BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3204
Length=101
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610340|ref|NP_217720.1| DNA-methyltransferase (modification... 200 7e-50
gi|15842791|ref|NP_337828.1| 6-O-methylguanine DNA methyltransfe... 198 3e-49
gi|183981377|ref|YP_001849668.1| DNA-methyltransferase (modifica... 172 1e-41
gi|342861161|ref|ZP_08717810.1| DNA-methyltransferase (modificat... 172 2e-41
gi|254821584|ref|ZP_05226585.1| DNA-methyltransferase (modificat... 172 2e-41
gi|118618007|ref|YP_906339.1| DNA-methyltransferase (modificatio... 171 3e-41
gi|240172131|ref|ZP_04750790.1| DNA-methyltransferase (modificat... 169 1e-40
gi|296169023|ref|ZP_06850686.1| DNA-methyltransferase (modificat... 166 7e-40
gi|254776590|ref|ZP_05218106.1| 6-O-methylguanine DNA methyltran... 160 6e-38
gi|41409402|ref|NP_962238.1| hypothetical protein MAP3304 [Mycob... 159 2e-37
gi|118463839|ref|YP_883299.1| 6-O-methylguanine DNA methyltransf... 159 2e-37
gi|108798372|ref|YP_638569.1| methylated-DNA-(protein)-cysteine ... 156 8e-37
gi|126434056|ref|YP_001069747.1| methylated-DNA-(protein)-cystei... 154 3e-36
gi|169630599|ref|YP_001704248.1| DNA-methyltransferase [Mycobact... 153 6e-36
gi|120402798|ref|YP_952627.1| methylated-DNA-(protein)-cysteine ... 153 9e-36
gi|118472816|ref|YP_886305.1| 6-O-methylguanine DNA methyltransf... 150 4e-35
gi|315445543|ref|YP_004078422.1| methylated DNA-protein cysteine... 146 9e-34
gi|145225246|ref|YP_001135924.1| methylated-DNA-(protein)-cystei... 145 2e-33
gi|343927592|ref|ZP_08767060.1| hypothetical protein GOALK_097_0... 139 1e-31
gi|262203381|ref|YP_003274589.1| methylated-DNA-(protein)-cystei... 138 3e-31
gi|333991559|ref|YP_004524173.1| DNA-methyltransferase [Mycobact... 138 3e-31
gi|296138857|ref|YP_003646100.1| methylated-DNA-(protein)-cystei... 132 1e-29
gi|226365844|ref|YP_002783627.1| hypothetical protein ROP_64350 ... 131 3e-29
gi|312140620|ref|YP_004007956.1| 6-o-methylguanine DNA methyltra... 131 4e-29
gi|296394981|ref|YP_003659865.1| methylated-DNA-(protein)-cystei... 130 5e-29
gi|317508879|ref|ZP_07966518.1| 6-O-methylguanine DNA methyltran... 128 2e-28
gi|111023336|ref|YP_706308.1| hypothetical protein RHA1_ro06373 ... 127 6e-28
gi|229490985|ref|ZP_04384818.1| possible DNA-methyltransferase [... 125 2e-27
gi|54026514|ref|YP_120756.1| hypothetical protein nfa45410 [Noca... 121 3e-26
gi|326383307|ref|ZP_08204995.1| 6-O-methylguanine DNA methyltran... 120 5e-26
gi|226305703|ref|YP_002765663.1| hypothetical protein RER_22160 ... 120 7e-26
gi|134097671|ref|YP_001103332.1| DNA-methyltransferase (modifica... 108 4e-22
gi|333921411|ref|YP_004494992.1| methylated-DNA-(protein)-cystei... 107 6e-22
gi|331694959|ref|YP_004331198.1| methylated-DNA-(protein)-cystei... 100 7e-20
gi|302524413|ref|ZP_07276755.1| DNA-methyltransferase [Streptomy... 99.8 1e-19
gi|300783058|ref|YP_003763349.1| DNA-methyltransferase [Amycolat... 99.0 2e-19
gi|257054745|ref|YP_003132577.1| putative methylated DNA-protein... 98.2 4e-19
gi|324999415|ref|ZP_08120527.1| predicted methylated DNA-protein... 92.8 2e-17
gi|256375000|ref|YP_003098660.1| methylated-DNA-(protein)-cystei... 92.4 2e-17
gi|284033231|ref|YP_003383162.1| methylated-DNA-(protein)-cystei... 89.4 2e-16
gi|258652353|ref|YP_003201509.1| methylated-DNA-(protein)-cystei... 88.6 3e-16
gi|336118835|ref|YP_004573607.1| hypothetical protein MLP_31900 ... 79.0 2e-13
gi|296270935|ref|YP_003653567.1| methylated-DNA-(protein)-cystei... 70.9 5e-11
gi|92112647|ref|YP_572575.1| methylated-DNA-(protein)-cysteine S... 69.3 2e-10
gi|152965137|ref|YP_001360921.1| DNA binding methylated-DNA-(pro... 68.9 2e-10
gi|50085904|ref|YP_047414.1| methyltransferase [Acinetobacter sp... 68.2 4e-10
gi|257067679|ref|YP_003153934.1| putative methylated DNA-protein... 65.5 2e-09
gi|325970570|ref|YP_004246761.1| methylated-DNA/protein-cysteine... 65.1 3e-09
gi|284992624|ref|YP_003411178.1| methylated-DNA-(protein)-cystei... 65.1 4e-09
gi|338996720|ref|ZP_08635430.1| methylated-DNA-(protein)-cystein... 64.7 4e-09
>gi|15610340|ref|NP_217720.1| DNA-methyltransferase (modification methylase) [Mycobacterium
tuberculosis H37Rv]
gi|148663064|ref|YP_001284587.1| putative 6-O-methylguanine DNA methyltransferase [Mycobacterium
tuberculosis H37Ra]
gi|167968320|ref|ZP_02550597.1| putative 6-O-methylguanine DNA methyltransferase [Mycobacterium
tuberculosis H37Ra]
gi|307085959|ref|ZP_07495072.1| DNA-methyltransferase [Mycobacterium tuberculosis SUMu012]
gi|2072681|emb|CAB08312.1| POSSIBLE DNA-METHYLTRANSFERASE (MODIFICATION METHYLASE) [Mycobacterium
tuberculosis H37Rv]
gi|148507216|gb|ABQ75025.1| putative 6-O-methylguanine DNA methyltransferase [Mycobacterium
tuberculosis H37Ra]
gi|308364535|gb|EFP53386.1| DNA-methyltransferase [Mycobacterium tuberculosis SUMu012]
Length=101
Score = 200 bits (508), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/101 (100%), Positives = 101/101 (100%), Gaps = 0/101 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR
Sbjct 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFPPG 101
ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFPPG
Sbjct 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFPPG 101
>gi|15842791|ref|NP_337828.1| 6-O-methylguanine DNA methyltransferase, putative [Mycobacterium
tuberculosis CDC1551]
gi|31794381|ref|NP_856874.1| DNA-methyltransferase (modification methylase) [Mycobacterium
bovis AF2122/97]
gi|121639090|ref|YP_979314.1| putative DNA-methyltransferase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
73 more sequence titles
Length=101
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/101 (99%), Positives = 100/101 (99%), Gaps = 0/101 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAAL GLSSPRIVGWIMRTDSSDLPWHRVIR
Sbjct 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALAGLSSPRIVGWIMRTDSSDLPWHRVIR 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFPPG 101
ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFPPG
Sbjct 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFPPG 101
>gi|183981377|ref|YP_001849668.1| DNA-methyltransferase (modification methylase) [Mycobacterium
marinum M]
gi|183174703|gb|ACC39813.1| DNA-methyltransferase (modification methylase) [Mycobacterium
marinum M]
Length=102
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/101 (84%), Positives = 91/101 (91%), Gaps = 0/101 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MAPVTDEQVE VR LVAAIP GRV+TYGDIA+ GLSSPRIVGWIMRTDS DLPWHRVI
Sbjct 1 MAPVTDEQVERVRRLVAAIPSGRVATYGDIASAAGLSSPRIVGWIMRTDSVDLPWHRVIT 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFPPG 101
ASGRPA+HL RQLELLRAEGVLSVDG++AL ++RYEFPPG
Sbjct 61 ASGRPARHLTNRQLELLRAEGVLSVDGKIALDQVRYEFPPG 101
>gi|342861161|ref|ZP_08717810.1| DNA-methyltransferase (modification methylase) [Mycobacterium
colombiense CECT 3035]
gi|342131605|gb|EGT84875.1| DNA-methyltransferase (modification methylase) [Mycobacterium
colombiense CECT 3035]
Length=102
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/101 (84%), Positives = 93/101 (93%), Gaps = 0/101 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MAPVTDEQVE VR+LVAAIP GRV+TYGDIA++ GLSSPRIVGWIMRTDSSDLPWHRVI
Sbjct 1 MAPVTDEQVERVRALVAAIPSGRVATYGDIASVAGLSSPRIVGWIMRTDSSDLPWHRVIT 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFPPG 101
ASGRPA+HL TRQLELLRAEGVL+ DGR+AL E+R+EFP G
Sbjct 61 ASGRPARHLTTRQLELLRAEGVLATDGRIALREVRHEFPDG 101
>gi|254821584|ref|ZP_05226585.1| DNA-methyltransferase (modification methylase) [Mycobacterium
intracellulare ATCC 13950]
Length=102
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/101 (84%), Positives = 93/101 (93%), Gaps = 0/101 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MAPVTD+QVE VR+LVAAIP GRV+TYGDIA++ GLSSPRIVGWIMRTDSSDLPWHRVI
Sbjct 1 MAPVTDDQVERVRALVAAIPSGRVATYGDIASVAGLSSPRIVGWIMRTDSSDLPWHRVIT 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFPPG 101
ASGRPA+HL TRQLELLRAEGVL+ DGR+AL E+RYEFP G
Sbjct 61 ASGRPARHLTTRQLELLRAEGVLARDGRIALGEVRYEFPDG 101
>gi|118618007|ref|YP_906339.1| DNA-methyltransferase (modification methylase) [Mycobacterium
ulcerans Agy99]
gi|118570117|gb|ABL04868.1| DNA-methyltransferase (modification methylase) [Mycobacterium
ulcerans Agy99]
Length=102
Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/101 (83%), Positives = 91/101 (91%), Gaps = 0/101 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MAPVTDEQVE VR LVAAIP GRV+TYGDIA+ GLSSPRI GWIMRTDS DLPWHRVI
Sbjct 1 MAPVTDEQVERVRRLVAAIPSGRVATYGDIASAAGLSSPRIAGWIMRTDSVDLPWHRVIT 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFPPG 101
ASGRPA+HL +RQLELLRAEGVLSVDG++AL ++RYEFPPG
Sbjct 61 ASGRPARHLTSRQLELLRAEGVLSVDGKIALDQVRYEFPPG 101
>gi|240172131|ref|ZP_04750790.1| DNA-methyltransferase (modification methylase) [Mycobacterium
kansasii ATCC 12478]
Length=105
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/101 (82%), Positives = 91/101 (91%), Gaps = 0/101 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MAPVTDEQ+E VR+LVAAIP GRV+TYGDIA++ GLSSPRIVGWIMRTDS+DLPWHRVI
Sbjct 1 MAPVTDEQIERVRALVAAIPPGRVATYGDIASVAGLSSPRIVGWIMRTDSADLPWHRVIT 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFPPG 101
ASGRPA+HL RQLELLRAEGVLS DGRV L ++RY FPPG
Sbjct 61 ASGRPARHLTRRQLELLRAEGVLSTDGRVTLGQVRYAFPPG 101
>gi|296169023|ref|ZP_06850686.1| DNA-methyltransferase (modification methylase) [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295896305|gb|EFG75963.1| DNA-methyltransferase (modification methylase) [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=98
Score = 166 bits (421), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/98 (82%), Positives = 90/98 (92%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MAPVTD+QVE VR+LVAAIP GRV+TYGDIAA+ GLSSPRIVGWIMRTDSSDLPWHRVI
Sbjct 1 MAPVTDDQVERVRALVAAIPAGRVATYGDIAAVAGLSSPRIVGWIMRTDSSDLPWHRVIT 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPA+HL TRQLELLRAEGVL+ DG++AL +RY+F
Sbjct 61 ASGRPARHLTTRQLELLRAEGVLATDGKIALGAVRYDF 98
>gi|254776590|ref|ZP_05218106.1| 6-O-methylguanine DNA methyltransferase [Mycobacterium avium
subsp. avium ATCC 25291]
Length=100
Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/98 (82%), Positives = 88/98 (90%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MAPVTDEQVE VR+LVAAIP GRV+TYGDIAA+ GLSS RIVGWIMRTDSSDLPWHRVI
Sbjct 1 MAPVTDEQVERVRALVAAIPPGRVATYGDIAAVAGLSSARIVGWIMRTDSSDLPWHRVIT 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPA+HL TRQLELLRAEGVL+ DGR+ L E+R+ F
Sbjct 61 ASGRPARHLRTRQLELLRAEGVLATDGRIPLPEVRHRF 98
>gi|41409402|ref|NP_962238.1| hypothetical protein MAP3304 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398233|gb|AAS05854.1| hypothetical protein MAP_3304 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459528|gb|EGO38465.1| putative methylated DNA-protein cysteine methyltransferase [Mycobacterium
avium subsp. paratuberculosis S397]
Length=100
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/98 (81%), Positives = 87/98 (89%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MAPVTDEQVE VR+LVAAIP GRV+TYGDIAA+ GLSS RIVGWIMRTDSSDLPWHRVI
Sbjct 1 MAPVTDEQVERVRALVAAIPPGRVATYGDIAAVAGLSSARIVGWIMRTDSSDLPWHRVIT 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPA+HL TRQLELLR EGVL+ DGR+ L E+R+ F
Sbjct 61 ASGRPARHLRTRQLELLRTEGVLATDGRIPLPEVRHRF 98
>gi|118463839|ref|YP_883299.1| 6-O-methylguanine DNA methyltransferase [Mycobacterium avium
104]
gi|118165126|gb|ABK66023.1| 6-O-methylguanine DNA methyltransferase, DNA binding domain subfamily
protein [Mycobacterium avium 104]
Length=100
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/98 (81%), Positives = 88/98 (90%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MAPVTDEQVE VR+LVAAIP GRV+TYGDIAA+ GLSS RIVGWIMRTDSSDLPWHRVI
Sbjct 1 MAPVTDEQVERVRALVAAIPPGRVATYGDIAAVAGLSSARIVGWIMRTDSSDLPWHRVIT 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPA+HL TRQLELLRAEGVL+ +GR+ L E+R+ F
Sbjct 61 ASGRPARHLRTRQLELLRAEGVLATEGRIPLPEVRHRF 98
>gi|108798372|ref|YP_638569.1| methylated-DNA-(protein)-cysteine S-methyltransferase [Mycobacterium
sp. MCS]
gi|119867469|ref|YP_937421.1| methylated-DNA-(protein)-cysteine S-methyltransferase [Mycobacterium
sp. KMS]
gi|108768791|gb|ABG07513.1| O(6)-alkylguanine repair protein YbaZ [Mycobacterium sp. MCS]
gi|119693558|gb|ABL90631.1| O(6)-alkylguanine repair protein YbaZ [Mycobacterium sp. KMS]
Length=99
Score = 156 bits (395), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/98 (81%), Positives = 86/98 (88%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA +TDEQVE VR+LVA IP GRV+TYGDIA GLSSPRIVGWIMRTDSSDLPWHRVI
Sbjct 1 MAAITDEQVEAVRALVAQIPPGRVATYGDIADAAGLSSPRIVGWIMRTDSSDLPWHRVIG 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPA HLATRQLELLRAEGVL+VDGRV L ++R+ F
Sbjct 61 ASGRPAPHLATRQLELLRAEGVLAVDGRVPLRDVRHTF 98
>gi|126434056|ref|YP_001069747.1| methylated-DNA-(protein)-cysteine S-methyltransferase [Mycobacterium
sp. JLS]
gi|126233856|gb|ABN97256.1| O(6)-alkylguanine repair protein YbaZ [Mycobacterium sp. JLS]
Length=99
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/98 (80%), Positives = 85/98 (87%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA +TDEQVE VR+LVA IP RV+TYGDIA GLSSPRIVGWIMRTDSSDLPWHRVI
Sbjct 1 MAAITDEQVEAVRALVAQIPPARVATYGDIADAAGLSSPRIVGWIMRTDSSDLPWHRVIG 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPA HLATRQLELLRAEGVL+VDGRV L ++R+ F
Sbjct 61 ASGRPAPHLATRQLELLRAEGVLAVDGRVPLRDVRHTF 98
>gi|169630599|ref|YP_001704248.1| DNA-methyltransferase [Mycobacterium abscessus ATCC 19977]
gi|169242566|emb|CAM63594.1| Possible DNA-methyltransferase [Mycobacterium abscessus]
Length=98
Score = 153 bits (387), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/98 (78%), Positives = 87/98 (89%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA VT+EQVELVRSLVA+IP GRV+TYGDIA GL+S RIVGWIMRTDS+DLPWHRVI
Sbjct 1 MAAVTEEQVELVRSLVASIPAGRVATYGDIADAAGLASARIVGWIMRTDSADLPWHRVIG 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPA H+ TRQLELLRAEGVL+VDGR+AL ++R+ F
Sbjct 61 ASGRPAPHIRTRQLELLRAEGVLAVDGRIALRDVRHGF 98
>gi|120402798|ref|YP_952627.1| methylated-DNA-(protein)-cysteine S-methyltransferase [Mycobacterium
vanbaalenii PYR-1]
gi|119955616|gb|ABM12621.1| O(6)-alkylguanine repair protein YbaZ [Mycobacterium vanbaalenii
PYR-1]
Length=98
Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/98 (80%), Positives = 84/98 (86%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA VT+EQVE VR LVA++P GRV+TYGDIA GLSSPRIVGWIMRTDSSDLPWHRVI
Sbjct 1 MAAVTEEQVETVRGLVASVPPGRVTTYGDIADAAGLSSPRIVGWIMRTDSSDLPWHRVIA 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPA HLATRQLE LRAEGVL+VDGRV L E R+ F
Sbjct 61 ASGRPAVHLATRQLERLRAEGVLAVDGRVPLREYRHTF 98
>gi|118472816|ref|YP_886305.1| 6-O-methylguanine DNA methyltransferase [Mycobacterium smegmatis
str. MC2 155]
gi|118174103|gb|ABK74999.1| 6-O-methylguanine DNA methyltransferase, DNA binding domain subfamily
protein [Mycobacterium smegmatis str. MC2 155]
Length=98
Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/98 (80%), Positives = 84/98 (86%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA VT+EQVE VR+LVAAIP G VSTYGDIA + GLSSPRIVGWIMRTDSSDLPWHRV+
Sbjct 1 MARVTEEQVEAVRALVAAIPPGTVSTYGDIAEVAGLSSPRIVGWIMRTDSSDLPWHRVVP 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPA HLATRQLE LRAEGVL+ DGRV L E R+ F
Sbjct 61 ASGRPAPHLATRQLERLRAEGVLATDGRVPLREYRHIF 98
>gi|315445543|ref|YP_004078422.1| methylated DNA-protein cysteine methyltransferase [Mycobacterium
sp. Spyr1]
gi|315263846|gb|ADU00588.1| predicted methylated DNA-protein cysteine methyltransferase [Mycobacterium
sp. Spyr1]
Length=98
Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/98 (75%), Positives = 83/98 (85%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA +TD+QVE+VR+LVAAIP GRV+TYGDIA GLSSPRIV WIMRTDS+DLPWHRVI
Sbjct 1 MAAITDDQVEVVRALVAAIPAGRVATYGDIAGAAGLSSPRIVAWIMRTDSADLPWHRVIP 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
SGRPA HLA RQL+ LRAEGVL+ DGRV L+E R+ F
Sbjct 61 VSGRPAPHLAGRQLDRLRAEGVLARDGRVPLAEYRHTF 98
>gi|145225246|ref|YP_001135924.1| methylated-DNA-(protein)-cysteine S-methyltransferase [Mycobacterium
gilvum PYR-GCK]
gi|145217732|gb|ABP47136.1| O(6)-alkylguanine repair protein YbaZ [Mycobacterium gilvum PYR-GCK]
Length=98
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/98 (74%), Positives = 82/98 (84%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA +TD+QVE VR+LVAAIP GRV+TYGDIA GLSSPRIV WIMRTDS+DLPWHRVI
Sbjct 1 MAAITDDQVEAVRALVAAIPAGRVATYGDIAGAAGLSSPRIVAWIMRTDSADLPWHRVIP 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
SGRPA HLA RQL+ LRAEGVL+ DGRV L++ R+ F
Sbjct 61 VSGRPAPHLAGRQLDRLRAEGVLARDGRVPLTQYRHAF 98
>gi|343927592|ref|ZP_08767060.1| hypothetical protein GOALK_097_00120 [Gordonia alkanivorans NBRC
16433]
gi|343762233|dbj|GAA13986.1| hypothetical protein GOALK_097_00120 [Gordonia alkanivorans NBRC
16433]
Length=99
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/99 (70%), Positives = 80/99 (81%), Gaps = 0/99 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA +T+EQVE VR+LVA IP+G+VSTYGD+A GLSSPRIVGWIMRTD++DLPWHRV+
Sbjct 1 MAAITEEQVEAVRALVAEIPVGQVSTYGDLAGAAGLSSPRIVGWIMRTDTADLPWHRVVP 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFP 99
ASGRPA HLA RQLE L AEGV V GR+ L E R+ P
Sbjct 61 ASGRPAPHLANRQLERLAAEGVPIVGGRIRLRECRWAIP 99
>gi|262203381|ref|YP_003274589.1| methylated-DNA-(protein)-cysteine S- methyltransferase DNA-binding
protein [Gordonia bronchialis DSM 43247]
gi|262086728|gb|ACY22696.1| Methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
protein [Gordonia bronchialis DSM 43247]
Length=102
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/99 (70%), Positives = 80/99 (81%), Gaps = 0/99 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
M V+D+ VE VRSLVAAIPLG+VSTYGD+AA GLSSPRIVGWIMRTD++DLPWHRV+
Sbjct 1 MPAVSDDDVESVRSLVAAIPLGQVSTYGDLAAAAGLSSPRIVGWIMRTDTADLPWHRVVP 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFP 99
ASGRPA HLA RQL+ LR EGV D R+ L E R++ P
Sbjct 61 ASGRPAPHLARRQLDRLRTEGVPITDDRIRLRECRWDIP 99
>gi|333991559|ref|YP_004524173.1| DNA-methyltransferase [Mycobacterium sp. JDM601]
gi|333487527|gb|AEF36919.1| DNA-methyltransferase (modification methylase) [Mycobacterium
sp. JDM601]
Length=98
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/98 (71%), Positives = 77/98 (79%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA VTDEQVE VR+L+ IP GRV+TYGDIA+ GLSSPRIVGWI+R D +DLPWHRVIR
Sbjct 1 MATVTDEQVERVRALILGIPAGRVATYGDIASAAGLSSPRIVGWILRVDGADLPWHRVIR 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPA L T QL LRAEGV +VDGRV L R+ F
Sbjct 61 ASGRPATQLRTEQLARLRAEGVTAVDGRVDLRAARHRF 98
>gi|296138857|ref|YP_003646100.1| methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
protein [Tsukamurella paurometabola DSM 20162]
gi|296026991|gb|ADG77761.1| Methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
protein [Tsukamurella paurometabola DSM 20162]
Length=96
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/95 (71%), Positives = 78/95 (83%), Gaps = 0/95 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA VT+EQVE VR +A+IP GRV TYGDIA GLSSPRIVGW+MRTD+SDLPW+RV+
Sbjct 1 MAKVTEEQVEAVRERIASIPPGRVRTYGDIADEVGLSSPRIVGWVMRTDASDLPWYRVVP 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIR 95
ASGRPA H+ATRQLELLRAEGVL+ R+ L + R
Sbjct 61 ASGRPAPHIATRQLELLRAEGVLADGDRIPLRDYR 95
>gi|226365844|ref|YP_002783627.1| hypothetical protein ROP_64350 [Rhodococcus opacus B4]
gi|226244334|dbj|BAH54682.1| hypothetical protein [Rhodococcus opacus B4]
Length=102
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/102 (68%), Positives = 78/102 (77%), Gaps = 1/102 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
M T+EQVE VR+LVA+IP GRV+TYGDIAA GLSS R VGWIMRTDS+DLPWHRV+
Sbjct 1 MVATTEEQVEAVRALVASIPPGRVATYGDIAAAAGLSSARTVGWIMRTDSADLPWHRVLG 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF-PPG 101
ASGRPA HLA +Q+ L EGV DGRV L+ RY F PPG
Sbjct 61 ASGRPAPHLAHKQIAKLELEGVPIRDGRVNLAAARYLFDPPG 102
>gi|312140620|ref|YP_004007956.1| 6-o-methylguanine DNA methyltransferase [Rhodococcus equi 103S]
gi|325675753|ref|ZP_08155437.1| DNA-methyltransferase [Rhodococcus equi ATCC 33707]
gi|311889959|emb|CBH49276.1| 6-O-methylguanine DNA methyltransferase [Rhodococcus equi 103S]
gi|325553724|gb|EGD23402.1| DNA-methyltransferase [Rhodococcus equi ATCC 33707]
Length=98
Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/98 (69%), Positives = 76/98 (78%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA T+EQ+E VR LVA+IPLGRV+TYGDIA+ GLSS R VGWIMRTDS+DLPWHRV+
Sbjct 1 MAATTEEQIERVRDLVASIPLGRVATYGDIASAAGLSSARTVGWIMRTDSADLPWHRVLG 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPA HLA RQL L EGV DGRV L+ R+ F
Sbjct 61 ASGRPAAHLARRQLAKLELEGVPIRDGRVDLAVARHRF 98
>gi|296394981|ref|YP_003659865.1| methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
protein [Segniliparus rotundus DSM 44985]
gi|296182128|gb|ADG99034.1| Methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
protein [Segniliparus rotundus DSM 44985]
Length=262
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/98 (65%), Positives = 77/98 (79%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
M VTDEQ E VR+LVA+IP G+V+TYGDIA GL++PR VGWI+R DS+DLPWHRV+
Sbjct 1 MPAVTDEQFERVRALVASIPEGKVATYGDIAKAVGLTNPRQVGWILREDSADLPWHRVVG 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPAQHL QL LR+EGVL+ GR++L E R+ F
Sbjct 61 ASGRPAQHLTAEQLARLRSEGVLASGGRISLRERRHVF 98
>gi|317508879|ref|ZP_07966518.1| 6-O-methylguanine DNA methyltransferase [Segniliparus rugosus
ATCC BAA-974]
gi|316252840|gb|EFV12271.1| 6-O-methylguanine DNA methyltransferase [Segniliparus rugosus
ATCC BAA-974]
Length=99
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/98 (66%), Positives = 75/98 (77%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
M +TD E VR LVA+IP GRV+TYGDIA GL++ R VGWIMR DS+DLPWHRVI
Sbjct 1 MPQLTDADFERVRELVASIPEGRVATYGDIAKAAGLTNARHVGWIMREDSADLPWHRVIG 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
+SGRPAQH+A QL LRAEG+LSVDG+V L E R+ F
Sbjct 61 SSGRPAQHIAAEQLARLRAEGILSVDGKVPLRERRHVF 98
>gi|111023336|ref|YP_706308.1| hypothetical protein RHA1_ro06373 [Rhodococcus jostii RHA1]
gi|110822866|gb|ABG98150.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=102
Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/98 (67%), Positives = 75/98 (77%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
M T+EQVE VR+LVA+IP GRV+TYGDIA+ GLSS R VGWIMRTDS+DLPWHRV+
Sbjct 1 MVATTEEQVEAVRALVASIPPGRVATYGDIASAAGLSSARTVGWIMRTDSADLPWHRVLG 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASGRPA HLA RQ+ L EGV DGRV L+ R+ F
Sbjct 61 ASGRPAPHLAHRQIAKLELEGVPIRDGRVDLAAARHRF 98
>gi|229490985|ref|ZP_04384818.1| possible DNA-methyltransferase [Rhodococcus erythropolis SK121]
gi|229322101|gb|EEN87889.1| possible DNA-methyltransferase [Rhodococcus erythropolis SK121]
Length=98
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/98 (63%), Positives = 73/98 (75%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA T+EQ+E VR L+A+IP G V+TYGDIA GLSS R VGWIMRTDS+DLPWHRV+
Sbjct 1 MAATTEEQIEEVRRLIASIPAGFVATYGDIADAAGLSSARTVGWIMRTDSADLPWHRVLG 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASG+P+ HLA RQ+ L EGV DGR+ L + RY F
Sbjct 61 ASGKPSAHLAHRQIAKLELEGVPIKDGRIDLKKARYHF 98
>gi|54026514|ref|YP_120756.1| hypothetical protein nfa45410 [Nocardia farcinica IFM 10152]
gi|54018022|dbj|BAD59392.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=98
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/94 (64%), Positives = 72/94 (77%), Gaps = 0/94 (0%)
Query 3 PVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIRAS 62
P ++ Q+E VR LVA++P GRV TYGD+AA GLS+PR VGWIMRTD++DLPWHRV+ A
Sbjct 2 PTSEAQIERVRELVASVPPGRVVTYGDLAAAAGLSTPRTVGWIMRTDAADLPWHRVVGAG 61
Query 63 GRPAQHLATRQLELLRAEGVLSVDGRVALSEIRY 96
G+PA HLA RQL LL AEGV DGRV L R+
Sbjct 62 GKPAAHLAHRQLGLLVAEGVPVRDGRVDLRAARF 95
>gi|326383307|ref|ZP_08204995.1| 6-O-methylguanine DNA methyltransferase [Gordonia neofelifaecis
NRRL B-59395]
gi|326198057|gb|EGD55243.1| 6-O-methylguanine DNA methyltransferase [Gordonia neofelifaecis
NRRL B-59395]
Length=110
Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/95 (69%), Positives = 72/95 (76%), Gaps = 0/95 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA VT+EQVE VR+LVAAIP VSTYGD+AA GL SPRIVGWIMRTDS+DLPWHRV+
Sbjct 12 MAAVTEEQVEAVRALVAAIPPRAVSTYGDLAAAAGLPSPRIVGWIMRTDSADLPWHRVVP 71
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIR 95
ASGRPA L RQL LR EGV VD R+ + R
Sbjct 72 ASGRPAPGLRARQLARLREEGVRIVDDRIDMRAHR 106
>gi|226305703|ref|YP_002765663.1| hypothetical protein RER_22160 [Rhodococcus erythropolis PR4]
gi|226184820|dbj|BAH32924.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=98
Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/98 (60%), Positives = 72/98 (74%), Gaps = 0/98 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
MA T+EQ+E VR L+A+IP G V+TYGDIA GLSS R VGWIMRTDS+DLPWHRV+
Sbjct 1 MAATTEEQIEEVRRLIASIPAGFVATYGDIADAAGLSSARTVGWIMRTDSADLPWHRVLG 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
ASG+P+ HLA Q+ L EGV +GR+ L + R+ F
Sbjct 61 ASGKPSAHLAHSQIAKLELEGVPIKEGRIDLKKARFHF 98
>gi|134097671|ref|YP_001103332.1| DNA-methyltransferase (modification methylase) [Saccharopolyspora
erythraea NRRL 2338]
gi|291006370|ref|ZP_06564343.1| DNA-methyltransferase (modification methylase) [Saccharopolyspora
erythraea NRRL 2338]
gi|133910294|emb|CAM00407.1| possible DNA-methyltransferase (modification methylase) [Saccharopolyspora
erythraea NRRL 2338]
Length=95
Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/93 (59%), Positives = 72/93 (78%), Gaps = 0/93 (0%)
Query 4 VTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIRASG 63
+ +E +E VRS+VAAIP G+V +YGD+A L GL S R+VG IM DS+DLPWHRV+RA+G
Sbjct 1 MDEETLEQVRSVVAAIPPGKVLSYGDVAELAGLRSARLVGRIMAEDSADLPWHRVLRANG 60
Query 64 RPAQHLATRQLELLRAEGVLSVDGRVALSEIRY 96
A+HL +RQLELLRAEGVL+ R+ + + R+
Sbjct 61 TVAEHLRSRQLELLRAEGVLADGARIDMRQYRW 93
>gi|333921411|ref|YP_004494992.1| methylated-DNA-(protein)-cysteine S-methyltransferase [Amycolicicoccus
subflavus DQS3-9A1]
gi|333483632|gb|AEF42192.1| Methylated-DNA-(Protein)-cysteine S-methyltransferase [Amycolicicoccus
subflavus DQS3-9A1]
Length=101
Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/99 (56%), Positives = 70/99 (71%), Gaps = 1/99 (1%)
Query 1 MAP-VTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVI 59
M P ++DE VE VR LV+ I G V+TYGDIA GL S RIVGWI++TD +D+PWHRV+
Sbjct 1 MTPAISDETVEHVRELVSGIAPGCVATYGDIATAAGLPSARIVGWILKTDGADIPWHRVV 60
Query 60 RASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYEF 98
RA G HLA +Q LL +EGV VDGRV ++ R++F
Sbjct 61 RADGILPGHLADKQAGLLTSEGVHIVDGRVRVATYRHDF 99
>gi|331694959|ref|YP_004331198.1| methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding
protein [Pseudonocardia dioxanivorans CB1190]
gi|326949648|gb|AEA23345.1| Methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding
protein [Pseudonocardia dioxanivorans CB1190]
Length=93
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/86 (61%), Positives = 62/86 (73%), Gaps = 0/86 (0%)
Query 4 VTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIRASG 63
+ D VE VR+ V AIP G+ STYG+IAA GLS+PRIVG I+ D D+PWHRV+RA G
Sbjct 1 MDDATVEAVRAAVRAIPPGQTSTYGEIAAQLGLSTPRIVGRILAEDGHDIPWHRVLRADG 60
Query 64 RPAQHLATRQLELLRAEGVLSVDGRV 89
PA H+A Q LRAEGVL VDGR+
Sbjct 61 TPAPHIAVEQAARLRAEGVLLVDGRL 86
>gi|302524413|ref|ZP_07276755.1| DNA-methyltransferase [Streptomyces sp. AA4]
gi|302433308|gb|EFL05124.1| DNA-methyltransferase [Streptomyces sp. AA4]
Length=109
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/93 (52%), Positives = 66/93 (71%), Gaps = 0/93 (0%)
Query 4 VTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIRASG 63
+ DE E +R+++A +P G V+TYGD+AAL+G SPR+VG + D DLPWHR++RA+G
Sbjct 1 MNDELHERIRAVIADVPAGTVATYGDVAALSGAPSPRMVGRALAEDGHDLPWHRILRANG 60
Query 64 RPAQHLATRQLELLRAEGVLSVDGRVALSEIRY 96
PA HL QLE LRAEGVL+ +V L + R+
Sbjct 61 TPAPHLLHEQLERLRAEGVLADGDKVDLRKYRW 93
>gi|300783058|ref|YP_003763349.1| DNA-methyltransferase [Amycolatopsis mediterranei U32]
gi|299792572|gb|ADJ42947.1| DNA-methyltransferase [Amycolatopsis mediterranei U32]
gi|340524437|gb|AEK39642.1| DNA-methyltransferase [Amycolatopsis mediterranei S699]
Length=109
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/97 (53%), Positives = 66/97 (69%), Gaps = 0/97 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
M + D E VR ++ ++P G V+TYGDIAAL G SPR+VG I+ D DLPWHR++R
Sbjct 1 MFGMDDVLHERVREIIESVPAGTVATYGDIAALAGAPSPRMVGAILAEDGHDLPWHRILR 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRYE 97
A+G PA HL QLE LRAEGVL+ RV L + R++
Sbjct 61 ANGTPAPHLVHDQLERLRAEGVLADGQRVDLRKYRWK 97
>gi|257054745|ref|YP_003132577.1| putative methylated DNA-protein cysteine methyltransferase [Saccharomonospora
viridis DSM 43017]
gi|256584617|gb|ACU95750.1| predicted methylated DNA-protein cysteine methyltransferase [Saccharomonospora
viridis DSM 43017]
Length=96
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/95 (53%), Positives = 66/95 (70%), Gaps = 1/95 (1%)
Query 6 DEQV-ELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIRASGR 64
DE++ E +R +VA++P G V+TYGD+A + G S+PR+VG ++ D DLPWHRV+RA G
Sbjct 2 DEELHERIRDVVASVPKGTVATYGDVAKIAGASTPRLVGRVLAEDGHDLPWHRVLRADGT 61
Query 65 PAQHLATRQLELLRAEGVLSVDGRVALSEIRYEFP 99
PA HLA QL LRAEGVL+ RV L R+ P
Sbjct 62 PAPHLAREQLARLRAEGVLAEGRRVDLRRYRWRAP 96
>gi|324999415|ref|ZP_08120527.1| predicted methylated DNA-protein cysteine methyltransferase [Pseudonocardia
sp. P1]
Length=93
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/86 (54%), Positives = 60/86 (70%), Gaps = 0/86 (0%)
Query 4 VTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIRASG 63
+ +E VE VR +V +IP G+ +YG++A L GL S R+VG I+ D DLPWHRV+RA G
Sbjct 1 MDEETVERVRDVVTSIPPGQTLSYGEVAELAGLRSARLVGRILAEDGHDLPWHRVLRADG 60
Query 64 RPAQHLATRQLELLRAEGVLSVDGRV 89
R A H+A Q LRAEG+L VDGR+
Sbjct 61 RSAPHIAAEQAARLRAEGILMVDGRL 86
>gi|256375000|ref|YP_003098660.1| methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
[Actinosynnema mirum DSM 43827]
gi|255919303|gb|ACU34814.1| Methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
[Actinosynnema mirum DSM 43827]
Length=111
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/93 (51%), Positives = 64/93 (69%), Gaps = 1/93 (1%)
Query 6 DEQV-ELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIRASGR 64
DE++ EL+R V AIP GRV+TYGD+A L+ S R+VG ++ D DLPWHRV++A G
Sbjct 2 DEELHELIRETVRAIPEGRVATYGDVAKLSRAPSARLVGQVLNQDGHDLPWHRVLKADGT 61
Query 65 PAQHLATRQLELLRAEGVLSVDGRVALSEIRYE 97
A H+A QL+ LR+EGV+ G+V L R+E
Sbjct 62 CAPHIAEEQLQRLRSEGVVDGAGKVNLRTYRWE 94
>gi|284033231|ref|YP_003383162.1| methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
protein [Kribbella flavida DSM 17836]
gi|283812524|gb|ADB34363.1| Methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
protein [Kribbella flavida DSM 17836]
Length=100
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/92 (53%), Positives = 59/92 (65%), Gaps = 0/92 (0%)
Query 6 DEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIRASGRP 65
+E VE V V +IP GRV+TYGDIAA G PR VG IMR +PW RVIRASG P
Sbjct 6 EEYVEAVLRAVESIPPGRVATYGDIAAYVGQGGPRQVGAIMREYGGGVPWWRVIRASGVP 65
Query 66 AQHLATRQLELLRAEGVLSVDGRVALSEIRYE 97
A + QL+LLR +GV DG+V L +R++
Sbjct 66 ADEVVDDQLQLLRGDGVRVTDGKVDLRAVRWD 97
>gi|258652353|ref|YP_003201509.1| methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
[Nakamurella multipartita DSM 44233]
gi|258555578|gb|ACV78520.1| Methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
[Nakamurella multipartita DSM 44233]
Length=95
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/91 (51%), Positives = 62/91 (69%), Gaps = 1/91 (1%)
Query 7 EQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSD-LPWHRVIRASGRP 65
E + + +VAA+P GRV TYGD+AA G SPR+ G+++ + + PWHRV+R++G P
Sbjct 2 ELAQRMLDVVAAVPAGRVLTYGDVAARAGSRSPRLAGFVLANLADEGTPWHRVLRSNGTP 61
Query 66 AQHLATRQLELLRAEGVLSVDGRVALSEIRY 96
A HLA QL LRAEGVL+ DGRV L R+
Sbjct 62 APHLADEQLARLRAEGVLATDGRVDLRRYRW 92
>gi|336118835|ref|YP_004573607.1| hypothetical protein MLP_31900 [Microlunatus phosphovorus NM-1]
gi|334686619|dbj|BAK36204.1| hypothetical protein MLP_31900 [Microlunatus phosphovorus NM-1]
Length=101
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/96 (44%), Positives = 59/96 (62%), Gaps = 0/96 (0%)
Query 1 MAPVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIR 60
M+ + + VE V S V IP G+V++YGD+A G+ PR+VG +M T + +PW RV+R
Sbjct 1 MSLMDEAYVEAVLSAVERIPAGQVASYGDLAEYVGVGGPRLVGRVMSTQGAGVPWWRVVR 60
Query 61 ASGRPAQHLATRQLELLRAEGVLSVDGRVALSEIRY 96
A GRPA+ L L LRAEG + V RV + R+
Sbjct 61 ADGRPARGLEATALARLRAEGAVLVGDRVDMRRCRW 96
>gi|296270935|ref|YP_003653567.1| methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
protein [Thermobispora bispora DSM 43833]
gi|296093722|gb|ADG89674.1| Methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
protein [Thermobispora bispora DSM 43833]
Length=125
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 48/88 (55%), Gaps = 0/88 (0%)
Query 10 ELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIRASGRPAQHL 69
E V LV IP G V TYGD+A G PR VG +M +PW RVIRA GRPA HL
Sbjct 16 ERVLDLVERIPPGTVMTYGDVAEYLGEGGPRQVGRVMAEWGGAVPWWRVIRADGRPAPHL 75
Query 70 ATRQLELLRAEGVLSVDGRVALSEIRYE 97
A L LRAEGV RV L R+
Sbjct 76 AEECLARLRAEGVPFRGDRVDLRIARWN 103
>gi|92112647|ref|YP_572575.1| methylated-DNA-(protein)-cysteine S-methyltransferase [Chromohalobacter
salexigens DSM 3043]
gi|91795737|gb|ABE57876.1| O(6)-alkylguanine repair protein YbaZ [Chromohalobacter salexigens
DSM 3043]
Length=98
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/87 (50%), Positives = 54/87 (63%), Gaps = 4/87 (4%)
Query 7 EQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRT--DSSDLPWHRVIRASGR 64
E +E + ++VA IP GRV+TYG +A +T ++ R+VG MR LPWHRVI AS R
Sbjct 5 EVLEQIYTIVAQIPEGRVTTYGRVAGMTDAATARMVGSAMRHLPSGHGLPWHRVINASRR 64
Query 65 PAQHL-ATRQLELLRAEG-VLSVDGRV 89
+H A RQ E LRAEG V GRV
Sbjct 65 VTEHTGAVRQHEKLRAEGIVFDARGRV 91
>gi|152965137|ref|YP_001360921.1| DNA binding methylated-DNA-(protein)-cysteine S-methyltransferase
[Kineococcus radiotolerans SRS30216]
gi|151359654|gb|ABS02657.1| Methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding
[Kineococcus radiotolerans SRS30216]
Length=162
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/103 (44%), Positives = 55/103 (54%), Gaps = 7/103 (6%)
Query 2 APVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIRA 61
AP ++ E V +V AIP GRV TYGD+ L G PR VG ++R S PW RV+RA
Sbjct 49 APDLPDRAEEVLEVVHAIPPGRVLTYGDVGELVGDRGPRFVGNVLRRFGSHAPWWRVLRA 108
Query 62 SGRPAQHLATRQLELLRAEGVL-------SVDGRVALSEIRYE 97
G A LA R LE R EGV D RV L+ R++
Sbjct 109 DGSSAPPLAERALEHWREEGVPLRRLAHDPADVRVDLARARWD 151
>gi|50085904|ref|YP_047414.1| methyltransferase [Acinetobacter sp. ADP1]
gi|49531880|emb|CAG69592.1| putative methyltransferase [Acinetobacter sp. ADP1]
Length=133
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/93 (35%), Positives = 58/93 (63%), Gaps = 8/93 (8%)
Query 12 VRSLVAAIPLGRVSTYGDIAALTGL-SSPRIVGWIMRT--DSSDLPWHRVIRASGRPAQH 68
+ ++A +P G+V+TYG IA L GL R+VG+ ++ +SD+PWHR+I A G+ + +
Sbjct 36 ILEVIALVPFGKVATYGQIARLAGLPKHARLVGYTLKNIDQASDIPWHRIINAQGKVSTY 95
Query 69 LATR-----QLELLRAEGVLSVDGRVALSEIRY 96
+ QL LR EG++ ++G++ L + ++
Sbjct 96 HLNQIGENIQLNKLRDEGIVVLNGKINLKKYQW 128
>gi|257067679|ref|YP_003153934.1| putative methylated DNA-protein cysteine methyltransferase [Brachybacterium
faecium DSM 4810]
gi|256558497|gb|ACU84344.1| predicted methylated DNA-protein cysteine methyltransferase [Brachybacterium
faecium DSM 4810]
Length=97
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/95 (49%), Positives = 51/95 (54%), Gaps = 1/95 (1%)
Query 7 EQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIRASGRPA 66
E E VR++ A IP G V TYGDIA GL PR VG I+ S D+PW RVIRA G PA
Sbjct 3 EPEEAVRAIAARIPPGSVMTYGDIAVEAGLP-PRQVGRIVARISEDIPWWRVIRADGTPA 61
Query 67 QHLATRQLELLRAEGVLSVDGRVALSEIRYEFPPG 101
LL E V V GRV L +R P G
Sbjct 62 TCHDGTAPALLAREHVPFVGGRVDLRALRGSVPGG 96
>gi|325970570|ref|YP_004246761.1| methylated-DNA/protein-cysteine methyltransferase [Spirochaeta
sp. Buddy]
gi|324025808|gb|ADY12567.1| methylated-DNA/protein-cysteine methyltransferase [Spirochaeta
sp. Buddy]
Length=99
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/78 (43%), Positives = 47/78 (61%), Gaps = 2/78 (2%)
Query 12 VRSLVAAIPLGRVSTYGDIAALTGL-SSPRIVGWIMRTDSSDLPWHRVIRASGR-PAQHL 69
VR LV+ IP +V++YG IA++ G RIVGW MR +LPWHR+++A G P
Sbjct 8 VRDLVSRIPFAKVASYGQIASMLGDPRKARIVGWAMRGCPEELPWHRMVKADGSLPNAGF 67
Query 70 ATRQLELLRAEGVLSVDG 87
A Q +L EG++ +D
Sbjct 68 AELQKAMLEQEGIIFLDN 85
>gi|284992624|ref|YP_003411178.1| methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
protein [Geodermatophilus obscurus DSM 43160]
gi|284065869|gb|ADB76807.1| Methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding
protein [Geodermatophilus obscurus DSM 43160]
Length=129
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/87 (45%), Positives = 50/87 (58%), Gaps = 1/87 (1%)
Query 10 ELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRTDSSDLPWHRVIRASGRPAQHL 69
E V +V IP GRVSTYG + L G+ PR V + +PWHRV+RA G AQ +
Sbjct 43 EAVFDVVERIPAGRVSTYGAVGRLVGVG-PRRVARALAQGGGAVPWHRVVRADGSAAQAV 101
Query 70 ATRQLELLRAEGVLSVDGRVALSEIRY 96
QL LL AEGV +GRV L+ + +
Sbjct 102 RVEQLGLLAAEGVPVRNGRVDLAAVGW 128
>gi|338996720|ref|ZP_08635430.1| methylated-DNA-(protein)-cysteine S-methyltransferase [Halomonas
sp. TD01]
gi|338766361|gb|EGP21283.1| methylated-DNA-(protein)-cysteine S-methyltransferase [Halomonas
sp. TD01]
Length=99
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/87 (49%), Positives = 55/87 (64%), Gaps = 4/87 (4%)
Query 7 EQVELVRSLVAAIPLGRVSTYGDIAALTGLSSPRIVGWIMRT--DSSDLPWHRVIRASGR 64
E +E + ++V IP GRV+TYG IAA+T ++PR+VG MR + LPWHRVI AS +
Sbjct 5 ELLEQIYTIVDQIPAGRVTTYGRIAAMTEGATPRMVGSAMRHLPEGHQLPWHRVIAASLK 64
Query 65 PAQH-LATRQLELLRAEGVL-SVDGRV 89
A H A Q + LR EGV+ GRV
Sbjct 65 LADHGGADCQHQKLRNEGVMFDSKGRV 91
Lambda K H
0.320 0.136 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128767090968
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40