BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3212 Length=407 Score E Sequences producing significant alignments: (Bits) Value gi|15610348|ref|NP_217728.1| hypothetical protein Rv3212 [Mycoba... 798 0.0 gi|31794390|ref|NP_856883.1| hypothetical protein Mb3238 [Mycoba... 796 0.0 gi|121639099|ref|YP_979323.1| hypothetical protein BCG_3239 [Myc... 793 0.0 gi|240172121|ref|ZP_04750780.1| hypothetical protein MkanA1_2258... 645 0.0 gi|15827354|ref|NP_301617.1| hypothetical protein ML0810 [Mycoba... 617 8e-175 gi|183981368|ref|YP_001849659.1| hypothetical protein MMAR_1345 ... 593 1e-167 gi|118618016|ref|YP_906348.1| hypothetical protein MUL_2534 [Myc... 588 5e-166 gi|296169011|ref|ZP_06850677.1| conserved hypothetical protein [... 572 3e-161 gi|342861170|ref|ZP_08717819.1| hypothetical protein MCOL_19902 ... 552 3e-155 gi|336459519|gb|EGO38456.1| hypothetical protein MAPs_02470 [Myc... 546 3e-153 gi|254776599|ref|ZP_05218115.1| hypothetical protein MaviaA2_182... 545 4e-153 gi|41409411|ref|NP_962247.1| hypothetical protein MAP3313 [Mycob... 544 1e-152 gi|254822020|ref|ZP_05227021.1| hypothetical protein MintA_18952... 540 1e-151 gi|118462952|ref|YP_883307.1| hypothetical protein MAV_4160 [Myc... 532 4e-149 gi|333991567|ref|YP_004524181.1| hypothetical protein JDM601_292... 459 5e-127 gi|118472510|ref|YP_886295.1| hypothetical protein MSMEG_1929 [M... 436 5e-120 gi|315445552|ref|YP_004078431.1| hypothetical protein Mspyr1_400... 429 5e-118 gi|108798363|ref|YP_638560.1| hypothetical protein Mmcs_1392 [My... 426 3e-117 gi|145225255|ref|YP_001135933.1| hypothetical protein Mflv_4677 ... 425 8e-117 gi|120402789|ref|YP_952618.1| hypothetical protein Mvan_1790 [My... 424 2e-116 gi|126434047|ref|YP_001069738.1| hypothetical protein Mjls_1446 ... 421 2e-115 gi|167968330|ref|ZP_02550607.1| conserved alanine and valine ric... 405 9e-111 gi|169630613|ref|YP_001704262.1| hypothetical protein MAB_3532 [... 327 2e-87 gi|226365825|ref|YP_002783608.1| hypothetical protein ROP_64160 ... 298 8e-79 gi|325675726|ref|ZP_08155410.1| hypothetical protein HMPREF0724_... 283 5e-74 gi|312140645|ref|YP_004007981.1| hypothetical protein REQ_33050 ... 281 1e-73 gi|226305683|ref|YP_002765643.1| hypothetical protein RER_21960 ... 280 4e-73 gi|111023318|ref|YP_706290.1| hypothetical protein RHA1_ro06355 ... 269 5e-70 gi|229489582|ref|ZP_04383445.1| conserved hypothetical protein [... 264 2e-68 gi|343927605|ref|ZP_08767073.1| hypothetical protein GOALK_097_0... 229 5e-58 gi|54026547|ref|YP_120789.1| hypothetical protein nfa45740 [Noca... 222 9e-56 gi|134097655|ref|YP_001103316.1| hypothetical protein SACE_1059 ... 219 5e-55 gi|257054730|ref|YP_003132562.1| hypothetical protein Svir_06640... 212 8e-53 gi|291008800|ref|ZP_06566773.1| hypothetical protein SeryN2_3011... 207 2e-51 gi|333921426|ref|YP_004495007.1| hypothetical protein AS9A_3769 ... 206 6e-51 gi|326383297|ref|ZP_08204985.1| hypothetical protein SCNU_10184 ... 200 5e-49 gi|262203394|ref|YP_003274602.1| hypothetical protein Gbro_3516 ... 197 3e-48 gi|256374970|ref|YP_003098630.1| hypothetical protein Amir_0823 ... 196 4e-48 gi|300783034|ref|YP_003763325.1| hypothetical protein AMED_1107 ... 186 5e-45 gi|296138843|ref|YP_003646086.1| hypothetical protein Tpau_1115 ... 186 8e-45 gi|331694933|ref|YP_004331172.1| hypothetical protein Psed_1068 ... 181 3e-43 gi|324998439|ref|ZP_08119551.1| hypothetical protein PseP1_06707... 179 1e-42 gi|317507499|ref|ZP_07965224.1| hypothetical protein HMPREF9336_... 175 1e-41 gi|172040178|ref|YP_001799892.1| putative secreted protein [Cory... 175 2e-41 gi|237786052|ref|YP_002906757.1| hypothetical protein ckrop_1485... 173 4e-41 gi|337290207|ref|YP_004629228.1| hypothetical protein CULC22_005... 172 1e-40 gi|302524384|ref|ZP_07276726.1| predicted protein [Streptomyces ... 171 2e-40 gi|334696328|gb|AEG81125.1| putative secreted protein [Corynebac... 171 3e-40 gi|19551996|ref|NP_599998.1| hypothetical protein NCgl0736 [Cory... 167 4e-39 gi|344043729|gb|EGV39417.1| hypothetical protein CgS9114_13161 [... 166 7e-39 >gi|15610348|ref|NP_217728.1| hypothetical protein Rv3212 [Mycobacterium tuberculosis H37Rv] gi|15842799|ref|NP_337836.1| hypothetical protein MT3308 [Mycobacterium tuberculosis CDC1551] gi|148663073|ref|YP_001284596.1| hypothetical protein MRA_3251 [Mycobacterium tuberculosis H37Ra] 62 more sequence titles Length=407 Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/407 (100%), Positives = 407/407 (100%), Gaps = 0/407 (0%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL Sbjct 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV Sbjct 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR Sbjct 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP Sbjct 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS Sbjct 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG Sbjct 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 Query 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG Sbjct 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 >gi|31794390|ref|NP_856883.1| hypothetical protein Mb3238 [Mycobacterium bovis AF2122/97] gi|31619986|emb|CAD95330.1| CONSERVED HYPOTHETICAL ALANINE VALINE RICH PROTEIN [Mycobacterium bovis AF2122/97] Length=407 Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/407 (99%), Positives = 406/407 (99%), Gaps = 0/407 (0%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL Sbjct 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV Sbjct 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR Sbjct 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP Sbjct 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 IQRIVPEPG RPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS Sbjct 241 IQRIVPEPGARPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG Sbjct 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 Query 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG Sbjct 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 >gi|121639099|ref|YP_979323.1| hypothetical protein BCG_3239 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991591|ref|YP_002646280.1| hypothetical alanine valine rich protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121494747|emb|CAL73228.1| Conserved hypothetical alanine valine rich protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774706|dbj|BAH27512.1| hypothetical alanine valine rich protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341603138|emb|CCC65816.1| conserved hypothetical alanine valine rich protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=407 Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/407 (99%), Positives = 405/407 (99%), Gaps = 0/407 (0%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL Sbjct 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV Sbjct 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR Sbjct 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQA LRLVLLRPGKEDDEP Sbjct 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQAGLRLVLLRPGKEDDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 IQRIVPEPG RPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS Sbjct 241 IQRIVPEPGARPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG Sbjct 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 Query 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG Sbjct 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 >gi|240172121|ref|ZP_04750780.1| hypothetical protein MkanA1_22589 [Mycobacterium kansasii ATCC 12478] Length=407 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/407 (85%), Positives = 367/407 (91%), Gaps = 0/407 (0%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MVKPERRT+ DI AAA I VVVAV A+LIWWTSDARATISRPAA P P PAREVP++L Sbjct 1 MVKPERRTRGDILAAAAIVVVVAVVAALIWWTSDARATISRPAATPAPNPTPAREVPSTL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLW+A SPA+RVPV VGGTV TGDGR VDGRDPATGE+LWSYARDTDLCGVTWVY YAV Sbjct 61 KQLWSAPSPASRVPVAVGGTVVTGDGRHVDGRDPATGETLWSYARDTDLCGVTWVYRYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYR DRGCGQVSTIDGSTGRRG ARS YADPRVRL SDGTTVLSAG TRLELWRSDMVR Sbjct 121 AVYRDDRGCGQVSTIDGSTGRRGPARSSYADPRVRLSSDGTTVLSAGRTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 ML+YGE DARVKPSNRGL SGCTLESAAASS++V+VLEAC NQAD+RLVLLRPGKE+DEP Sbjct 181 MLSYGETDARVKPSNRGLHSGCTLESAAASSSSVAVLEACANQADVRLVLLRPGKEEDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 QRIVPEPG+RPGSGARVL VSQNNTAVYLP SGAQPRVDVIDETG TV+STLL KPPS Sbjct 241 EQRIVPEPGIRPGSGARVLTVSQNNTAVYLPGESGAQPRVDVIDETGTTVASTLLPKPPS 300 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 A S++G+LVTWWTGDALLVFD+G LTQRYTIAAGET APVGPGVMMAGQL+VPVTG Sbjct 301 PEATVSQSGSLVTWWTGDALLVFDSGKLTQRYTIAAGETAAPVGPGVMMAGQLIVPVTGA 360 Query 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 IGVYDPVSGANNRYIPV RPPS SAVIP V GSRVIEQRGD++VALG Sbjct 361 IGVYDPVSGANNRYIPVDRPPSGSAVIPVVVGSRVIEQRGDSVVALG 407 >gi|15827354|ref|NP_301617.1| hypothetical protein ML0810 [Mycobacterium leprae TN] gi|221229832|ref|YP_002503248.1| hypothetical protein MLBr_00810 [Mycobacterium leprae Br4923] gi|13092903|emb|CAC30320.1| putative membrane protein [Mycobacterium leprae] gi|219932939|emb|CAR70905.1| putative membrane protein [Mycobacterium leprae Br4923] Length=407 Score = 617 bits (1592), Expect = 8e-175, Method: Compositional matrix adjust. Identities = 325/407 (80%), Positives = 346/407 (86%), Gaps = 0/407 (0%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MV+PERRTK D AA TI VV+A SLIWWTSDA+AT SRPA + P P PAREVPT+ Sbjct 1 MVRPERRTKADTIAAMTITVVMAAMVSLIWWTSDAQATHSRPATIPAPNPTPAREVPTAF 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 QLW AASPAT PVVVGG V TGDG Q+DGR+P TGES WSYARD+DLCGV+WVYHYAV Sbjct 61 NQLWAAASPATTAPVVVGGAVITGDGHQIDGRNPVTGESRWSYARDSDLCGVSWVYHYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYR DRGCGQVSTIDGSTGRR AARS YADP VRL SDGT VLSAGDTRLELWRSDMVR Sbjct 121 AVYRDDRGCGQVSTIDGSTGRREAARSSYADPHVRLSSDGTAVLSAGDTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 MLAYGEIDARVKP RGL SGCTLES AASS+AV+VLEAC NQ DL+LVLLRPGKEDDEP Sbjct 181 MLAYGEIDARVKPPARGLHSGCTLESTAASSSAVAVLEACANQDDLQLVLLRPGKEDDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 Q +V EP VR GSGARVL VS +TAVYLP +G QPRVDVIDETG TV+STLL KPPS Sbjct 241 QQHLVAEPRVRSGSGARVLTVSDTHTAVYLPGEAGTQPRVDVIDETGTTVASTLLTKPPS 300 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 +SAV S+ GNLVTWWTGD L+VF+ NLT RYTIAAGETTAPVGPGVMMAGQLLVPVTG Sbjct 301 SSAVVSQAGNLVTWWTGDTLMVFNQSNLTLRYTIAAGETTAPVGPGVMMAGQLLVPVTGK 360 Query 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 IGVYD SGANNRYIPV RPPS+SAVIPAVSGS V EQRGDTLVALG Sbjct 361 IGVYDLFSGANNRYIPVRRPPSSSAVIPAVSGSTVFEQRGDTLVALG 407 >gi|183981368|ref|YP_001849659.1| hypothetical protein MMAR_1345 [Mycobacterium marinum M] gi|183174694|gb|ACC39804.1| conserved alanine and valine rich protein [Mycobacterium marinum M] Length=404 Score = 593 bits (1530), Expect = 1e-167, Method: Compositional matrix adjust. Identities = 327/407 (81%), Positives = 358/407 (88%), Gaps = 3/407 (0%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MVKPERRT+ DI AAA I VV+A+ LIWWTSDARAT+SRPAA P P+PAREVP +L Sbjct 1 MVKPERRTRGDILAAAAIVVVIALVTLLIWWTSDARATVSRPAAAPAPNPSPAREVPGTL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLWTA SPATRVPVV GGTVATG GR V+GR+P TGE+LWSY+RDTDLCGV+WVY YAV Sbjct 61 KQLWTANSPATRVPVVAGGTVATGTGRLVEGRNPTTGETLWSYSRDTDLCGVSWVYRYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYR DRGCGQVSTIDGSTGRRG ARS YADP+VRL SDGTTVLSAG TRLELWRSDMVR Sbjct 121 AVYRDDRGCGQVSTIDGSTGRRGPARSSYADPKVRLSSDGTTVLSAGSTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 ML+YGE DARVKP+NRGL SGCTLESAAASS+AVSVLEAC +QADLRLVLLRPGKE+DEP Sbjct 181 MLSYGETDARVKPANRGLHSGCTLESAAASSSAVSVLEACQDQADLRLVLLRPGKEEDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 QRIVPEPG+R GSGARVL+VSQNNTAVYLP+ QP V+VIDETG T +STLL KPPS Sbjct 241 EQRIVPEPGIRAGSGARVLIVSQNNTAVYLPS---PQPHVEVIDETGTTTASTLLPKPPS 297 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 +AV S+TGNLVTWWTGDALLVF+ G LTQRYTIAAG+T AP+GPGVMMAGQLLVPVTG Sbjct 298 PAAVVSQTGNLVTWWTGDALLVFNTGKLTQRYTIAAGDTAAPLGPGVMMAGQLLVPVTGA 357 Query 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 +GVYDPVSGA+ RYIPV R P+TSAVIP V GS VIEQRGD +VALG Sbjct 358 LGVYDPVSGASIRYIPVDRQPNTSAVIPVVVGSTVIEQRGDAVVALG 404 >gi|118618016|ref|YP_906348.1| hypothetical protein MUL_2534 [Mycobacterium ulcerans Agy99] gi|118570126|gb|ABL04877.1| conserved alanine and valine rich protein [Mycobacterium ulcerans Agy99] Length=404 Score = 588 bits (1516), Expect = 5e-166, Method: Compositional matrix adjust. Identities = 324/407 (80%), Positives = 357/407 (88%), Gaps = 3/407 (0%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MVKPERRT+ DI AAA I VV+A+ LIWWTSDARAT+SRPAA P P+PAREVP +L Sbjct 1 MVKPERRTRGDILAAAAIVVVIALVTLLIWWTSDARATVSRPAAAPAPNPSPAREVPGTL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLWTA SPATRVP+V GGTVATG GR V+GR+P TGE+LWSY+RDTDLCGV+WVY YAV Sbjct 61 KQLWTANSPATRVPMVAGGTVATGAGRLVEGRNPTTGETLWSYSRDTDLCGVSWVYRYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYR DRGCGQVSTIDGSTGRRG ARS YADP+VRL SDGTTVLSAG TRLELWRSDMVR Sbjct 121 AVYRDDRGCGQVSTIDGSTGRRGPARSSYADPKVRLSSDGTTVLSAGSTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 ML+YGE DARVK +NRGL SGCTLESAAASS+AVSVLEAC +QADLRLVLLRPGKE+DEP Sbjct 181 MLSYGETDARVKAANRGLHSGCTLESAAASSSAVSVLEACQDQADLRLVLLRPGKEEDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 QRIVPEPG+R GSGARVL+VSQNNTAVYLP+ QP V+VIDETG T +STLL KPPS Sbjct 241 EQRIVPEPGIRAGSGARVLIVSQNNTAVYLPS---PQPHVEVIDETGTTTASTLLPKPPS 297 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 +AV S+TGNLVTWWTGDALLVF+ G LTQRYTIAAG+T AP+GPGVMMAGQ+LVPVTG Sbjct 298 PAAVVSQTGNLVTWWTGDALLVFNTGKLTQRYTIAAGDTAAPLGPGVMMAGQVLVPVTGA 357 Query 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 +GVYDPVSGA+ RYIPV R P+TSAVIP V GS VIEQRGD +VALG Sbjct 358 LGVYDPVSGASIRYIPVDRQPNTSAVIPVVVGSTVIEQRGDAVVALG 404 >gi|296169011|ref|ZP_06850677.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896353|gb|EFG76009.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=404 Score = 572 bits (1475), Expect = 3e-161, Method: Compositional matrix adjust. Identities = 309/407 (76%), Positives = 346/407 (86%), Gaps = 3/407 (0%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MV+PERRT+ D+ AAA IAVVVA A+LIWWTSDARATISRPAA P P PAR+VP +L Sbjct 1 MVRPERRTRGDVLAAAAIAVVVAAVAALIWWTSDARATISRPAAEPAPNPTPARQVPATL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 QLWTAASPAT PV VGGTV TGDGR+VDGRDP +G+S WSY RD+ LCGV+WVYHYAV Sbjct 61 GQLWTAASPATTAPVTVGGTVITGDGRRVDGRDPGSGQSRWSYERDSALCGVSWVYHYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYR DRGCGQVST+DGSTGRRG ARSGYAD VRL SDGTTVLSAGDT +ELWRSDMVR Sbjct 121 AVYRDDRGCGQVSTLDGSTGRRGPARSGYADQHVRLSSDGTTVLSAGDTHVELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 M+AYGE DARVKPS RGL SGC L SAAASS+AVSVLE+C NQAD+RLVLLRPGK+DDEP Sbjct 181 MVAYGETDARVKPSARGLHSGCKLVSAAASSSAVSVLESCVNQADVRLVLLRPGKDDDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 QRIV EPG+ SGARVL V +NNTAVYLP+ +PRVDVIDETG TV+STLL KPPS Sbjct 241 QQRIVDEPGITADSGARVLAVWENNTAVYLPS---PRPRVDVIDETGTTVASTLLPKPPS 297 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 + S G+L+TWWTGD++LVF+ GNL+ RYTIAAG+ TAP+GPG MMAG+LL+PVTG Sbjct 298 SRGAVSHAGSLITWWTGDSVLVFETGNLSLRYTIAAGDKTAPLGPGAMMAGRLLIPVTGA 357 Query 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 IGVYDPVSGAN RYIPV R PS SAV+PAV+GSRV EQRGDT+VALG Sbjct 358 IGVYDPVSGANERYIPVHRAPSESAVVPAVAGSRVFEQRGDTVVALG 404 >gi|342861170|ref|ZP_08717819.1| hypothetical protein MCOL_19902 [Mycobacterium colombiense CECT 3035] gi|342131614|gb|EGT84884.1| hypothetical protein MCOL_19902 [Mycobacterium colombiense CECT 3035] Length=408 Score = 552 bits (1423), Expect = 3e-155, Method: Compositional matrix adjust. Identities = 313/411 (77%), Positives = 341/411 (83%), Gaps = 7/411 (1%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MV+PERRTK D+ AAA IAVVVA A+LIWW+SDARAT SRPAAV P PAPA++VP L Sbjct 1 MVRPERRTKGDMLAAAAIAVVVAAVAALIWWSSDARATSSRPAAVPAPNPAPAKQVPAGL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLW+AASPAT PVV GG V T GRQ+DGRDP TG+S WSYARD DLCGVTW+Y YAV Sbjct 61 KQLWSAASPATTAPVVAGGEVVTAAGRQIDGRDPGTGQSRWSYARDIDLCGVTWLYRYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 VYR DRGCGQVST+DGSTGRRG ARSGYADP+VRL SDG TVLS GDTRLELWRSDMVR Sbjct 121 GVYRDDRGCGQVSTLDGSTGRRGPARSGYADPKVRLSSDGMTVLSVGDTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 M+AYGE DARVKPS RGL SGC L SAAASS AVSVLE+C NQADLRLVLLRPGK+DDEP Sbjct 181 MVAYGETDARVKPSTRGLHSGCKLISAAASSQAVSVLESCANQADLRLVLLRPGKDDDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 Q IV EPG+ P SGARVL V++N TAVYLPA QPRVDVID+TGATVSST L KPPS Sbjct 241 QQHIVAEPGITPDSGARVLTVAENTTAVYLPA---PQPRVDVIDQTGATVSSTPLPKPPS 297 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 SAV S G+ VTWWTGD+L+VFDA L RYTIAAG+ TAP+GPGVMMAG+LLVPVTG Sbjct 298 RSAVVSHPGSQVTWWTGDSLMVFDANTLALRYTIAAGDRTAPLGPGVMMAGRLLVPVTGA 357 Query 361 IGVYDPVSGANNRYIPVTR----PPSTSAVIPAVSGSRVIEQRGDTLVALG 407 IGVYDP+SGAN RYIPV R PP+ V PAV GSRV+EQRGDTLVALG Sbjct 358 IGVYDPLSGANERYIPVDRSTSAPPAGKPVFPAVIGSRVLEQRGDTLVALG 408 >gi|336459519|gb|EGO38456.1| hypothetical protein MAPs_02470 [Mycobacterium avium subsp. paratuberculosis S397] Length=408 Score = 546 bits (1406), Expect = 3e-153, Method: Compositional matrix adjust. Identities = 312/411 (76%), Positives = 345/411 (84%), Gaps = 7/411 (1%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MV+PERRT+ DI AAATIAVVVA A+LIWWTSDARAT+SRPAAV P P+PAR+VP SL Sbjct 1 MVRPERRTRGDIVAAATIAVVVAATAALIWWTSDARATVSRPAAVPAPNPSPARQVPASL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLWTAASPAT PVVVGG VATG GR++DGRDPATG+S WSYARDTDLCG++W+Y YAV Sbjct 61 KQLWTAASPATTEPVVVGGVVATGAGRRIDGRDPATGQSRWSYARDTDLCGLSWLYRYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 VYR DRGCGQVST+DGSTGRRG ARSGYADPRVRL SDG TVLS GDTRLELWRSDMVR Sbjct 121 GVYRDDRGCGQVSTLDGSTGRRGPARSGYADPRVRLSSDGMTVLSVGDTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 ML YGE DARVKPS RGL SGC L SAAASS+AVSVLE+C NQADLRLVLLRPGK+DDEP Sbjct 181 MLTYGETDARVKPSARGLHSGCRLISAAASSSAVSVLESCANQADLRLVLLRPGKDDDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 Q IV EPG+ P SGARVL V + TAVYLPA +PRVDVIDETG TVSST L +PPS Sbjct 241 QQHIVAEPGIAPDSGARVLAVREATTAVYLPA---PRPRVDVIDETGTTVSSTPLPRPPS 297 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 SA S G+++TWWTGD+L+VFD L RYTIAAG+ TAP+GPG MMAG+LLVPVTG Sbjct 298 PSAAVSHAGSVMTWWTGDSLMVFDVNTLALRYTIAAGDKTAPLGPGAMMAGRLLVPVTGA 357 Query 361 IGVYDPVSGANNRYIPVTR----PPSTSAVIPAVSGSRVIEQRGDTLVALG 407 IGVYDP+SGA+ RYIPV R P +AV+PAVSGSRV EQRGDT+VALG Sbjct 358 IGVYDPISGASERYIPVDRATSGAPPGAAVVPAVSGSRVFEQRGDTVVALG 408 >gi|254776599|ref|ZP_05218115.1| hypothetical protein MaviaA2_18291 [Mycobacterium avium subsp. avium ATCC 25291] Length=408 Score = 545 bits (1405), Expect = 4e-153, Method: Compositional matrix adjust. Identities = 312/411 (76%), Positives = 345/411 (84%), Gaps = 7/411 (1%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MV+PERRT+ DI AAATIAVVVA A+LIWWTSDARAT+SRPAAV P P+PAR+VP SL Sbjct 1 MVRPERRTRGDIVAAATIAVVVAATAALIWWTSDARATVSRPAAVPAPNPSPARQVPASL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLWTAASPAT PVVVGG VATG GR++DGRDPATG+S WSYARDTDLCG++W+Y YAV Sbjct 61 KQLWTAASPATTEPVVVGGVVATGAGRRIDGRDPATGQSRWSYARDTDLCGLSWLYRYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 VYR DRGCGQVST+DGSTGRRG ARSGYADPRVRL SDG TVLS GDTRLELWRSDMVR Sbjct 121 GVYRDDRGCGQVSTLDGSTGRRGPARSGYADPRVRLSSDGMTVLSVGDTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 ML YGE DARVKPS RGL SGC L SAAASS+AVSVLE+C NQADLRLVLLRPGK+DDEP Sbjct 181 MLTYGETDARVKPSARGLHSGCRLISAAASSSAVSVLESCANQADLRLVLLRPGKDDDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 Q IV EPG+ P SGARVL V + TAVYLPA +PRVDVIDETG TVSST L +PPS Sbjct 241 QQHIVAEPGIAPDSGARVLAVREATTAVYLPA---PRPRVDVIDETGTTVSSTPLPRPPS 297 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 SA S G+++TWWTGD+L+VFD L RYTIAAG+ TAP+GPG MMAG+LLVPVTG Sbjct 298 PSAAVSHAGSVMTWWTGDSLMVFDVNTLALRYTIAAGDKTAPLGPGAMMAGRLLVPVTGA 357 Query 361 IGVYDPVSGANNRYIPVTR----PPSTSAVIPAVSGSRVIEQRGDTLVALG 407 IGVYDP+SGA+ RYIPV R P +AV+PAVSGSRV EQRGDT+VALG Sbjct 358 IGVYDPISGASERYIPVDRATGGAPPGAAVVPAVSGSRVFEQRGDTVVALG 408 >gi|41409411|ref|NP_962247.1| hypothetical protein MAP3313 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398242|gb|AAS05863.1| hypothetical protein MAP_3313 [Mycobacterium avium subsp. paratuberculosis K-10] Length=408 Score = 544 bits (1401), Expect = 1e-152, Method: Compositional matrix adjust. Identities = 311/411 (76%), Positives = 344/411 (84%), Gaps = 7/411 (1%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MV+PERRT+ DI AAATIAVVVA A+LIWWTSDARAT+SRPAAV P P+PAR+VP SL Sbjct 1 MVRPERRTRGDIVAAATIAVVVAATAALIWWTSDARATVSRPAAVPAPNPSPARQVPASL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLWTAASPAT PVVVGG VATG GR++DGRDPATG+S WSYARDTDLCG++W+Y YAV Sbjct 61 KQLWTAASPATTEPVVVGGVVATGAGRRIDGRDPATGQSRWSYARDTDLCGLSWLYRYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 VYR DRGCGQVST+DGSTGRRG ARSGYADPRVRL SDG TVLS GDTRLELWRSDMVR Sbjct 121 GVYRDDRGCGQVSTLDGSTGRRGPARSGYADPRVRLSSDGMTVLSVGDTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 ML Y E DARVKPS RGL SGC L SAAASS+AVSVLE+C NQADLRLVLLRPGK+DDEP Sbjct 181 MLTYSETDARVKPSARGLHSGCRLISAAASSSAVSVLESCANQADLRLVLLRPGKDDDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 Q IV EPG+ P SGARVL V + TAVYLPA +PRVDVIDETG TVSST L +PPS Sbjct 241 QQHIVAEPGIAPDSGARVLAVREATTAVYLPA---PRPRVDVIDETGTTVSSTPLPRPPS 297 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 SA S G+++TWWTGD+L+VFD L RYTIAAG+ TAP+GPG MMAG+LLVPVTG Sbjct 298 PSAAVSHAGSVMTWWTGDSLMVFDVNTLALRYTIAAGDKTAPLGPGAMMAGRLLVPVTGA 357 Query 361 IGVYDPVSGANNRYIPVTR----PPSTSAVIPAVSGSRVIEQRGDTLVALG 407 IGVYDP+SGA+ RYIPV R P +AV+PAVSGSRV EQRGDT+VALG Sbjct 358 IGVYDPISGASERYIPVDRATSGAPPGAAVVPAVSGSRVFEQRGDTVVALG 408 >gi|254822020|ref|ZP_05227021.1| hypothetical protein MintA_18952 [Mycobacterium intracellulare ATCC 13950] Length=408 Score = 540 bits (1392), Expect = 1e-151, Method: Compositional matrix adjust. Identities = 312/411 (76%), Positives = 340/411 (83%), Gaps = 7/411 (1%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MV+PERRTK DI AAATIAVVVAV A+LIWWTSDARAT SRPAAV P P+PAR+VP L Sbjct 1 MVRPERRTKRDILAAATIAVVVAVTAALIWWTSDARATSSRPAAVPAPNPSPARQVPAGL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLWTA+SPAT PVVVGG V TG G ++DGRD TG+S WSYARDT LCGV+W+Y YAV Sbjct 61 KQLWTASSPATTEPVVVGGVVVTGAGVRIDGRDAGTGQSRWSYARDTSLCGVSWLYRYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 VYR DRGCGQVST+DGSTG RG ARSGYADPRVRL SDG TVLS GDTRLELWRSDMVR Sbjct 121 GVYRDDRGCGQVSTLDGSTGHRGPARSGYADPRVRLSSDGMTVLSVGDTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 M+AYGE DARVKPS+RGL SGC L SAAASS+AVSVLE+C NQADLRLVLLRPGK+DDEP Sbjct 181 MVAYGETDARVKPSSRGLHSGCRLISAAASSSAVSVLESCANQADLRLVLLRPGKDDDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 Q +V EPG+ P SGARVL V TAVYLPA QPRVDVIDETGATV+STLL KPPS Sbjct 241 QQHVVAEPGIAPDSGARVLAVRDTTTAVYLPA---PQPRVDVIDETGATVASTLLPKPPS 297 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 SA S G+L+TWWTGD+L+VFD L RYTIAAG+ TAP+GPGVMMAG+LLVPVTG Sbjct 298 RSAAVSHAGSLMTWWTGDSLMVFDVNTLALRYTIAAGDKTAPLGPGVMMAGRLLVPVTGA 357 Query 361 IGVYDPVSGANNRYIPVTR----PPSTSAVIPAVSGSRVIEQRGDTLVALG 407 IGVYDPVSG RYIPV R PP AV+PAVSGSRV EQRGDT+VALG Sbjct 358 IGVYDPVSGTGERYIPVDRAANPPPPGRAVVPAVSGSRVFEQRGDTVVALG 408 >gi|118462952|ref|YP_883307.1| hypothetical protein MAV_4160 [Mycobacterium avium 104] gi|118164239|gb|ABK65136.1| conserved hypothetical protein [Mycobacterium avium 104] Length=396 Score = 532 bits (1371), Expect = 4e-149, Method: Compositional matrix adjust. Identities = 292/384 (77%), Positives = 322/384 (84%), Gaps = 7/384 (1%) Query 28 LIWWTSDARATISRPAAVAVPTPAPAREVPTSLKQLWTAASPATRVPVVVGGTVATGDGR 87 LIWWTSDARAT+SRPAAV P P+PAR+VP SLKQLWTAASPAT PVVVGG VATG GR Sbjct 16 LIWWTSDARATVSRPAAVPAPNPSPARQVPASLKQLWTAASPATTEPVVVGGVVATGAGR 75 Query 88 QVDGRDPATGESLWSYARDTDLCGVTWVYHYAVAVYRYDRGCGQVSTIDGSTGRRGAARS 147 ++DGRDPATG+S WSYARDTDLCG++W+Y YAV VYR DRGCGQVST+DGSTGRRG ARS Sbjct 76 RIDGRDPATGQSRWSYARDTDLCGLSWLYRYAVGVYRDDRGCGQVSTLDGSTGRRGPARS 135 Query 148 GYADPRVRLFSDGTTVLSAGDTRLELWRSDMVRMLAYGEIDARVKPSNRGLQSGCTLESA 207 GYADPRVRL SDG TVLS GDTRLELWRSDMVRML YGE DARVKPS RGL SGC L SA Sbjct 136 GYADPRVRLSSDGMTVLSVGDTRLELWRSDMVRMLTYGETDARVKPSARGLHSGCRLISA 195 Query 208 AASSAAVSVLEACTNQADLRLVLLRPGKEDDEPIQRIVPEPGVRPGSGARVLVVSQNNTA 267 AASS+AVSVLE+C NQADLRLVLLRPGK+DDEP Q IV EPG+ P SGARVL V + TA Sbjct 196 AASSSAVSVLESCANQADLRLVLLRPGKDDDEPQQHIVAEPGIAPDSGARVLAVREATTA 255 Query 268 VYLPARSGAQPRVDVIDETGATVSSTLLAKPPSTSAVASRTGNLVTWWTGDALLVFDAGN 327 VYLPA +PRVDVIDETG TVSST L +PPS SA S G+++TWWTGD+L+VFD Sbjct 256 VYLPA---PRPRVDVIDETGTTVSSTPLPRPPSPSAAVSHAGSVMTWWTGDSLMVFDVNT 312 Query 328 LTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTR----PPST 383 L RYTIAAG+ TAP+GPG MMAG+LLVPVTG IGVYDP+SGA+ RYIPV R P Sbjct 313 LALRYTIAAGDKTAPLGPGAMMAGRLLVPVTGAIGVYDPISGASERYIPVDRATGGAPPG 372 Query 384 SAVIPAVSGSRVIEQRGDTLVALG 407 +AV+PAVSGSRV EQRGDT+VALG Sbjct 373 AAVVPAVSGSRVFEQRGDTVVALG 396 >gi|333991567|ref|YP_004524181.1| hypothetical protein JDM601_2927 [Mycobacterium sp. JDM601] gi|333487535|gb|AEF36927.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=411 Score = 459 bits (1180), Expect = 5e-127, Method: Compositional matrix adjust. Identities = 263/414 (64%), Positives = 311/414 (76%), Gaps = 10/414 (2%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MV+PERRT D+ AAA IAVVV VA +IWWTSDARAT+SRPA TP A VP +L Sbjct 1 MVRPERRTAGDVLAAAVIAVVVVVAGVIIWWTSDARATVSRPALDEATTPQSAAMVPAAL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLWTAASP TR PV+V GTV TG+G Q+ GRDPATGE WSYARD DLCGV+W+Y YAV Sbjct 61 KQLWTAASPVTRAPVMVSGTVITGEGPQLTGRDPATGEERWSYARDVDLCGVSWIYRYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVY RGCGQVST+ +TGRRG AR+ YAD V + S+G++VLSAG TRLELWRSDMVR Sbjct 121 AVYPDSRGCGQVSTVTAATGRRGPARTSYADRSVNVTSEGSSVLSAGSTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 +L+YGEIDARVKP+ RG GCTL SAAA+S+AVSVLEAC Q DL+L LLR GKE+DEP Sbjct 181 VLSYGEIDARVKPTARGRGQGCTLVSAAAASSAVSVLEACPGQDDLQLTLLRAGKEEDEP 240 Query 241 IQRIVPEPGVRPGSGARVLVV----SQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLA 296 + VP+PGV SGARVL V S NTAVYLP QPRV+V+D+TG T+++T+L Sbjct 241 ETQHVPQPGVAADSGARVLTVTDADSGTNTAVYLPT---PQPRVEVVDQTGTTIATTMLP 297 Query 297 KPPSTSAVA---SRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQL 353 PS ++ A SR LV WWTGDA++VFD+G LT RYTI A P+GP MMA +L Sbjct 298 AKPSPASAALQVSRPTGLVCWWTGDAVMVFDSGTLTYRYTIPAAGAAVPLGPAAMMADRL 357 Query 354 LVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 L+PVTGG+GV++ +GA R IPV+RP AV PAVSG V+EQRGDT+VALG Sbjct 358 LIPVTGGVGVFNQRTGAAERVIPVSRPAGVRAVFPAVSGPMVLEQRGDTVVALG 411 >gi|118472510|ref|YP_886295.1| hypothetical protein MSMEG_1929 [Mycobacterium smegmatis str. MC2 155] gi|118173797|gb|ABK74693.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=405 Score = 436 bits (1120), Expect = 5e-120, Method: Compositional matrix adjust. Identities = 250/407 (62%), Positives = 298/407 (74%), Gaps = 4/407 (0%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MVKPERRT+ DI AAA I VVVAVAA LIWWTSDARAT+SRPAA VP PA EVP L Sbjct 1 MVKPERRTRGDIVAAAVIVVVVAVAAGLIWWTSDARATLSRPAAAPVPYLTPAAEVPAGL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 ++WTA SP T PVV GG V TGDGR VDGRDP +G LW+YARD DLCGVT VY YAV Sbjct 61 HEMWTAPSPKTTAPVVAGGAVVTGDGRTVDGRDPISGAVLWTYARDADLCGVTSVYSYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVY RGCGQVSTIDG TG RG AR+ +ADP V+L +DG TVLS GD+RLELWRSDMVR Sbjct 121 AVYPDVRGCGQVSTIDGRTGMRGPARTAFADPEVKLSTDGVTVLSGGDSRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 ML+YG +DAR+KP + C SAAASS+AVSV+E+C ++RL LLRP E+D P Sbjct 181 MLSYGALDARIKP-DVPASPVCRQLSAAASSSAVSVIESCPKTDEVRLTLLRPADEEDTP 239 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 R V PGV SGA+V+ VS TA+Y+P +P+VDVIDETGATV+ST+L KP + Sbjct 240 DLRYVELPGVTDESGAQVIAVSDTTTAIYVPT---PEPKVDVIDETGATVASTILPKPAA 296 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 + +R G+LVTWWTGD+++VFDA L +YT++ APVGP MAG+LLVPV G Sbjct 297 PQSTTTRAGDLVTWWTGDSVMVFDAAGLRYKYTVSPAGPHAPVGPATAMAGKLLVPVDDG 356 Query 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 V+DP +G +R+I + R PS S V+PAV+GS V+EQRG LVALG Sbjct 357 YDVFDPETGTGDRHISLPRTPSVSPVVPAVAGSIVLEQRGTELVALG 403 >gi|315445552|ref|YP_004078431.1| hypothetical protein Mspyr1_40090 [Mycobacterium sp. Spyr1] gi|315263855|gb|ADU00597.1| hypothetical protein Mspyr1_40090 [Mycobacterium sp. Spyr1] Length=390 Score = 429 bits (1102), Expect = 5e-118, Method: Compositional matrix adjust. Identities = 226/387 (59%), Positives = 280/387 (73%), Gaps = 5/387 (1%) Query 21 VVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSLKQLWTAASPATRVPVVVGGT 80 V+ + A+++WWTSDARAT S PAA +P+ PA VP SL QLWTA S T P+VVGG Sbjct 9 VIVLVAAVVWWTSDARATRSTPAAEPLPSLKPAVAVPDSLTQLWTARSGETTRPLVVGGA 68 Query 81 VATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAVAVYRYDRGCGQVSTIDGSTG 140 V TGDG+ + GR+PATG+ +WSYARD DLCGVTWVY+YAVAVY RGCGQVST+D TG Sbjct 69 VVTGDGQAMQGREPATGDVVWSYARDLDLCGVTWVYNYAVAVYPDARGCGQVSTVDAKTG 128 Query 141 RRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVRMLAYGEIDARVKPSNRGLQS 200 RRG AR+ YAD V L DG+TVLS G+TRLE+WRSDMVRML+YG +DA +KP Sbjct 129 RRGPARTSYADRHVTLSGDGSTVLSQGETRLEMWRSDMVRMLSYGALDAPIKPGVPATPL 188 Query 201 GCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEPIQRIVPEPGVRPGSGARVLV 260 C SA ASS +VSVLEAC +Q DLRL LLRP E+D P + V + GV G+GARV+ Sbjct 189 -CRFVSAGASSDSVSVLEACESQ-DLRLTLLRPSDEEDSPEAKYVQQTGVADGTGARVVA 246 Query 261 VSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPSTSAVASRTGNLVTWWTGDAL 320 VS TA+Y+P +PR+D+ID+TGATV +T++ PPS A S+ G+LVTWWTGDAL Sbjct 247 VSDTYTALYVPT---PKPRLDLIDDTGATVDTTIVDGPPSPEATMSKAGDLVTWWTGDAL 303 Query 321 LVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRP 380 +VF +L +YT+AA APVGP +MAG+LLVPVT G V+DP +G ++IPV RP Sbjct 304 MVFSGNDLRYKYTVAATGPDAPVGPATIMAGKLLVPVTTGYDVFDPETGTGEKHIPVQRP 363 Query 381 PSTSAVIPAVSGSRVIEQRGDTLVALG 407 P V+PAV+G+ V+E RGD LVALG Sbjct 364 PVDGPVVPAVAGTTVLELRGDDLVALG 390 >gi|108798363|ref|YP_638560.1| hypothetical protein Mmcs_1392 [Mycobacterium sp. MCS] gi|119867460|ref|YP_937412.1| hypothetical protein Mkms_1410 [Mycobacterium sp. KMS] gi|108768782|gb|ABG07504.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119693549|gb|ABL90622.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=403 Score = 426 bits (1096), Expect = 3e-117, Method: Compositional matrix adjust. Identities = 253/407 (63%), Positives = 305/407 (75%), Gaps = 4/407 (0%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MVKPERRT+ D+ AA IA V+AV A+L+WWTSDARATIS+PA AVP P PA +VP++L Sbjct 1 MVKPERRTRGDVMAAVAIAAVIAVIAALVWWTSDARATISQPAEQAVPDPEPAADVPSAL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 ++LW+AASP TR+PVVVGG+V TGDG V GRDPATG+++WSY+RD DLCGVT VYHYAV Sbjct 61 RELWSAASPKTRLPVVVGGSVVTGDGSTVAGRDPATGDTVWSYSRDVDLCGVTSVYHYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVY RGCGQVSTI+G TG+RG AR+G+ADP V L +DGTTVLSAG++RLELWRSDMVR Sbjct 121 AVYPDSRGCGQVSTINGRTGKRGNARTGFADPAVTLSTDGTTVLSAGESRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 ML+YG +DARVKP + C L SAAASS+AVSVLEAC + DLRL LLRP E+D P Sbjct 181 MLSYGALDARVKP-DVPAAPLCRLTSAAASSSAVSVLEACPKEPDLRLTLLRPSDEEDVP 239 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 + V V S ARV+ VS+ TAVYLP QP V+VIDETG TV+STL+ P S Sbjct 240 DIKYVELADVPADSDARVIAVSETTTAVYLPT---PQPTVNVIDETGTTVASTLMTSPAS 296 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 AVASR G+L+TWWTGD+++VFD L +YT+ + P+GP MA +LLVPVT G Sbjct 297 PDAVASRAGDLITWWTGDSVMVFDGSGLRYKYTVTPSGPSLPLGPAAEMADRLLVPVTDG 356 Query 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 V++P SG R+IP+ RPP AVIPAV G RV+E RG LV LG Sbjct 357 YDVFEPGSGTGERHIPLARPPVDGAVIPAVVGDRVVELRGGELVGLG 403 >gi|145225255|ref|YP_001135933.1| hypothetical protein Mflv_4677 [Mycobacterium gilvum PYR-GCK] gi|145217741|gb|ABP47145.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=378 Score = 425 bits (1092), Expect = 8e-117, Method: Compositional matrix adjust. Identities = 224/382 (59%), Positives = 276/382 (73%), Gaps = 5/382 (1%) Query 26 ASLIWWTSDARATISRPAAVAVPTPAPAREVPTSLKQLWTAASPATRVPVVVGGTVATGD 85 A+++WWTSDARAT S PAA +P+ PA VP SL QLW A S T P+VVGG V TGD Sbjct 2 AAVVWWTSDARATRSTPAAEPLPSLKPAVAVPDSLTQLWAARSGETTRPLVVGGAVVTGD 61 Query 86 GRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAVAVYRYDRGCGQVSTIDGSTGRRGAA 145 G+ + GR+PATG+ +WSYARD DLCGVTWVY+YAVAVY RGCGQVST+D TGRRG A Sbjct 62 GQAMQGREPATGDVVWSYARDLDLCGVTWVYNYAVAVYPDARGCGQVSTVDAKTGRRGPA 121 Query 146 RSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVRMLAYGEIDARVKPSNRGLQSGCTLE 205 R+ YAD V L DG+TVLS G+TRLE+WRSDMVRML+YG +DA +KP C Sbjct 122 RTSYADRHVTLSGDGSTVLSQGETRLEMWRSDMVRMLSYGALDAPIKPGVPATPL-CRFV 180 Query 206 SAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEPIQRIVPEPGVRPGSGARVLVVSQNN 265 SA ASS +VSVLEAC +Q DLRL LLRP E+D P + V + GV G+GARV+ VS Sbjct 181 SAGASSDSVSVLEACESQ-DLRLTLLRPSDEEDSPEAKYVQQTGVADGTGARVVAVSDTY 239 Query 266 TAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPSTSAVASRTGNLVTWWTGDALLVFDA 325 TA+Y+P +PR+D+ID+TGATV +T++ PPS A S+ G+LVTWWTGDAL+VF Sbjct 240 TALYVPT---PKPRLDLIDDTGATVDTTIVDGPPSPEATMSKAGDLVTWWTGDALMVFSG 296 Query 326 GNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSA 385 +L +YT+AA APVGP +MAG+LLVPVT G V+DP +G ++IPV RPP Sbjct 297 NDLRYKYTVAATGPDAPVGPATIMAGKLLVPVTTGYDVFDPETGTGEKHIPVQRPPVDGP 356 Query 386 VIPAVSGSRVIEQRGDTLVALG 407 V+PAV+G+ V+E RGD LVALG Sbjct 357 VVPAVAGTTVLELRGDDLVALG 378 >gi|120402789|ref|YP_952618.1| hypothetical protein Mvan_1790 [Mycobacterium vanbaalenii PYR-1] gi|119955607|gb|ABM12612.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=403 Score = 424 bits (1089), Expect = 2e-116, Method: Compositional matrix adjust. Identities = 248/409 (61%), Positives = 307/409 (76%), Gaps = 8/409 (1%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MVKPERRT+ D+ AAA IA VVA+ A+++WWTSDARAT SRPAA VP+ PA VP SL Sbjct 1 MVKPERRTRADLVAAAAIAGVVALVAAVVWWTSDARATESRPAAEPVPSLKPAAAVPDSL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 +Q WT S T +PVVVGG V TGDG+ ++GRDPATG +LW YARD +LCGVTWVY YAV Sbjct 61 EQRWTTGSAKTTLPVVVGGAVVTGDGQAMEGRDPATGATLWRYARDLELCGVTWVYSYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVY RGCGQVST+D TG RG +R+ YAD V L +DGTTVLSAG TRLE+WRSDMVR Sbjct 121 AVYPDVRGCGQVSTVDAKTGLRGPSRTSYADREVTLSADGTTVLSAGATRLEMWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSG--CTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDD 238 ML+YG +DA +KP G+ + C SA AS+++VSVLE+C +QADLRL LLRP E+D Sbjct 181 MLSYGALDAPIKP---GVPASPLCRFVSAGASASSVSVLESCESQADLRLTLLRPSDEED 237 Query 239 EPIQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKP 298 P + V + GV GSGARV+ V+ + TA+Y+P +PR+D+ID+TGA + ST++ P Sbjct 238 TPELKYVQQKGVADGSGARVVAVTDSATALYVPT---PKPRIDIIDDTGAVIDSTVVPAP 294 Query 299 PSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVT 358 PS A ASR G+LVTWWTGDAL+VF A NL +YT+AA + APVGP +MAGQLLVPVT Sbjct 295 PSPDATASRVGDLVTWWTGDALMVFSANNLQYKYTVAASGSDAPVGPATIMAGQLLVPVT 354 Query 359 GGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 G V+DP++G +++IPV RP V+PAV+GS V+EQRGD LVALG Sbjct 355 TGYDVFDPMTGTGDKHIPVQRPQVAGPVVPAVAGSTVLEQRGDELVALG 403 >gi|126434047|ref|YP_001069738.1| hypothetical protein Mjls_1446 [Mycobacterium sp. JLS] gi|126233847|gb|ABN97247.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=403 Score = 421 bits (1081), Expect = 2e-115, Method: Compositional matrix adjust. Identities = 252/407 (62%), Positives = 305/407 (75%), Gaps = 4/407 (0%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MVKPERRT+ D+ AA IA V+AV A+L+WWTSDARATIS+PA AVP P PA +VP++L Sbjct 1 MVKPERRTRGDVMAAVAIAAVIAVTAALVWWTSDARATISQPAEQAVPDPEPAADVPSAL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 ++LW+AASP TR+PVVVGG+V TGDG V GRDPATG+++WSY+RD DLCGVT VYHYAV Sbjct 61 RELWSAASPKTRLPVVVGGSVVTGDGSTVAGRDPATGDTVWSYSRDVDLCGVTSVYHYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVY RGCGQV+TI+G TG+RG AR+G+ADP V L +DGTTVLSAG++RLELWRSDMVR Sbjct 121 AVYPDSRGCGQVTTINGRTGKRGNARTGFADPAVTLSTDGTTVLSAGESRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 ML+YG +DARVKP + C L SAAASS+AVSVLEAC + DLRL LLRP E+D P Sbjct 181 MLSYGALDARVKP-DVPAAPLCRLTSAAASSSAVSVLEACPKEPDLRLTLLRPSDEEDVP 239 Query 241 IQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPS 300 + V V S ARV+ VS+ TAVYLP QP V+VIDETG TV+STL+ P S Sbjct 240 DIKYVELADVLADSDARVIAVSETTTAVYLPT---PQPTVNVIDETGTTVASTLMTSPAS 296 Query 301 TSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGG 360 AVASR G+L+TWWTGD+++VFD L +YT+ + P+GP MA +LLVPVT G Sbjct 297 PDAVASRAGDLITWWTGDSVMVFDGSGLRYKYTVTPSGPSLPLGPAAEMADRLLVPVTDG 356 Query 361 IGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 V++P SG R+IP+ RPP AVIPAV G RV+E RG LV LG Sbjct 357 YDVFEPGSGTGERHIPLARPPVDGAVIPAVVGDRVVELRGGELVGLG 403 >gi|167968330|ref|ZP_02550607.1| conserved alanine and valine rich protein [Mycobacterium tuberculosis H37Ra] Length=364 Score = 405 bits (1040), Expect = 9e-111, Method: Compositional matrix adjust. Identities = 229/235 (98%), Positives = 231/235 (99%), Gaps = 0/235 (0%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL Sbjct 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV Sbjct 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR Sbjct 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGK 235 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLR + PG+ Sbjct 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRACAVTPGQ 235 >gi|169630613|ref|YP_001704262.1| hypothetical protein MAB_3532 [Mycobacterium abscessus ATCC 19977] gi|169242580|emb|CAM63608.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=406 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 199/414 (49%), Positives = 260/414 (63%), Gaps = 15/414 (3%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 M+ PERRT+ DI AAA IAVVVAV + IWWTSDARAT+SRPAA + P A VP S+ Sbjct 1 MIAPERRTRADIIAAAVIAVVVAVTGTTIWWTSDARATVSRPAAGDIKRPMSATRVPDSV 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYA-RDTDLCGVTWVYHYA 119 ++LW+ AS AT+ PV+ G V + DG V DPATG LWSYA R+ DLCG A Sbjct 61 RELWSTASAATKGPVIASGAVVSADGHDVVAHDPATGAQLWSYARRNLDLCGAIGFIDDA 120 Query 120 VAVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMV 179 VAVYR RGCGQV+ IDG TGRRGA RS D +V L +DGT VL+ G TRLELWRSDMV Sbjct 121 VAVYRDARGCGQVTMIDGQTGRRGALRSSANDSKVSLSTDGTYVLALGSTRLELWRSDMV 180 Query 180 RMLAYGEIDARVKPSNRGLQS--GCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKED 237 R L YG + V P N Q CTL+S A ++ ++VLE C LRL L +P +D Sbjct 181 RTLEYGRV---VAPLNANSQPRVDCTLKSGAVGASVLAVLETCPQDPTLRLTLQKPTPKD 237 Query 238 DEPIQRIVPE--PGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLL 295 ++ + + PGV GS A+VL V+ +AVYLP G + + V D+ G V +T+L Sbjct 238 NDKPEELYSAVLPGVERGSAAKVLAVADTRSAVYLP---GTRNELVVFDDRGMRVGATVL 294 Query 296 AKPPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLV 355 + + A++ G+++TWWTG +LV A +L+ R+ + TT P+GPG MAG+LL+ Sbjct 295 PGEIAQTNAAAQAGDVITWWTGSQVLVLSASDLSYRFVLPT--TTKPLGPGTNMAGELLI 352 Query 356 PVTGGIGVYDPVSGANNRYIPVTRPPS--TSAVIPAVSGSRVIEQRGDTLVALG 407 PV GGI V++ +G + I V R + S VI AV G+ ++EQRG + ALG Sbjct 353 PVEGGIDVFNMTTGEFRKSIVVQRNTADEKSPVISAVVGNTLVEQRGSRIFALG 406 >gi|226365825|ref|YP_002783608.1| hypothetical protein ROP_64160 [Rhodococcus opacus B4] gi|226244315|dbj|BAH54663.1| hypothetical protein [Rhodococcus opacus B4] Length=404 Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 192/409 (47%), Positives = 244/409 (60%), Gaps = 9/409 (2%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 M+ PERR++ D+ AA IAV V VA +++W+ SDAR T S AA P A VP +L Sbjct 1 MLAPERRSRADLVVAAGIAVAVVVALTVVWFRSDARGTTSITAAEPPPALVTALTVPETL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 +W +AS AT P+VVGG V T +G V GRD +G LW YARD DLCGVT + V Sbjct 61 SPIWDSASSATTAPLVVGGAVVTAEGGDVVGRDRMSGTELWRYARDLDLCGVTASWEKVV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYR DRGC QV+ +DG TG R A R+ ADP V L +DGT V S GD RLELWRSD+VR Sbjct 121 AVYRDDRGCSQVTELDGGTGERLAQRNSDADPGVTLTADGTYVASLGDRRLELWRSDLVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 + YG +DA V P + +SGCTL +SS+ +SVLE C + RL +L P +D++ Sbjct 181 TVEYGRVDAPVNPKKQP-RSGCTLIDVGSSSSKLSVLERCPGEVADRLTVLNPSPKDNQE 239 Query 241 IQRIVPE--PGVRPG-SGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAK 297 + GV G GAR+L VS + TAVYLPA PR+ + D TG VS LA Sbjct 240 PEEYGSSVLAGVDAGVEGARILGVSGDTTAVYLPAGRTTGPRIGLFDGTGNAVSEYALAL 299 Query 298 PPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPV 357 V S + ++VTWWTG ++ A +L R+T +GPG +MAG LLVPV Sbjct 300 RVGPDPVTSASSSVVTWWTGSDVVSLGASDLVPRWTFPGA-----LGPGAVMAGNLLVPV 354 Query 358 TGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVAL 406 GI V D +GA R IPV R T + V+G V+EQRGD++VAL Sbjct 355 ASGIAVLDLPTGALLRTIPVARDSVTGPITTTVAGDVVLEQRGDSVVAL 403 >gi|325675726|ref|ZP_08155410.1| hypothetical protein HMPREF0724_13192 [Rhodococcus equi ATCC 33707] gi|325553697|gb|EGD23375.1| hypothetical protein HMPREF0724_13192 [Rhodococcus equi ATCC 33707] Length=404 Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 188/412 (46%), Positives = 244/412 (60%), Gaps = 15/412 (3%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPA---AVAVPTPAPAREVP 57 M+ PERRT+ D+A AATIA+VVAVAA++IW SDAR T S A A AV TP P Sbjct 1 MLAPERRTRLDVAVAATIAIVVAVAAAVIWIRSDARGTTSVTADAPASAVDTPL---SPP 57 Query 58 TSLKQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYH 117 SL ++W AASP T P+V GTVAT DG V GRDP TG W Y RD LCG ++ Sbjct 58 ASLTEIWRAASPETAAPIVADGTVATADGGTVLGRDPVTGTERWRYQRDMPLCGAIGAWN 117 Query 118 YAVAVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSD 177 VAVYR RGC QV+ +DG+TG+R A RS AD V L DGT V+S G R+ELWRSD Sbjct 118 TVVAVYRDQRGCSQVTQLDGATGQREAQRSSDADDTVTLSYDGTYVVSRGSERMELWRSD 177 Query 178 MVRMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKED 237 +VR L +G +DA + P + + C+L+SAAA V+VL C +A R+ +L +D Sbjct 178 LVRTLEFGRVDAPINPGKQ-PRPDCSLKSAAAGGTRVTVLMNCPGEAGDRISVLDAAPKD 236 Query 238 DEPIQRIVPEPGVRPG---SGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTL 294 ++ Q PG SGAR++ S + TAVYLPA ++ R+ V+D G ++S Sbjct 237 NQEPQEAGSTLLTGPGADTSGARLIAASGDRTAVYLPAGPISEARIAVVDGEGTEIASHP 296 Query 295 LAKPPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLL 354 P + A A+R G++ TWWTG L+ L ++T+ T +GPG +MAG LL Sbjct 297 ATTPVTDGATAARNGSVFTWWTGTELIALSTSELAPKWTM-----TGALGPGAIMAGSLL 351 Query 355 VPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVAL 406 VPV G I V DP +G IPVTR + +V G V+EQRGD +VAL Sbjct 352 VPVPGAIAVLDPATGTERARIPVTRDSDAGPIATSVLGDIVLEQRGDEVVAL 403 >gi|312140645|ref|YP_004007981.1| hypothetical protein REQ_33050 [Rhodococcus equi 103S] gi|311889984|emb|CBH49302.1| putative secreted protein [Rhodococcus equi 103S] Length=404 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 187/412 (46%), Positives = 244/412 (60%), Gaps = 15/412 (3%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPA---AVAVPTPAPAREVP 57 M+ PERRT+ D+A AATIA+VVAVAA++IW SDAR T S A A AV TP P Sbjct 1 MLAPERRTRLDVAVAATIAIVVAVAAAVIWIRSDARGTTSVTADAPASAVDTPL---SPP 57 Query 58 TSLKQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYH 117 SL ++W AASP + P+V GTVAT DG V GRDP TG W Y RD LCG ++ Sbjct 58 ASLTEIWRAASPESAAPIVADGTVATADGGTVLGRDPVTGTERWRYQRDMPLCGAIGAWN 117 Query 118 YAVAVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSD 177 VAVYR RGC QV+ +DG+TG+R A RS AD V L DGT V+S G R+ELWRSD Sbjct 118 TVVAVYRDQRGCSQVTQLDGATGQREAQRSSDADDTVTLSYDGTYVVSRGSERMELWRSD 177 Query 178 MVRMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKED 237 +VR L +G +DA + P + + C+L+SAAA V+VL C +A R+ +L +D Sbjct 178 LVRTLEFGRVDAPINPGKQ-PRPDCSLKSAAAGGTRVTVLMNCPGEAGDRISVLDAAPKD 236 Query 238 DEPIQRIVPEPGVRPG---SGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTL 294 ++ Q PG SGAR++ S + TAVYLPA ++ R+ V+D G ++S Sbjct 237 NQEPQEAGSTLLTGPGADTSGARLIAASGDRTAVYLPAGPISEARIAVVDGEGTEIASHP 296 Query 295 LAKPPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLL 354 P + A A+R G++ TWWTG L+ L ++T+ T +GPG +MAG LL Sbjct 297 ATTPVTDGATAARNGSVFTWWTGTELIALSTSELAPKWTM-----TGALGPGAIMAGSLL 351 Query 355 VPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVAL 406 VPV G I V DP +G IPVTR + +V G V+EQRGD +VAL Sbjct 352 VPVPGAIAVLDPATGTERARIPVTRDSDAGPIATSVLGDIVLEQRGDEVVAL 403 >gi|226305683|ref|YP_002765643.1| hypothetical protein RER_21960 [Rhodococcus erythropolis PR4] gi|226184800|dbj|BAH32904.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=400 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 165/407 (41%), Positives = 231/407 (57%), Gaps = 9/407 (2%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 M+ PERRT++D+ A IA+ V VA +++W SDAR T S A +P + + +P L Sbjct 1 MLAPERRTRSDVIGALAIALAVIVAVTVVWLRSDARGTTSVTAESPLPPLSTSVLLPDVL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 KQ W + S + P+ VG V T DG V GRDPATGE +W YAR+ LCG + V Sbjct 61 KQTWESPSADSTAPITVGNAVVTADGSDVIGRDPATGEEVWRYARNIPLCGAIGSWDRVV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 +VY+ +RGC QV+++ TG R R+ AD V L +DGT ++S G R+ELWRSD+VR Sbjct 121 SVYQDNRGCSQVTSLVADTGARKDQRNSDADSAVTLSADGTYLISRGSERMELWRSDLVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKED-DE 239 L YG +DA+V P N+ ++GCTL AA+S+ VSVLE C +A RL ++ P +D E Sbjct 181 TLEYGRVDAKVNP-NKQPRTGCTLLDAASSANRVSVLERCPGEASNRLTVMNPAPKDAQE 239 Query 240 PIQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPP 299 P + + GAR+L V+ TAVYLPA +G R+ + D TG + + Sbjct 240 PEE--YGSSILLDSEGARLLAVAGEKTAVYLPAANGTASRITIFDGTGNPIVDYPIEGAV 297 Query 300 STSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTG 359 + A +TWWTG + +L + + GPG M+AGQ+L+PV G Sbjct 298 TEGARTHADKASITWWTGSQTVNLRLSDLAPTWIV-----NGTSGPGSMVAGQMLIPVPG 352 Query 360 GIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVAL 406 GI P GA R I V R +T+ ++ A +G ++EQRGDTL AL Sbjct 353 GIAAVSPSDGAVQRMIAVDRGETTTPIVLASAGETILEQRGDTLFAL 399 >gi|111023318|ref|YP_706290.1| hypothetical protein RHA1_ro06355 [Rhodococcus jostii RHA1] gi|110822848|gb|ABG98132.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=404 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 188/409 (46%), Positives = 240/409 (59%), Gaps = 9/409 (2%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 M+ PERR++ D AA IAV V VA +++W+ SDAR T S AA P A VP +L Sbjct 1 MLAPERRSRADHVVAAGIAVAVVVALTVVWFRSDARGTTSVTAAEPPPALVTALMVPETL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 + +W +AS AT P+VVGG V T DG V GRD +G LW Y RD DLCGVT + V Sbjct 61 RPIWDSASSATSAPLVVGGAVVTADGGDVVGRDRMSGTELWRYERDLDLCGVTASWGKVV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYR DRGC QV+ +DG TG R A RS AD V L +DGT V S GD RLELWRSD+VR Sbjct 121 AVYRDDRGCSQVTELDGGTGERLAQRSSDADSDVTLKADGTYVASLGDRRLELWRSDLVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 + YG +DA V P + +SGCTL +SS+ +SVLE C + RL ++ P +D++ Sbjct 181 TVEYGRVDAPVNPRKQ-PRSGCTLIDVGSSSSRLSVLERCPGEVADRLTVMNPSPKDNQE 239 Query 241 IQRIVPE--PGVRPG-SGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAK 297 + GV G GAR+L VS TAVYLPA PR+ + D TG VS L Sbjct 240 PEEYGSSVLAGVDAGVEGARILGVSGETTAVYLPAGPSHGPRIGLFDGTGNAVSEYALTL 299 Query 298 PPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPV 357 + V S + ++VTWWTG ++ A +L + +GPG +MAG LLVPV Sbjct 300 GVGPNPVTSTSSSVVTWWTGSDVVSLGASDLAPHWIFPGA-----LGPGAVMAGNLLVPV 354 Query 358 TGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVAL 406 GI V D +GA R IPVTR + ++ V+G V+EQRGD +VAL Sbjct 355 ESGIAVLDLSTGALLRTIPVTRDAAAGPILTTVAGDVVLEQRGDAVVAL 403 >gi|229489582|ref|ZP_04383445.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229323679|gb|EEN89437.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=389 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 160/396 (41%), Positives = 222/396 (57%), Gaps = 15/396 (3%) Query 15 AATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSLKQLWTAASPATRVP 74 A IA+ V VA +++W SDAR T S A +P + + +P LKQ W + S + P Sbjct 4 ALAIALAVIVAVTVVWLRSDARGTTSVTAESPLPPLSTSVLLPDILKQTWESPSADSTAP 63 Query 75 VVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAVAVYRYDRGCGQVST 134 + VG V T DG +V GRDPATGE +W YAR+ LCG + V+VY+ DRGC QV++ Sbjct 64 ITVGNAVVTADGSEVIGRDPATGEEVWRYARNIPLCGAIGSWDRVVSVYQDDRGCSQVTS 123 Query 135 IDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVRMLAYGEIDARVKPS 194 + TG R R+ AD V L +DGT ++S G R+ELWRSD+VR L YG +DA+V P Sbjct 124 LVADTGARKDQRNSDADSAVSLSADGTYLISRGSERMELWRSDLVRTLEYGRVDAKVNP- 182 Query 195 NRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKED-DEPIQRIVPEPG---V 250 N+ ++GCTL AA+S+ VSVLE C +A RL ++ P +D EP E G + Sbjct 183 NKQPRTGCTLLDAASSANRVSVLERCPGEASNRLTVMNPAPKDAQEP-----EEYGSAIL 237 Query 251 RPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPSTSAVASRTGN 310 GAR+L V+ TAVYLPA +G R+ + D +G + + + A Sbjct 238 LDSEGARLLAVAGEKTAVYLPAANGTVSRITIFDGSGNPIVDYPIEGTVTEGARTHADKA 297 Query 311 LVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGGIGVYDPVSGA 370 +TWWTG + +L + + GPG M+AGQ+L+PV GGI P GA Sbjct 298 SITWWTGSQTVNLRLSDLAPTWIV-----NGTSGPGSMVAGQMLIPVPGGIAAVSPSDGA 352 Query 371 NNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVAL 406 R I V R +T+ ++ A +G ++EQRGDTL AL Sbjct 353 VQRMIAVDRGETTTPIVLASAGETILEQRGDTLFAL 388 >gi|343927605|ref|ZP_08767073.1| hypothetical protein GOALK_097_00250 [Gordonia alkanivorans NBRC 16433] gi|343762246|dbj|GAA13999.1| hypothetical protein GOALK_097_00250 [Gordonia alkanivorans NBRC 16433] Length=424 Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 163/425 (39%), Positives = 217/425 (52%), Gaps = 25/425 (5%) Query 2 VKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSLK 61 VKPERR D+A ATI V+VAVA + W S R T S A P VP + Sbjct 4 VKPERRRPIDLAITATIIVLVAVAGLIAWLVSPVRGTTSVQAQSTPPEVEQPAAVPDAFA 63 Query 62 QLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVY----H 117 W AAS AT VP + V TGDG V GRDPA+G+ LWSY RD DLC V + Sbjct 64 PRWQAASDATVVPAIADSVVVTGDGGTVVGRDPASGDELWSYRRDLDLCVVDTAWTASTD 123 Query 118 YAVAVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSD 177 A+AVYR RGC +V+ +D TG R +R+ AD +RL SD V++ G RLE W S+ Sbjct 124 LALAVYRNSRGCSEVTALDAKTGARKGSRTSDADDELRLVSDYGYVVAQGSGRLETWGSN 183 Query 178 MVRMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKED 237 +VR + YG ++A V+P + + C + S+A + +SV+E C + RL +L +D Sbjct 184 LVRGIEYGRVEAPVRPEDEAKRKDCVIYSSAITGDRLSVVERCADDPGYRLTVLGALLDD 243 Query 238 DEPIQRIVPE--PGVRPGSGARVLVVSQNNTAVYLPARSGAQ---------PRVDVIDET 286 DE +++ G G V+ +S AVY S A+ P + D Sbjct 244 DERVEQYGSTLITGDVSGPPPVVIAMSSTGIAVYDGGASPAEPPALGGDSGPSIRRFDSE 303 Query 287 GATVSSTLLAK---PPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPV 343 G S +A PP S G +VT+WTG A +V DA +L Y + A + Sbjct 304 GVATGSNTVAGDAIPPKDSVPLGGDG-VVTYWTGKATVVLDAQSLKPIYQVP-----ATL 357 Query 344 GPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPA-VSGSRVIEQRGDT 402 GPG +MAGQLL+P GI V D G R IP+TR + V+ V G V+EQRG T Sbjct 358 GPGEVMAGQLLLPSASGISVRDVAGGREIRSIPLTRSTAPDGVVSLRVIGEMVVEQRGTT 417 Query 403 LVALG 407 + A G Sbjct 418 VEAFG 422 >gi|54026547|ref|YP_120789.1| hypothetical protein nfa45740 [Nocardia farcinica IFM 10152] gi|54018055|dbj|BAD59425.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=409 Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 177/420 (43%), Positives = 231/420 (55%), Gaps = 24/420 (5%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 M+ PERRT+ DI AA IAV VA+A ++W DA T S A+ TP A ++P +L Sbjct 1 MLAPERRTRADIIAAVAIAVAVALAGVVVWARGDATGTESVTASQPATTPPAAEQLPAAL 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 ++LW A AT +V GGTV T V GRDPATG +W Y RD LCGV + V Sbjct 61 RELWHAPDDATGRALVAGGTVVTAADGTVTGRDPATGAEVWRYRRDMPLCGVESQFGMVV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYR RGC Q + + G +G R ARS Y D VRL DGT VL+ GD RLE+WRSD+VR Sbjct 121 AVYRDQRGCSQATMLAGDSGARRTARSSYMDDSVRLSVDGTYVLAQGDRRLEVWRSDLVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 L YG +DA V + + C+L SAA+SS+ ++VLE C A RL +L P +D+ Sbjct 181 TLEYGYVDAPVNVKTQP-RKDCSLLSAASSSSRLAVLERCPEDAGARLTVLNPAPKDN-- 237 Query 241 IQRIVPEP-GVRPGSGA-------RVLVVSQNNTAVYLP-ARSGAQ---PRVDVIDETGA 288 VPE G R +GA RV+ VS +Y P A GA PR+ + D +G Sbjct 238 ---TVPEEYGSRVLTGADADAPGTRVIAVSDTKIVLYQPGATLGADTVPPRLSIFDGSGN 294 Query 289 TVSSTLLAKPPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVM 348 + L+ P S A A R G+ +TG +L AG+L +T+ +G Sbjct 295 PLLVHQLSAPLSEHAQAVRIGSAYLVFTGTEVLALQAGSLQPMWTVPGA-----LGTPAS 349 Query 349 MAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPP-STSAVIPAVSGSRVIEQRGDTLVALG 407 MAG+LL+PV I DP +GA +PV RP S + AV G+ V+EQRG T+ ALG Sbjct 350 MAGRLLIPVADAIVAVDPGTGAELARLPVERPGYDNSPISLAVLGTTVLEQRGTTMHALG 409 >gi|134097655|ref|YP_001103316.1| hypothetical protein SACE_1059 [Saccharopolyspora erythraea NRRL 2338] gi|133910278|emb|CAM00391.1| conserved hypothetical alanine valine rich protein [Saccharopolyspora erythraea NRRL 2338] Length=403 Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 171/413 (42%), Positives = 224/413 (55%), Gaps = 18/413 (4%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPT-PAPAR-EVPT 58 MV+PERRTK D+AA IAV V A+ ++W SDARATIS PAA + P P P VP Sbjct 1 MVRPERRTKADLAAVVLIAVAVLAASVVVWAGSDARATISEPAAQSAPDLPDPESVRVPE 60 Query 59 SLKQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHY 118 SL++ W SPAT VPVV G V T G +V GRDPATG+ W YARD LC V + Sbjct 61 SLREAWREPSPATPVPVVAGPAVVTAGGNEVVGRDPATGQVRWRYARDIPLCTVGESWKR 120 Query 119 AVAVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDM 178 A+AVYR D C +V+++ GS G RG R+G A+ RL SDGT V ++G +E WRSD+ Sbjct 121 AIAVYRKDHNCSEVTSLRGSNGVRGPQRNGDAEFGTRLLSDGTYVTASGRRAVESWRSDL 180 Query 179 VRMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDD 238 VR YG A P N + C S A ++E C + R+ LL+ EDD Sbjct 181 VRTQQYGIPPAMKNPDNNLKRPDCQYGSVAVGDQRFGLVEECPGEPGGRITLLKTKPEDD 240 Query 239 EPIQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKP 298 E + + P GA V+ VS+++ AV P RS ++ V D A V S + Sbjct 241 EKPEELFSTGLGLP--GASVVAVSKDHAAVLAPDRS----QLLVYDGNAAVVGSFPVRIG 294 Query 299 PSTSAVASRT-----GNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQL 353 P + SR V W+TG + +LT +T A +T +GPG ++ G+L Sbjct 295 PRDTTANSRIEATTRDGQVYWFTGTDTVALHPDDLTPLWT--APDT---LGPGTVVGGKL 349 Query 354 LVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVAL 406 LVPV G+ V DP +GA R IPV R V +G ++EQRG+TLVAL Sbjct 350 LVPVRDGLAVLDPATGARERVIPVDRQGYAGPVGLDSAGDVLVEQRGETLVAL 402 >gi|257054730|ref|YP_003132562.1| hypothetical protein Svir_06640 [Saccharomonospora viridis DSM 43017] gi|256584602|gb|ACU95735.1| hypothetical protein Svir_06640 [Saccharomonospora viridis DSM 43017] Length=451 Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 149/389 (39%), Positives = 201/389 (52%), Gaps = 28/389 (7%) Query 30 WWTSDARATISRPAAVAVPTPAPAREVPTSLKQLWTAASPATRVPVVVGGTVATGDGRQV 89 W SD+RAT R A+V P P VP SL + W A S AT PV GG V T V Sbjct 78 WLFSDSRATEHRTASVPPPRLDPPAAVPGSLAERWRAPSEATPEPVAEGGFVITASAGTV 137 Query 90 DGRDPATGESLWSYARDTDLCGVTWVYHYAVAVYRYDRGCGQVSTIDGSTGRRGAARSGY 149 GRDP TGE WSY+RD +LC V + AVAVYR D GC +V+ +D TGRR A R+G Sbjct 138 AGRDPLTGEIRWSYSRDLELCTVAGAWSKAVAVYRKDLGCSEVTQLDPGTGRRTAQRNGD 197 Query 150 ADPRVRLFSDGTTVLSAGDTRLELWRSDMVRMLAYGEIDARVKPSNRGLQSGCTLESAAA 209 A+ RL D V + G+ L WRSD+V+ + YG + A P R +SGC + +A Sbjct 198 AEAPTRLVVDDAHVTTTGERLLNTWRSDLVQTMEYGRVPAPENP-QRQPRSGCRYSNVSA 256 Query 210 SSAAVSVLEACTNQADLRLVLLR-PGKEDDEPIQ---RIVPEPGVRPGSGARVLVVSQNN 265 + V V+E C + RL +L+ G+E DEP Q ++ EP A+++ +S+ Sbjct 257 GADKVGVIEHCPKEVGARLTVLKAAGEESDEPEQVFSTLLAEP------TAQLVAMSEER 310 Query 266 TAVYLPARSGAQPRVDVIDETGATVSSTLLAKPPSTSAVASRTG--------NLVTWWTG 317 AV LP Q R+ + D G SS +A P + A +G V W+TG Sbjct 311 VAVALP----EQRRLLLFDYEGEQRSSHDIAVPTAELATVPDSGVVPVSSGRENVYWFTG 366 Query 318 DALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPV 377 + AG L R+ E T +GPG + AG+ +VP+ GG+ V D +GA R + V Sbjct 367 SHTVALSAGELRPRWI---AENT--LGPGTVFAGEYVVPIPGGLAVLDERTGATTRTVAV 421 Query 378 TRPPSTSAVIPAVSGSRVIEQRGDTLVAL 406 R ++ G +IEQRG TLVAL Sbjct 422 DRRGHDGSIELEAIGPVLIEQRGRTLVAL 450 >gi|291008800|ref|ZP_06566773.1| hypothetical protein SeryN2_30118 [Saccharopolyspora erythraea NRRL 2338] Length=388 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 154/381 (41%), Positives = 202/381 (54%), Gaps = 18/381 (4%) Query 33 SDARATISRPAAVAVPT-PAPAR-EVPTSLKQLWTAASPATRVPVVVGGTVATGDGRQVD 90 SDARATIS PAA + P P P VP SL++ W SPAT VPVV G V T G +V Sbjct 18 SDARATISEPAAQSAPDLPDPESVRVPESLREAWREPSPATPVPVVAGPAVVTAGGNEVV 77 Query 91 GRDPATGESLWSYARDTDLCGVTWVYHYAVAVYRYDRGCGQVSTIDGSTGRRGAARSGYA 150 GRDPATG+ W YARD LC V + A+AVYR D C +V+++ GS G RG R+G A Sbjct 78 GRDPATGQVRWRYARDIPLCTVGESWKRAIAVYRKDHNCSEVTSLRGSNGVRGPQRNGDA 137 Query 151 DPRVRLFSDGTTVLSAGDTRLELWRSDMVRMLAYGEIDARVKPSNRGLQSGCTLESAAAS 210 + RL SDGT V ++G +E WRSD+VR YG A P N + C S A Sbjct 138 EFGTRLLSDGTYVTASGRRAVESWRSDLVRTQQYGIPPAMKNPDNNLKRPDCQYGSVAVG 197 Query 211 SAAVSVLEACTNQADLRLVLLRPGKEDDEPIQRIVPEPGVRPGSGARVLVVSQNNTAVYL 270 ++E C + R+ LL+ EDDE + + P GA V+ VS+++ AV Sbjct 198 DQRFGLVEECPGEPGGRITLLKTKPEDDEKPEELFSTGLGLP--GASVVAVSKDHAAVLA 255 Query 271 PARSGAQPRVDVIDETGATVSSTLLAKPPSTSAVASRT-----GNLVTWWTGDALLVFDA 325 P RS ++ V D A V S + P + SR V W+TG + Sbjct 256 PDRS----QLLVYDGNAAVVGSFPVRIGPRDTTANSRIEATTRDGQVYWFTGTDTVALHP 311 Query 326 GNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSA 385 +LT +T A +T +GPG ++ G+LLVPV G+ V DP +GA R IPV R Sbjct 312 DDLTPLWT--APDT---LGPGTVVGGKLLVPVRDGLAVLDPATGARERVIPVDRQGYAGP 366 Query 386 VIPAVSGSRVIEQRGDTLVAL 406 V +G ++EQRG+TLVAL Sbjct 367 VGLDSAGDVLVEQRGETLVAL 387 >gi|333921426|ref|YP_004495007.1| hypothetical protein AS9A_3769 [Amycolicicoccus subflavus DQS3-9A1] gi|333483647|gb|AEF42207.1| hypothetical protein AS9A_3769 [Amycolicicoccus subflavus DQS3-9A1] Length=428 Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 154/443 (35%), Positives = 217/443 (49%), Gaps = 53/443 (11%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 M+ PERR++ D+ A I ++V VA IWW SD R T S PA + A PTS+ Sbjct 1 MIAPERRSRADVVATVAIIMLVVVATFTIWWRSDYRQTQSAPAERPIEAVTGALATPTSV 60 Query 61 KQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 +++W A S A+ VP+ GGTV + +V G D ATG W Y R +LC VT H V Sbjct 61 REVWRAPSEASTVPITSGGTVVSTRAGEVAGHDVATGTLRWRYERQRELCAVTGQEHQVV 120 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 AVYR RGC QV+ ++ +TG RG R+ AD V L +DG ++S G RLE+WRSD+VR Sbjct 121 AVYRTPRGCTQVTALESATGVRGEQRTSDADTSVTLTADGPHIMSQGPQRLEVWRSDLVR 180 Query 181 MLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDEP 240 L +G + A V P +R + GC + A + + V+ + C +A RLVLL D P Sbjct 181 TLEFGRVAAPVNP-DRQQRGGCDILDAHITRSRVAAVLQCPEEAGERLVLL-----DSTP 234 Query 241 IQRIVPEP-------------GVRPGS-GARVLVVSQNNTAVYLPARSGAQPRVDVIDET 286 + PE G PG+ G + +S TA+++P G V V + Sbjct 235 ERNNEPEEHGSALITTNDAGLGEIPGAEGTSLAAISAQLTAIFVP---GDTDEVAVYGQE 291 Query 287 GATVSSTLLAKPP-------------------STSAVASRTGNLVTWWTGDALLVFDAGN 327 G + LA P ST V++ T +L W+TG ++ + Sbjct 292 GTAIHRWSLADVPAAPGISDDDPPIGFIPERRSTGTVSAPT-DLAYWFTGTDVVSLSGRD 350 Query 328 LTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVI 387 + + A GP +MAGQLLVP GI V++ +GA R I + R + Sbjct 351 FRPLWRVPAA------GPPAVMAGQLLVPTAAGISVHNARTGALERTIALDRNGEDVTGL 404 Query 388 PAVSGSRVIEQRG---DTLVALG 407 AV G ++EQR T+V LG Sbjct 405 -AVLGDFILEQRNGSTGTVVVLG 426 >gi|326383297|ref|ZP_08204985.1| hypothetical protein SCNU_10184 [Gordonia neofelifaecis NRRL B-59395] gi|326198047|gb|EGD55233.1| hypothetical protein SCNU_10184 [Gordonia neofelifaecis NRRL B-59395] Length=419 Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 154/426 (37%), Positives = 212/426 (50%), Gaps = 30/426 (7%) Query 2 VKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSLK 61 +KPERRT+TD+ A IAV+V A ++WWTS AR T S AA P PA VP + Sbjct 4 IKPERRTRTDLIVTALIAVIVIAAGVVVWWTSSARRTESVTAAEPAPIQLPAENVPRGVT 63 Query 62 QLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVY----H 117 W+A S T VP + G+V TG V R PA G +LWSY RD LC + Sbjct 64 VKWSARSDVTTVPQITRGSVVTGVDGTVTARRPADGSALWSYRRDLPLCATAAAWSGGDD 123 Query 118 YAVAVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSD 177 +AVYR RGC +V+++ + G R AAR+ ADP V L +D L G TRLE W S+ Sbjct 124 DVLAVYRNARGCSEVTSLRAADGVRHAARTSDADPTVHLSADTGYALLYGPTRLETWGSN 183 Query 178 MVRMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKED 237 +VR + YG + A V P ++GC L SA + + V+++E C A RL +L Sbjct 184 LVRGIEYGRVSAPVNPDVAPDRTGCRLYSAVSGADRVAIIERCDGDAGYRLTVLSSNLTS 243 Query 238 DEPIQR----IVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATV--- 290 +E I++ ++ G RV+ + + VY G P V TG + Sbjct 244 EEKIRQWGSTLITTSAT--GPAPRVVAATDSTITVY---DGGGDPSGTVGAPTGPRIRLF 298 Query 291 ---SSTLLAKPPSTSAVASRTGN------LVTWWTGDALLVFDAGNLTQRYTIAAGETTA 341 + + P + A A + +V++WTG A +V DA N T + +A Sbjct 299 TPQAESRSEHPVAGDAQAPERSDPIVDQGVVSFWTGRATVVLDASNGTPLFQVADA---- 354 Query 342 PVGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGD 401 +GPG +M+GQLLVP+ G I V G + IPV R V V G +IEQRG Sbjct 355 -IGPGAVMSGQLLVPMPGAISVRRAYDGHDEFRIPVDRGQVVGPVSLRVLGESIIEQRGT 413 Query 402 TLVALG 407 +VALG Sbjct 414 EVVALG 419 >gi|262203394|ref|YP_003274602.1| hypothetical protein Gbro_3516 [Gordonia bronchialis DSM 43247] gi|262086741|gb|ACY22709.1| hypothetical protein Gbro_3516 [Gordonia bronchialis DSM 43247] Length=419 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 149/426 (35%), Positives = 204/426 (48%), Gaps = 34/426 (7%) Query 2 VKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSLK 61 V PERR D+ A I ++V + W S R T S A A A VP + Sbjct 4 VTPERRRPVDLIITAVIVLIVVAVGIVAWVVSPVRNTDSAQAGTPAVAVAEATTVPERMV 63 Query 62 QLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYA-- 119 W A S AT P + VATGDG V GRDP +G +W Y RD LC V + ++ Sbjct 64 SRWHARSSATDTPAIGDAVVATGDGGSVIGRDPQSGREIWGYRRDLPLCTVAAAWQHSTD 123 Query 120 --VAVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSD 177 +AVYR RGC +V+ +DG +GRR AARS ADP + L SD V++ G TRLE W S+ Sbjct 124 SVLAVYRNSRGCSEVTALDGKSGRRTAARSSDADPTLHLVSDSGYVVAQGTTRLETWGSN 183 Query 178 MVRMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKED 237 +VR + YG +DA V P + + C L S+A S V+V+E C ++ RL +L Sbjct 184 LVRGIEYGRVDAPVNPDVQPGRVDCRLFSSAISGDRVAVVEHCGEESGYRLTVLGALLSS 243 Query 238 DEPIQRI------VPEPGVRP------GSGARVLVVSQNNTAVYLPARSGAQPRVDVIDE 285 +E + + G P SG + +N A PA R+ + + Sbjct 244 EEKVTEYGSSLITIDTAGPPPVLVAMSSSGIAIYDGGTDNPAAPTPA------RIRLFNP 297 Query 286 TGATVS----STLLAKPPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTA 341 G + L PP +A G+L+T+WTG + +V DA RY + Sbjct 298 DGVPGALRDVDGLRTPPPDNPPIAD--GDLITYWTGKSTVVLDAATGEPRYQVPGA---- 351 Query 342 PVGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPA-VSGSRVIEQRG 400 +GPG MAG+LL+P GI V DP +G IP++R I V G V+EQRG Sbjct 352 -LGPGAQMAGKLLLPSPSGISVRDPATGRELHSIPLSRTDYHGGPISLRVIGGVVVEQRG 410 Query 401 DTLVAL 406 D + A Sbjct 411 DLVEAF 416 >gi|256374970|ref|YP_003098630.1| hypothetical protein Amir_0823 [Actinosynnema mirum DSM 43827] gi|255919273|gb|ACU34784.1| hypothetical protein Amir_0823 [Actinosynnema mirum DSM 43827] Length=492 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 150/415 (37%), Positives = 214/415 (52%), Gaps = 33/415 (7%) Query 7 RTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSLKQLWTA 66 RT+ D AA A + V + L+W TSD RAT S+ +P A +P SL ++W A Sbjct 95 RTRRDYAAVALVVVGALLGGLLVWLTSDVRATTSQTGPSELPALPEATALPPSLSEVWRA 154 Query 67 ASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAVAVYRYD 126 ASPAT PVV G V TG+G +V GRDP TG+ W Y RD LC V ++ AV+ Sbjct 155 ASPATPGPVVANGVVVTGEGGEVVGRDPLTGDVRWRYGRDLPLCTVGTAWNRPFAVHTKG 214 Query 127 RGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELW-RSDMVRMLAYG 185 C +V+++D ++G RG R G A+ RL ++G+ V+ G+ E++ R D+VR + YG Sbjct 215 TNCSEVTSLDAASGARGPQRDGDAELGTRLLNEGSHVVVTGERYFEVYRRDDLVRSMEYG 274 Query 186 EIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTN-QADLRLVLLRPGKEDDEPIQRI 244 ++ A V P N+ ++ CT S A + V+VLE C + ++ R+ +L+P E + Sbjct 275 QLRAIVNP-NKQPRTNCTYGSFAVTGGKVAVLERCPDLESGDRVTVLKPNPEKSD----- 328 Query 245 VPEPGVRP-----GSGARVLVVSQNNTA-------VYLPARSGAQPRVDVIDETGATVSS 292 EPGV +GARV+ V+ N A V A++G +I E VS Sbjct 329 --EPGVITTVSVGATGARVIAVTANRVAVAAAGKLVLFDAQTGG-----LISEIPVEVSE 381 Query 293 TLLA-KPPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAG 351 LA PP A + V W+TG + +LT R+T VG G +AG Sbjct 382 AELAGDPPGRVAATYHSTANVYWYTGSRTIALSLDDLTPRWT-----REGTVGAGTSLAG 436 Query 352 QLLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVAL 406 + L+PV G+ V D V+G IPV R V+ A +G V+EQRG LVAL Sbjct 437 KALLPVAEGLVVLDQVTGEEIGSIPVNRGGYGGDVVMATNGPVVLEQRGGELVAL 491 >gi|300783034|ref|YP_003763325.1| hypothetical protein AMED_1107 [Amycolatopsis mediterranei U32] gi|299792548|gb|ADJ42923.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340524412|gb|AEK39617.1| hypothetical protein RAM_05625 [Amycolatopsis mediterranei S699] Length=391 Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 141/386 (37%), Positives = 201/386 (53%), Gaps = 26/386 (6%) Query 32 TSDARATISRPAAVAVPTPAPAREVPTSLKQLWTAASPATRVPVVVGGTVATGDGRQVDG 91 TSD+ AT AA PA +VP SL ++W+A S AT VPVV G +VAT DG +V Sbjct 20 TSDSAATDRTEAAPPPALPAAPDKVPGSLSEIWSAPSGATPVPVVAGESVATADGGEVAV 79 Query 92 RDPATGESLWSYARDTDLCGVTWVYHYAVAVYRYDRGCGQVSTIDGSTGRRGAARSGYAD 151 RDP TG+ W Y RD LC + V+ AVY R C +V+ +D +TGR A R+G A+ Sbjct 80 RDPLTGQIRWHYTRDLPLCTLDQVWGRLNAVYHKSRNCSEVTQLDPATGRITAQRNGNAE 139 Query 152 PRVRLFSDGTTVLSAGDTRLELWRSDMVRMLAYGEIDARVKPSNRGLQ--SGCTLESAAA 209 +L DG+ V + G L WR D+V+ YGE+ A V N G Q +GCT + AA Sbjct 140 LGTQLIDDGSHVTATGKKLLTTWRDDLVQSAEYGEVPALV---NAGKQPRTGCTYGTLAA 196 Query 210 SSAAVSVLEACTNQADLRLVLLRPGKE-DDEPIQRIVPEPGVRPGSGARVLVVSQNNTAV 268 +S + V+E C RL + + E DDEP V V G ARV+ +S + TAV Sbjct 197 ASGKIGVIERCPGDPADRLTVYKAAPEKDDEP---QVSFSSVLAGKRARVIAMSGDLTAV 253 Query 269 YLPARS--------GAQPRVDVIDETGATVSSTLLAKPPSTSAVASRTGNLVTWWTGDAL 320 LP + G Q +D + L A PP+ + ++T + W++G + Sbjct 254 VLPDQKLLVVYNGDGTQRTAYPLD----VPPADLAADPPTGAEATTQTAANMYWFSGSKV 309 Query 321 LVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRP 380 + +L+ R+T+++ +GPGV A QL+VP+ GG+ V + G+ R + V R Sbjct 310 VALSRDDLSPRWTLSSA-----LGPGVTYAQQLVVPIKGGLAVLNENDGSTIRTVGVERR 364 Query 381 PSTSAVIPAVSGSRVIEQRGDTLVAL 406 V A +G ++EQRG TL AL Sbjct 365 GYPGVVRLAAAGPVLLEQRGPTLTAL 390 >gi|296138843|ref|YP_003646086.1| hypothetical protein Tpau_1115 [Tsukamurella paurometabola DSM 20162] gi|296026977|gb|ADG77747.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=412 Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 146/425 (35%), Positives = 219/425 (52%), Gaps = 37/425 (8%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPA----PAREV 56 MVKPERRT+ D+A A I V V +A +W S AR T+S VP P+ P E+ Sbjct 1 MVKPERRTRVDLAVTAAIVVAVLIAGLAVWNFSSARKTVSE----TVPAPSAEATPLAEL 56 Query 57 PTSLKQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVY 116 P +L+ WT A R + + G V G +V G DPATG W Y RDTD CG++ Sbjct 57 PAALRPTWTRT--ADRPALSMAGGVVLASGGEVSGHDPATGARTWRYQRDTDTCGLSTNA 114 Query 117 HYAVAVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRS 176 +A Y RGCG+++ +D TG+R RSG DP + SDG+ ++ G R++ +RS Sbjct 115 GLVLAYYPDARGCGEITALDPGTGQRKYTRSGQQDPDITTASDGSYAVAQGPRRVDAFRS 174 Query 177 DMVRMLAYGEIDARVKPSNRGLQ--SGCTLESAAASSAAVSVLEACTNQADLRLVLLRPG 234 D+V + YG D P N G+Q SGCTL SA +S ++ VLE+C + + RL ++ Sbjct 175 DLVSTVQYGRPDV---PVNPGVQPRSGCTLGSALPASPSLVVLESCPTEPNPRLTVVGIA 231 Query 235 KED-DEPIQR---IVPEPGVRPGSG---ARVLVVSQNNTAVYLPARSGAQPRVDVIDETG 287 +D D P + + P G S R+L +++ A Y+PA G RV + G Sbjct 232 PKDADRPQETSSVVAPALGTASTSEDDRPRLLAATRDGAAAYVPAHDGQPARVVTVGYRG 291 Query 288 AT-----VSSTLLAKPPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAP 342 +++T P S VA +V+++TG + +V DA L + I Sbjct 292 EVRQSVDITTTPGGAPRSVPVVAE--AGVVSFFTGTSTVVIDASTLIAQMVIPGT----- 344 Query 343 VGPGVMMAGQLLVPVTGGIGVYDPVSGANN-RYIPVTRPPSTSA-VIPAVSGSRVIEQRG 400 +GPG ++ GQ++VP + Y+ ++G N R P+ RP T V+ A++G ++ Q G Sbjct 345 LGPGTLIGGQIVVPGPTSLAAYN-LAGRNQVRLAPIPRPGYTGGPVLLALAGETIVAQWG 403 Query 401 DTLVA 405 T+ A Sbjct 404 KTVQA 408 >gi|331694933|ref|YP_004331172.1| hypothetical protein Psed_1068 [Pseudonocardia dioxanivorans CB1190] gi|326949622|gb|AEA23319.1| hypothetical protein Psed_1068 [Pseudonocardia dioxanivorans CB1190] Length=417 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 149/418 (36%), Positives = 208/418 (50%), Gaps = 25/418 (5%) Query 2 VKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAV--PTPAPAREVPTS 59 V+PERRT+ D+ A +AVVV L W +S A T S AA P+ A VP Sbjct 8 VRPERRTRADVIVAVVLAVVVLGGGVLYWRSSAAATTESVTAAPGTFPQPPSSAATVPAG 67 Query 60 LKQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYA 119 Q W S AT P+VVG V T DG V GRD TG + WSY R LC + Sbjct 68 FTQAWREPSAATSAPLVVGPAVVTADGGAVTGRDATTGTAHWSYTRTAQLCTAGSGFGEV 127 Query 120 VAVYRYD--RGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSD 177 +A+YR C +++ + S+G R A + A P RL GT V G +++ RSD Sbjct 128 MALYRNHDATACSELTVLAPSSGARRAQSNPDALPGTRLLDTGTLVAITGANYVQVVRSD 187 Query 178 MVRMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRP-GKE 236 +V+ YG + +P R + C S A + ++VLE C ++D RL ++ P G Sbjct 188 LVKTTEYGTVATPDQP-GRQPRPDCDFGSFAVTQGRLAVLERCPGESDDRLTVVAPDGGS 246 Query 237 DDEPIQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSS---- 292 D + +P +PG +V+ S + AV PA + R++V+D G VS+ Sbjct 247 DATTPSVVFSQP--QPGPHGQVVAASGDRVAVARPAPA----RLEVVDGQGNLVSTFAVP 300 Query 293 ----TLLAKPPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVM 348 L A PP A + + WWTG A + D G+LT +T+ +T+ GP V Sbjct 301 VPDADLAADPPGGVARTTSDNQHIYWWTGSATVAIDRGDLTPAWTLP--DTS---GPAVR 355 Query 349 MAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVAL 406 +LVPV GG+ V +P +GA R IPV R T V+P V+GS ++EQRG LVAL Sbjct 356 YGDSVLVPVRGGLQVVNPATGAVGRTIPVDRGSWTGPVVPGVAGSVLLEQRGPELVAL 413 >gi|324998439|ref|ZP_08119551.1| hypothetical protein PseP1_06707 [Pseudonocardia sp. P1] Length=351 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 127/359 (36%), Positives = 176/359 (50%), Gaps = 21/359 (5%) Query 56 VPTSLKQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWV 115 +P S +LW AASP T VP+V G V +G ++ GRD TG+ WSY RD LC Sbjct 1 MPASFTELWRAASPGTPVPLVAGDGVVVAEGSRISGRDATTGQERWSYTRDLPLCTTGLA 60 Query 116 YHYAVAVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWR 175 +A+YR D C ++ST+ TG RG R+ P RL VL+ G E +R Sbjct 61 DGRVLALYRNDEYCSELSTLGPDTGLRGPTRTLDTRPGTRLIGQ-DPVLATGQDYAETFR 119 Query 176 SDMVRMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRP-G 234 SD+VR YG + A+ +P ++ ++GCT S AA+ VLE C QA RL ++RP G Sbjct 120 SDLVRTAEYGTVRAQEEPGDQ-PRAGCTYLSFAAARDRAGVLERCPGQATERLSVIRPSG 178 Query 235 KEDDEPIQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTL 294 + D P+ E G GA+++ VS +AV LP PR+ + D G Sbjct 179 TDGDRPVFDSSAEIGT---DGAQLVAVSPERSAVLLP----GVPRLALYDRGGRKTGEFP 231 Query 295 LAKPPSTSAVASRTGNLVT------WWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVM 348 +A P +A A + WWTG A + D G L +++ +GPG Sbjct 232 VATGPRITAPADGVARTSSDDARRYWWTGSATVALDTGTLQPLWSVP-----GTLGPGTR 286 Query 349 MAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 +LLVPV GG+ DP +G+ R +PV R T V G + E RGD +V LG Sbjct 287 YGDRLLVPVPGGLADVDPGTGSAGRTVPVDRAGWTGPVQVTAQGGLLAELRGDQVVLLG 345 >gi|317507499|ref|ZP_07965224.1| hypothetical protein HMPREF9336_01596 [Segniliparus rugosus ATCC BAA-974] gi|316254212|gb|EFV13557.1| hypothetical protein HMPREF9336_01596 [Segniliparus rugosus ATCC BAA-974] Length=428 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 137/424 (33%), Positives = 200/424 (48%), Gaps = 42/424 (9%) Query 15 AATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSLKQLWTAASPATRVP 74 A ++A+ V V A+++WW + R +SR A+ P P A +VP + W+ A P Sbjct 3 ATSLALTVLVVAAVLWWRAPDRQAVSRTASRPAPAPRSATDVPEGFQLAWSKPDGAGTYP 62 Query 75 VVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAVAVYRYDRGCGQVST 134 +VVGGT+ T DG + G + ATG+ LW YA+ +C T + AVYR RGC V + Sbjct 63 MVVGGTLVTADGGVLTGWEVATGKELWRYAQPAPICAATVAWGKVYAVYREQRGCSLVVS 122 Query 135 IDGSTGRRGA-----ARSGYADPRVRLF----SDGT----------------TVLSAGDT 169 +D +TG R ARS AD RVRL S+G +L+ G Sbjct 123 LDATTGARAKQLHADARSSAADQRVRLITTVPSEGAAPQDDSESSDSQWYSHMILAVGPR 182 Query 170 RLELWRSDMVRMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLV 229 R+ELW D++R + YG + +P + GC L SA +VLE C LRL Sbjct 183 RVELWHEDLLRSVEYGYVATPFEPKQQP-HPGCALRSAGIGEETFAVLERCPRDTALRLS 241 Query 230 LLR-PGKEDDEPIQR---IVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDE 285 L+ K+D +P Q ++P+ G R+L V + +Y+PA ++ +D Sbjct 242 FLKITPKKDTKPEQTYSAVIPQLGS--SKDVRLLAVRGSRADLYVPASDSDGAKILEVDG 299 Query 286 TGATVSSTLLAKP---PSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAP 342 G S L+ P P T + T +L+TWWTG ++ +L+ + I Sbjct 300 RGVVEKSFDLSLPVTNPDTRPWRT-TPDLITWWTGAGVVGISPLHLSPLFQIPDL----- 353 Query 343 VGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRP-PSTSAVIPAVSGSRVIEQRGD 401 VGP MA QL+ P GI V D +GA R I PS + AV GS V+ Q+ Sbjct 354 VGPVTEMAHQLIAPTATGIAVLDASTGAKLREIATEGAGPSQAGARLAVCGSTVLRQQDG 413 Query 402 TLVA 405 ++A Sbjct 414 RVLA 417 >gi|172040178|ref|YP_001799892.1| putative secreted protein [Corynebacterium urealyticum DSM 7109] gi|171851482|emb|CAQ04458.1| putative secreted protein [Corynebacterium urealyticum DSM 7109] Length=425 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 139/429 (33%), Positives = 203/429 (48%), Gaps = 46/429 (10%) Query 3 KPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSLKQ 62 +PER ++ D A I + + V WW SDAR + R A + PA A PT+L++ Sbjct 18 RPERASRKDYLAVGAIILFLVVVLVTSWWGSDAR-RVDRTQAATLSAPAAAEAAPTTLRE 76 Query 63 LWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAVAV 122 LW SP T P+++ G V T + + D +GE W+Y R LC VT+ VA+ Sbjct 77 LWRGTSPQTVAPILLSGGVLTAEDDVLSMHDLRSGEVAWTYDRGLPLCDVTFSNERIVAI 136 Query 123 YRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDT-------RLELWR 175 YR +GCG V ++ STG YA R L D T L + D+ R+ELWR Sbjct 137 YRGSKGCGDVVSLAASTG-------DYAHTRSALAQDAATALRSNDSTGIVSPHRVELWR 189 Query 176 SDMVRMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQAD--LRLVLLRP 233 SD+VR G + VK + + C SA + ++ + C + LRL+ +P Sbjct 190 SDLVRTTEVGRQETPVKKEEQRY-ADCPFTSALTRTELLATTQHCEGEDKILLRLLKTKP 248 Query 234 GKED--DEPIQRIVPEPGVRPGSGARVLVVSQNNTAVYLP--ARSGAQPRVDVIDETGAT 289 + D +E VP G +++ ++Q++ AVY P A +P + V ++G Sbjct 249 ERSDVPEELHSFYVPRDG-------QLVAIAQHHAAVYAPTGASGDGKPELIVASDSGEV 301 Query 290 VSSTLLAKP---------PSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETT 340 + A P P A N+ TWWTGDA++ F +L +T+ Sbjct 302 NHYPMPATPALAGTAQDTPVLPVTADLPHNM-TWWTGDAVVGFHPTSLAPEFTVRGA--- 357 Query 341 APVGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPP--STSAVIPAVSGSRVIEQ 398 +G G MA +LLVPV GG+ V+D R IPV R + S V VSG V+EQ Sbjct 358 --LGAGANMADRLLVPVEGGVQVFDTKHKKKERTIPVRRDGLVAGSPVHLRVSGGFVVEQ 415 Query 399 RGDTLVALG 407 RG+ +V LG Sbjct 416 RGNEVVVLG 424 >gi|237786052|ref|YP_002906757.1| hypothetical protein ckrop_1485 [Corynebacterium kroppenstedtii DSM 44385] gi|237758964|gb|ACR18214.1| putative secreted protein [Corynebacterium kroppenstedtii DSM 44385] Length=448 Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 133/446 (30%), Positives = 213/446 (48%), Gaps = 62/446 (13%) Query 5 ERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSLKQLW 64 ER T+TD A A I ++V V +W TS+AR + A A VP L + W Sbjct 11 ERSTRTDRIAVAVITLIVVVWLLGVWVTSEARHSHLSTADSAPQAEDQLTSVPAQLHRTW 70 Query 65 TA--ASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAVAV 122 T + PA PVV G TV + ++V+G DPATG WSY R+ +LCG+T + + V Sbjct 71 THEISGPAPEGPVVSGPTVVATEEKKVEGLDPATGSVRWSYTRNQNLCGITASFSQIIPV 130 Query 123 YRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVRML 182 ++ GCG+VS++D +TG +R + + V TR+ELWR+D+VR + Sbjct 131 FKGPGGCGEVSSLDDATGEYSHSRESANSGPISMVRSNDNVGVVTPTRMELWRNDLVRTV 190 Query 183 AYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLR-LVLLRPGKEDDEPI 241 +G++D + +P + CT+ SA S ++V+E C + D +LR + Sbjct 191 EFGDVDDQAEPDMQPFPR-CTIRSALTRSDLLAVVENCPDDKDTEGHAMLR--------L 241 Query 242 QRIVPEPGVRP---------GSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSS 292 + VP+ +P A+++ +S++ AVY+ A + PR+DV+D+ G SS Sbjct 242 MKAVPDDSRKPEMIKSYNLGADTAQIVAISESKAAVYVDAPT---PRIDVVDKKGHVTSS 298 Query 293 TLL-------------------AKPPSTSAVASRTG-NLVTWWTGDALLVFDAGNLTQRY 332 ++ +P +T A G + + WW G+ L FD +L+ ++ Sbjct 299 QVVEPSPLIKAHKRANADAAGKGEPQNTFEPAINDGPHNMFWWDGERLYAFDPEDLSVQF 358 Query 333 TIAAGETTAPVGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPP----------S 382 +A T V+ LLVPV GG+ V D G + IPV R Sbjct 359 VVADALGTG----DVVGDNHLLVPVKGGVSVVDTKKGEAGKTIPVNRASRGDAVSTGGDD 414 Query 383 TSAVIPAVS----GSRVIEQRGDTLV 404 ++A+ AVS G ++E++G+ LV Sbjct 415 STAIADAVSLRVAGKTIVERQGNALV 440 >gi|337290207|ref|YP_004629228.1| hypothetical protein CULC22_00593 [Corynebacterium ulcerans BR-AD22] gi|334698513|gb|AEG83309.1| putative secreted protein [Corynebacterium ulcerans BR-AD22] Length=401 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 126/414 (31%), Positives = 195/414 (48%), Gaps = 24/414 (5%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSL 60 M K RRT+ D+ AA IA + S++W T+ PAA ++ T A SL Sbjct 1 MTKSLRRTRKDLIAATIIAGISITGVSIVWATAPINKVTHSPAAQSMRTSAVPPVPVHSL 60 Query 61 KQLW-TAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYA 119 Q W T A T P++ G + DGR ++ +PATG +WSYAR LC + + Sbjct 61 TQQWETPADQLTTKPIIAAGLAISYDGRSINAINPATGTPVWSYARPEPLCSLGQAWSSV 120 Query 120 VAVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMV 179 V + RGCG V ++D ++G A RS A V S V + R+ELWRSD+V Sbjct 121 VVTFHTGRGCGDVVSLDAASGTYKATRSASASDAVVPLSSNDNVGTVSSERVELWRSDLV 180 Query 180 RMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPGKEDDE 239 R + YG++ + + +N+ C + SA + + + V E C LR P +D Sbjct 181 RTVEYGDVPIK-QEANQQPHEDCEISSALSRKSLLGVTEKCEKSWWLRFQKTVP---EDS 236 Query 240 PIQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTLLAKPP 299 + I + + G AR++ + Q + AV++ S +PR+D + +G +S + P Sbjct 237 RVPEITHDIHIS-GDNARIIAIGQESAAVFV---STPKPRIDSFNNSGERTASI---EVP 289 Query 300 STSAVASRTG-------NLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQ 352 + + A G + +TW+ G+ L +F+ +L I +G GV + + Sbjct 290 AVNDAAWEHGPAVADLPHHITWFDGERLYLFNPSSLHVERVI-----DNVLGTGVAVNNK 344 Query 353 LLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVAL 406 L VPV GI V + +G V R T V ++G VIE+RGD LV L Sbjct 345 LYVPVLDGIAVINWDTGETESVFAVDRNRYTGLVSLGLAGDHVIEKRGDHLVGL 398 >gi|302524384|ref|ZP_07276726.1| predicted protein [Streptomyces sp. AA4] gi|302433279|gb|EFL05095.1| predicted protein [Streptomyces sp. AA4] Length=392 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 120/367 (33%), Positives = 184/367 (51%), Gaps = 23/367 (6%) Query 50 PAPAREVPTSLKQLWTAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDT-D 108 PAP VP S+ QLW A S AT +P+ TV T DG +V GRDP TG+ W Y R+ Sbjct 38 PAPPTSVPGSMTQLWQAPSAATPIPIGQSDTVTTADGSEVAGRDPLTGQIRWHYTRENLQ 97 Query 109 LCGVTWVYHYAVAVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGD 168 LC V + AVY GC +V+ +D +TGR A R+G A+ RL SDG+ V + G Sbjct 98 LCTVDAAWGRVNAVYHKSMGCSEVTQLDPATGRITAQRNGDAELGTRLVSDGSHVTTTGK 157 Query 169 TRLELWRSDMVRMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRL 228 L+ WR D+V+ + YG++ ++ +N+ + CT + AA++ + V+E C RL Sbjct 158 HLLDTWRDDLVKSMEYGKV-PFLQNANKQPRPNCTYGTVAAAADKIGVIERCPGDRTDRL 216 Query 229 VLLRPGKE-DDEPIQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARS--------GAQPR 279 + + E +DEP V + G ARV+ +S + T V LP + G+Q Sbjct 217 TVYKATAEHEDEP---KVTYTALLAGKRARVVAMSGDLTGVLLPDQKLYVVYGADGSQKA 273 Query 280 VDVIDETGATVSSTLLAKPPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGET 339 +D A ++ P + +RT + W+TG + +L+ R+T+ Sbjct 274 AYPMDLPAADTAN----DPVGGTEATTRTAAGMYWFTGSKTVALSRDDLSPRWTL----- 324 Query 340 TAPVGPGVMMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQR 399 +GPG+ A QL+VP+ GG+ V + +GA R + + R V G ++EQR Sbjct 325 DGTLGPGITFATQLVVPIRGGLAVLNETNGATLRTVGIDRGAYAGPVRLTALGPVLLEQR 384 Query 400 GDTLVAL 406 G + AL Sbjct 385 GQNVAAL 391 >gi|334696328|gb|AEG81125.1| putative secreted protein [Corynebacterium ulcerans 809] Length=401 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 129/419 (31%), Positives = 195/419 (47%), Gaps = 34/419 (8%) Query 1 MVKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAA-----VAVPTPAPARE 55 M K RRT+ D+ AA IA + S++W T+ PAA AVP P P Sbjct 1 MTKSLRRTRKDLIAATIIAGISITGVSIVWATAPINKVTHSPAAQSMRSSAVP-PVPVH- 58 Query 56 VPTSLKQLW-TAASPATRVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTW 114 SL Q W T A T P++ G + DGR ++ +PATG +WSYAR LC + Sbjct 59 ---SLTQQWETPADQLTTKPIIAAGLAVSYDGRSINAINPATGTPVWSYARPEPLCSLGQ 115 Query 115 VYHYAVAVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELW 174 + V + RGCG V ++D ++G A RS A V S V + R+ELW Sbjct 116 AWSSVVVTFHTGRGCGDVVSLDAASGTYKATRSASASDAVVPLSSNDNVGTVSSERVELW 175 Query 175 RSDMVRMLAYGEIDARVKPSNRGLQSGCTLESAAASSAAVSVLEACTNQADLRLVLLRPG 234 RSD+VR + YG++ + + +N+ C + SA + + + V E C LR P Sbjct 176 RSDLVRTVEYGDVPIK-QEANQQPHEDCEISSALSRKSLLGVTEKCEKSWWLRFQKTVP- 233 Query 235 KEDDEPIQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGATVSSTL 294 +D + I + + G AR++ + Q + AV++ S +PR+D +G +S Sbjct 234 --EDSRVPEITHDIHIS-GDNARIIAIGQESAAVFV---STPKPRIDSFSNSGERTASI- 286 Query 295 LAKPPSTSAVASRTG-------NLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGV 347 + P+ + A G + +TW+ G+ L +F+ +L I +G GV Sbjct 287 --EVPAVNDAAWEHGPAVADLPHHITWFDGERLYLFNPSSLHVERVI-----DNVLGTGV 339 Query 348 MMAGQLLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVAL 406 + +L VPV GI V + +G V R T V ++G VIE+RGD LV L Sbjct 340 AINNKLYVPVLDGIAVINWDTGETESVFAVDRNRYTGLVSLGLAGDHVIEKRGDHLVGL 398 >gi|19551996|ref|NP_599998.1| hypothetical protein NCgl0736 [Corynebacterium glutamicum ATCC 13032] gi|62389659|ref|YP_225061.1| hypothetical protein cg0880 [Corynebacterium glutamicum ATCC 13032] gi|21323536|dbj|BAB98163.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] gi|41324994|emb|CAF19475.1| secreted protein [Corynebacterium glutamicum ATCC 13032] Length=400 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 123/415 (30%), Positives = 192/415 (47%), Gaps = 28/415 (6%) Query 2 VKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSLK 61 ++P +RTK D+ A I + + +W T+ R + PA +P +L Sbjct 5 LQPLKRTKKDLIATGVITALAVIGVGTVWATAPIRGSELTPADEPFIASTTLDAIPETLS 64 Query 62 QLWTAASPAT-RVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 + W A +T P++ GG ++T DG + P G LWSY RD +LC ++ + AV Sbjct 65 EHWRATDTSTNHKPLITGGVISTADGNTIKTYTP-DGALLWSYERDKELCSLSVGFDAAV 123 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 A Y+ GCG V+ I+ + G+ A RS + V S + G RLELWRSD+VR Sbjct 124 ATYKTGIGCGDVTAINANDGQYQATRSAISSDHVAPISSNDRIGVLGTERLELWRSDLVR 183 Query 181 MLAYGEIDARVKPSNRGLQSG--CTLESAAASSAAVSVLEACTNQAD-LRLVLLRPGKED 237 + YG+++A P G Q C++ SA +++ E C + + LR + P D Sbjct 184 TIEYGDVEA---PQESGQQPHPECSITSAMTRKDLLAITEDCPDGSSYLRFMGTTP---D 237 Query 238 DEPIQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGA-----TVSS 292 D I + + G R++ + Q+ AVY + PR+ ++ G V Sbjct 238 DSRTPEITQDIEITDG---RIVAIGQSVAAVY---TNDPSPRIVSYNDDGELVGEQAVDE 291 Query 293 TLLAKPPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQ 352 PP SA A ++ +W+ GD+L++F L R + +G G+ + G Sbjct 292 VEFPDPPFQSATADLPHHM-SWFNGDSLVLFSPTQLNVRQSF-----NDALGTGIALNGS 345 Query 353 LLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 LL P GI V + +G R IPV R V V G ++E+RG +VALG Sbjct 346 LLYPTAEGITVANWDTGEVQRTIPVDRAGYDGEVALGVVGQVIVEKRGSEIVALG 400 >gi|344043729|gb|EGV39417.1| hypothetical protein CgS9114_13161 [Corynebacterium glutamicum S9114] Length=400 Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 123/415 (30%), Positives = 192/415 (47%), Gaps = 28/415 (6%) Query 2 VKPERRTKTDIAAAATIAVVVAVAASLIWWTSDARATISRPAAVAVPTPAPAREVPTSLK 61 ++P +RTK D+ A I + + +W T+ R + PA +P L Sbjct 5 LQPLKRTKKDLIATGVITALAVIGVGTVWATAPIRGSELTPADEPFIASTTLDAIPEKLS 64 Query 62 QLWTAASPAT-RVPVVVGGTVATGDGRQVDGRDPATGESLWSYARDTDLCGVTWVYHYAV 120 + W A +T P++ GG ++T DG + P G LWSY RD +LC ++ + AV Sbjct 65 EHWRATDTSTNHKPLITGGVISTADGNTIKTYTP-DGVLLWSYERDKELCSLSVGFDAAV 123 Query 121 AVYRYDRGCGQVSTIDGSTGRRGAARSGYADPRVRLFSDGTTVLSAGDTRLELWRSDMVR 180 A Y+ GCG V+ I+ + G+ A RS + V S + G RLELWRSD+VR Sbjct 124 ATYKTGIGCGDVTAINANDGQYKATRSAISSDHVAPISSNDRIGVLGTERLELWRSDLVR 183 Query 181 MLAYGEIDARVKPSNRGLQSG--CTLESAAASSAAVSVLEACTNQAD-LRLVLLRPGKED 237 + YG+++A P G Q C++ SA +++ E C + + LR + P D Sbjct 184 TIEYGDVEA---PQESGQQPHPECSITSAMTRKDLLAITEDCPDGSSYLRFMGTTP---D 237 Query 238 DEPIQRIVPEPGVRPGSGARVLVVSQNNTAVYLPARSGAQPRVDVIDETGA-----TVSS 292 D I + + G R++ + Q+ AVY + PR+ ++ G V+ Sbjct 238 DSRTPEITQDIEITDG---RIVAIGQSAAAVY---TNDPSPRIVSYNDDGELVGEQAVNE 291 Query 293 TLLAKPPSTSAVASRTGNLVTWWTGDALLVFDAGNLTQRYTIAAGETTAPVGPGVMMAGQ 352 PP SA A ++ +W+ GD+L++F L R + +G G+ + G Sbjct 292 VEFPDPPFQSATADLPHHM-SWFNGDSLVLFSPTQLNVRQSFDDA-----LGTGIALNGS 345 Query 353 LLVPVTGGIGVYDPVSGANNRYIPVTRPPSTSAVIPAVSGSRVIEQRGDTLVALG 407 LL P GI V + +G R IPV R V V G ++E+RG +VALG Sbjct 346 LLYPTAEGITVANWDTGEVQRTIPVDRAGYGGEVALGVVGQVIVEKRGSEIVALG 400 Lambda K H 0.315 0.130 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 810175551480 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40