BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3208 Length=228 Score E Sequences producing significant alignments: (Bits) Value gi|15610344|ref|NP_217724.1| TetR family transcriptional regulat... 466 1e-129 gi|306782253|ref|ZP_07420590.1| transcriptional regulator, tetR-... 465 2e-129 gi|289755327|ref|ZP_06514705.1| TetR-family transcriptional regu... 464 5e-129 gi|240172127|ref|ZP_04750786.1| TetR family transcriptional regu... 417 9e-115 gi|254821580|ref|ZP_05226581.1| TetR-family protein transcriptio... 416 2e-114 gi|296169017|ref|ZP_06850682.1| TetR family transcriptional regu... 414 4e-114 gi|342861165|ref|ZP_08717814.1| TetR family transcriptional regu... 409 1e-112 gi|118463482|ref|YP_883303.1| TetR family transcriptional regula... 409 2e-112 gi|41409406|ref|NP_962242.1| hypothetical protein MAP3308 [Mycob... 407 4e-112 gi|118618011|ref|YP_906343.1| TetR family transcriptional regula... 399 2e-109 gi|308232378|ref|ZP_07415868.2| transcriptional regulator, tetR-... 397 7e-109 gi|308371274|ref|ZP_07424398.2| transcriptional regulator, tetR-... 397 8e-109 gi|289571431|ref|ZP_06451658.1| transcriptional regulator, tetR-... 395 2e-108 gi|15827358|ref|NP_301621.1| TetR family transcriptional regulat... 389 1e-106 gi|108798368|ref|YP_638565.1| TetR family transcriptional regula... 378 4e-103 gi|126434052|ref|YP_001069743.1| TetR family transcriptional reg... 375 2e-102 gi|118470500|ref|YP_886301.1| TetR family transcriptional regula... 371 4e-101 gi|120402794|ref|YP_952623.1| TetR family transcriptional regula... 368 4e-100 gi|333991563|ref|YP_004524177.1| TetR family transcriptional reg... 367 8e-100 gi|145225250|ref|YP_001135928.1| TetR family transcriptional reg... 365 3e-99 gi|169630608|ref|YP_001704257.1| TetR family transcriptional reg... 322 2e-86 gi|333921422|ref|YP_004495003.1| TetR family transcriptional reg... 295 4e-78 gi|226305687|ref|YP_002765647.1| TetR family transcriptional reg... 284 8e-75 gi|54026542|ref|YP_120784.1| putative transcriptional regulator ... 283 1e-74 gi|325675731|ref|ZP_08155415.1| TetR family transcriptional regu... 281 6e-74 gi|312140641|ref|YP_004007977.1| tetr family transcriptional reg... 281 7e-74 gi|111023322|ref|YP_706294.1| TetR family transcriptional regula... 280 1e-73 gi|226365829|ref|YP_002783612.1| TetR family transcriptional reg... 279 3e-73 gi|296138848|ref|YP_003646091.1| TetR family transcriptional reg... 260 1e-67 gi|262203390|ref|YP_003274598.1| TetR family transcriptional reg... 252 3e-65 gi|343927601|ref|ZP_08767069.1| putative TetR family transcripti... 234 7e-60 gi|296392652|ref|YP_003657536.1| TetR family transcriptional reg... 226 2e-57 gi|331694944|ref|YP_004331183.1| regulatory protein TetR [Pseudo... 221 5e-56 gi|134097664|ref|YP_001103325.1| TetR family transcriptional reg... 216 2e-54 gi|257054738|ref|YP_003132570.1| transcriptional regulator, TetR... 215 5e-54 gi|302524394|ref|ZP_07276736.1| transcriptional regulator [Strep... 214 7e-54 gi|317507508|ref|ZP_07965232.1| tetR family bacterial regulatory... 209 3e-52 gi|300783042|ref|YP_003763333.1| TetR family transcriptional reg... 207 8e-52 gi|256374977|ref|YP_003098637.1| TetR family transcriptional reg... 205 4e-51 gi|326383302|ref|ZP_08204990.1| regulatory protein TetR [Gordoni... 203 2e-50 gi|296270952|ref|YP_003653584.1| TetR family transcriptional reg... 202 4e-50 gi|319949509|ref|ZP_08023560.1| TetR family transcriptional regu... 200 2e-49 gi|284992630|ref|YP_003411184.1| TetR family transcriptional reg... 199 3e-49 gi|337768008|emb|CCB76721.1| TetR-family transcriptional regulat... 198 5e-49 gi|254388927|ref|ZP_05004158.1| TetR-family transcriptional regu... 197 1e-48 gi|291302047|ref|YP_003513325.1| TetR family transcriptional reg... 196 2e-48 gi|345009154|ref|YP_004811508.1| TetR family transcriptional reg... 196 3e-48 gi|158312773|ref|YP_001505281.1| TetR family transcriptional reg... 196 3e-48 gi|302536735|ref|ZP_07289077.1| TetR family transcriptional regu... 195 5e-48 gi|333024579|ref|ZP_08452643.1| putative TetR family transcripti... 195 5e-48 >gi|15610344|ref|NP_217724.1| TetR family transcriptional regulator [Mycobacterium tuberculosis H37Rv] gi|15842794|ref|NP_337831.1| TetR family transcriptional regulator [Mycobacterium tuberculosis CDC1551] gi|31794385|ref|NP_856878.1| TetR family transcriptional regulator [Mycobacterium bovis AF2122/97] 52 more sequence titles Length=228 Score = 466 bits (1198), Expect = 1e-129, Method: Compositional matrix adjust. Identities = 228/228 (100%), Positives = 228/228 (100%), Gaps = 0/228 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA Sbjct 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV Sbjct 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM Sbjct 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS Sbjct 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 >gi|306782253|ref|ZP_07420590.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu002] gi|306794964|ref|ZP_07433266.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu005] gi|306799165|ref|ZP_07437467.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu006] gi|308325009|gb|EFP13860.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu002] gi|308336747|gb|EFP25598.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu005] gi|308340586|gb|EFP29437.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu006] Length=228 Score = 465 bits (1196), Expect = 2e-129, Method: Compositional matrix adjust. Identities = 227/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA Sbjct 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV Sbjct 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM Sbjct 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAVGLVGMSVDCARYWLDADKP+SKSDAVEGTVQFAWGGLSHVPLTRS Sbjct 181 IAVGLVGMSVDCARYWLDADKPVSKSDAVEGTVQFAWGGLSHVPLTRS 228 >gi|289755327|ref|ZP_06514705.1| TetR-family transcriptional regulator [Mycobacterium tuberculosis EAS054] gi|289695914|gb|EFD63343.1| TetR-family transcriptional regulator [Mycobacterium tuberculosis EAS054] Length=228 Score = 464 bits (1194), Expect = 5e-129, Method: Compositional matrix adjust. Identities = 227/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA Sbjct 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV Sbjct 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM Sbjct 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTV+FAWGGLSHVPLTRS Sbjct 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVRFAWGGLSHVPLTRS 228 >gi|240172127|ref|ZP_04750786.1| TetR family transcriptional regulator [Mycobacterium kansasii ATCC 12478] Length=227 Score = 417 bits (1071), Expect = 9e-115, Method: Compositional matrix adjust. Identities = 205/228 (90%), Positives = 213/228 (94%), Gaps = 1/228 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MSDLAK AQRRA+RS+ RP E VPAPNR+GNRLPRDERRGQLLVVASDVFVDRGYHAA Sbjct 1 MSDLAKAAQRRAVRSADRMRPVE-VPAPNRKGNRLPRDERRGQLLVVASDVFVDRGYHAA 59 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHFSSKLELYLAVL RHV+NLV GV QAL TTTDNR RLH AV Sbjct 60 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLKRHVDNLVCGVQQALRTTTDNRGRLHAAV 119 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFI+HD QGYRLIFEND+VTEPEVAAQVRVATESCIDAVFALIS DSGLDPHRARM Sbjct 120 QAFFDFIDHDGQGYRLIFENDYVTEPEVAAQVRVATESCIDAVFALISEDSGLDPHRARM 179 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAVGLVGMSVDCARYWLD+D+PISKSDAVEGTVQFAWGGLSHVPL RS Sbjct 180 IAVGLVGMSVDCARYWLDSDRPISKSDAVEGTVQFAWGGLSHVPLARS 227 >gi|254821580|ref|ZP_05226581.1| TetR-family protein transcriptional regulator [Mycobacterium intracellulare ATCC 13950] Length=228 Score = 416 bits (1068), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 201/228 (89%), Positives = 213/228 (94%), Gaps = 0/228 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MS+LAK RRA+RS+ RP + APNRRGNRLPRDERRGQLL+VASDVFVDRGYHAA Sbjct 1 MSELAKMPARRAVRSADRGRPADGAAAPNRRGNRLPRDERRGQLLIVASDVFVDRGYHAA 60 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHF+SKLELYLAVL RHVENLVSGV QALSTT DNR+RLH AV Sbjct 61 GMDEIADRAGVSKPVLYQHFTSKLELYLAVLARHVENLVSGVQQALSTTKDNRRRLHAAV 120 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHDSQGYRLIFEND+VTEPEVAAQVRVATESCIDAVFALIS DSGLDPHRARM Sbjct 121 QAFFDFIEHDSQGYRLIFENDYVTEPEVAAQVRVATESCIDAVFALISEDSGLDPHRARM 180 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAVGLVG+SVDCARYWLD+D+PISK+DAVEGTVQFAWGGLSHVPLTRS Sbjct 181 IAVGLVGISVDCARYWLDSDRPISKADAVEGTVQFAWGGLSHVPLTRS 228 >gi|296169017|ref|ZP_06850682.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896314|gb|EFG75971.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] Length=228 Score = 414 bits (1065), Expect = 4e-114, Method: Compositional matrix adjust. Identities = 201/227 (89%), Positives = 215/227 (95%), Gaps = 0/227 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MS+LAK A RRA+RS+ +RP + V A +RRGNRLPRDERRGQLL+VASDVFVDRGYHAA Sbjct 1 MSELAKPAARRAVRSADRSRPGDGVAATSRRGNRLPRDERRGQLLIVASDVFVDRGYHAA 60 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIA+RAGVSKPVLYQHFSSKLELYLAVL RHVENLVSGV QALSTTTDNR+RLH AV Sbjct 61 GMDEIAERAGVSKPVLYQHFSSKLELYLAVLARHVENLVSGVQQALSTTTDNRRRLHAAV 120 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHDSQGYRLIFEND+VTEPEVAAQVRVATESCIDAVFALIS DSGLDPHRARM Sbjct 121 QAFFDFIEHDSQGYRLIFENDYVTEPEVAAQVRVATESCIDAVFALISEDSGLDPHRARM 180 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTR 227 IAVGLVG+SVDCARYWLD+D+PISK+DAVEGTVQFAWGGLSHVPLTR Sbjct 181 IAVGLVGISVDCARYWLDSDRPISKADAVEGTVQFAWGGLSHVPLTR 227 >gi|342861165|ref|ZP_08717814.1| TetR family transcriptional regulator [Mycobacterium colombiense CECT 3035] gi|342131609|gb|EGT84879.1| TetR family transcriptional regulator [Mycobacterium colombiense CECT 3035] Length=228 Score = 409 bits (1052), Expect = 1e-112, Method: Compositional matrix adjust. Identities = 200/228 (88%), Positives = 211/228 (93%), Gaps = 0/228 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MS+LAK RRA+RS+ RP + NRRGNRLPRDERRGQLLVVASDVFVDRGYHAA Sbjct 1 MSELAKVPARRAVRSADRGRPADGSAVSNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHFSSKLELYLAVL RHVENLVSGV ALSTTTDNR+RLH AV Sbjct 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLARHVENLVSGVQNALSTTTDNRRRLHSAV 120 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHDSQGYRLIFEND+VTEPEVAAQVRVATESCIDAVFALIS DSGLDPHRARM Sbjct 121 QAFFDFIEHDSQGYRLIFENDYVTEPEVAAQVRVATESCIDAVFALISEDSGLDPHRARM 180 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAVGLVG+SVDCARYWLD+D+PISK+DAV+GTVQFAWGGLSHVPLTRS Sbjct 181 IAVGLVGISVDCARYWLDSDRPISKADAVDGTVQFAWGGLSHVPLTRS 228 >gi|118463482|ref|YP_883303.1| TetR family transcriptional regulator [Mycobacterium avium 104] gi|254776594|ref|ZP_05218110.1| TetR-family protein transcriptional regulator [Mycobacterium avium subsp. avium ATCC 25291] gi|118164769|gb|ABK65666.1| TetR-family protein transcriptional regulator [Mycobacterium avium 104] gi|336459524|gb|EGO38461.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis S397] Length=228 Score = 409 bits (1050), Expect = 2e-112, Method: Compositional matrix adjust. Identities = 198/228 (87%), Positives = 211/228 (93%), Gaps = 0/228 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MS+LAK RRA++S+ RP + A NRRGNRLPRDERRGQLLVVASDVFVDRGYHAA Sbjct 1 MSELAKMPARRAVKSADRGRPTDGAAASNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHF+SKLELYLAVL RHVENLVSGV QALSTT DNR+RLH AV Sbjct 61 GMDEIADRAGVSKPVLYQHFTSKLELYLAVLARHVENLVSGVQQALSTTKDNRRRLHAAV 120 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHDSQGYRLIFEND+VTEPEVAAQVRVATESCIDAV+ALIS DSGLDPHRARM Sbjct 121 QAFFDFIEHDSQGYRLIFENDYVTEPEVAAQVRVATESCIDAVYALISEDSGLDPHRARM 180 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAVGLVG+SVDCARYWLD+D+PISK+DAVEGTV FAWGGLSHVPLTRS Sbjct 181 IAVGLVGISVDCARYWLDSDRPISKADAVEGTVAFAWGGLSHVPLTRS 228 >gi|41409406|ref|NP_962242.1| hypothetical protein MAP3308 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398237|gb|AAS05858.1| hypothetical protein MAP_3308 [Mycobacterium avium subsp. paratuberculosis K-10] Length=228 Score = 407 bits (1047), Expect = 4e-112, Method: Compositional matrix adjust. Identities = 197/228 (87%), Positives = 211/228 (93%), Gaps = 0/228 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MS+LAK RRA++S+ RP + A NRRGNRLPRDERRGQLLVVASDVFVDRGYHAA Sbjct 1 MSELAKMPARRAVKSADRGRPTDGAAASNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHF+SKLELYLAVL RHVENLVSGV QALSTT DNR+RLH AV Sbjct 61 GMDEIADRAGVSKPVLYQHFTSKLELYLAVLARHVENLVSGVQQALSTTKDNRRRLHAAV 120 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHDSQGYRLIFEND+VTEPEVAAQ+RVATESCIDAV+ALIS DSGLDPHRARM Sbjct 121 QAFFDFIEHDSQGYRLIFENDYVTEPEVAAQLRVATESCIDAVYALISEDSGLDPHRARM 180 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAVGLVG+SVDCARYWLD+D+PISK+DAVEGTV FAWGGLSHVPLTRS Sbjct 181 IAVGLVGISVDCARYWLDSDRPISKADAVEGTVAFAWGGLSHVPLTRS 228 >gi|118618011|ref|YP_906343.1| TetR family transcriptional regulator [Mycobacterium ulcerans Agy99] gi|183981373|ref|YP_001849664.1| TetR family transcriptional regulator [Mycobacterium marinum M] gi|118570121|gb|ABL04872.1| transcriptional regulator, TetR family [Mycobacterium ulcerans Agy99] gi|183174699|gb|ACC39809.1| transcriptional regulator, TetR family [Mycobacterium marinum M] Length=227 Score = 399 bits (1024), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 195/228 (86%), Positives = 207/228 (91%), Gaps = 1/228 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MSDLAK AQ RA+RS+ R E P RGNRLPRDERRGQLL+VASDVFVDRGYHAA Sbjct 1 MSDLAKAAQHRAVRSADRVRSTEGA-TPKARGNRLPRDERRGQLLIVASDVFVDRGYHAA 59 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIA+RAGVSKPVLYQHFSSKLELYLAVL+RHV+ LV+GV QAL TTTDNR RL+ AV Sbjct 60 GMDEIAERAGVSKPVLYQHFSSKLELYLAVLNRHVDKLVAGVQQALRTTTDNRGRLYAAV 119 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHDSQGYRLIFEND+VTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM Sbjct 120 QAFFDFIEHDSQGYRLIFENDYVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 179 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAV LV MSVDCARYWLD+D+PISKSDA+EGTVQFAWGGLSHVPL RS Sbjct 180 IAVALVSMSVDCARYWLDSDRPISKSDAIEGTVQFAWGGLSHVPLARS 227 >gi|308232378|ref|ZP_07415868.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu001] gi|308379448|ref|ZP_07486311.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu010] gi|308380610|ref|ZP_07490529.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu011] gi|308214079|gb|EFO73478.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu001] gi|308356894|gb|EFP45745.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu010] gi|308360894|gb|EFP49745.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu011] Length=194 Score = 397 bits (1020), Expect = 7e-109, Method: Compositional matrix adjust. Identities = 193/194 (99%), Positives = 194/194 (100%), Gaps = 0/194 (0%) Query 35 LPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRH 94 +PRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRH Sbjct 1 MPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRH 60 Query 95 VENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRV 154 VENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRV Sbjct 61 VENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRV 120 Query 155 ATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQ 214 ATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQ Sbjct 121 ATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQ 180 Query 215 FAWGGLSHVPLTRS 228 FAWGGLSHVPLTRS Sbjct 181 FAWGGLSHVPLTRS 194 >gi|308371274|ref|ZP_07424398.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu003] gi|308372463|ref|ZP_07428765.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu004] gi|308376028|ref|ZP_07445863.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu007] 7 more sequence titles Length=194 Score = 397 bits (1019), Expect = 8e-109, Method: Compositional matrix adjust. Identities = 192/194 (99%), Positives = 194/194 (100%), Gaps = 0/194 (0%) Query 35 LPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRH 94 +PRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRH Sbjct 1 MPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRH 60 Query 95 VENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRV 154 VENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRV Sbjct 61 VENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRV 120 Query 155 ATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQ 214 ATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKP+SKSDAVEGTVQ Sbjct 121 ATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPVSKSDAVEGTVQ 180 Query 215 FAWGGLSHVPLTRS 228 FAWGGLSHVPLTRS Sbjct 181 FAWGGLSHVPLTRS 194 >gi|289571431|ref|ZP_06451658.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis T17] gi|289545185|gb|EFD48833.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis T17] Length=231 Score = 395 bits (1016), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 206/231 (90%), Positives = 209/231 (91%), Gaps = 3/231 (1%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA Sbjct 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV Sbjct 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRAR- 179 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDP A Sbjct 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPATAPG 180 Query 180 MIAVGLVGMS-VDCARYWLDADKP-ISKSDAVEGTVQFAWGGLSHVPLTRS 228 MIAVG + Y LDA++ D VEGTVQFAWGGLSHVPLTRS Sbjct 181 MIAVGPGWKERSNAPGYGLDAEQSGFQIRDPVEGTVQFAWGGLSHVPLTRS 231 >gi|15827358|ref|NP_301621.1| TetR family transcriptional regulator [Mycobacterium leprae TN] gi|221229836|ref|YP_002503252.1| putative TetR-family transcriptional regulator [Mycobacterium leprae Br4923] gi|13092907|emb|CAC30325.1| putative TetR-family transcriptional regulator [Mycobacterium leprae] gi|219932943|emb|CAR70910.1| putative TetR-family transcriptional regulator [Mycobacterium leprae Br4923] Length=228 Score = 389 bits (1000), Expect = 1e-106, Method: Compositional matrix adjust. Identities = 187/227 (83%), Positives = 202/227 (89%), Gaps = 0/227 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 M++LAK AQRR +R R +D+ PN+R NRL RD+RRGQLL+VASDVFVD GYHAA Sbjct 1 MNNLAKAAQRRTVRPIDRGRLSDDIATPNQRSNRLSRDKRRGQLLIVASDVFVDHGYHAA 60 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHFSSKLELYLAVL RH+ NLVS V QAL TTT+NRQRLH AV Sbjct 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLERHMNNLVSSVQQALRTTTNNRQRLHAAV 120 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHD QGYRLIFEND +TEP VAAQVRVATESCIDAVFALISADS LDPHRARM Sbjct 121 QAFFDFIEHDGQGYRLIFENDNITEPRVAAQVRVATESCIDAVFALISADSRLDPHRARM 180 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTR 227 +AVGLVG+SVDCARYWLD ++PISKSDAVEGTVQFAWGGLSHVPLTR Sbjct 181 VAVGLVGISVDCARYWLDTNRPISKSDAVEGTVQFAWGGLSHVPLTR 227 >gi|108798368|ref|YP_638565.1| TetR family transcriptional regulator [Mycobacterium sp. MCS] gi|119867465|ref|YP_937417.1| TetR family transcriptional regulator [Mycobacterium sp. KMS] gi|108768787|gb|ABG07509.1| transcriptional regulator, TetR family [Mycobacterium sp. MCS] gi|119693554|gb|ABL90627.1| transcriptional regulator, TetR family [Mycobacterium sp. KMS] Length=224 Score = 378 bits (970), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 184/228 (81%), Positives = 200/228 (88%), Gaps = 4/228 (1%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MSDLA TA+R + + S +P NRRGNRLPRDERRGQLL+ AS+VFVDRGYHAA Sbjct 1 MSDLANTAERSGDKPASST----GLPKNNRRGNRLPRDERRGQLLIAASEVFVDRGYHAA 56 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHFSSKLELYLAVL RHV+N+VSGV QAL TTTDNRQRL AV Sbjct 57 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLQRHVDNMVSGVRQALRTTTDNRQRLRAAV 116 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHDSQGYRLIFEND+ TEP+VAAQV+VATE+C DAVF LIS DSGL+ HRARM Sbjct 117 QAFFDFIEHDSQGYRLIFENDYTTEPQVAAQVKVATEACTDAVFDLISRDSGLEAHRARM 176 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAVGLV +SVDCARYWLDAD+PISK DAV+GTV FAWGGLSHVPLTRS Sbjct 177 IAVGLVAISVDCARYWLDADRPISKDDAVDGTVHFAWGGLSHVPLTRS 224 >gi|126434052|ref|YP_001069743.1| TetR family transcriptional regulator [Mycobacterium sp. JLS] gi|126233852|gb|ABN97252.1| transcriptional regulator, TetR family [Mycobacterium sp. JLS] Length=224 Score = 375 bits (963), Expect = 2e-102, Method: Compositional matrix adjust. Identities = 182/228 (80%), Positives = 200/228 (88%), Gaps = 4/228 (1%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MSDLA TA+R + + S +P NRRGNRLPRDERRGQLL+ AS+VFVDRGYHAA Sbjct 1 MSDLANTAERSGDKPANST----GLPKNNRRGNRLPRDERRGQLLIAASEVFVDRGYHAA 56 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHFSSKLELYLAVL RHV+N+VSGV QAL TTTDNRQRL AV Sbjct 57 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLQRHVDNMVSGVRQALRTTTDNRQRLRAAV 116 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHDSQGYRLIFEND+ +EP+VAAQV+VATE+C DAVF LIS DSGL+ HRARM Sbjct 117 QAFFDFIEHDSQGYRLIFENDYTSEPQVAAQVKVATEACTDAVFDLISRDSGLEAHRARM 176 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAVGLV +SVDCARYWLDA++PISK DAV+GTV FAWGGLSHVPLTRS Sbjct 177 IAVGLVAISVDCARYWLDAERPISKDDAVDGTVHFAWGGLSHVPLTRS 224 >gi|118470500|ref|YP_886301.1| TetR family transcriptional regulator [Mycobacterium smegmatis str. MC2 155] gi|118171787|gb|ABK72683.1| TetR-family protein transcriptional regulator [Mycobacterium smegmatis str. MC2 155] Length=219 Score = 371 bits (952), Expect = 4e-101, Method: Compositional matrix adjust. Identities = 184/228 (81%), Positives = 197/228 (87%), Gaps = 9/228 (3%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MSDLA TA+RR G RP NRRGNRLPRDERRGQLL+ AS+VFVDRGYHAA Sbjct 1 MSDLANTAERR-----GEKRP----AGGNRRGNRLPRDERRGQLLIAASEVFVDRGYHAA 51 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHFSSKLELYLAVL RHV+NLVSGV QAL TTTDNRQRL AV Sbjct 52 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLQRHVDNLVSGVRQALRTTTDNRQRLRAAV 111 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 +AFFDFIEHDSQGYRLIFEND+VTEP+VAAQV+VATE+C DAVF LIS DSGL+ HRARM Sbjct 112 EAFFDFIEHDSQGYRLIFENDYVTEPQVAAQVKVATEACTDAVFDLISRDSGLEAHRARM 171 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAVGLV +SVD ARYWL+ D+PI K AVEGTVQFAWGGLSHVPLTRS Sbjct 172 IAVGLVAISVDSARYWLNNDRPIDKDSAVEGTVQFAWGGLSHVPLTRS 219 >gi|120402794|ref|YP_952623.1| TetR family transcriptional regulator [Mycobacterium vanbaalenii PYR-1] gi|119955612|gb|ABM12617.1| transcriptional regulator, TetR family [Mycobacterium vanbaalenii PYR-1] Length=224 Score = 368 bits (944), Expect = 4e-100, Method: Compositional matrix adjust. Identities = 178/228 (79%), Positives = 198/228 (87%), Gaps = 4/228 (1%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 MS++A+TAQRR + + A P RRGNR+PRDERRGQLL+ AS+VFVDRGYHAA Sbjct 1 MSEVARTAQRRGGQPANGASPS----GAARRGNRMPRDERRGQLLIAASEVFVDRGYHAA 56 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHF+SK+ELYLAVL RHV+NLVSGV QAL TTTDNRQR+ AV Sbjct 57 GMDEIADRAGVSKPVLYQHFTSKVELYLAVLQRHVDNLVSGVRQALRTTTDNRQRVRAAV 116 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QAFFDFIEHD QGYRLIFEND+VTEP+VAAQV+VATESC DAVF LIS DSGL+PHRARM Sbjct 117 QAFFDFIEHDGQGYRLIFENDYVTEPQVAAQVKVATESCTDAVFDLISHDSGLEPHRARM 176 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 IAVGLV +SVD ARYWL+ D+PI K DAVEGTVQF WGGLSHVP+TRS Sbjct 177 IAVGLVSISVDSARYWLNNDRPIDKDDAVEGTVQFIWGGLSHVPMTRS 224 >gi|333991563|ref|YP_004524177.1| TetR family transcriptional regulator [Mycobacterium sp. JDM601] gi|333487531|gb|AEF36923.1| TetR family transcriptional regulator [Mycobacterium sp. JDM601] Length=228 Score = 367 bits (942), Expect = 8e-100, Method: Compositional matrix adjust. Identities = 180/228 (79%), Positives = 196/228 (86%), Gaps = 1/228 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPA-PNRRGNRLPRDERRGQLLVVASDVFVDRGYHA 59 MS TA+R +S+G PA +RRG+RLPRDERRGQLL+ AS+VFVDRGYHA Sbjct 1 MSKPIDTAERGGGKSAGRGSGAAKAPAATSRRGSRLPRDERRGQLLIAASEVFVDRGYHA 60 Query 60 AGMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVA 119 AGMDEIADRAGVSKP+LYQHF+SKLELYLAVL RHVENLVSGV QAL TTTDNRQRL A Sbjct 61 AGMDEIADRAGVSKPILYQHFASKLELYLAVLARHVENLVSGVRQALRTTTDNRQRLRSA 120 Query 120 VQAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRAR 179 VQAFFDFIEHD QGYRLIFEND V EP+VA QVRVATESCIDA+F L+S DSGLDPHRAR Sbjct 121 VQAFFDFIEHDGQGYRLIFENDNVAEPQVAVQVRVATESCIDAIFDLVSHDSGLDPHRAR 180 Query 180 MIAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTR 227 M+AVGLV +SVDCARYWLD+D+PISK DAVEGTV FAWGGLSHVPLTR Sbjct 181 MVAVGLVAISVDCARYWLDSDRPISKEDAVEGTVAFAWGGLSHVPLTR 228 >gi|145225250|ref|YP_001135928.1| TetR family transcriptional regulator [Mycobacterium gilvum PYR-GCK] gi|315445547|ref|YP_004078426.1| TetR family transcriptional regulator [Mycobacterium sp. Spyr1] gi|145217736|gb|ABP47140.1| transcriptional regulator, TetR family [Mycobacterium gilvum PYR-GCK] gi|315263850|gb|ADU00592.1| transcriptional regulator, TetR family [Mycobacterium sp. Spyr1] Length=224 Score = 365 bits (936), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 184/234 (79%), Positives = 199/234 (86%), Gaps = 16/234 (6%) Query 1 MSDLAKTAQRRALR------SSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVD 54 MS+LAKTA RR + SSG+AR RGNRLPRDERRGQLL AS+VFVD Sbjct 1 MSELAKTAPRRGGQPANGTGSSGAAR----------RGNRLPRDERRGQLLAAASEVFVD 50 Query 55 RGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQ 114 RGYHAAGMDEIADRAGVSKPVLYQHFSSK+ELYLAVL RHV+NLVSGV QAL TTTDNRQ Sbjct 51 RGYHAAGMDEIADRAGVSKPVLYQHFSSKVELYLAVLQRHVDNLVSGVRQALRTTTDNRQ 110 Query 115 RLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLD 174 R+ AVQAFFDFIEHDSQGYRLIFEND+VTEP+VAAQV+VATESC DAVF LIS DSGL+ Sbjct 111 RVRAAVQAFFDFIEHDSQGYRLIFENDYVTEPQVAAQVKVATESCTDAVFDLISHDSGLE 170 Query 175 PHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 PHRARMIAVGLV +SVD ARYWL+ ++PI K DAVEGTVQF WGGLSHVPLTRS Sbjct 171 PHRARMIAVGLVSISVDSARYWLNNERPIDKDDAVEGTVQFIWGGLSHVPLTRS 224 >gi|169630608|ref|YP_001704257.1| TetR family transcriptional regulator [Mycobacterium abscessus ATCC 19977] gi|169242575|emb|CAM63603.1| Putative transcriptional regulator, TetR family [Mycobacterium abscessus] Length=228 Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 162/225 (72%), Positives = 177/225 (79%), Gaps = 1/225 (0%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 M DLAK A RR +S A D RRG RLPRDERRGQL+ AS++FVDRGYHAA Sbjct 1 MRDLAKLAGRRGTVNSTVATQDS-TQGNTRRGGRLPRDERRGQLVGSASEIFVDRGYHAA 59 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIADRAGVSKPVLYQHF SKLELYLAVLH+H +NLVS V QAL TTTDNRQRL AV Sbjct 60 GMDEIADRAGVSKPVLYQHFPSKLELYLAVLHKHADNLVSSVRQALRTTTDNRQRLRAAV 119 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 AFFDF+EHDSQGYRLIFEND V P+V+ +V A +C DAVF L+S DSGLDPH ARM Sbjct 120 MAFFDFVEHDSQGYRLIFENDLVGVPQVSERVEGAISACTDAVFDLVSHDSGLDPHHARM 179 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPL 225 +AVGLVG+S ARYWLD +KPISK DAV TV FAWGGLSHVPL Sbjct 180 VAVGLVGISQVSARYWLDNEKPISKDDAVNATVGFAWGGLSHVPL 224 >gi|333921422|ref|YP_004495003.1| TetR family transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] gi|333483643|gb|AEF42203.1| Transcriptional regulator, TetR family protein [Amycolicicoccus subflavus DQS3-9A1] Length=252 Score = 295 bits (755), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 142/213 (67%), Positives = 169/213 (80%), Gaps = 0/213 (0%) Query 16 SGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPV 75 +G R E P R+ RLPR RR QLL ASDVF +GYHAAGMDEIA+RAGVSKPV Sbjct 18 NGGVRGTEQPRTPARKNTRLPRGARRAQLLHAASDVFASQGYHAAGMDEIAERAGVSKPV 77 Query 76 LYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYR 135 LYQHF SKL+LYLAVL HVE L+SGV QAL +TT N+QRL+ AV AFFDF+++D+QGYR Sbjct 78 LYQHFPSKLDLYLAVLQAHVEKLISGVRQALRSTTHNKQRLYAAVMAFFDFVDNDTQGYR 137 Query 136 LIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARY 195 LIF++D +++P V +V A+E CIDAVF L+S DSGLDP+RARM+AVGLVG+S ARY Sbjct 138 LIFQSDALSDPSVQERVEQASEDCIDAVFDLVSHDSGLDPYRARMLAVGLVGVSQVNARY 197 Query 196 WLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 WL+A++PISKSDAVE TV AWGGLSHVP RS Sbjct 198 WLEANRPISKSDAVETTVTLAWGGLSHVPYQRS 230 >gi|226305687|ref|YP_002765647.1| TetR family transcriptional regulator [Rhodococcus erythropolis PR4] gi|229490972|ref|ZP_04384805.1| transcriptional regulator, TetR family [Rhodococcus erythropolis SK121] gi|226184804|dbj|BAH32908.1| putative TetR family transcriptional regulator [Rhodococcus erythropolis PR4] gi|229322088|gb|EEN87876.1| transcriptional regulator, TetR family [Rhodococcus erythropolis SK121] Length=223 Score = 284 bits (726), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 134/200 (67%), Positives = 163/200 (82%), Gaps = 0/200 (0%) Query 26 PAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLE 85 PA RR RLPRD RR QLL AS+VFV GYH+AGMDEIA+ AGVSKPVLYQHF KLE Sbjct 19 PAGTRRSTRLPRDARRLQLLAAASEVFVANGYHSAGMDEIAECAGVSKPVLYQHFPGKLE 78 Query 86 LYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTE 145 LY+AVL +V++L+SGV QAL +TTDN+QR+ AVQAFFDF+++DSQG+RL+FE+D + E Sbjct 79 LYVAVLQSYVDSLISGVRQALRSTTDNKQRVRAAVQAFFDFVDNDSQGFRLVFESDIMGE 138 Query 146 PEVAAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISK 205 P+V +V ATE+C+DAVF L+S DSGLDP+RAR++AVGLVG S ARYWL+A +PI K Sbjct 139 PQVQTRVEQATEACVDAVFDLVSQDSGLDPYRARILAVGLVGASQFTARYWLEAARPIPK 198 Query 206 SDAVEGTVQFAWGGLSHVPL 225 +AVE TV AWGGLSHVPL Sbjct 199 EEAVEITVTLAWGGLSHVPL 218 >gi|54026542|ref|YP_120784.1| putative transcriptional regulator [Nocardia farcinica IFM 10152] gi|54018050|dbj|BAD59420.1| putative transcriptional regulator [Nocardia farcinica IFM 10152] Length=226 Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 140/225 (63%), Positives = 172/225 (77%), Gaps = 8/225 (3%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 M+DL R L S D P +RG RLPRDERR QLL AS+VFV RGYHAA Sbjct 1 MTDLVDRMTARRLSS--------DALPPAKRGTRLPRDERRQQLLHAASEVFVLRGYHAA 52 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEI+ AGVSKPVLYQHF+SKLELY+AVL +V+ LVS V QAL +TTDNRQR+ AV Sbjct 53 GMDEISQVAGVSKPVLYQHFTSKLELYIAVLQNYVDMLVSSVRQALRSTTDNRQRVRAAV 112 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 QA+FDF++++ QG+RL+FE+D +EP+V +V ATE+C+DAVF L++ DSGLDP+RAR+ Sbjct 113 QAYFDFVDNEMQGFRLVFESDLTSEPQVQRRVEQATEACVDAVFDLVAHDSGLDPYRARI 172 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPL 225 +AVGLVG S ARYWL+AD+PI K +AV+ TV AWGGLSHVPL Sbjct 173 LAVGLVGASQFTARYWLEADRPIPKEEAVDTTVALAWGGLSHVPL 217 >gi|325675731|ref|ZP_08155415.1| TetR family transcriptional regulator [Rhodococcus equi ATCC 33707] gi|325553702|gb|EGD23380.1| TetR family transcriptional regulator [Rhodococcus equi ATCC 33707] Length=229 Score = 281 bits (718), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 133/197 (68%), Positives = 161/197 (82%), Gaps = 0/197 (0%) Query 29 NRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYL 88 RR RLPRD RR QLL AS+VFV RGYHAAGMDEIA+ AGVSKPVLYQHF KLELY+ Sbjct 28 TRRNTRLPRDARRLQLLAAASEVFVSRGYHAAGMDEIAECAGVSKPVLYQHFPGKLELYV 87 Query 89 AVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEV 148 AVL +V+ L+SGV QAL +TTDNRQR+ AVQAFFDF++ D+QG+RL+FE+D + EP+V Sbjct 88 AVLQSYVDTLISGVRQALRSTTDNRQRVRAAVQAFFDFVDTDTQGFRLVFESDLMGEPQV 147 Query 149 AAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDA 208 A +V ATE+C+DAVF L++ DSGLDP+RAR++AVGLVG S ARYWL+A +PI K +A Sbjct 148 ARRVEQATEACVDAVFDLVAHDSGLDPYRARILAVGLVGASQFTARYWLEAARPIPKEEA 207 Query 209 VEGTVQFAWGGLSHVPL 225 V+ TV AWGGLSHVPL Sbjct 208 VDTTVALAWGGLSHVPL 224 >gi|312140641|ref|YP_004007977.1| tetr family transcriptional regulator [Rhodococcus equi 103S] gi|311889980|emb|CBH49298.1| TetR family transcriptional regulator [Rhodococcus equi 103S] Length=223 Score = 281 bits (718), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 133/197 (68%), Positives = 161/197 (82%), Gaps = 0/197 (0%) Query 29 NRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYL 88 RR RLPRD RR QLL AS+VFV RGYHAAGMDEIA+ AGVSKPVLYQHF KLELY+ Sbjct 22 TRRNTRLPRDARRLQLLAAASEVFVSRGYHAAGMDEIAECAGVSKPVLYQHFPGKLELYV 81 Query 89 AVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEV 148 AVL +V+ L+SGV QAL +TTDNRQR+ AVQAFFDF++ D+QG+RL+FE+D + EP+V Sbjct 82 AVLQSYVDTLISGVRQALRSTTDNRQRVRAAVQAFFDFVDTDTQGFRLVFESDLMGEPQV 141 Query 149 AAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDA 208 A +V ATE+C+DAVF L++ DSGLDP+RAR++AVGLVG S ARYWL+A +PI K +A Sbjct 142 ARRVEQATEACVDAVFDLVAHDSGLDPYRARILAVGLVGASQFTARYWLEAARPIPKEEA 201 Query 209 VEGTVQFAWGGLSHVPL 225 V+ TV AWGGLSHVPL Sbjct 202 VDTTVALAWGGLSHVPL 218 >gi|111023322|ref|YP_706294.1| TetR family transcriptional regulator [Rhodococcus jostii RHA1] gi|110822852|gb|ABG98136.1| transcriptional regulator, TetR family protein [Rhodococcus jostii RHA1] Length=229 Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 132/196 (68%), Positives = 162/196 (83%), Gaps = 0/196 (0%) Query 30 RRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLA 89 RR RLPRD RR QLL AS+VFV RGYHAAGMDEIA+ AGVSKPVLYQHF KLELY+A Sbjct 29 RRSTRLPRDARRLQLLAAASEVFVTRGYHAAGMDEIAECAGVSKPVLYQHFPGKLELYVA 88 Query 90 VLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVA 149 VL +V++L+SGV QAL +TTDN+QR+ AVQAFFDF+++DSQG+RL+FE+D + EP+V Sbjct 89 VLQSYVDSLISGVRQALRSTTDNKQRVRAAVQAFFDFVDNDSQGFRLVFESDLMGEPQVQ 148 Query 150 AQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAV 209 ++V ATE+C+DAVF L+S DSGLDP+RAR++AVGLVG S ARYWL+A +PI K +AV Sbjct 149 SRVEQATEACVDAVFDLVSHDSGLDPYRARILAVGLVGASQFTARYWLEASRPIPKEEAV 208 Query 210 EGTVQFAWGGLSHVPL 225 + TV AWGGLS VPL Sbjct 209 DTTVTLAWGGLSRVPL 224 >gi|226365829|ref|YP_002783612.1| TetR family transcriptional regulator [Rhodococcus opacus B4] gi|226244319|dbj|BAH54667.1| putative TetR family transcriptional regulator [Rhodococcus opacus B4] Length=223 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 132/196 (68%), Positives = 162/196 (83%), Gaps = 0/196 (0%) Query 30 RRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLA 89 RR RLPRD RR QLL AS+VFV RGYHAAGMDEIA+ AGVSKPVLYQHF KLELY+A Sbjct 23 RRSTRLPRDARRLQLLAAASEVFVTRGYHAAGMDEIAECAGVSKPVLYQHFPGKLELYVA 82 Query 90 VLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVA 149 VL +V++L+SGV QAL +TTDN+QR+ AVQAFFDF+++DSQG+RL+FE+D + EP+V Sbjct 83 VLQSYVDSLISGVRQALRSTTDNKQRVRAAVQAFFDFVDNDSQGFRLVFESDLMGEPQVQ 142 Query 150 AQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAV 209 ++V ATE+C+DAVF L+S DSGLDP+RAR++AVGLVG S ARYWL+A +PI K +AV Sbjct 143 SRVEQATEACVDAVFDLVSHDSGLDPYRARILAVGLVGASQFTARYWLEAARPIPKEEAV 202 Query 210 EGTVQFAWGGLSHVPL 225 + TV AWGGLS VPL Sbjct 203 DTTVTLAWGGLSRVPL 218 >gi|296138848|ref|YP_003646091.1| TetR family transcriptional regulator [Tsukamurella paurometabola DSM 20162] gi|296026982|gb|ADG77752.1| transcriptional regulator, TetR family [Tsukamurella paurometabola DSM 20162] Length=223 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 139/225 (62%), Positives = 168/225 (75%), Gaps = 9/225 (4%) Query 1 MSDLAKTAQRRALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAA 60 M+DL T ++G +R + PAP RR RLPR RR QLL AS VFVD GYH+A Sbjct 1 MADLGATT------AAGESRGAVN-PAP-RRTARLPRSARRIQLLEAASSVFVDLGYHSA 52 Query 61 GMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAV 120 GMDEIA RAGVSKPVLYQHF KLELY+AVL+ H E LV+GV +ALS++TDN R+ AV Sbjct 53 GMDEIAVRAGVSKPVLYQHFPGKLELYVAVLNAHSEALVTGVREALSSSTDNHARVIGAV 112 Query 121 QAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARM 180 ++FFDF++ DSQGY+LIFE+D V EP V +V A ++CIDAV+ L+S DSGLDP+RARM Sbjct 113 RSFFDFVDRDSQGYKLIFESD-VLEPVVQERVEGAVDACIDAVYDLVSEDSGLDPYRARM 171 Query 181 IAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPL 225 +AVGLVG S ARYWL AD+PI K +AV TV+ WGGLSHVPL Sbjct 172 LAVGLVGASQVSARYWLYADRPIPKEEAVATTVELLWGGLSHVPL 216 >gi|262203390|ref|YP_003274598.1| TetR family transcriptional regulator [Gordonia bronchialis DSM 43247] gi|262086737|gb|ACY22705.1| regulatory protein TetR [Gordonia bronchialis DSM 43247] Length=237 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 122/195 (63%), Positives = 149/195 (77%), Gaps = 1/195 (0%) Query 31 RGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAV 90 R RLPR RR QLL AS++FV+RGYH+AGMDEIA AGVSKPVLYQHF SKL+LY+AV Sbjct 13 RNTRLPRSARRMQLLDAASEIFVERGYHSAGMDEIAVHAGVSKPVLYQHFPSKLDLYIAV 72 Query 91 LHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAA 150 + H E LV+ V+ AL TTTDNRQR+ AVQAFFDFI+ D+ GYRLIF +D +P V Sbjct 73 VDSHAEKLVNDVNTALRTTTDNRQRVRAAVQAFFDFIDEDNSGYRLIFSSD-AMDPAVIR 131 Query 151 QVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVE 210 ++ ATE+C+DAV+ L+ DSGLDP+R+RM+A GLVG S ARYWL+A +P+ K AV+ Sbjct 132 RIEGATEACVDAVYGLVMHDSGLDPYRSRMLAAGLVGASQVNARYWLEAKRPVDKQTAVD 191 Query 211 GTVQFAWGGLSHVPL 225 TV WGGLSHVPL Sbjct 192 TTVALLWGGLSHVPL 206 >gi|343927601|ref|ZP_08767069.1| putative TetR family transcriptional regulator [Gordonia alkanivorans NBRC 16433] gi|343762242|dbj|GAA13995.1| putative TetR family transcriptional regulator [Gordonia alkanivorans NBRC 16433] Length=203 Score = 234 bits (597), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 114/182 (63%), Positives = 141/182 (78%), Gaps = 1/182 (0%) Query 43 QLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGV 102 QLL AS++FV+RGYHAAGMDEIA AGVSKPVLYQHF SKL+LY+AV+ H E LVS V Sbjct 2 QLLDAASEIFVERGYHAAGMDEIAVHAGVSKPVLYQHFPSKLDLYIAVVDSHAEKLVSDV 61 Query 103 HQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDA 162 + AL TTTDNR+R+ AV+AFFDFI+ D+ GYRLIF +D ++P V +V ATE+C+DA Sbjct 62 NTALRTTTDNRKRVRAAVEAFFDFIDQDNSGYRLIFSSD-ASDPAVIRRVEGATEACVDA 120 Query 163 VFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSH 222 V+ L+ DSGLDP+R+RM+A GLVG S ARYWL+A +P+ K AV+ TV WGGLSH Sbjct 121 VYGLVMHDSGLDPYRSRMLASGLVGASQVNARYWLEAKRPVDKQTAVDTTVALLWGGLSH 180 Query 223 VP 224 P Sbjct 181 FP 182 >gi|296392652|ref|YP_003657536.1| TetR family transcriptional regulator [Segniliparus rotundus DSM 44985] gi|296179799|gb|ADG96705.1| transcriptional regulator, TetR family [Segniliparus rotundus DSM 44985] Length=213 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 117/197 (60%), Positives = 143/197 (73%), Gaps = 2/197 (1%) Query 28 PNRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELY 87 P RG RL + +RR LL A+DVF D G+H + M++IADRAGVSKPVLYQHF SKLELY Sbjct 16 PASRG-RLAKTDRRKLLLSAANDVFADSGFHKSSMEDIADRAGVSKPVLYQHFPSKLELY 74 Query 88 LAVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPE 147 L VL HVE LV V QAL +TTDN RL AV+AFFD I++D+QGY+LIF D V PE Sbjct 75 LTVLDGHVEELVLRVRQALRSTTDNNGRLIAAVRAFFDVIDNDTQGYKLIFNTD-VMLPE 133 Query 148 VAAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSD 207 V +++ AT++C+DAVF L+ DSGL H+ARMIAVGLVG+ AR+W D +PI+K + Sbjct 134 VQSRISRATDACVDAVFDLVRQDSGLGLHQARMIAVGLVGLIQVSARHWQDTGQPIAKEE 193 Query 208 AVEGTVQFAWGGLSHVP 224 AV V AWGGLS VP Sbjct 194 AVFAAVSLAWGGLSRVP 210 >gi|331694944|ref|YP_004331183.1| regulatory protein TetR [Pseudonocardia dioxanivorans CB1190] gi|326949633|gb|AEA23330.1| regulatory protein TetR [Pseudonocardia dioxanivorans CB1190] Length=205 Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 108/199 (55%), Positives = 140/199 (71%), Gaps = 0/199 (0%) Query 27 APNRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLEL 86 AP +RG RL R RR QLL+ A DVF +GYHAA MD+IA+RAGVSKPVLYQHF KLEL Sbjct 4 APVQRGARLSRSARRAQLLLAARDVFAAQGYHAAAMDDIAERAGVSKPVLYQHFPGKLEL 63 Query 87 YLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEP 146 Y A+L + + LV V A+ TTTDNR+R+H AV A+FDF+ + YRL+FE+D EP Sbjct 64 YRALLTTYADELVGSVRAAIDTTTDNRERVHAAVTAYFDFVAGEGGAYRLVFESDLRREP 123 Query 147 EVAAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKS 206 E AA V A CIDAV A+++ D+GLD RAR++AVGLVG+S A+YWLD+++ + + Sbjct 124 EAAAVVDGALSQCIDAVAAVVTEDAGLDDDRARLLAVGLVGLSQVTAQYWLDSEQTVPRD 183 Query 207 DAVEGTVQFAWGGLSHVPL 225 +A+ AW GL+ PL Sbjct 184 EAISLMSALAWRGLAGFPL 202 >gi|134097664|ref|YP_001103325.1| TetR family transcriptional regulator [Saccharopolyspora erythraea NRRL 2338] gi|291006377|ref|ZP_06564350.1| TetR family transcriptional regulator [Saccharopolyspora erythraea NRRL 2338] gi|133910287|emb|CAM00400.1| transcriptional regulator, TetR family [Saccharopolyspora erythraea NRRL 2338] Length=206 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 107/195 (55%), Positives = 135/195 (70%), Gaps = 0/195 (0%) Query 31 RGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAV 90 RG RLPRD RR QLL A VFV GYHAA MD+IA+RAGVSKPVLYQHF KLELYLA+ Sbjct 9 RGVRLPRDARRAQLLDAAQHVFVHNGYHAAAMDDIAERAGVSKPVLYQHFPGKLELYLAL 68 Query 91 LHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAA 150 L H LV V QA+ +T DN+ R+ AV A ++F++ + Q +RL+FE+D +EP V Sbjct 69 LETHGGELVRRVRQAIESTPDNKHRVRAAVAALYEFVDTEGQAFRLVFESDLRSEPSVEQ 128 Query 151 QVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVE 210 V+ A CIDAV ++AD+GLD RAR++AVGLVG+S ARYWLDA + +S+ +AV Sbjct 129 AVQNALSGCIDAVAEAVTADAGLDHERARLLAVGLVGLSQVTARYWLDASQTVSRDEAVT 188 Query 211 GTVQFAWGGLSHVPL 225 AW G+S PL Sbjct 189 LMSTLAWKGISGFPL 203 >gi|257054738|ref|YP_003132570.1| transcriptional regulator, TetR family [Saccharomonospora viridis DSM 43017] gi|256584610|gb|ACU95743.1| transcriptional regulator, TetR family [Saccharomonospora viridis DSM 43017] Length=221 Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 107/197 (55%), Positives = 141/197 (72%), Gaps = 2/197 (1%) Query 31 RGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAV 90 RG RLPR ERR QLL A +VF GYHAA MD+IA+RAGVSKPVLYQHF KL+LY+A+ Sbjct 23 RGVRLPRTERRAQLLAAAQEVFAANGYHAAAMDDIAERAGVSKPVLYQHFPGKLDLYIAL 82 Query 91 LHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAA 150 L HV+ LVS V QAL++TTDN+QR+ AV+AFF+F+ +D +R++FE+D EP V Sbjct 83 LESHVDTLVSTVQQALASTTDNKQRVRNAVRAFFEFVNNDVGAFRMVFESDLRGEPAVQE 142 Query 151 QVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVE 210 V AT + +DA+ I+AD+GLD +AR++AVGLVGMS AR+WL A+ +S +AV Sbjct 143 AVDRATSASVDAITETITADAGLDEEKARLLAVGLVGMSQVSARFWL-ANSSMSLEEAVS 201 Query 211 GTVQFAWGGL-SHVPLT 226 T AW G+ + PL+ Sbjct 202 LTSTLAWRGIGAGFPLS 218 >gi|302524394|ref|ZP_07276736.1| transcriptional regulator [Streptomyces sp. AA4] gi|302433289|gb|EFL05105.1| transcriptional regulator [Streptomyces sp. AA4] Length=207 Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 103/191 (54%), Positives = 136/191 (72%), Gaps = 0/191 (0%) Query 30 RRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLA 89 +RG RLPR ERR QLL A VF + GYHAA MDEIA+ AGVSKPVLYQHF KL+LY+A Sbjct 8 QRGVRLPRTERRAQLLTAAQRVFAEHGYHAAAMDEIAEEAGVSKPVLYQHFPGKLDLYIA 67 Query 90 VLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVA 149 +L HV++LV V AL++TTDNRQR+ V AFFDF+ +D+ +R++FE+D EP V Sbjct 68 LLESHVDDLVGRVQGALNSTTDNRQRVPATVGAFFDFVNNDAGAFRMVFESDLRGEPAVQ 127 Query 150 AQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAV 209 V AT + ++A+ I++D+GLD +AR++AVGLVGMS ARYWL ++ +S+ DAV Sbjct 128 EAVDRATSASVEAITETITSDAGLDEEKARLLAVGLVGMSQVSARYWLQHNQSMSREDAV 187 Query 210 EGTVQFAWGGL 220 T AW G+ Sbjct 188 ALTANLAWRGI 198 >gi|317507508|ref|ZP_07965232.1| tetR family bacterial regulatory protein [Segniliparus rugosus ATCC BAA-974] gi|316254195|gb|EFV13541.1| tetR family bacterial regulatory protein [Segniliparus rugosus ATCC BAA-974] Length=206 Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 108/199 (55%), Positives = 141/199 (71%), Gaps = 2/199 (1%) Query 26 PAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLE 85 P P RG RL + +RR LL A++VF + G+H A ++EIA+RAGVSKPVLYQHF SKLE Sbjct 8 PRPAGRG-RLAKLDRRKLLLDAANEVFAEHGFHKASVEEIAERAGVSKPVLYQHFPSKLE 66 Query 86 LYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTE 145 LYL VL +HVE L+ V QAL +T+N RL AV+ FFD I+ +++GYRL+F D V + Sbjct 67 LYLTVLDQHVEELMLRVRQALRASTNNHDRLVEAVRVFFDVIDTNTRGYRLLFSTDLV-Q 125 Query 146 PEVAAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISK 205 EV ++ AT++C+DAVF L+ DSGLD + ARMIAV LVG+ A++W D KPI K Sbjct 126 AEVRTRIMKATDACVDAVFDLVRQDSGLDLYHARMIAVNLVGLIHVSAQHWQDNGKPIPK 185 Query 206 SDAVEGTVQFAWGGLSHVP 224 +A+ TV FAWGGL+ VP Sbjct 186 EEAIMATVAFAWGGLARVP 204 >gi|300783042|ref|YP_003763333.1| TetR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|299792556|gb|ADJ42931.1| TetR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|340524421|gb|AEK39626.1| TetR family transcriptional regulator [Amycolatopsis mediterranei S699] Length=208 Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 101/192 (53%), Positives = 132/192 (69%), Gaps = 0/192 (0%) Query 29 NRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYL 88 +RG RLPR ERR QLL A VF + GYHAA MDEIA+ AGVSKPVLYQHF KL+LY+ Sbjct 8 QQRGVRLPRTERRAQLLAAAQRVFAENGYHAAAMDEIAEVAGVSKPVLYQHFPGKLDLYI 67 Query 89 AVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEV 148 A+L HV+ LV V AL +TT+N+QR+ V AFFDF+ D+ +R++FE+D EP V Sbjct 68 ALLESHVDELVKRVQNALDSTTENKQRVPATVGAFFDFVSEDAGAFRMVFESDLRGEPAV 127 Query 149 AAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDA 208 V AT + +DA+ I+AD+GLD +AR++AVGLVGMS AR+WL + +S+ +A Sbjct 128 QEAVDRATSASVDAITETITADAGLDEDKARLLAVGLVGMSQVSARFWLAHHQSMSREEA 187 Query 209 VEGTVQFAWGGL 220 V T AW G+ Sbjct 188 VALTANLAWRGI 199 >gi|256374977|ref|YP_003098637.1| TetR family transcriptional regulator [Actinosynnema mirum DSM 43827] gi|255919280|gb|ACU34791.1| transcriptional regulator, TetR family [Actinosynnema mirum DSM 43827] Length=214 Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 106/191 (56%), Positives = 133/191 (70%), Gaps = 0/191 (0%) Query 31 RGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAV 90 RG RLPR RR QLL A DVFV GYHAA MDEIA+RAGVSKPVLYQHF KLELY+A+ Sbjct 17 RGVRLPRTARRAQLLAAAQDVFVSNGYHAAAMDEIAERAGVSKPVLYQHFPGKLELYMAL 76 Query 91 LHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAA 150 L HV+ LV+ V A+ +TTDN+QR+ AV AF+DF++ Q +R++FE+D EP VA+ Sbjct 77 LESHVDGLVARVRGAIGSTTDNKQRVRAAVAAFYDFVDDQGQAFRMVFESDLRGEPAVAS 136 Query 151 QVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVE 210 V AT +DA+ I++D+GLD HRAR++A GLVG+S AR WL D+ I K DAV Sbjct 137 AVERATADSVDAITETITSDAGLDEHRARLLATGLVGLSQVTARSWLAGDRAIPKEDAVT 196 Query 211 GTVQFAWGGLS 221 AW G+ Sbjct 197 LISNLAWKGIG 207 >gi|326383302|ref|ZP_08204990.1| regulatory protein TetR [Gordonia neofelifaecis NRRL B-59395] gi|326198052|gb|EGD55238.1| regulatory protein TetR [Gordonia neofelifaecis NRRL B-59395] Length=168 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 98/163 (61%), Positives = 124/163 (77%), Gaps = 1/163 (0%) Query 62 MDEIADRAGVSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQ 121 MDEIA AGVSKPVLYQHF SKL+LY+AV+ H E LV+ V++AL TT DNRQR+ AV+ Sbjct 1 MDEIAIHAGVSKPVLYQHFPSKLDLYIAVVDSHAEKLVADVNRALLTTADNRQRVQAAVE 60 Query 122 AFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARMI 181 AFFDFI+ D+ GYRLIF +D +P V +V ATE+C+DAV+ L+ DSG+DP+R+RM+ Sbjct 61 AFFDFIDDDNSGYRLIFASD-AMDPAVIRRVEGATEACVDAVYGLVMQDSGMDPYRSRML 119 Query 182 AVGLVGMSVDCARYWLDADKPISKSDAVEGTVQFAWGGLSHVP 224 A GLVG SV ARYW+DA +PI K+ AV+ T WGGL+ VP Sbjct 120 AAGLVGASVVNARYWVDASRPIDKASAVDTTAALLWGGLAGVP 162 >gi|296270952|ref|YP_003653584.1| TetR family transcriptional regulator [Thermobispora bispora DSM 43833] gi|296093739|gb|ADG89691.1| transcriptional regulator, TetR family [Thermobispora bispora DSM 43833] Length=206 Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 99/202 (50%), Positives = 132/202 (66%), Gaps = 0/202 (0%) Query 25 VPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKL 84 P RG RLPR RR QLL A +VFV+ GYHAA MDEIA+RAGVSKPVLYQHF KL Sbjct 4 TPDAKPRGTRLPRMARRRQLLRAAQEVFVENGYHAAAMDEIAERAGVSKPVLYQHFPGKL 63 Query 85 ELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVT 144 ELYLA+L +HV+++V+ QAL++TTDN+QR++ A+ AFFDF+ + +RL+FE+D Sbjct 64 ELYLALLDQHVDDIVARCRQALASTTDNKQRVYAAINAFFDFVSSQGEAFRLVFESDLRN 123 Query 145 EPEVAAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPIS 204 V ++ + C DA+ +I D+G A ++ VGLVGM+ ARYWL + I Sbjct 124 VAAVRQRMERSLRECADAISQVIQEDTGCSADEAHLLGVGLVGMAEVSARYWLRSHGSIP 183 Query 205 KSDAVEGTVQFAWGGLSHVPLT 226 K AV+ + AW G+S P T Sbjct 184 KDAAVQLIARLAWRGISGFPRT 205 >gi|319949509|ref|ZP_08023560.1| TetR family transcriptional regulator [Dietzia cinnamea P4] gi|319436823|gb|EFV91892.1| TetR family transcriptional regulator [Dietzia cinnamea P4] Length=219 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 100/190 (53%), Positives = 135/190 (72%), Gaps = 1/190 (0%) Query 35 LPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLHRH 94 LPR RR QL+ A VFV++G+HA+GMD+IA AGVSKPVLYQHF SK +LY+ VL H Sbjct 20 LPRGARRSQLIDAAGTVFVEQGFHASGMDDIAVLAGVSKPVLYQHFDSKRDLYIEVLRHH 79 Query 95 VENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAAQVRV 154 V+ L+ + AL +T+DNR+R+ AV FF + ++D++G+RL+F ++ E +V ++ Sbjct 80 VDALLGRIRAALDSTSDNRRRVEAAVDTFFAYADNDTRGFRLVFYSESGDE-DVRRELDR 138 Query 155 ATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVEGTVQ 214 ATE CIDAV L+ DSGLD HR+R++AVGLVG S A +WLDA +PI + DAV TV Sbjct 139 ATEGCIDAVHDLVRGDSGLDVHRSRLLAVGLVGASRVSAGHWLDAGRPIPREDAVSTTVT 198 Query 215 FAWGGLSHVP 224 WGGLS +P Sbjct 199 LCWGGLSKIP 208 >gi|284992630|ref|YP_003411184.1| TetR family transcriptional regulator [Geodermatophilus obscurus DSM 43160] gi|284065875|gb|ADB76813.1| transcriptional regulator, TetR family [Geodermatophilus obscurus DSM 43160] Length=216 Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 99/199 (50%), Positives = 130/199 (66%), Gaps = 0/199 (0%) Query 26 PAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLE 85 PAP RR +RLPR RR QLL A +VFV +GYHAA MDEIADRAGVSKPVLYQHF K E Sbjct 8 PAPVRRSSRLPRGARRAQLLQAAQEVFVAQGYHAAAMDEIADRAGVSKPVLYQHFPGKRE 67 Query 86 LYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTE 145 LYLA+L + V +L V +A+ T DNR R++ AV A+FDFI D +RL+FE+D + Sbjct 68 LYLALLEQQVTSLTDRVREAMEGTDDNRTRVNGAVGAYFDFINADGAAFRLVFESDLNND 127 Query 146 PEVAAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISK 205 +V +C++A+ +I+AD+GLD RA ++A GL G+S AR+WL +S+ Sbjct 128 EDVRELADRGHRACVEAIGEVIAADTGLDRERALLLASGLTGLSETSARWWLPRKGTVSR 187 Query 206 SDAVEGTVQFAWGGLSHVP 224 +AV AW G+S P Sbjct 188 DEAVSLLTALAWRGISGFP 206 >gi|337768008|emb|CCB76721.1| TetR-family transcriptional regulator [Streptomyces cattleya NRRL 8057] Length=216 Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 95/195 (49%), Positives = 131/195 (68%), Gaps = 0/195 (0%) Query 31 RGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAV 90 RG RLPR RR QLL A +VFV +GYHAA MD+IA+RAGVSKPVLYQHF KLELYLA+ Sbjct 12 RGTRLPRRARRNQLLGAAQEVFVAQGYHAAAMDDIAERAGVSKPVLYQHFPGKLELYLAL 71 Query 91 LHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAA 150 L +H E L+ V ALSTTTDN++R+ ++A+F ++E + +RL+FE+D EP V Sbjct 72 LDQHCEALLQSVRTALSTTTDNKKRVEATMRAYFAYVEDEGGAFRLVFESDLTNEPAVRE 131 Query 151 QVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVE 210 +V + C +A+ +I+ D+GL +A ++AVGL G+S ARYWL + + +AV+ Sbjct 132 RVDKVSLDCAEAISEVIAEDTGLAKEQAMLLAVGLGGVSQVVARYWLSTGSRLPREEAVQ 191 Query 211 GTVQFAWGGLSHVPL 225 AW G++ PL Sbjct 192 LLTSLAWRGIAGFPL 206 >gi|254388927|ref|ZP_05004158.1| TetR-family transcriptional regulator [Streptomyces clavuligerus ATCC 27064] gi|294814862|ref|ZP_06773505.1| TetR-family transcriptional regulator [Streptomyces clavuligerus ATCC 27064] gi|326443239|ref|ZP_08217973.1| TetR family transcriptional regulator [Streptomyces clavuligerus ATCC 27064] gi|197702645|gb|EDY48457.1| TetR-family transcriptional regulator [Streptomyces clavuligerus ATCC 27064] gi|294327461|gb|EFG09104.1| TetR-family transcriptional regulator [Streptomyces clavuligerus ATCC 27064] Length=220 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 96/203 (48%), Positives = 132/203 (66%), Gaps = 0/203 (0%) Query 23 EDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSS 82 E A RG RLPR RR QLL A +VFV +GYHAA MD+IA+RAGVSKPVLYQHF Sbjct 5 EQTEAARPRGTRLPRRARRNQLLGAAQEVFVAQGYHAAAMDDIAERAGVSKPVLYQHFPG 64 Query 83 KLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDF 142 KLELYLA+L +H E L+ GV AL++T+DN+QR+ + A+F ++E + +RL+FE+D Sbjct 65 KLELYLALLDQHCEALLHGVRTALASTSDNKQRVAATMDAYFAYVEDEGGAFRLVFESDL 124 Query 143 VTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKP 202 EP V +V + C +A+ +I+ D+GL + ++AVGL G+S ARYWL + Sbjct 125 TNEPAVRERVDRVSLQCAEAISEVIAEDTGLSKEESMLLAVGLGGVSQVVARYWLSSGSS 184 Query 203 ISKSDAVEGTVQFAWGGLSHVPL 225 I + AV+ AW G++ PL Sbjct 185 IPRETAVQLLTSLAWRGIAGFPL 207 >gi|291302047|ref|YP_003513325.1| TetR family transcriptional regulator [Stackebrandtia nassauensis DSM 44728] gi|290571267|gb|ADD44232.1| transcriptional regulator, TetR family [Stackebrandtia nassauensis DSM 44728] Length=206 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 93/195 (48%), Positives = 129/195 (67%), Gaps = 0/195 (0%) Query 31 RGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAV 90 RG R+PR ERR QLL A + FV RGYH MD+IA+RAGVSKPVLYQHF K++LYLA+ Sbjct 7 RGARMPRTERRRQLLDSAREEFVARGYHNTAMDDIAERAGVSKPVLYQHFPGKMDLYLAL 66 Query 91 LHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAA 150 L H E LV V A+ +T+DN+QR+H A+QA+FDF++ + +RL+FE+D EP VA Sbjct 67 LDTHGEALVETVRTAMESTSDNKQRVHRAMQAYFDFVDAQGEAFRLVFESDLRNEPAVAE 126 Query 151 QVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVE 210 +V + C A+ I D+G+D RA ++A+GL G + AR WL + + + K +AV+ Sbjct 127 RVDRVSRDCGSAIAETIMGDTGVDRQRAELLAIGLTGAAEMAARRWLASKRAVPKEEAVQ 186 Query 211 GTVQFAWGGLSHVPL 225 +W G+S PL Sbjct 187 LLATLSWRGISKFPL 201 >gi|345009154|ref|YP_004811508.1| TetR family transcriptional regulator [Streptomyces violaceusniger Tu 4113] gi|344035503|gb|AEM81228.1| transcriptional regulator, TetR family [Streptomyces violaceusniger Tu 4113] Length=213 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 92/195 (48%), Positives = 132/195 (68%), Gaps = 0/195 (0%) Query 31 RGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAV 90 RG RLPR RR QLL A +VFV +GYHAA MD+IA+RAGVSKPVLYQHF KLELYLA+ Sbjct 12 RGTRLPRRARRNQLLGAAQEVFVAQGYHAAAMDDIAERAGVSKPVLYQHFPGKLELYLAL 71 Query 91 LHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAA 150 L +H E+L+ V AL++TT+N+QR+ ++A+F ++E + +RL+FE+D EP V Sbjct 72 LDQHCESLLHAVRTALASTTENKQRVAATMEAYFAYVEEEGGAFRLVFESDLTNEPAVRE 131 Query 151 QVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVE 210 +V + C +A+ +I+ D+GL + ++AVGL G+S ARYWL ++ + + AV+ Sbjct 132 RVDRVSLQCAEAISEVIAEDTGLSRDESMLLAVGLGGISQVVARYWLSSESEVPRETAVQ 191 Query 211 GTVQFAWGGLSHVPL 225 AW G++ PL Sbjct 192 LLTSLAWRGIAGFPL 206 >gi|158312773|ref|YP_001505281.1| TetR family transcriptional regulator [Frankia sp. EAN1pec] gi|158108178|gb|ABW10375.1| transcriptional regulator, TetR family [Frankia sp. EAN1pec] Length=215 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 98/194 (51%), Positives = 131/194 (68%), Gaps = 0/194 (0%) Query 31 RGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAV 90 R RLPR RR QLL A +VFV +GYHAA MDEIA+RAGVSKPVLYQHF KL+LYLA+ Sbjct 14 RTPRLPRTARRFQLLGAAREVFVAQGYHAAAMDEIAERAGVSKPVLYQHFPGKLDLYLAL 73 Query 91 LHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDFVTEPEVAA 150 L H E LVS V AL++TTDN R+ +++A+FDF+ S ++L+ E+D +EP V Sbjct 74 LDEHSEKLVSAVRAALASTTDNHIRIERSIRAYFDFVADPSGAHQLVLESDLRSEPAVRQ 133 Query 151 QVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKPISKSDAVE 210 +V + C+ A+ A I AD+GL A ++A+GLVG++ AR+WL D +SK AVE Sbjct 134 RVENTSAQCVRAIAATIVADTGLPQEEADLLAMGLVGLAESGARWWLLRDGRVSKERAVE 193 Query 211 GTVQFAWGGLSHVP 224 V+ AW G++ P Sbjct 194 SLVELAWRGIAGYP 207 >gi|302536735|ref|ZP_07289077.1| TetR family transcriptional regulator [Streptomyces sp. C] gi|302445630|gb|EFL17446.1| TetR family transcriptional regulator [Streptomyces sp. C] Length=212 Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 94/203 (47%), Positives = 132/203 (66%), Gaps = 0/203 (0%) Query 23 EDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAGVSKPVLYQHFSS 82 E A RG RLPR RR QLL A +VFV +GYHAA MD+IA+RAGVSKPVLYQHF Sbjct 5 EQTEAARPRGTRLPRRARRNQLLGAAQEVFVAQGYHAAAMDDIAERAGVSKPVLYQHFPG 64 Query 83 KLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHDSQGYRLIFENDF 142 KL+LYLA+L +H ENL+ V AL +T+DN+ R+ + A+F ++E + +RL+FE+D Sbjct 65 KLDLYLALLDQHCENLLQAVRGALESTSDNKLRVAATMDAYFAYVEDEGGAFRLVFESDL 124 Query 143 VTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSVDCARYWLDADKP 202 EP V +V + C +A+ +I+ D+GL + ++AVGL G+S ARYWL ++ P Sbjct 125 TNEPAVRERVDRVSLQCAEAISDVIAEDTGLSKDESMLLAVGLGGVSQVVARYWLSSESP 184 Query 203 ISKSDAVEGTVQFAWGGLSHVPL 225 +++ AV AW G++ PL Sbjct 185 VARDTAVGLLTSLAWRGIAGFPL 207 >gi|333024579|ref|ZP_08452643.1| putative TetR family transcriptional regulator [Streptomyces sp. Tu6071] gi|332744431|gb|EGJ74872.1| putative TetR family transcriptional regulator [Streptomyces sp. Tu6071] Length=225 Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 97/218 (45%), Positives = 135/218 (62%), Gaps = 0/218 (0%) Query 11 RALRSSGSARPDEDVPAPNRRGNRLPRDERRGQLLVVASDVFVDRGYHAAGMDEIADRAG 70 +A G E A RG RLPR RR QLL A +VFV +GYHAA MD+IA+RAG Sbjct 2 KATNLGGGVSAIEQTEAARPRGTRLPRRARRNQLLGAAQEVFVAQGYHAAAMDDIAERAG 61 Query 71 VSKPVLYQHFSSKLELYLAVLHRHVENLVSGVHQALSTTTDNRQRLHVAVQAFFDFIEHD 130 VSKPVLYQHF KL+LYLA+L +H E L+ V AL++TTDN+QR+ + A+F ++E D Sbjct 62 VSKPVLYQHFPGKLDLYLALLDQHCEALLQAVRAALASTTDNKQRVQATMDAYFGYVEDD 121 Query 131 SQGYRLIFENDFVTEPEVAAQVRVATESCIDAVFALISADSGLDPHRARMIAVGLVGMSV 190 +RL+FE+D EP V +V T C +A+ +I+ D+GL + ++A GL G++ Sbjct 122 GGAFRLVFESDLTNEPAVRERVDRVTAQCAEAICDVIAEDTGLSRDESMLLASGLGGLAQ 181 Query 191 DCARYWLDADKPISKSDAVEGTVQFAWGGLSHVPLTRS 228 AR WL +D+ + + AV+ AW G++ PL S Sbjct 182 VVARSWLHSDRSVPRDTAVQLLASLAWRGIAGFPLYGS 219 Lambda K H 0.321 0.134 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 294240045594 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40