P L DRKQ+ + ++EH RR +EERRL YVA+TR+E L Sbjct 703 RGD-----AQDLPQLALRGGEDRKQVEEALAEHEEGFRRRHAEEERRLCYVALTRSEHCL 757 Query 767 LVSGHHWG-PTGTKPRGPSEFLCELKDIIDRSAAAGDP-CGVVEQWASAPAGDERNPLCD 824 +VSG+ WG T+P+ PS FL E+ + + DP GVVE W S P NPL Sbjct 758 VVSGYRWGDANATEPKAPSPFLTEVAERVRE-----DPTVGVVEHWCSEPG---ENPLAG 809 Query 825 NAIEAVWPADPLAARRGDVERGAALVAAAMSADLPG--STTDIDHPPRPGDAPWSTDVDA 882 + E WP DPL ARR V+ GA LV A+ G + TD + W +D D Sbjct 810 VSRETEWPVDPLGARRPAVDEGARLVLEALEELESGADAETDEEITEEDDPDNWVSDTDV 869 Query 883 LLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHA 942 LLAERA A LP LSVS LV+L G+P +RL LP P+ +A G FH Sbjct 870 LLAERARAREPQVEIELPGKLSVSQLVDLAGEPEDLARRLRRPLPFPPNAYARRGTEFHG 929 Query 943 WVQQFYGAELLFDLGDLPG--AADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMP 1000 W+++ + ++ LFDL +LPG AD DP +L AL+ AF S WA R P VEVPF Sbjct 930 WLERRFASDKLFDLDELPGAADADVGDADPADLEALKEAFERSPWAQRVPHDVEVPFSTA 989 Query 1001 IGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPT 1060 I VRGRIDAVF DPDGG TVVDWKTG P M AVQLA YRLAWA L G P Sbjct 990 IDGITVRGRIDAVFADPDGGWTVVDWKTGALPDA-ERMPALAVQLAAYRLAWANLSGAPL 1048 Query 1061 SSVRTAFYYVRSGITVVPDELPAPGELAMLLTDCAGRRSD 1100 VR AF+YVR+ TV P +L L LL R +D Sbjct 1049 EKVRAAFHYVRANRTVRPVDLADADGLRALLRTVPMREND 1088 >gi|254821705|ref|ZP_05226706.1| hypothetical protein MintA_17347 [Mycobacterium intracellulare ATCC 13950] Length=595 Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/590 (73%), Positives = 462/590 (79%), Gaps = 18/590 (3%) Query 520 PESIAMAAS---ADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLP 576 PE+IA AA DAD LADAI+DPG A YS AGY RI AL ELSALR LGH L Sbjct 1 PEAIARAADPSHVDADTVSLADAIADPGPAGSYSAAGYQRITALGAELSALRAHLGHPLA 60 Query 577 DLVAEVRRVLGVDCEVRASAPVSGGWAGPEHLDAFADVVAGYAERASAR------SSEAS 630 DLVAEVRRVLGVDCEVRA+A V+ GWAG EHLDAFADVVAGYAERA S+ AS Sbjct 61 DLVAEVRRVLGVDCEVRAAAGVAAGWAGTEHLDAFADVVAGYAERADGAATRLDASATAS 120 Query 631 VAGLLAYLDVAEVVENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTV 690 V LL +LD AE VENGL PA L VA DRVQVLTVH+AKGLEWQVVAVAHLS G FPST Sbjct 121 VGALLGFLDAAEAVENGLAPAPLAVARDRVQVLTVHSAKGLEWQVVAVAHLSGGTFPSTA 180 Query 691 SRSSWLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDE 750 SRS+WLTD AELPPLLRGDRA+AGA GIPVLDTS V +RKQLSDKISEHRR LD+RRVDE Sbjct 181 SRSTWLTDAAELPPLLRGDRAAAGALGIPVLDTSDVTNRKQLSDKISEHRRQLDQRRVDE 240 Query 751 ERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQW 810 ERRLLYVA+TRAEDTLLVSGHHWG TG KPRGPS+FL E+KD+IDR+A AGDPCG VE W Sbjct 241 ERRLLYVAITRAEDTLLVSGHHWGATGVKPRGPSDFLVEIKDVIDRAAVAGDPCGTVEHW 300 Query 811 ASAPAGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPR 870 A +PA ERNPL DN IEAVWPADPLA RR +VERGA LV A++A D+D Sbjct 301 APSPADGERNPLRDNVIEAVWPADPLAVRREEVERGATLVRRALAAGPGRPCADVDG--- 357 Query 871 PGDAPWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVGARQRLMCRLPKRP 930 W+ DVDALLAERA P R LP LSVSSLV L DP G QRL RLP RP Sbjct 358 -----WAADVDALLAERARLIE-PPVRELPGQLSVSSLVGLARDPAGTAQRLRHRLPSRP 411 Query 931 DPHAWLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPEELAALQRAFTASSWAARTP 990 DPHA LG+AFH+WVQ+FYGAE LFDLGDLPGAAD +VGD ELAALQ AFT S WAAR+P Sbjct 412 DPHALLGNAFHSWVQKFYGAECLFDLGDLPGAADSDVGDSAELAALQAAFTESPWAARSP 471 Query 991 AAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRL 1050 AVEVPFEMPIG+T+VRGRIDAVF DPDGGATVVDWKTG+PPHG A+RQAAVQLAVYR+ Sbjct 472 VAVEVPFEMPIGETLVRGRIDAVFADPDGGATVVDWKTGEPPHGAEALRQAAVQLAVYRM 531 Query 1051 AWAALRGCPTSSVRTAFYYVRSGITVVPDELPAPGELAMLLTDCAGRRSD 1100 AWAAL G SSVRTAFYYVR+G TVVPDELP+ ELA LL D G R D Sbjct 532 AWAALAGVAESSVRTAFYYVRAGTTVVPDELPSAAELAGLLIDPDGTRCD 581 Lambda K H 0.319 0.134 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2774192251500 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40