BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3220c Length=501 Score E Sequences producing significant alignments: (Bits) Value gi|15610356|ref|NP_217736.1| two component sensor kinase [Mycoba... 994 0.0 gi|31794398|ref|NP_856891.1| two component sensor kinase [Mycoba... 992 0.0 gi|148824419|ref|YP_001289173.1| two component sensor kinase [My... 991 0.0 gi|289448906|ref|ZP_06438650.1| two component system sensor kina... 991 0.0 gi|289747036|ref|ZP_06506414.1| two component sensor kinase [Myc... 991 0.0 gi|306782267|ref|ZP_07420604.1| two component system sensor kina... 988 0.0 gi|289751910|ref|ZP_06511288.1| signal transduction histidine ki... 915 0.0 gi|240170390|ref|ZP_04749049.1| sensor kinase from two-component... 834 0.0 gi|183981360|ref|YP_001849651.1| sensor kinase from two-componen... 832 0.0 gi|118618024|ref|YP_906356.1| sensor kinase from two component r... 831 0.0 gi|254776607|ref|ZP_05218123.1| sensor histidine kinase [Mycobac... 827 0.0 gi|118466753|ref|YP_883315.1| sensor histidine kinase [Mycobacte... 826 0.0 gi|41409419|ref|NP_962255.1| hypothetical protein MAP3321c [Myco... 825 0.0 gi|342861178|ref|ZP_08717827.1| sensor histidine kinase [Mycobac... 821 0.0 gi|296169003|ref|ZP_06850669.1| sensor histidine kinase [Mycobac... 818 0.0 gi|254819136|ref|ZP_05224137.1| sensor histidine kinase [Mycobac... 818 0.0 gi|15827350|ref|NP_301613.1| two-component system sensor kinase ... 806 0.0 gi|108798353|ref|YP_638550.1| signal transduction histidine kina... 752 0.0 gi|126434018|ref|YP_001069709.1| signal transduction histidine k... 752 0.0 gi|315445561|ref|YP_004078440.1| signal transduction histidine k... 736 0.0 gi|120402780|ref|YP_952609.1| signal transduction histidine kina... 735 0.0 gi|145225264|ref|YP_001135942.1| signal transduction histidine k... 735 0.0 gi|118468520|ref|YP_886284.1| sensor histidine kinase [Mycobacte... 731 0.0 gi|333991573|ref|YP_004524187.1| sensor kinase from two-componen... 701 0.0 gi|169630621|ref|YP_001704270.1| two component sensor kinase [My... 701 0.0 gi|111023307|ref|YP_706279.1| histidine kinase [Rhodococcus jost... 590 2e-166 gi|226365814|ref|YP_002783597.1| two-component histidine kinase ... 589 4e-166 gi|312140652|ref|YP_004007988.1| two component system sensor kin... 577 2e-162 gi|229489533|ref|ZP_04383396.1| sensor histidine kinase [Rhodoco... 570 2e-160 gi|226305676|ref|YP_002765636.1| two-component histidine kinase ... 570 2e-160 gi|54026554|ref|YP_120796.1| putative two-component system senso... 570 3e-160 gi|333921431|ref|YP_004495012.1| putative two-component histidin... 561 9e-158 gi|300789788|ref|YP_003770079.1| two-component system sensor kin... 488 9e-136 gi|134102861|ref|YP_001108522.1| putative two-component system s... 484 1e-134 gi|302529993|ref|ZP_07282335.1| histidine kinase [Streptomyces s... 483 4e-134 gi|256380280|ref|YP_003103940.1| signal transduction histidine k... 482 6e-134 gi|257057041|ref|YP_003134873.1| signal transduction histidine k... 476 3e-132 gi|296138837|ref|YP_003646080.1| signal transduction histidine k... 467 2e-129 gi|258651645|ref|YP_003200801.1| signal transduction histidine k... 459 7e-127 gi|343927611|ref|ZP_08767079.1| putative two-component histidine... 456 4e-126 gi|331698905|ref|YP_004335144.1| signal transduction histidine k... 450 3e-124 gi|262203400|ref|YP_003274608.1| histidine kinase dimerization/p... 446 5e-123 gi|291302627|ref|YP_003513905.1| signal transduction histidine k... 417 3e-114 gi|324998110|ref|ZP_08119222.1| signal transduction histidine ki... 414 2e-113 gi|326383292|ref|ZP_08204980.1| histidine kinase dimerization/ph... 412 7e-113 gi|330469940|ref|YP_004407683.1| histidine kinase dimerization/p... 411 1e-112 gi|302869691|ref|YP_003838328.1| histidine kinase dimerization/p... 405 7e-111 gi|315503827|ref|YP_004082714.1| signal transduction histidine k... 404 2e-110 gi|317508056|ref|ZP_07965742.1| histidine kinase [Segniliparus r... 403 4e-110 gi|284033089|ref|YP_003383020.1| signal transduction histidine k... 402 7e-110 >gi|15610356|ref|NP_217736.1| two component sensor kinase [Mycobacterium tuberculosis H37Rv] gi|15842807|ref|NP_337844.1| sensor histidine kinase [Mycobacterium tuberculosis CDC1551] gi|148663081|ref|YP_001284604.1| putative two component sensor kinase [Mycobacterium tuberculosis H37Ra] 42 more sequence titles Length=501 Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust. Identities = 501/501 (100%), Positives = 501/501 (100%), Gaps = 0/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN Sbjct 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD Sbjct 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG Sbjct 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL Sbjct 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE Sbjct 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA Sbjct 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA Sbjct 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 Query 481 RERGTDVVLRVPVGRRGRLML 501 RERGTDVVLRVPVGRRGRLML Sbjct 481 RERGTDVVLRVPVGRRGRLML 501 >gi|31794398|ref|NP_856891.1| two component sensor kinase [Mycobacterium bovis AF2122/97] gi|121639107|ref|YP_979331.1| putative two component sensor kinase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121639199|ref|YP_979423.1| putative two component sensor kinase [Mycobacterium bovis BCG str. Pasteur 1173P2] 6 more sequence titles Length=501 Score = 992 bits (2565), Expect = 0.0, Method: Compositional matrix adjust. Identities = 500/501 (99%), Positives = 501/501 (100%), Gaps = 0/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRR+DGVLVCVAQCRPN Sbjct 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRNDGVLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD Sbjct 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG Sbjct 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL Sbjct 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE Sbjct 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA Sbjct 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA Sbjct 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 Query 481 RERGTDVVLRVPVGRRGRLML 501 RERGTDVVLRVPVGRRGRLML Sbjct 481 RERGTDVVLRVPVGRRGRLML 501 >gi|148824419|ref|YP_001289173.1| two component sensor kinase [Mycobacterium tuberculosis F11] gi|148722946|gb|ABR07571.1| two component sensor kinase [Mycobacterium tuberculosis F11] Length=501 Score = 991 bits (2563), Expect = 0.0, Method: Compositional matrix adjust. Identities = 500/501 (99%), Positives = 500/501 (99%), Gaps = 0/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN Sbjct 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQ NSCQHDGHSVEVSPVRFGD Sbjct 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQHNSCQHDGHSVEVSPVRFGD 120 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG Sbjct 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL Sbjct 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE Sbjct 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA Sbjct 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA Sbjct 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 Query 481 RERGTDVVLRVPVGRRGRLML 501 RERGTDVVLRVPVGRRGRLML Sbjct 481 RERGTDVVLRVPVGRRGRLML 501 >gi|289448906|ref|ZP_06438650.1| two component system sensor kinase [Mycobacterium tuberculosis CPHL_A] gi|289421864|gb|EFD19065.1| two component system sensor kinase [Mycobacterium tuberculosis CPHL_A] Length=501 Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust. Identities = 500/501 (99%), Positives = 500/501 (99%), Gaps = 0/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN Sbjct 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD Sbjct 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG Sbjct 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL Sbjct 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE Sbjct 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDS RATALIMVITELVQNAIEHAFDPAAA Sbjct 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSGRATALIMVITELVQNAIEHAFDPAAA 420 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA Sbjct 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 Query 481 RERGTDVVLRVPVGRRGRLML 501 RERGTDVVLRVPVGRRGRLML Sbjct 481 RERGTDVVLRVPVGRRGRLML 501 >gi|289747036|ref|ZP_06506414.1| two component sensor kinase [Mycobacterium tuberculosis 02_1987] gi|289759356|ref|ZP_06518734.1| two component sensor kinase [Mycobacterium tuberculosis T85] gi|294993256|ref|ZP_06798947.1| two component system sensor kinase [Mycobacterium tuberculosis 210] 7 more sequence titles Length=501 Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust. Identities = 500/501 (99%), Positives = 500/501 (99%), Gaps = 0/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN Sbjct 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGRE AVGQQNSCQHDGHSVEVSPVRFGD Sbjct 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGRERAVGQQNSCQHDGHSVEVSPVRFGD 120 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG Sbjct 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL Sbjct 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE Sbjct 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA Sbjct 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA Sbjct 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 Query 481 RERGTDVVLRVPVGRRGRLML 501 RERGTDVVLRVPVGRRGRLML Sbjct 481 RERGTDVVLRVPVGRRGRLML 501 >gi|306782267|ref|ZP_07420604.1| two component system sensor kinase [Mycobacterium tuberculosis SUMu002] gi|306786090|ref|ZP_07424412.1| two component system sensor kinase [Mycobacterium tuberculosis SUMu003] gi|306790457|ref|ZP_07428779.1| two component system sensor kinase [Mycobacterium tuberculosis SUMu004] 13 more sequence titles Length=500 Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust. Identities = 500/501 (99%), Positives = 500/501 (99%), Gaps = 1/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN Sbjct 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD Sbjct 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG Sbjct 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL Sbjct 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE Sbjct 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDP AA Sbjct 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDP-AA 419 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA Sbjct 420 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 479 Query 481 RERGTDVVLRVPVGRRGRLML 501 RERGTDVVLRVPVGRRGRLML Sbjct 480 RERGTDVVLRVPVGRRGRLML 500 >gi|289751910|ref|ZP_06511288.1| signal transduction histidine kinase [Mycobacterium tuberculosis T92] gi|289692497|gb|EFD59926.1| signal transduction histidine kinase [Mycobacterium tuberculosis T92] Length=475 Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/459 (100%), Positives = 459/459 (100%), Gaps = 0/459 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN Sbjct 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD Sbjct 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG Sbjct 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL Sbjct 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE Sbjct 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA Sbjct 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLG 459 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLG Sbjct 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLG 459 >gi|240170390|ref|ZP_04749049.1| sensor kinase from two-component regulatory system [Mycobacterium kansasii ATCC 12478] Length=500 Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/501 (86%), Positives = 457/501 (92%), Gaps = 2/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPG+AVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN Sbjct 1 MSTLGDLLAEHTVLPGNAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PTV+ TDAVGT VA + +PLVA TF+ G +G + +S + G +V SPVR+G Sbjct 61 TAPTVLQTDAVGTAVAGDKLPLVAETFTSGAAKWQGD-AECHSGELPGPNVAASPVRYGG 119 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLT+HQ +AA+R SGHLETAYR CA DLL ML+EGTFPD GDVAMSRS+PRAGDG Sbjct 120 QVVAVLTQHQTAVAAQRASGHLETAYRECAIDLLHMLSEGTFPDVGDVAMSRSTPRAGDG 179 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRL+VDGVV+YASPNALSAYHRMGLTTELEG +L++ TRPLISDPFEA EV EHV+DLL Sbjct 180 FIRLNVDGVVAYASPNALSAYHRMGLTTELEGHHLVEVTRPLISDPFEAEEVAEHVRDLL 239 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 G G MRMEVDAGGATVLLRTLPL+V G + GAAILIRDVTEVKRRDRALISKDATIRE Sbjct 240 TG-GPSMRMEVDAGGATVLLRTLPLMVHGASAGAAILIRDVTEVKRRDRALISKDATIRE 298 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+NAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 299 IHHRVKNNLQTVAALLRLQARRTANAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 358 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAA Sbjct 359 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAQ 418 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 GSVTIRAERSARWLDVVVHDDG GLP+GF+LEKSDSLGLQIVRTLVSAELDGSLGMR+A Sbjct 419 GGSVTIRAERSARWLDVVVHDDGRGLPEGFNLEKSDSLGLQIVRTLVSAELDGSLGMREA 478 Query 481 RERGTDVVLRVPVGRRGRLML 501 ERGTDVVLRVP+GRRGRLM+ Sbjct 479 PERGTDVVLRVPIGRRGRLMV 499 >gi|183981360|ref|YP_001849651.1| sensor kinase from two-component regulatory system [Mycobacterium marinum M] gi|183174686|gb|ACC39796.1| sensor kinase from two-component regulatory system [Mycobacterium marinum M] Length=499 Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/500 (86%), Positives = 455/500 (91%), Gaps = 2/500 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLG+LLAE+T+LPG+AVDHLHAVVGEWQLLADLSFADYLMWV RDDG LVCVAQCRPN Sbjct 1 MSTLGNLLAENTMLPGNAVDHLHAVVGEWQLLADLSFADYLMWVARDDGALVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PTV+ TDAVG+VV A+ +PLVA TF+ G R+ QQ+ Q G S+E SPVR+GD Sbjct 61 TAPTVLQTDAVGSVVEADRLPLVAETFASGSARRDSDADQQHLGQLPGPSIEASPVRYGD 120 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLT+HQ +AA R SGHLE+AYR CATDLL+MLAEGTFPD GDVAMSRS+PRAGDG Sbjct 121 QVVAVLTQHQTAVAAERASGHLESAYRDCATDLLQMLAEGTFPDVGDVAMSRSTPRAGDG 180 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDVDGV YASPNALSAYHRMGLTTELEG LI+ TRPLISDPFEA EV EHV+DLL Sbjct 181 FIRLDVDGVAIYASPNALSAYHRMGLTTELEGHELIEVTRPLISDPFEAEEVAEHVRDLL 240 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 G G+ MRMEVDAGGATVLLRTLPLVV G + GAAILIRDVTEVKRRDRALISKDATIRE Sbjct 241 VG-GRSMRMEVDAGGATVLLRTLPLVVGGVSAGAAILIRDVTEVKRRDRALISKDATIRE 299 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+NAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 300 IHHRVKNNLQTVAALLRLQARRTTNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 359 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDP AA Sbjct 360 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDP-AA 418 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 +G+VTIRAERSARWLDVVVHDDG GLP GFSLEKSDSLGLQIVRTLVSAELDGSLGMR+A Sbjct 419 QGAVTIRAERSARWLDVVVHDDGRGLPSGFSLEKSDSLGLQIVRTLVSAELDGSLGMREA 478 Query 481 RERGTDVVLRVPVGRRGRLM 500 RGTDVVLRVP+GRRGRL+ Sbjct 479 PGRGTDVVLRVPIGRRGRLL 498 >gi|118618024|ref|YP_906356.1| sensor kinase from two component regulatory system [Mycobacterium ulcerans Agy99] gi|118570134|gb|ABL04885.1| sensor kinase from two component regulatory system [Mycobacterium ulcerans Agy99] Length=499 Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/500 (86%), Positives = 454/500 (91%), Gaps = 2/500 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLG+LLAE+T+LPG+AVDHLHAVVGEWQLLADLSFADYLMWV RDDG LVCVAQCRPN Sbjct 1 MSTLGNLLAENTMLPGNAVDHLHAVVGEWQLLADLSFADYLMWVARDDGALVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PTV+ TDAVG+VV A+ +PLVA TF+ G R+ QQ+ Q G S+E SPVR+GD Sbjct 61 TAPTVLQTDAVGSVVEADRLPLVAETFASGSARRDSDADQQHLGQLPGPSIEASPVRYGD 120 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLT+HQ +AA R SGHLE+AYR CATDLL+MLAEGTFPD GDVAMSRS+PRAGDG Sbjct 121 QVVAVLTQHQTAVAAERASGHLESAYRDCATDLLQMLAEGTFPDVGDVAMSRSTPRAGDG 180 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDVDGV YASPNALSAYHRMGLTTELEG LI+ TRPLISDPFEA EV EHV+DLL Sbjct 181 FIRLDVDGVAIYASPNALSAYHRMGLTTELEGHELIEVTRPLISDPFEAEEVAEHVRDLL 240 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 G G+ MRMEVDAGGATVLLRTLPLVV G + GAAILIRDVTEVKRRDRALISKDATIRE Sbjct 241 VG-GRSMRMEVDAGGATVLLRTLPLVVGGVSAGAAILIRDVTEVKRRDRALISKDATIRE 299 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+NAEGREAL ESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 300 IHHRVKNNLQTVAALLRLQARRTTNAEGREALTESVRRVSSIALVHDALSMSVDEQVNLD 359 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDP AA Sbjct 360 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDP-AA 418 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 +G+VTIRAERSARWLDVVVHDDG GLP GFSLEKSDSLGLQIVRTLVSAELDGSLGMR+A Sbjct 419 QGAVTIRAERSARWLDVVVHDDGRGLPSGFSLEKSDSLGLQIVRTLVSAELDGSLGMREA 478 Query 481 RERGTDVVLRVPVGRRGRLM 500 RGTDVVLRVP+GRRGRL+ Sbjct 479 PGRGTDVVLRVPIGRRGRLL 498 >gi|254776607|ref|ZP_05218123.1| sensor histidine kinase [Mycobacterium avium subsp. avium ATCC 25291] Length=499 Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/501 (85%), Positives = 451/501 (91%), Gaps = 2/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHT+LPG+AVDHLHAVVGEWQLLADLSFADYLMWV RDDG+LVCVAQCRPN Sbjct 1 MSTLGDLLAEHTMLPGNAVDHLHAVVGEWQLLADLSFADYLMWVCRDDGMLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PTV+ TDAVGTVVA+ + LVA TF+ G + QQ+S H VE SPVR+G Sbjct 61 TAPTVLQTDAVGTVVASERLTLVAETFASGAAKADDVAAQQDSWLPGTH-VEASPVRYGG 119 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 +VVAVLTRHQ +AA R SG LE AYR CA DL+ MLAEGTFPD GDVAMSRS+PRAGDG Sbjct 120 RVVAVLTRHQTAVAADRASGQLEIAYRECAADLVHMLAEGTFPDVGDVAMSRSTPRAGDG 179 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDV+GVV+YASPNALSAYHRMGLTTELEG NLI+ TRPLISD FEA E+ EHV+DLL Sbjct 180 FIRLDVNGVVAYASPNALSAYHRMGLTTELEGHNLIEITRPLISDSFEAQEMAEHVKDLL 239 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AG GK MRMEVDAGGATVLLRTLPLVV G + GAA+LIRDVTEVKRRDRALISKDATIRE Sbjct 240 AG-GKSMRMEVDAGGATVLLRTLPLVVNGASAGAAVLIRDVTEVKRRDRALISKDATIRE 298 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+N EGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 299 IHHRVKNNLQTVAALLRLQARRTTNPEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 358 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA Sbjct 359 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 418 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EGSVTIRAERSARWLDVVVHDDG GLP+GFSLE SDSLGLQIVRTLVSAELDG+LGM +A Sbjct 419 EGSVTIRAERSARWLDVVVHDDGRGLPEGFSLEASDSLGLQIVRTLVSAELDGTLGMSEA 478 Query 481 RERGTDVVLRVPVGRRGRLML 501 ERGTDVVLRVP+GRR R++L Sbjct 479 SERGTDVVLRVPIGRRTRMLL 499 >gi|118466753|ref|YP_883315.1| sensor histidine kinase [Mycobacterium avium 104] gi|118168040|gb|ABK68937.1| sensor histidine kinase [Mycobacterium avium 104] Length=499 Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/501 (85%), Positives = 450/501 (90%), Gaps = 2/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHT+LPG+AVDHLHAVVGEWQLLADLSFADYLMWV RDDG+LVCVAQCRPN Sbjct 1 MSTLGDLLAEHTMLPGNAVDHLHAVVGEWQLLADLSFADYLMWVCRDDGMLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PTV+ TDAVGTVVA+ + LVA TF+ G + QQ+S H VE SPVR+G Sbjct 61 TAPTVLQTDAVGTVVASERLTLVAETFASGAAKADDVAAQQDSWLPGTH-VEASPVRYGG 119 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 VVAVLTRHQ +AA R SG LE AYR CA DL+ MLAEGTFPD GDVAMSRS+PRAGDG Sbjct 120 HVVAVLTRHQTAVAADRASGQLEIAYRECAADLVHMLAEGTFPDVGDVAMSRSTPRAGDG 179 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDV+GVV+YASPNALSAYHRMGLTTELEG NLI+ TRPLISD FEA E+ EHV+DLL Sbjct 180 FIRLDVNGVVAYASPNALSAYHRMGLTTELEGHNLIEITRPLISDSFEAQEMAEHVKDLL 239 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AG GK MRMEVDAGGATVLLRTLPLVV G + GAA+LIRDVTEVKRRDRALISKDATIRE Sbjct 240 AG-GKSMRMEVDAGGATVLLRTLPLVVNGASAGAAVLIRDVTEVKRRDRALISKDATIRE 298 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+N EGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 299 IHHRVKNNLQTVAALLRLQARRTTNPEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 358 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA Sbjct 359 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 418 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EGSVTIRAERSARWLDVVVHDDG GLP+GFSLE SDSLGLQIVRTLVSAELDG+LGM +A Sbjct 419 EGSVTIRAERSARWLDVVVHDDGRGLPEGFSLEASDSLGLQIVRTLVSAELDGTLGMSEA 478 Query 481 RERGTDVVLRVPVGRRGRLML 501 ERGTDVVLRVP+GRR R++L Sbjct 479 SERGTDVVLRVPIGRRTRMLL 499 >gi|41409419|ref|NP_962255.1| hypothetical protein MAP3321c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398250|gb|AAS05871.1| hypothetical protein MAP_3321c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459511|gb|EGO38448.1| signal transduction histidine kinase [Mycobacterium avium subsp. paratuberculosis S397] Length=499 Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/501 (85%), Positives = 449/501 (90%), Gaps = 2/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHT+LPG+AVDHLHAVVGEWQLLADLSFADYLMWV RDDG+LVCVAQCRPN Sbjct 1 MSTLGDLLAEHTMLPGNAVDHLHAVVGEWQLLADLSFADYLMWVCRDDGMLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PTV+ TDAVGTVVA+ + LVA TF+ G + QQ+S H VE SPVR+G Sbjct 61 TAPTVLQTDAVGTVVASERLTLVAETFASGAAKADDVAAQQDSWLPGTH-VEASPVRYGG 119 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 VVAVLTRHQ +AA R SG LE AYR CA DL+ MLAEGTFPD GDVAMSRS+PRAGDG Sbjct 120 HVVAVLTRHQTAVAADRASGQLEIAYRECAADLVHMLAEGTFPDVGDVAMSRSTPRAGDG 179 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDV+GVV+YASPNALSAYHRMGLTTELEG NLI+ TRPLISD FEA E+ EHV+DLL Sbjct 180 FIRLDVNGVVAYASPNALSAYHRMGLTTELEGHNLIEITRPLISDSFEAQEMAEHVKDLL 239 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AG GK MRMEVDAGGATVLLRTLPLVV G + GAA+LIRDVTEVKRRDRALISKDATIRE Sbjct 240 AG-GKSMRMEVDAGGATVLLRTLPLVVNGASAGAAVLIRDVTEVKRRDRALISKDATIRE 298 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+N EGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 299 IHHRVKNNLQTVAALLRLQARRTTNPEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 358 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDP AA Sbjct 359 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPTAA 418 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EGSVTIRAERSARWLDVVVHDDG GLP+GFSLE SDSLGLQIVRTLVSAELDG+LGM +A Sbjct 419 EGSVTIRAERSARWLDVVVHDDGRGLPEGFSLEASDSLGLQIVRTLVSAELDGTLGMSEA 478 Query 481 RERGTDVVLRVPVGRRGRLML 501 ERGTDVVLRVP+GRR R++L Sbjct 479 SERGTDVVLRVPIGRRTRMLL 499 >gi|342861178|ref|ZP_08717827.1| sensor histidine kinase [Mycobacterium colombiense CECT 3035] gi|342131622|gb|EGT84892.1| sensor histidine kinase [Mycobacterium colombiense CECT 3035] Length=499 Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/501 (85%), Positives = 446/501 (90%), Gaps = 2/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHT+LPG+AVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN Sbjct 1 MSTLGDLLAEHTMLPGNAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PT + TDAVGT V ++ + LVA TF G R G ++S H VE SPVR+G Sbjct 61 TAPTALQTDAVGTAVGSDRLQLVAETFESGTAKRNDVAGPEDSWLPGTH-VEASPVRYGG 119 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 VVAVLT HQ LAA R SG LE AYR CATDL++MLAEGTFPD GDV MSRS+PRAGDG Sbjct 120 TVVAVLTHHQTALAADRASGQLEIAYRECATDLVQMLAEGTFPDVGDVVMSRSTPRAGDG 179 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDV GVV+YASPNALSAYHRMGLTTELEG NLID TRPLISDPFEA EV EHV+DL+ Sbjct 180 FIRLDVHGVVAYASPNALSAYHRMGLTTELEGHNLIDVTRPLISDPFEAQEVAEHVRDLV 239 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AG G+ MRMEVDAGGATVLLRTLPL+V G + GAA+LIRDVTEVKRRDRALISKDATIRE Sbjct 240 AG-GRSMRMEVDAGGATVLLRTLPLMVDGVSAGAAVLIRDVTEVKRRDRALISKDATIRE 298 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+NAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 299 IHHRVKNNLQTVAALLRLQARRTANAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 358 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA Sbjct 359 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 418 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EGSVTIRAERSARWLDVVVHDDG GLP GFSLE SDSLGLQIVRTLVSAELDG+LGMR A Sbjct 419 EGSVTIRAERSARWLDVVVHDDGRGLPAGFSLETSDSLGLQIVRTLVSAELDGTLGMRQA 478 Query 481 RERGTDVVLRVPVGRRGRLML 501 GTDVVLRVP+GRR RL+L Sbjct 479 PVTGTDVVLRVPIGRRTRLLL 499 >gi|296169003|ref|ZP_06850669.1| sensor histidine kinase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896345|gb|EFG76001.1| sensor histidine kinase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=500 Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/501 (85%), Positives = 448/501 (90%), Gaps = 2/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPG+AVDHLHAVVGEWQLLADLSFADYLMWVRRDDG LVCVAQCRPN Sbjct 2 MSTLGDLLAEHTVLPGNAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGKLVCVAQCRPN 61 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PTV+ TD+VG+VV A + LVA TF G P R+G GQQ+S H VE SPVR+G Sbjct 62 TAPTVLVTDSVGSVVDAERLALVADTFDSGAPQRDGVGGQQDSWLPGPH-VEASPVRYGG 120 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLTRHQ AA R SG LETAYR CA DL+ MLA+GTFPD GDV MSRS+PRAGDG Sbjct 121 QVVAVLTRHQTAGAADRTSGQLETAYRDCAGDLVHMLADGTFPDVGDVVMSRSTPRAGDG 180 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDV+GVV+YASPNA+SAYHRMGLT+ELEG NL+ TRPLISDPFEA E+ EHV DLL Sbjct 181 FIRLDVNGVVAYASPNAVSAYHRMGLTSELEGRNLVKVTRPLISDPFEAQELAEHVLDLL 240 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AG G+ MRMEVDAGGATVLLRTLPL+V G + GAA+LIRDVTEVKRRDRALISKDATIRE Sbjct 241 AG-GRSMRMEVDAGGATVLLRTLPLMVDGASAGAAVLIRDVTEVKRRDRALISKDATIRE 299 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+NAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 300 IHHRVKNNLQTVAALLRLQARRTANAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 359 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPA Sbjct 360 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAVE 419 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EGSVTIRAERSARWLDVVVHDDG GLP GFSLE SDSLGLQIVRTLVSAELDG+LGMR A Sbjct 420 EGSVTIRAERSARWLDVVVHDDGRGLPDGFSLETSDSLGLQIVRTLVSAELDGTLGMRQA 479 Query 481 RERGTDVVLRVPVGRRGRLML 501 RGTDVVLRVP+GRR RL+L Sbjct 480 PARGTDVVLRVPIGRRARLVL 500 >gi|254819136|ref|ZP_05224137.1| sensor histidine kinase [Mycobacterium intracellulare ATCC 13950] Length=499 Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/501 (84%), Positives = 445/501 (89%), Gaps = 2/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHT+LPG+AVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN Sbjct 1 MSTLGDLLAEHTMLPGNAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PTV+ TDAVGT +A+ + LVA TF+ G R+ GQ+NS H VE SPVR+G Sbjct 61 TAPTVLQTDAVGTAIASERLALVADTFASGTAKRDDVAGQENSWLPGTH-VEASPVRYGG 119 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLT HQ +AA R SG LE AYR CA DL+ MLAEGTFPDAGDV MSRS+PR GDG Sbjct 120 QVVAVLTHHQTAVAADRASGQLEIAYRQCAGDLVHMLAEGTFPDAGDVVMSRSTPRVGDG 179 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLDV GVV YASPNALSAYHRMGLT +LEG NLI+ TRPLISDPFEA EV EHV+DL+ Sbjct 180 FIRLDVKGVVDYASPNALSAYHRMGLTADLEGHNLIEVTRPLISDPFEAQEVAEHVRDLV 239 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AG G+ MRMEVDAGGATVLLRTLPLVV G + GAA+LIRDVTEVKRRDRALISKDATIRE Sbjct 240 AG-GRSMRMEVDAGGATVLLRTLPLVVDGASAGAAVLIRDVTEVKRRDRALISKDATIRE 298 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+NAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 299 IHHRVKNNLQTVAALLRLQARRTANAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 358 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPA Sbjct 359 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAVE 418 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EGSVTIRAERSARWLDVVVHDDG GLP GFSLE SDSLGLQIVRTLVSAELDG+LGM A Sbjct 419 EGSVTIRAERSARWLDVVVHDDGRGLPDGFSLETSDSLGLQIVRTLVSAELDGTLGMTQA 478 Query 481 RERGTDVVLRVPVGRRGRLML 501 RGTDVVLRVP+GRR R++L Sbjct 479 PARGTDVVLRVPIGRRTRMLL 499 >gi|15827350|ref|NP_301613.1| two-component system sensor kinase [Mycobacterium leprae TN] gi|221229828|ref|YP_002503244.1| putative two-component system sensor kinase [Mycobacterium leprae Br4923] gi|13092899|emb|CAC30313.1| putative two-component system sensor kinase [Mycobacterium leprae] gi|219932935|emb|CAR70898.1| putative two-component system sensor kinase [Mycobacterium leprae Br4923] Length=500 Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/501 (82%), Positives = 446/501 (90%), Gaps = 1/501 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPG+AV HLHAVVGEWQLLADLSFADYLMWV RDDGVLVCVAQCRP+ Sbjct 1 MSTLGDLLAEHTVLPGNAVGHLHAVVGEWQLLADLSFADYLMWVSRDDGVLVCVAQCRPH 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PTV+ TDAVG+V +A+ +PLV F+ G E A GQQ S G +V SPVR+GD Sbjct 61 TAPTVLQTDAVGSVASADMLPLVTEMFTSGAVQHEDAAGQQYSWLPFGRNVAASPVRYGD 120 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLT+HQ ELAARRR G+LE AY CATDLL MLAEGTFPD GDVA+S S+PRAGDG Sbjct 121 QVVAVLTQHQVELAARRRPGNLEIAYLACATDLLHMLAEGTFPDVGDVAVSHSTPRAGDG 180 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLD +GVV++ASPNALSA+HRMGLT EL+G NL+ TRPL+SDPFEA EV +HVQDLL Sbjct 181 FIRLDRNGVVAFASPNALSAFHRMGLTAELQGRNLVKVTRPLLSDPFEAQEVAKHVQDLL 240 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 G G MR+EV+AGGATVLLRTLPLVV G +VGAA+L+RDVTEVKRRDRALISKDATIRE Sbjct 241 DG-GPSMRVEVNAGGATVLLRTLPLVVHGSSVGAAVLVRDVTEVKRRDRALISKDATIRE 299 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARR +NAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD Sbjct 300 IHHRVKNNLQTVAALLRLQARRMANAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 359 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVASVDRPIRINRVG+LG+LDSDRATALIMVITELVQNAIEHAFDPA+ Sbjct 360 EVIDRILPIMNDVASVDRPIRINRVGNLGMLDSDRATALIMVITELVQNAIEHAFDPASQ 419 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 EG V I AERSARWLDVVVHDDG GLPQGF+LE+SDSLGLQIVRTLVS+ELDGSLGMR A Sbjct 420 EGFVAISAERSARWLDVVVHDDGRGLPQGFNLERSDSLGLQIVRTLVSSELDGSLGMRKA 479 Query 481 RERGTDVVLRVPVGRRGRLML 501 RGTDVVLRVP+GRR RL+L Sbjct 480 PNRGTDVVLRVPIGRRARLLL 500 >gi|108798353|ref|YP_638550.1| signal transduction histidine kinase [Mycobacterium sp. MCS] gi|119867450|ref|YP_937402.1| signal transduction histidine kinase [Mycobacterium sp. KMS] gi|108768772|gb|ABG07494.1| signal transduction histidine kinase [Mycobacterium sp. MCS] gi|119693539|gb|ABL90612.1| signal transduction histidine kinase [Mycobacterium sp. KMS] Length=496 Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/498 (79%), Positives = 424/498 (86%), Gaps = 5/498 (1%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPG+AVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQ RPN Sbjct 1 MSTLGDLLAEHTVLPGNAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQVRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T TV+ DAVGT +MPLV ATF G+ GREG Q ++ G +VE PVR+ + Sbjct 61 TAATVLLADAVGTTAIPETMPLVTATFESGIIGREGPAAQNDAP---GLNVEAVPVRYRE 117 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 VVAVLT HQ LAARR + LE AY CA DLL ML+EGTFP+ GD+AMSRSSPR GDG Sbjct 118 DVVAVLT-HQTALAARRTASPLEVAYLDCAGDLLIMLSEGTFPNVGDLAMSRSSPRVGDG 176 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLD G V +ASPNA+SAYHRMGLT +LEG NL+ TRPLISDPFEA E+ HV+D L Sbjct 177 FIRLDGAGNVVFASPNAISAYHRMGLTADLEGHNLVAVTRPLISDPFEAQELANHVRDSL 236 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AG G MRMEVDAGGA VLLRT+PLVV G VGAA+LIRDVTEVKRRDRAL+SKDATIRE Sbjct 237 AG-GSSMRMEVDAGGAAVLLRTMPLVVHGAAVGAAVLIRDVTEVKRRDRALLSKDATIRE 295 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+NAEGREAL+ESVRRVSSIA VHDALSMSVDE+VNLD Sbjct 296 IHHRVKNNLQTVAALLRLQARRTNNAEGREALMESVRRVSSIAQVHDALSMSVDEEVNLD 355 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EV+DRILPIMNDVASV PIRI R GDLGVLD+DRATALIMVITE+VQNAIEHAFD + A Sbjct 356 EVVDRILPIMNDVASVGPPIRIKREGDLGVLDADRATALIMVITEVVQNAIEHAFDASTA 415 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 +GSVTIRAERSARWLDVVVHDDG GLP GFSLEKSD LGLQIVRTLVSAELDGSLGM D Sbjct 416 QGSVTIRAERSARWLDVVVHDDGRGLPTGFSLEKSDRLGLQIVRTLVSAELDGSLGMHDV 475 Query 481 RERGTDVVLRVPVGRRGR 498 GTDVVLRVP+GRRGR Sbjct 476 PSGGTDVVLRVPIGRRGR 493 >gi|126434018|ref|YP_001069709.1| signal transduction histidine kinase [Mycobacterium sp. JLS] gi|126233818|gb|ABN97218.1| signal transduction histidine kinase [Mycobacterium sp. JLS] Length=496 Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/498 (79%), Positives = 424/498 (86%), Gaps = 5/498 (1%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPG+AVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQ RPN Sbjct 1 MSTLGDLLAEHTVLPGNAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQVRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T TV+ DAVGT +MPLV ATF G+ GREG Q ++ G +VE PVR+ + Sbjct 61 TAATVLLADAVGTTAIPETMPLVTATFESGIIGREGPAAQNDAP---GLNVEAVPVRYRE 117 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 VVAVLT HQ LAARR + LE AY CA DLL ML+EGTFP+ GD+AMSRSSPR GDG Sbjct 118 DVVAVLT-HQTALAARRTASPLEVAYLDCAGDLLIMLSEGTFPNVGDLAMSRSSPRVGDG 176 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLD G V +ASPNA+SAYHRMGLT +LEG NL+ TRPLISDPFEA E+ HV+D L Sbjct 177 FIRLDGAGNVVFASPNAISAYHRMGLTADLEGHNLVAVTRPLISDPFEAQELANHVRDSL 236 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AG G MRMEVDAGGA VLLRT+PLVV G VGAA+LIRDVTEVKRRDRAL+SKDATIRE Sbjct 237 AG-GSSMRMEVDAGGAAVLLRTMPLVVHGAAVGAAVLIRDVTEVKRRDRALLSKDATIRE 295 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+NAEGREAL+ESVRRVSSIA VHDALSMSVDE+VNLD Sbjct 296 IHHRVKNNLQTVAALLRLQARRTNNAEGREALMESVRRVSSIAQVHDALSMSVDEEVNLD 355 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EV+DRILPIMNDVASV PIRI R GDLGVLD+DRATALIMVITE+VQNAIEHAFD + A Sbjct 356 EVVDRILPIMNDVASVGPPIRIKREGDLGVLDADRATALIMVITEVVQNAIEHAFDASTA 415 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 +GSVTIRAERSARWLDVVVHDDG GLP GFSLEKSD LGLQIVRTLVSAELDGSLGM D Sbjct 416 QGSVTIRAERSARWLDVVVHDDGRGLPAGFSLEKSDRLGLQIVRTLVSAELDGSLGMHDV 475 Query 481 RERGTDVVLRVPVGRRGR 498 GTDVVLRVP+GRRGR Sbjct 476 PSGGTDVVLRVPIGRRGR 493 >gi|315445561|ref|YP_004078440.1| signal transduction histidine kinase [Mycobacterium sp. Spyr1] gi|315263864|gb|ADU00606.1| signal transduction histidine kinase [Mycobacterium sp. Spyr1] Length=496 Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/499 (78%), Positives = 424/499 (85%), Gaps = 6/499 (1%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHT+LPG+AVDHLHAVVGEWQLLADLSFADYLMWVRRDDG LVCVAQ RPN Sbjct 1 MSTLGDLLAEHTILPGNAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGHLVCVAQVRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PTV+ DAVGT+ A+ +P+VAA F G GR G+ + G +VE PVR G Sbjct 61 TAPTVLLADAVGTLAEADDIPIVAAAFRSGDIGRATVDGEFGAS---GLNVEAVPVRHGS 117 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 VVAVLT HQ LA R+ S LE AY CA DLL ML+EGTFP+ GD+AMSRSSPR GDG Sbjct 118 DVVAVLT-HQTSLAPRQASP-LEAAYVDCAGDLLHMLSEGTFPNVGDLAMSRSSPRVGDG 175 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLD GVV++ASPNA+SAYHRMGL+ ELEG NL+ TRPLI+D FEA E+ HV+D L Sbjct 176 FIRLDEAGVVTFASPNAISAYHRMGLSAELEGHNLVTVTRPLIADTFEAQELANHVRDSL 235 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AG G MRMEVDAGGATVLLRTLPL V G VGAA+LIRDVTEVKRRDRAL+SKDATIRE Sbjct 236 AG-GSSMRMEVDAGGATVLLRTLPLGVHGVGVGAAVLIRDVTEVKRRDRALLSKDATIRE 294 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+N EGREAL+ESVRRVSSIALVHDALSMSVDE+VNLD Sbjct 295 IHHRVKNNLQTVAALLRLQARRTNNPEGREALMESVRRVSSIALVHDALSMSVDEEVNLD 354 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVA+VD PIRINRVGDLGVLD+DRATAL MVITELVQNA+EHAFD Sbjct 355 EVIDRILPIMNDVAAVDSPIRINRVGDLGVLDADRATALTMVITELVQNAMEHAFDAETP 414 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 +G VTIRA+RSARWLDV+VHDDG GLP+GFSLEKSD LGLQIVRTLVSAELDGSLGM +A Sbjct 415 QGCVTIRAQRSARWLDVIVHDDGRGLPEGFSLEKSDRLGLQIVRTLVSAELDGSLGMHEA 474 Query 481 RERGTDVVLRVPVGRRGRL 499 E GTDVVLRVP+GRR R+ Sbjct 475 AEGGTDVVLRVPIGRRVRV 493 >gi|120402780|ref|YP_952609.1| signal transduction histidine kinase [Mycobacterium vanbaalenii PYR-1] gi|119955598|gb|ABM12603.1| signal transduction histidine kinase [Mycobacterium vanbaalenii PYR-1] Length=496 Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/498 (78%), Positives = 420/498 (85%), Gaps = 6/498 (1%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHTVLPG+AVDHLHAVVGEWQLLADLSFADYLMWVRRDDG+LVCVAQ RPN Sbjct 1 MSTLGDLLAEHTVLPGNAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGMLVCVAQVRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T TV+ DAVGT+ A +P+VA F G GR G+ S G +VE PVR+ + Sbjct 61 TAATVLLADAVGTLAEAEDLPIVAEAFQSGTIGRATVEGEFGS---PGLNVEAVPVRYRN 117 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 VVAVLT HQ LA R+ S LE AY CA DLL ML+EGTFP+ GD+AMSRSSPRAGDG Sbjct 118 DVVAVLT-HQTSLAPRQAS-PLEAAYVDCAGDLLHMLSEGTFPNVGDLAMSRSSPRAGDG 175 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLD GVV++ASPNA+SAYHRMGLT +LEG NL+ TRPLISDPFEA E+ HV+D L Sbjct 176 FIRLDEAGVVTFASPNAISAYHRMGLTADLEGHNLVSITRPLISDPFEAQELANHVRDSL 235 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 G G MRMEVDAGGATVLLRTLPL V G +GAA+LIRDVTEVKRRDRAL+SKDATIRE Sbjct 236 TG-GSSMRMEVDAGGATVLLRTLPLGVHGVAMGAAVLIRDVTEVKRRDRALLSKDATIRE 294 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+N EGREAL+ESVRRVSSIALVHDALSMSVDE+VNLD Sbjct 295 IHHRVKNNLQTVAALLRLQARRTNNPEGREALMESVRRVSSIALVHDALSMSVDEEVNLD 354 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 +VIDRILPIMNDVA+VD PIRINRVGDLGVLD+DRATALIMVITELVQNAIEHAFD Sbjct 355 QVIDRILPIMNDVAAVDSPIRINRVGDLGVLDADRATALIMVITELVQNAIEHAFDATTP 414 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 +G VTIRA+RSARWLDVVVHDDG GLP GFSLEKSD LGLQIVRTLVSAELDGSLGM Sbjct 415 QGCVTIRAQRSARWLDVVVHDDGRGLPDGFSLEKSDRLGLQIVRTLVSAELDGSLGMHAG 474 Query 481 RERGTDVVLRVPVGRRGR 498 GTDV+LRVP+GRR R Sbjct 475 AAGGTDVILRVPIGRRAR 492 >gi|145225264|ref|YP_001135942.1| signal transduction histidine kinase [Mycobacterium gilvum PYR-GCK] gi|145217750|gb|ABP47154.1| signal transduction histidine kinase [Mycobacterium gilvum PYR-GCK] Length=496 Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/499 (78%), Positives = 424/499 (85%), Gaps = 6/499 (1%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHT+LPG+AVDHLHAVVGEWQLLADLSFADYLMWVRRDDG LVCVAQ RPN Sbjct 1 MSTLGDLLAEHTILPGNAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGHLVCVAQVRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PTV+ DAVGT+ A+ +P+VAA F G GR G+ + G +VE PVR G Sbjct 61 TAPTVLLADAVGTLAEADDIPIVAAAFRSGDIGRATVDGEFGA---PGLNVEAVPVRHGS 117 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 VVAVLT HQ LA R+ S LE AY CA DLL ML+EGTFP+ GD+AMSRSSPR GDG Sbjct 118 DVVAVLT-HQTSLAPRQASP-LEAAYVDCAGDLLHMLSEGTFPNVGDLAMSRSSPRVGDG 175 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRLD GVV++ASPNA+SAYHRMGL+ ELEG NL+ TRPLI+D FEA E+ HV+D L Sbjct 176 FIRLDEAGVVTFASPNAISAYHRMGLSAELEGHNLVTVTRPLIADTFEAQELANHVRDSL 235 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AG G MRMEVDAGGATVLLRTLPL V G VGAA+LIRDVTEVKRRDRAL+SKDATIRE Sbjct 236 AG-GSSMRMEVDAGGATVLLRTLPLGVHGVGVGAAVLIRDVTEVKRRDRALLSKDATIRE 294 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRT+N EGREAL+ESVRRVSSIALVHDALSMSVDE+VNLD Sbjct 295 IHHRVKNNLQTVAALLRLQARRTNNPEGREALMESVRRVSSIALVHDALSMSVDEEVNLD 354 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 EVIDRILPIMNDVA+VD PIRINRVGDLGVLD+DRATAL MVITELVQNA+EHAFD Sbjct 355 EVIDRILPIMNDVAAVDSPIRINRVGDLGVLDADRATALTMVITELVQNAMEHAFDAETP 414 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 +G VTIRA+RSARWLDV+VHDDG GLP+GFSLEKSD LGLQIVRTLVSAELDGSLGM +A Sbjct 415 QGCVTIRAQRSARWLDVIVHDDGRGLPEGFSLEKSDRLGLQIVRTLVSAELDGSLGMHEA 474 Query 481 RERGTDVVLRVPVGRRGRL 499 E GTDVVLRVP+GRR R+ Sbjct 475 AEGGTDVVLRVPIGRRVRV 493 >gi|118468520|ref|YP_886284.1| sensor histidine kinase [Mycobacterium smegmatis str. MC2 155] gi|118169807|gb|ABK70703.1| sensor histidine kinase [Mycobacterium smegmatis str. MC2 155] Length=499 Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/498 (76%), Positives = 414/498 (84%), Gaps = 2/498 (0%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHT+LPGSAVDHLHAVVGEWQ+L+DLSFADYLMWVRRDDGVLVCVAQ RPN Sbjct 1 MSTLGDLLAEHTMLPGSAVDHLHAVVGEWQMLSDLSFADYLMWVRRDDGVLVCVAQIRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFGD 120 T PTV+ D+VG + + +P+V F G GR Q S G VE PVR Sbjct 61 TAPTVLLADSVGKLAGPDDLPVVTMAFESGAIGRGSDKAGQGSRTRPGLDVEAVPVRHQG 120 Query 121 QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG 180 QVVAVLT HQ LA RR + LE AY CA DLL MLAEGTFP+ GD+AMSRSSPR GDG Sbjct 121 QVVAVLT-HQTALAERRLTSPLEGAYLDCANDLLHMLAEGTFPNIGDLAMSRSSPRVGDG 179 Query 181 FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL 240 FIRL+ G V +ASPNA+SAYHRMGL +EL+G NL+ TRPLISDPFEA E+ H++D L Sbjct 180 FIRLNEGGEVVFASPNAISAYHRMGLNSELDGHNLVAITRPLISDPFEAQELANHIRDSL 239 Query 241 AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE 300 AG G MRMEVDA GA +LLRTLPLV G+++GAA+LIRDVTEVKRRDRAL+SKDATIRE Sbjct 240 AG-GSSMRMEVDANGAAILLRTLPLVAGGKSLGAAVLIRDVTEVKRRDRALLSKDATIRE 298 Query 301 IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD 360 IHHRVKNNLQTVAALLRLQARRTSN E REALIESVRRV+SIALVHDALSMSVDE+VNLD Sbjct 299 IHHRVKNNLQTVAALLRLQARRTSNEEAREALIESVRRVTSIALVHDALSMSVDEEVNLD 358 Query 361 EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA 420 +V+DRILPIMNDVASVD PIRINRVG+LGVLD+DRATALIMVITELVQNAIEHAFD Sbjct 359 QVVDRILPIMNDVASVDTPIRINRVGNLGVLDADRATALIMVITELVQNAIEHAFDAKTE 418 Query 421 EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA 480 +G VTI+AERSARWLDVVVHDDG GLP GFSLEKSD LGLQIVRTLV+AELDGSLGM D Sbjct 419 QGCVTIKAERSARWLDVVVHDDGRGLPVGFSLEKSDRLGLQIVRTLVTAELDGSLGMHDV 478 Query 481 RERGTDVVLRVPVGRRGR 498 GTDVVLRVP+GRR R Sbjct 479 PSGGTDVVLRVPIGRRSR 496 >gi|333991573|ref|YP_004524187.1| sensor kinase from two-component regulatory system [Mycobacterium sp. JDM601] gi|333487541|gb|AEF36933.1| sensor kinase from two-component regulatory system [Mycobacterium sp. JDM601] Length=495 Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/499 (75%), Positives = 404/499 (81%), Gaps = 13/499 (2%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRD---DGVLVCVAQC 57 MSTLGDLLAEHTVLPG+AVDHLHAVVGEWQLLADLSFADYLMWVRRD G LVCVAQC Sbjct 1 MSTLGDLLAEHTVLPGNAVDHLHAVVGEWQLLADLSFADYLMWVRRDADAGGALVCVAQC 60 Query 58 RPNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVR 117 RPNT PTV+ +DAVGTV AA+ MPLVA F G RE GQ+N+ E PVR Sbjct 61 RPNTAPTVLLSDAVGTVAAADWMPLVAGAFESGAIARESIAGQRNT--------EAVPVR 112 Query 118 FGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRA 177 D+VVAVLT HQ L A R LE AY CA DL+ ML+EGTFPD GD+A+SRSSPR Sbjct 113 HDDRVVAVLT-HQTALRAGREFSRLEAAYLDCAADLVHMLSEGTFPDVGDIAVSRSSPRV 171 Query 178 GDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQ 237 GDGFIRL VDG VSYASPNA+SAYHRMGL EL G +L+ TRPLISD FEAHE+ EH+ Sbjct 172 GDGFIRLGVDGTVSYASPNAVSAYHRMGLAAELAGHDLVAVTRPLISDTFEAHELAEHIA 231 Query 238 DLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDAT 297 D LAG G MR EVDA GA VLLRTLPL+V GR GAA+L+RDVTEVKRRDRAL+SKDAT Sbjct 232 DSLAG-GSSMRFEVDAAGAVVLLRTLPLIVHGRPAGAAVLVRDVTEVKRRDRALLSKDAT 290 Query 298 IREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQV 357 IREIHHRVKNNLQTVAALLRLQARRT + EGREAL+ESVRRVSSIA+VH+ALSMSVDE V Sbjct 291 IREIHHRVKNNLQTVAALLRLQARRTISTEGREALLESVRRVSSIAVVHEALSMSVDEVV 350 Query 358 NLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDP 417 NLDEVIDRILP+MNDVASV+ PI + R G LG LD+DRATAL MVITELVQNAIEHAFD Sbjct 351 NLDEVIDRILPMMNDVASVEIPIHVARTGTLGALDADRATALTMVITELVQNAIEHAFDA 410 Query 418 AAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGM 477 A VTIRAERSARWLDVVVHDDG GLP GFSLE +D LGLQIV TLVSAEL+GSL Sbjct 411 DADRHDVTIRAERSARWLDVVVHDDGHGLPAGFSLETADRLGLQIVNTLVSAELNGSLTA 470 Query 478 RDARERGTDVVLRVPVGRR 496 RDA GT++VLR+PVG R Sbjct 471 RDAPGGGTEMVLRIPVGSR 489 >gi|169630621|ref|YP_001704270.1| two component sensor kinase [Mycobacterium abscessus ATCC 19977] gi|169242588|emb|CAM63616.1| Probable two component sensor kinase [Mycobacterium abscessus] Length=496 Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/501 (73%), Positives = 404/501 (81%), Gaps = 7/501 (1%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTLGDLLAEHT+LPG AVDHLHAVV EWQLLADLSFADYLMWV RDD VCVAQCRPN Sbjct 1 MSTLGDLLAEHTMLPGDAVDHLHAVVAEWQLLADLSFADYLMWVHRDDDAFVCVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGH-SVEVSPVRFG 119 T PT++ DAVGT+ +PLV A F+ G RE + +H +VE PVR G Sbjct 61 TAPTIIDNDAVGTIAKIADVPLVEAAFASGAIERES---DSDLTEHASELNVEAVPVRCG 117 Query 120 DQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGD 179 D+ VAVLT HQ LA+R + G LE AY CA DLL ML EGTFP+ D AMSRSSPR GD Sbjct 118 DRTVAVLT-HQTALASRLKKGTLERAYLECAGDLLLMLTEGTFPNVADQAMSRSSPRVGD 176 Query 180 GFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDL 239 GFIRLDV G V YASPNALSAYHRMGL ++L+G NL+D T+PLISDPFE E+ H++D+ Sbjct 177 GFIRLDVSGGVKYASPNALSAYHRMGLASDLQGHNLMDVTKPLISDPFEGQELAAHIRDV 236 Query 240 LAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIR 299 LAG G MRMEVDAGGA VL+RTLPL+ G + GA +L RDVTEVKRRDRAL+SKDATIR Sbjct 237 LAG-GPSMRMEVDAGGAAVLIRTLPLIARGASEGALLLTRDVTEVKRRDRALLSKDATIR 295 Query 300 EIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNL 359 EIHHRVKNNLQTVAALLRLQARRT N E REAL ESVRRVSSIALVHDALSMSVDE+VNL Sbjct 296 EIHHRVKNNLQTVAALLRLQARRTPNDEAREALFESVRRVSSIALVHDALSMSVDEEVNL 355 Query 360 DEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAA 419 DEVIDRI+PIM DVA+VD +R++R G LGVLDSDRAT LIMVITELVQNAIEHAFD Sbjct 356 DEVIDRIMPIMTDVATVDTKVRVSREGALGVLDSDRATPLIMVITELVQNAIEHAFDE-G 414 Query 420 AEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRD 479 A+G V IRAERSARWLDVVVHDDG GLP+GFS+E SD LGLQIVRTLVSAE+DGSL MR Sbjct 415 AQGQVVIRAERSARWLDVVVHDDGRGLPEGFSVETSDRLGLQIVRTLVSAEIDGSLDMRS 474 Query 480 ARERGTDVVLRVPVGRRGRLM 500 E GT+ VLRVP+GRR RLM Sbjct 475 DPEGGTNAVLRVPLGRRARLM 495 >gi|111023307|ref|YP_706279.1| histidine kinase [Rhodococcus jostii RHA1] gi|110822837|gb|ABG98121.1| probable histidine kinase [Rhodococcus jostii RHA1] Length=500 Score = 590 bits (1521), Expect = 2e-166, Method: Compositional matrix adjust. Identities = 319/506 (64%), Positives = 380/506 (76%), Gaps = 18/506 (3%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDD------GVLVCV 54 MSTL DLLAEHT LPG AVDHL VVGEWQLLADLSFAD L+WV D G ++CV Sbjct 1 MSTLSDLLAEHTDLPGEAVDHLQRVVGEWQLLADLSFADVLLWVGTDSAATNPTGTVICV 60 Query 55 AQCRPNTGPTVVHTDAVGTVVAANSMPLV-AATFSGGVPGREGAVGQQNSCQHDGHSV-- 111 A CRP T T D VGTVV+ + P V A G V V ++ H G Sbjct 61 AHCRPTTASTAFPEDVVGTVVSESEHPQVLQALLEGRV------VRPEDGGGHAGLPPRR 114 Query 112 EVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMS 171 E PVR+ +V+AVL+R L+ +R LE AY CA DL +M+++GTFP + + Sbjct 115 EAVPVRWNGEVIAVLSRDT-NLSHQRAQSPLEVAYLDCAEDLCQMISDGTFPIREARSDT 173 Query 172 RSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHE 231 SSPRAGDGFIRLD DG V YASPNALSAYHRMGL+++L G NL TR L++DPFE+ E Sbjct 174 NSSPRAGDGFIRLDTDGRVVYASPNALSAYHRMGLSSDLIGQNLAATTRSLVTDPFESQE 233 Query 232 VDEHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRAL 291 V +++D +A D G RME++A GATVLLR L L G+ VGAA+++RDVTEVKRRDRAL Sbjct 234 VAGYIRDTIA-DKPGRRMEIEARGATVLLRALVLKPGGKRVGAAVVVRDVTEVKRRDRAL 292 Query 292 ISKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSM 351 +SKDATIREIHHRVKNNLQTVAALLRLQARRT+N E R+AL ESVRRV+SIALVHD LSM Sbjct 293 LSKDATIREIHHRVKNNLQTVAALLRLQARRTNNEEARQALSESVRRVTSIALVHDTLSM 352 Query 352 SVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAI 411 SVDE+VNLDEV+DR++PI++DVA+V PI++ R G GV ++RAT L+MV+TELVQNAI Sbjct 353 SVDEEVNLDEVVDRLVPILSDVATVSTPIKVRREGSFGVFSAERATPLVMVLTELVQNAI 412 Query 412 EHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAEL 471 EHAF+P A G+VT+RAERSARWLDVV+HDDG GLP GFSLE+SD LGLQIVRTLV+AEL Sbjct 413 EHAFEPGAP-GTVTMRAERSARWLDVVIHDDGRGLPPGFSLERSDRLGLQIVRTLVAAEL 471 Query 472 DGSLGMRDARERGTDVVLRVPVGRRG 497 +GSLG+ E GTD VLRVP+GRRG Sbjct 472 NGSLGLHPGPEGGTDAVLRVPLGRRG 497 >gi|226365814|ref|YP_002783597.1| two-component histidine kinase [Rhodococcus opacus B4] gi|226244304|dbj|BAH54652.1| putative two-component histidine kinase [Rhodococcus opacus B4] Length=500 Score = 589 bits (1518), Expect = 4e-166, Method: Compositional matrix adjust. Identities = 316/503 (63%), Positives = 377/503 (75%), Gaps = 12/503 (2%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDD------GVLVCV 54 MSTL DLLAE+T LPG AVDHL VVGEWQLLADLSFAD L+WV D G ++CV Sbjct 1 MSTLSDLLAEYTDLPGEAVDHLQRVVGEWQLLADLSFADVLLWVGADSASTDPTGTVICV 60 Query 55 AQCRPNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVS 114 A CRP T T D VGTVV+ + P V G R G G +V Sbjct 61 AHCRPTTASTAFPEDVVGTVVSESEHPQVLQALLEGNVVRPEDGGGHAGLPPRGEAV--- 117 Query 115 PVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSS 174 PVR+ +V+AVL+R L+ +R LE AY CA DL +M+++GTFP + + SS Sbjct 118 PVRWNGEVIAVLSRDT-NLSHQRAQSPLEVAYLDCAEDLCQMISDGTFPIREARSDTNSS 176 Query 175 PRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDE 234 PRAGDGFIRLD DG V YASPNALSAYHRMGL+++L G NL TR L++DPFE+ EV Sbjct 177 PRAGDGFIRLDTDGSVVYASPNALSAYHRMGLSSDLIGQNLAATTRSLVTDPFESQEVAG 236 Query 235 HVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISK 294 +++D +A D G RME++A GATVLLR L L G VGAA+++RDVTEVKRRDRAL+SK Sbjct 237 YIRDTIA-DKPGRRMEIEARGATVLLRALVLKPGGNRVGAAVVVRDVTEVKRRDRALLSK 295 Query 295 DATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVD 354 DATIREIHHRVKNNLQTVAALLRLQARRT+N E R+AL ESVRRV+SIALVHD LSMSVD Sbjct 296 DATIREIHHRVKNNLQTVAALLRLQARRTNNEEARQALSESVRRVTSIALVHDTLSMSVD 355 Query 355 EQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHA 414 E+VNLDEV+DR++PI++DVA+V PI++ R G GV ++RAT L+MV+TELVQNAIEHA Sbjct 356 EEVNLDEVVDRLVPILSDVATVSTPIKVRREGSFGVFSAERATPLVMVLTELVQNAIEHA 415 Query 415 FDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGS 474 F+P AA G+VT+RAERSARWLDVV+HD+G GLP GFSLE+SD LGLQIVRTLV+AEL+GS Sbjct 416 FEPGAA-GTVTMRAERSARWLDVVIHDNGRGLPPGFSLERSDRLGLQIVRTLVAAELNGS 474 Query 475 LGMRDARERGTDVVLRVPVGRRG 497 LG+ E GTD VLRVP+GRRG Sbjct 475 LGLHPGAEGGTDAVLRVPLGRRG 497 >gi|312140652|ref|YP_004007988.1| two component system sensor kinase [Rhodococcus equi 103S] gi|325675719|ref|ZP_08155403.1| sensor histidine kinase [Rhodococcus equi ATCC 33707] gi|311889991|emb|CBH49309.1| two component system sensor kinase [Rhodococcus equi 103S] gi|325553690|gb|EGD23368.1| sensor histidine kinase [Rhodococcus equi ATCC 33707] Length=503 Score = 577 bits (1487), Expect = 2e-162, Method: Compositional matrix adjust. Identities = 319/518 (62%), Positives = 375/518 (73%), Gaps = 41/518 (7%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRD---------DGVL 51 MSTL DLLAEHT LPG+AVDHL VVGEWQLLADLSFAD L+WV + G + Sbjct 1 MSTLSDLLAEHTDLPGNAVDHLQQVVGEWQLLADLSFADVLLWVATERPEGTDGAMPGTV 60 Query 52 VCVAQCRPNTGPTVVHTDAVGTVVAANSMPLVAA-------------TFSGGVPGREGAV 98 VCVAQCRP T T DAVG+VV+ + P V T+ GG P R AV Sbjct 61 VCVAQCRPTTASTAFPDDAVGSVVSESEHPQVLRALVEGEIVSEVDRTWRGGTPLRREAV 120 Query 99 GQQNSCQHDGHSVEVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLA 158 PVR +V+AVL+R LA +R LE AY CA DL +M++ Sbjct 121 ----------------PVRCDGEVIAVLSRDT-NLAQQRAQSPLEIAYLDCAADLCQMIS 163 Query 159 EGTFPDAGDVAMSRSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDA 218 EGTFP+ + + SSPRAGDGFIRLD G V Y+SPNALSAYHRMGL T+L G +L Sbjct 164 EGTFPNPETRSDTNSSPRAGDGFIRLDPAGRVVYSSPNALSAYHRMGLNTDLVGKDLAST 223 Query 219 TRPLISDPFEAHEVDEHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILI 278 TR LI+DPFE+ EV +++ L G G RME++A GATVLLR L L G+ VGAA++I Sbjct 224 TRSLINDPFESQEVADYISGTLGGR-LGHRMEIEARGATVLLRALVLKPRGQVVGAAVVI 282 Query 279 RDVTEVKRRDRALISKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRR 338 RDVTEVKRRDRAL+SKDATIREIHHRVKNNLQTVAALLRLQARRT N E R+AL ESVRR Sbjct 283 RDVTEVKRRDRALLSKDATIREIHHRVKNNLQTVAALLRLQARRTENEEARQALSESVRR 342 Query 339 VSSIALVHDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATA 398 V+SIALVHDALSMSVDE+V+LDEV+D ++PI+ DVASV+ PI+I R G LGV ++RAT Sbjct 343 VTSIALVHDALSMSVDEEVDLDEVVDSLVPILADVASVNMPIKIEREGSLGVFSAERATP 402 Query 399 LIMVITELVQNAIEHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSL 458 L+MV+TELVQNAIEHAF+P + G+V +RA+RSARWLDVV+HDDG GLP GFSLEKSD L Sbjct 403 LVMVLTELVQNAIEHAFEPGES-GTVYLRADRSARWLDVVIHDDGRGLPPGFSLEKSDRL 461 Query 459 GLQIVRTLVSAELDGSLGMRDARERGTDVVLRVPVGRR 496 GLQIVRTLV AEL GSLG+ + + GTD VLRVP+GRR Sbjct 462 GLQIVRTLVGAELGGSLGLHPSPDGGTDAVLRVPLGRR 499 >gi|229489533|ref|ZP_04383396.1| sensor histidine kinase [Rhodococcus erythropolis SK121] gi|229323630|gb|EEN89388.1| sensor histidine kinase [Rhodococcus erythropolis SK121] Length=500 Score = 570 bits (1470), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 310/504 (62%), Positives = 372/504 (74%), Gaps = 16/504 (3%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWV------RRDDGVLVCV 54 MSTL DLLAEHT LPG+AVDHL VVGEWQLLADLSFAD L+WV R +G ++CV Sbjct 1 MSTLSDLLAEHTDLPGAAVDHLQRVVGEWQLLADLSFADVLLWVGTESEKNRSEGTVICV 60 Query 55 AQCRPNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSV--E 112 A CRP T T DAVGTVV+ + P V V GR V ++ +G E Sbjct 61 AHCRPTTASTAFPEDAVGTVVSESEHPQVLRAL---VEGR--VVRGEDETWREGMPPRRE 115 Query 113 VSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSR 172 PVR +V+AVL+R L+ +R LE AY CA DL +M+++GTFP + + Sbjct 116 AVPVRLDGRVIAVLSR-DTNLSHQRAQSPLELAYLDCAEDLCQMISDGTFPIRESRSDTN 174 Query 173 SSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEV 232 SSPRAGDGFIRLD +G V YASPNALSAYHRMGL+++L G +L TR L++DPFE+ E Sbjct 175 SSPRAGDGFIRLDTEGTVVYASPNALSAYHRMGLSSDLVGQDLAALTRSLVTDPFESQEA 234 Query 233 DEHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALI 292 +++D LA D G RME++A GATVLLR L L GR+VGAA+++RDVTEVKRRDRAL+ Sbjct 235 AGYIRDTLA-DKPGRRMEIEARGATVLLRALVLKPGGRHVGAAVVVRDVTEVKRRDRALL 293 Query 293 SKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMS 352 SKDATIREIHHRVKNNLQTVAALLRLQARRT N E R+AL ESVRRV+SIALVHD LSMS Sbjct 294 SKDATIREIHHRVKNNLQTVAALLRLQARRTGNDEARQALTESVRRVTSIALVHDTLSMS 353 Query 353 VDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIE 412 VDE+V+LDEVIDR++P+++DVA V P+ I R G GV ++RAT L+MV+TELVQNAIE Sbjct 354 VDEEVDLDEVIDRLVPMLSDVAGVGVPVTIRREGSFGVFSAERATPLVMVLTELVQNAIE 413 Query 413 HAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELD 472 HAFDP G+VT+ AERSARWLDV++HD+G GLP+ F LEKSD LGLQIVRTL+ AEL Sbjct 414 HAFDPGVT-GTVTLSAERSARWLDVIIHDNGRGLPENFDLEKSDRLGLQIVRTLLGAELG 472 Query 473 GSLGMRDARERGTDVVLRVPVGRR 496 GSLG+ GTD VLRVP+GRR Sbjct 473 GSLGLHPGSGGGTDAVLRVPLGRR 496 >gi|226305676|ref|YP_002765636.1| two-component histidine kinase [Rhodococcus erythropolis PR4] gi|226184793|dbj|BAH32897.1| putative two-component histidine kinase [Rhodococcus erythropolis PR4] Length=500 Score = 570 bits (1470), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 310/504 (62%), Positives = 372/504 (74%), Gaps = 16/504 (3%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWV------RRDDGVLVCV 54 MSTL DLLAEHT LPG+AVDHL VVGEWQLLADLSFAD L+WV R +G ++CV Sbjct 1 MSTLSDLLAEHTDLPGAAVDHLQRVVGEWQLLADLSFADVLLWVGTESEKNRSEGTVICV 60 Query 55 AQCRPNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSV--E 112 A CRP T T DAVGTVV+ + P V V GR V ++ +G E Sbjct 61 AHCRPTTASTAFPEDAVGTVVSESEHPQVLRAL---VEGR--VVRGEDETWREGMPPRRE 115 Query 113 VSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSR 172 PVR +V+AVL+R L+ +R LE AY CA DL +M+++GTFP + + Sbjct 116 AVPVRLDGRVIAVLSR-DTNLSHQRAQSPLELAYLDCAEDLCQMISDGTFPIRESRSDTN 174 Query 173 SSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEV 232 SSPRAGDGFIRLD +G V YASPNALSAYHRMGL+++L G +L TR L++DPFE+ E Sbjct 175 SSPRAGDGFIRLDTEGTVVYASPNALSAYHRMGLSSDLVGQDLAALTRSLVTDPFESQEA 234 Query 233 DEHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALI 292 +++D LA D G RME++A GATVLLR L L GR+VGAA+++RDVTEVKRRDRAL+ Sbjct 235 AGYIRDTLA-DKPGRRMEIEARGATVLLRALVLKPGGRHVGAAVVVRDVTEVKRRDRALL 293 Query 293 SKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMS 352 SKDATIREIHHRVKNNLQTVAALLRLQARRT N E R+AL ESVRRV+SIALVHD LSMS Sbjct 294 SKDATIREIHHRVKNNLQTVAALLRLQARRTGNDEARQALTESVRRVTSIALVHDTLSMS 353 Query 353 VDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIE 412 VDE+V+LDEVIDR++P+++DVA V P+ I R G GV ++RAT L+MV+TELVQNAIE Sbjct 354 VDEEVDLDEVIDRLVPMLSDVAGVGVPVAIRREGSFGVFSAERATPLVMVLTELVQNAIE 413 Query 413 HAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELD 472 HAFDP G+VT+ AERSARWLDV++HD+G GLP+ F LEKSD LGLQIVRTL+ AEL Sbjct 414 HAFDPGVT-GTVTLSAERSARWLDVIIHDNGRGLPENFDLEKSDRLGLQIVRTLLGAELG 472 Query 473 GSLGMRDARERGTDVVLRVPVGRR 496 GSLG+ GTD VLRVP+GRR Sbjct 473 GSLGLHPGSGGGTDAVLRVPLGRR 496 >gi|54026554|ref|YP_120796.1| putative two-component system sensor kinase [Nocardia farcinica IFM 10152] gi|54018062|dbj|BAD59432.1| putative two-component system sensor kinase [Nocardia farcinica IFM 10152] Length=504 Score = 570 bits (1468), Expect = 3e-160, Method: Compositional matrix adjust. Identities = 318/504 (64%), Positives = 371/504 (74%), Gaps = 11/504 (2%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVR----RDDGVLVCVAQ 56 M+TL +LLAEHT LPG AVDHL VVG+WQLLADLSFAD L+WV D +VCVAQ Sbjct 1 MATLSELLAEHTDLPGLAVDHLQRVVGDWQLLADLSFADLLLWVGAGPVEDGADIVCVAQ 60 Query 57 CRPNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDG--HSV-EV 113 CRP T TV D VGTV + P V G R + G+ H H+V E Sbjct 61 CRPTTAATVHVEDMVGTVASRADHPQVFEALLTGKVVRADSAGEATGVYHPHPVHAVREA 120 Query 114 SPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRS 173 PVR GD V+AVL+R +R RS LE AY CA DL +M+AEGTFP D A + S Sbjct 121 VPVRCGDNVIAVLSRDTDMQRSRVRST-LEIAYVACADDLCQMIAEGTFPTPEDRAATHS 179 Query 174 SPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVD 233 SPRAGDGFIRLD +G+V YASPNALSAYHRMGL ++L G +L + TR LI+DPF+A EV Sbjct 180 SPRAGDGFIRLDTEGIVVYASPNALSAYHRMGLQSDLAGQDLAETTRSLITDPFDAQEVV 239 Query 234 EHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALIS 293 +Q LAG G RMEV+A GATVLLRTL L G+ GAA+L+RDVTEVKRRDRAL+S Sbjct 240 GDIQAALAGR-TGRRMEVEARGATVLLRTLVLRPHGKLAGAAVLVRDVTEVKRRDRALLS 298 Query 294 KDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSV 353 KDATIREIHHRVKNNLQTVAALLRLQARRT N E + AL ESVRRV+SIA VH+ LSMSV Sbjct 299 KDATIREIHHRVKNNLQTVAALLRLQARRTENEEAQVALTESVRRVTSIASVHEMLSMSV 358 Query 354 DEQVNLDEVIDRILPIMNDVASVDRP-IRINRVGDLGVLDSDRATALIMVITELVQNAIE 412 DE+V+LDEV+DR+LPIM DVA+V I++ R G LGV ++RAT L+MV+TELVQNAIE Sbjct 359 DEEVDLDEVVDRLLPIMADVATVHTTRIKVRRAGSLGVFSAERATPLVMVLTELVQNAIE 418 Query 413 HAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELD 472 HAFD + G+VTIR+ERSARWLDV++ DDG GLP GFSLE SD LGLQIVRTLV+AEL Sbjct 419 HAFD-SGQTGTVTIRSERSARWLDVIISDDGRGLPPGFSLEASDRLGLQIVRTLVTAELG 477 Query 473 GSLGMRDARERGTDVVLRVPVGRR 496 GS+G+ + GTD VLRVP+GRR Sbjct 478 GSIGLHPGADVGTDAVLRVPLGRR 501 >gi|333921431|ref|YP_004495012.1| putative two-component histidine kinase [Amycolicicoccus subflavus DQS3-9A1] gi|333483652|gb|AEF42212.1| Putative two-component histidine kinase [Amycolicicoccus subflavus DQS3-9A1] Length=518 Score = 561 bits (1446), Expect = 9e-158, Method: Compositional matrix adjust. Identities = 310/524 (60%), Positives = 370/524 (71%), Gaps = 36/524 (6%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDD------------ 48 MSTL LLAEHT LPG AV+HL +VGEWQL+ADLSF+D LMWV D Sbjct 1 MSTLSALLAEHTDLPGDAVNHLQRLVGEWQLVADLSFSDVLMWVATGDLDDAEGQDDLAG 60 Query 49 GVLVCVAQCRPNTGPTVVHTDAVGTVVAANSMP-LVAATFSGGVPGREGAVGQQNSCQHD 107 VCVAQCRP T PTV D VG+ V P LVAA G + + + ++ Sbjct 61 AKAVCVAQCRPTTSPTVYSHDRVGSSVDWADHPELVAAMLRGEI------LREDTPRWYE 114 Query 108 GHSV--EVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDA 165 G + E PVR G Q++AVLTR LA R LE AY C+ DL +M+ +G+FP Sbjct 115 GTPLAREAIPVRSGGQIIAVLTRDT-SLAQLRVPSALEMAYIACSADLCQMICDGSFPLR 173 Query 166 GDVAMSRSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISD 225 D+ +SSPRAGDG IR+DV+G V+YASPNALSA+HRMGL+TE+ G NL TRPLISD Sbjct 174 EDLVGIQSSPRAGDGLIRIDVEGTVAYASPNALSAFHRMGLSTEIAGQNLSAVTRPLISD 233 Query 226 PFEAHEVDEHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVK 285 PF+A E +Q + A + MRME+DA GATVL R LPL GA +L+RD+TEVK Sbjct 234 PFDAQEFGVRLQAVTARESS-MRMEIDARGATVLFRALPLYPQLEPAGALVLVRDITEVK 292 Query 286 RRDRALISKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALV 345 RRDRAL+SKDATIREIHHRVKNNLQTVAALLRLQ RRT+N E R+AL ESVRRVSSIALV Sbjct 293 RRDRALLSKDATIREIHHRVKNNLQTVAALLRLQVRRTTNEEARQALAESVRRVSSIALV 352 Query 346 HDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITE 405 HD LSMSVDEQVNLD+VIDR++P+M DVA+V PI + R G LGV+ +D+AT L+MV+TE Sbjct 353 HDTLSMSVDEQVNLDDVIDRLVPMMVDVATVGMPIAVRREGSLGVMPADKATPLVMVLTE 412 Query 406 LVQNAIEHAFDPAAAE-------------GSVTIRAERSARWLDVVVHDDGLGLPQGFSL 452 LVQNAIEHAF+ E G + +RAERSARWLDVV+HD+G GLP+GFSL Sbjct 413 LVQNAIEHAFNLGVPEDLESVDSSDRDVPGEIVLRAERSARWLDVVIHDNGNGLPEGFSL 472 Query 453 EKSDSLGLQIVRTLVSAELDGSLGMRDARERGTDVVLRVPVGRR 496 E+SD LGLQIVRTLV+AEL GSLG+ ++ GTD VLRVP+GRR Sbjct 473 ERSDRLGLQIVRTLVAAELGGSLGLHESEAGGTDAVLRVPLGRR 516 >gi|300789788|ref|YP_003770079.1| two-component system sensor kinase [Amycolatopsis mediterranei U32] gi|299799302|gb|ADJ49677.1| two-component system sensor kinase [Amycolatopsis mediterranei U32] gi|340531456|gb|AEK46661.1| two-component system sensor kinase [Amycolatopsis mediterranei S699] Length=506 Score = 488 bits (1257), Expect = 9e-136, Method: Compositional matrix adjust. Identities = 284/520 (55%), Positives = 347/520 (67%), Gaps = 39/520 (7%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWV------RRDDGVLVCV 54 MSTL +LLA++T LPG A DHL VV EWQLLADLSFAD+L+WV + D G VCV Sbjct 1 MSTLAELLADNTGLPGEAADHLQTVVAEWQLLADLSFADFLLWVPVTEDLQPDGGDFVCV 60 Query 55 AQCRPNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSC-QHDGHSV-- 111 A RP T PT D VGT P +A A+ + C + D H Sbjct 61 AHARPTTAPTAHPEDVVGTRFTVQEHPQLAK-----------AMREVRICREEDPHWYRD 109 Query 112 -----EVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAG 166 E PVRF D+VVAV++R + LAA R LE AY A DL +M+ +GTFP G Sbjct 110 LPMRREAIPVRFHDEVVAVMSR-ETNLAAPRVPSPLEIAYLGSAGDLCQMIVDGTFPPNG 168 Query 167 DVAM-SRSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISD 225 A + +SPR GDG IRLD G V +ASPN LSAYHRMG ++L G L TR LI D Sbjct 169 TNATDTHTSPRVGDGLIRLDSSGTVVFASPNGLSAYHRMGHESDLVGTRLAPLTRSLIRD 228 Query 226 PFEAHEVDEHVQDLLAGDGK-GMRMEVDAG-GATVLLRTLPLVVAGRNVGAAILIRDVTE 283 PF+A EV + + L DGK R E D+ GA VL R LPL AG+ GA +L+RDVTE Sbjct 229 PFDATEVSHRIIEAL--DGKPSSRTEADSRRGAVVLFRALPLRPAGQAAGALVLVRDVTE 286 Query 284 VKRRDRALISKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIA 343 VKRRDRAL+SKDATIREIHHRVKNNLQTVAALLRLQ+RRTS+ E R AL ESVRRV+SIA Sbjct 287 VKRRDRALLSKDATIREIHHRVKNNLQTVAALLRLQSRRTSSEEARLALAESVRRVTSIA 346 Query 344 LVHDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVI 403 LVH+ALS+SVDE+V+LD+++D +LP++ +VA+ + + ++R G GV+ ++ AT L+MV+ Sbjct 347 LVHEALSISVDERVDLDKLLDNVLPMVGEVATAESQVGLSRKGSFGVVVAEIATPLVMVL 406 Query 404 TELVQNAIEHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIV 463 ELVQNAIEHAF PA G V + ERSARWLDVV+ D+G GLP GFSLE+SD LGLQIV Sbjct 407 AELVQNAIEHAF-PAGRSGKVELIVERSARWLDVVIRDNGRGLPAGFSLERSDGLGLQIV 465 Query 464 RTLVSAELDGSLGMRDARER-------GTDVVLRVPVGRR 496 RTLV +EL GSL +R R GT+ LR+P+ RR Sbjct 466 RTLVESELRGSLSLRKVRPETSATRVTGTEAALRIPLSRR 505 >gi|134102861|ref|YP_001108522.1| putative two-component system sensor kinase [Saccharopolyspora erythraea NRRL 2338] gi|291008747|ref|ZP_06566720.1| putative two-component system sensor kinase [Saccharopolyspora erythraea NRRL 2338] gi|133915484|emb|CAM05597.1| putative two-component system sensor kinase [Saccharopolyspora erythraea NRRL 2338] Length=497 Score = 484 bits (1246), Expect = 1e-134, Method: Compositional matrix adjust. Identities = 284/504 (57%), Positives = 350/504 (70%), Gaps = 16/504 (3%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVR-----RDDGVLVCVA 55 MSTL DLLAEHT L G+A DHL VV EWQLL+DLSFAD+LMWV + +CVA Sbjct 1 MSTLSDLLAEHTGLSGAAADHLQLVVAEWQLLSDLSFADFLMWVPIGPPDAAESRFLCVA 60 Query 56 QCRPNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSV--EV 113 Q RP T PT D VG+ V + P + G RE ++ H G V E Sbjct 61 QARPTTAPTAHPEDVVGSEVTQDEHPQLRRAAVEGRICRE-----EDPRWHLGVPVRRET 115 Query 114 SPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRS 173 PV+ G ++VAVL+R LA R LE +Y A DL +M+A+GTFP + Sbjct 116 IPVKLGREIVAVLSRDT-NLAVPRVPSPLEISYLGSAADLCQMVADGTFPTPEPSPDVHT 174 Query 174 SPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVD 233 SPR GDG IRLD G V +ASPNALSAYHRMG ++L G L TR L++DPF+A EV Sbjct 175 SPRVGDGLIRLDASGSVVFASPNALSAYHRMGHASDLVGAQLAPLTRSLLTDPFDADEVS 234 Query 234 EHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALIS 293 + ++ G MRME DA GATVL R LPL G+ GA +L+RDVTEVKRRDRAL+S Sbjct 235 QRIRRANGGQ-PSMRMEADARGATVLFRALPLHPRGQQAGALVLVRDVTEVKRRDRALLS 293 Query 294 KDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSV 353 KDATIREIHHRVKNNLQTVAALLRLQ+RRT N+E R AL ESVRRV+SIALVH+ LSMSV Sbjct 294 KDATIREIHHRVKNNLQTVAALLRLQSRRTGNSEARLALEESVRRVTSIALVHETLSMSV 353 Query 354 DEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEH 413 DE+V+LD+V+DR++P+M+DVA+ + +++ R G GV+ ++ AT L+MV+TELVQNA EH Sbjct 354 DERVDLDDVVDRVIPMMSDVAAAETGVKVRRDGRFGVVSAELATPLVMVLTELVQNAFEH 413 Query 414 AFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDG 473 AF P G V ++AERSARWLDVV+ DDG GLP+GFSLE+++ LGLQIVRTLV +EL G Sbjct 414 AF-PEGQGGEVVVQAERSARWLDVVISDDGRGLPKGFSLERAERLGLQIVRTLVESELRG 472 Query 474 SLGMRD-ARERGTDVVLRVPVGRR 496 SL +R R+RGT+ VLRVP+ R Sbjct 473 SLSLRGRGRQRGTEAVLRVPLKYR 496 >gi|302529993|ref|ZP_07282335.1| histidine kinase [Streptomyces sp. AA4] gi|302438888|gb|EFL10704.1| histidine kinase [Streptomyces sp. AA4] Length=506 Score = 483 bits (1242), Expect = 4e-134, Method: Compositional matrix adjust. Identities = 280/520 (54%), Positives = 346/520 (67%), Gaps = 39/520 (7%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWV------RRDDGVLVCV 54 MSTL DLLAE+T LPG A DHL VV EWQLLADLSFAD+L+WV + D G VCV Sbjct 1 MSTLSDLLAENTGLPGEAADHLQTVVAEWQLLADLSFADFLLWVPVSAEHQPDGGDFVCV 60 Query 55 AQCRPNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSC-QHDGHSV-- 111 A RP T PT D VGT + P +A A+ + C + D H Sbjct 61 AHARPTTAPTAHPEDVVGTRFTVDEHPQLAK-----------AMREVKICREEDPHWYRD 109 Query 112 -----EVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAG 166 E PV FG +V+AVL+R + LAA R LE AY A DL +M+ +GTFP AG Sbjct 110 LPMRREAVPVSFGGEVIAVLSR-ETNLAAPRVPSPLEIAYLGSAGDLCQMIVDGTFPPAG 168 Query 167 -DVAMSRSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISD 225 + + +SPR GDG +RLD G V +ASPN LSAYHRMG ++L G L TR LI D Sbjct 169 GNQTDTHTSPRVGDGLVRLDQAGTVVFASPNGLSAYHRMGHESDLVGQRLAPLTRSLIRD 228 Query 226 PFEAHEVDEHVQDLLAGDGK-GMRMEVDAG-GATVLLRTLPLVVAGRNVGAAILIRDVTE 283 PF+A EV + + L DGK R E D+ GA VL R LPL AG+ GA +L+RDVTE Sbjct 229 PFDATEVSHRIIEAL--DGKPSTRTEADSKRGAVVLFRALPLRPAGQPAGALVLVRDVTE 286 Query 284 VKRRDRALISKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIA 343 VKRRDRAL+SKDATIREIHHRVKNNLQTVAALLRLQ+RRT++ E R AL ESVRRVSSIA Sbjct 287 VKRRDRALMSKDATIREIHHRVKNNLQTVAALLRLQSRRTTSEEARLALGESVRRVSSIA 346 Query 344 LVHDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVI 403 +VH+ALS+SVDE+V+LD+++D +LP++ +VA+ + + + R G GV+ ++ AT L+MV+ Sbjct 347 MVHEALSISVDERVDLDKLLDNVLPMVGEVATAESKVGMTRKGSFGVVVAEIATPLVMVL 406 Query 404 TELVQNAIEHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIV 463 ELVQNAIEHAF P G V + ERSARWLD+++ D+G GLP GFSLE+SD LGLQIV Sbjct 407 AELVQNAIEHAF-PQGRPGKVELIVERSARWLDILIRDNGRGLPSGFSLERSDGLGLQIV 465 Query 464 RTLVSAELDGSLGMRDARE-------RGTDVVLRVPVGRR 496 RTLV +EL GSL +R R GT+ LR+P+ RR Sbjct 466 RTLVESELRGSLSLRQVRTDEAGNRVPGTEAALRIPLSRR 505 >gi|256380280|ref|YP_003103940.1| signal transduction histidine kinase [Actinosynnema mirum DSM 43827] gi|255924583|gb|ACU40094.1| signal transduction histidine kinase [Actinosynnema mirum DSM 43827] Length=492 Score = 482 bits (1241), Expect = 6e-134, Method: Compositional matrix adjust. Identities = 279/499 (56%), Positives = 346/499 (70%), Gaps = 11/499 (2%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTL DLLAEHT L G A DHL VV EWQLL+DLSFAD+LMWV DDG +CVAQ RP Sbjct 1 MSTLTDLLAEHTKLSGVAADHLQLVVAEWQLLSDLSFADFLMWVPLDDGTFLCVAQARPT 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSV--EVSPVRF 118 T PT D VG+ V + P + + RE ++ H G V E PVR Sbjct 61 TAPTAHPEDVVGSTVPVDEHPQLRRAIAEVRICRE-----EDPRWHLGVPVRREAIPVRL 115 Query 119 GDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAG 178 G +V+AVL+R+ LA R LE +Y A DL +M+A+GTFP +SPR G Sbjct 116 GSEVIAVLSRNT-NLAVPRVPSPLEISYLGSAADLCQMIADGTFPTTEPSPDVHTSPRVG 174 Query 179 DGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQD 238 DG +RLD G V +ASPNALSAYHRMG +L GV+L TR LI DPF+A EV + ++ Sbjct 175 DGLVRLDSSGAVVFASPNALSAYHRMGHAADLIGVHLAPLTRSLIGDPFDATEVAQRIRA 234 Query 239 LLAGDGKGMRMEVDAG-GATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDAT 297 L G MR+E ++ GA VL R LPL G GA +L RDVTEV+RRDRAL+SKDAT Sbjct 235 ALDGQ-PSMRIEAESRRGAAVLFRALPLRPRGSAAGALVLCRDVTEVRRRDRALMSKDAT 293 Query 298 IREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQV 357 IREIHHRVKNNLQTVAALLRLQ+RRTS+ E REAL ESVRRV+SIALVH+ LSMSVDE+V Sbjct 294 IREIHHRVKNNLQTVAALLRLQSRRTSSEEAREALAESVRRVTSIALVHETLSMSVDERV 353 Query 358 NLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDP 417 +LD+V+D+++P+M+DVA+ + + + R G G++ ++ AT L+MV+TELVQNA EHA+ P Sbjct 354 DLDDVVDKVIPMMSDVAATESQVVVRRDGKFGIVQAELATPLVMVLTELVQNAFEHAYSP 413 Query 418 AAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGM 477 G V + +ERSA+WLDV++ DDG GLPQGFSLE++D LGLQIVRTLV +EL GSL + Sbjct 414 -GQRGEVVVHSERSAKWLDVLICDDGRGLPQGFSLERTDRLGLQIVRTLVESELRGSLSL 472 Query 478 RDARERGTDVVLRVPVGRR 496 R GT+ VLRVP+ R Sbjct 473 RRRPRGGTEAVLRVPLRAR 491 >gi|257057041|ref|YP_003134873.1| signal transduction histidine kinase [Saccharomonospora viridis DSM 43017] gi|256586913|gb|ACU98046.1| signal transduction histidine kinase [Saccharomonospora viridis DSM 43017] Length=512 Score = 476 bits (1226), Expect = 3e-132, Method: Compositional matrix adjust. Identities = 271/519 (53%), Positives = 341/519 (66%), Gaps = 31/519 (5%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGV--LVCVAQCR 58 MSTL +LLA+HT LPG +VDHL VV EWQLLADLSF+D+LMWV ++G VCVAQ R Sbjct 1 MSTLVELLADHTGLPGESVDHLQRVVAEWQLLADLSFSDFLMWVPVEEGADEFVCVAQVR 60 Query 59 PNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHD-GHSVEVSPVR 117 P TGPT D VGT ++ P + RE ++ D E PVR Sbjct 61 PTTGPTAHPEDVVGTRFTSDEHPQLCRAMREVRICRE----EEPHWYRDLPMRREAIPVR 116 Query 118 FGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRA 177 GD V+AVL+R + LA R +E AY A DL +M+ +GTFP +SPR Sbjct 117 LGDSVIAVLSR-ETNLATPRVPSPMEIAYLGSAADLCQMITDGTFPCPEVDTGVHTSPRV 175 Query 178 GDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQ 237 GDG +R+D G V +ASPN SAYHRMG ++L G L+ TR L+ DPF+A +V H+Q Sbjct 176 GDGLVRVDQSGTVVFASPNGQSAYHRMGYESDLVGTRLVPLTRSLVRDPFDAADVAHHIQ 235 Query 238 DLLAGDGK-GMRMEVDA-GGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKD 295 D + DGK G R EV+ GA VL R LPL AGR GA IL+RDVTEVKR DRAL+SKD Sbjct 236 DAI--DGKPGTRTEVETLPGAVVLFRALPLRPAGRAAGALILVRDVTEVKRLDRALLSKD 293 Query 296 ATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDE 355 ATIREIHHRVKNNLQTVAALLRLQ+RRT + E ++AL ESVRRVSSIA+VH+ALSMSVDE Sbjct 294 ATIREIHHRVKNNLQTVAALLRLQSRRTQSTEAKQALTESVRRVSSIAMVHEALSMSVDE 353 Query 356 QVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAF 415 +V+LD + D++LP++ +VA+ + +R++R G G + ++ AT L+MV+ ELVQNA+EHAF Sbjct 354 RVDLDSLFDKVLPMVGEVATAEAQVRVSRTGSFGEVAAEIATPLVMVVAELVQNAVEHAF 413 Query 416 DPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSL 475 +G V I ERSARWLDV V D+G GLP FSL+++D LGLQI RTLV +EL GSL Sbjct 414 S-GGRQGQVNIVVERSARWLDVFVRDNGKGLPPDFSLDRADGLGLQIARTLVESELRGSL 472 Query 476 GMRDARE------------------RGTDVVLRVPVGRR 496 +R E GT+ +R+P+ RR Sbjct 473 TLRGRPEDDEAVDDVSADNGNGEKASGTEAAVRIPLSRR 511 >gi|296138837|ref|YP_003646080.1| signal transduction histidine kinase [Tsukamurella paurometabola DSM 20162] gi|296026971|gb|ADG77741.1| signal transduction histidine kinase [Tsukamurella paurometabola DSM 20162] Length=501 Score = 467 bits (1202), Expect = 2e-129, Method: Compositional matrix adjust. Identities = 269/504 (54%), Positives = 332/504 (66%), Gaps = 17/504 (3%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRD-------DGVLVC 53 M++L DLLA HT LPG A HL +V EWQLLADLSFAD +WVR D + VC Sbjct 1 MASLADLLAIHTDLPGRAARHLQRIVAEWQLLADLSFADLRLWVREDPDESESAEPGYVC 60 Query 54 VAQCRPNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEV 113 +AQCRPNT PTV + D VG V P + A + G V R + +V Sbjct 61 IAQCRPNTTPTVYNDDGVGVTVEPWQAPTLHAAYEGAVLVRGVTPTWTGPVRVRRQAV-- 118 Query 114 SPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRS 173 PV +G +V+AVLTR + R LE AY CA DL +M+AEG FP+ D + Sbjct 119 -PVLWGGEVMAVLTRDF-NVTHPRTPSPLEVAYTECADDLCKMVAEGAFPEPEDHPTGEA 176 Query 174 SPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVD 233 SPRAGDGFIR+D +G V +ASPNA SAY RMG TELEG +L D + L+ D FE+ E+ Sbjct 177 SPRAGDGFIRVDQEGRVVFASPNAQSAYRRMGAFTELEGSDLADLSARLVGDRFESEELL 236 Query 234 EHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALIS 293 + L G G R+E+ G TV++R L L GR GAA+L+RDV+E+KRRDRALIS Sbjct 237 AALDGALT-RGDGARVELTTAGVTVVMRVLGLWPGGRPGGAAVLLRDVSELKRRDRALIS 295 Query 294 KDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSV 353 KDATIREIHHRVKNNLQ+V+ALLRLQARRT N E + AL ESVRRV+SIALVH+ LSMSV Sbjct 296 KDATIREIHHRVKNNLQSVSALLRLQARRTRNDEAKRALHESVRRVASIALVHETLSMSV 355 Query 354 DEQVNLDEVIDRILPIMNDVASVD----RPIRINRVGDLGVLDSDRATALIMVITELVQN 409 DEQVN+D+VIDR++PIM DVA + + R GD G LD+DRA L+MV+TEL+QN Sbjct 356 DEQVNIDDVIDRLIPIMVDVAPASGGATAAVTVLRRGDFGYLDADRAMPLVMVVTELIQN 415 Query 410 AIEHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSA 469 AIEH + G+V + A+RS R L V V DDG G+P GF+L +SD LGLQIVRTLV++ Sbjct 416 AIEHGYG-VGETGTVELLADRSTRRLRVTVRDDGAGIPDGFALGESDRLGLQIVRTLVAS 474 Query 470 ELDGSLGMRDARERGTDVVLRVPV 493 EL G + + GTD VL VP+ Sbjct 475 ELGGEITLAARTAGGTDAVLTVPL 498 >gi|258651645|ref|YP_003200801.1| signal transduction histidine kinase [Nakamurella multipartita DSM 44233] gi|258554870|gb|ACV77812.1| signal transduction histidine kinase [Nakamurella multipartita DSM 44233] Length=500 Score = 459 bits (1180), Expect = 7e-127, Method: Compositional matrix adjust. Identities = 258/507 (51%), Positives = 342/507 (68%), Gaps = 18/507 (3%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTL D+LAEH+ + G+AV HL AVV EWQLLADLSF+D L+WV + L+C AQ RP Sbjct 1 MSTLSDVLAEHSSISGAAVAHLQAVVSEWQLLADLSFSDLLLWVPTEPDRLICAAQARPT 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSV--EVSPVRF 118 TG T D V VVA + L+ + E V + + + + PVR Sbjct 61 TGVTAFVDDRVKAVVALSEFTLLRRGWE-----EERVVSDEPPLEAPRSWIRRQAIPVRH 115 Query 119 GDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAG 178 +V+A++ R L R S LETAY A DL +M+ +G+FP G A + PRAG Sbjct 116 LGEVIAIIERDTSSLVGREGS-LLETAYVDAADDLFQMVCDGSFPPPGRPAELHTGPRAG 174 Query 179 DGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQD 238 DG +RLD DG V Y SPNALSAYHR+ E+ G +L TR LI DPF+A E++ + D Sbjct 175 DGLLRLDADGKVVYVSPNALSAYHRLAYNGEMLGQSLAQLTRGLIDDPFDASELETRITD 234 Query 239 LLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATI 298 +AG +RMEV+A ATVL R LPL GR GA +L+RDVTEV+RRDRAL+SKDATI Sbjct 235 AVAGR-PSLRMEVEAKAATVLFRALPLRPHGRASGALVLVRDVTEVRRRDRALLSKDATI 293 Query 299 REIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVN 358 REIHHRVKNNLQTVAALLR+QARR+++ R+AL ESVRRV+SIA+VH+ LS S D++V+ Sbjct 294 REIHHRVKNNLQTVAALLRMQARRSADPSVRQALGESVRRVASIAMVHETLSTSPDDRVD 353 Query 359 LDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPA 418 LD+++DR++P+++DVA+ + R+ RVG G+L ++ AT L+MV+ E+VQNA++HAF+PA Sbjct 354 LDQIVDRLVPMISDVAAAETSARVRRVGSFGILGAELATPLVMVLAEVVQNALQHAFEPA 413 Query 419 A------AEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELD 472 + V I +RSA+ LD+VV D+G+GLP GF++E++ LGLQIVRTLV AEL Sbjct 414 PDAPVGDEQAQVRITVDRSAKQLDIVVSDNGVGLPAGFAVEQASGLGLQIVRTLVEAELL 473 Query 473 GSLGMRD-ARERGTDVVLRVPVGRRGR 498 G++ M D E GT V + VP+ RGR Sbjct 474 GTIEMGDRTPEPGTFVRMSVPL--RGR 498 >gi|343927611|ref|ZP_08767079.1| putative two-component histidine kinase [Gordonia alkanivorans NBRC 16433] gi|343762252|dbj|GAA14005.1| putative two-component histidine kinase [Gordonia alkanivorans NBRC 16433] Length=509 Score = 456 bits (1174), Expect = 4e-126, Method: Compositional matrix adjust. Identities = 269/510 (53%), Positives = 333/510 (66%), Gaps = 28/510 (5%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTL DLLAEHT L +A HL +V EWQLLADLSFAD+L+ VR D+G +V VAQCRPN Sbjct 1 MSTLADLLAEHTTLSDAAAAHLQRLVAEWQLLADLSFADFLLSVRTDEGAVVTVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGV------PGREGAVGQQNSCQHDGHSVEVS 114 T TV TD VG V+ P V F P GA + E Sbjct 61 TASTVFPTDEVGRVIDTAVHPQVLRAFDSDKVLRDEDPTWFGATAMRQ---------EAV 111 Query 115 PVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSS 174 PV F V+ VLTR +L R LE AY+ A DL +M+A+GTFP S+ Sbjct 112 PVGFDGAVIGVLTR-AVDLTHPRLPSPLELAYQDSADDLCQMVADGTFPHEEGNPRGLST 170 Query 175 PRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDE 234 PRAGDGFIRLD G V+Y SPNALSA+HRMG T EL L D + L+++PFEA +V Sbjct 171 PRAGDGFIRLDRTGTVTYTSPNALSAFHRMGWTAELNHTRLSDVVKQLVTEPFEADDV-A 229 Query 235 HVQDLLAGDGK---------GMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVK 285 + D+ AG + GMR+E DA ATVL+R +PL G G+ +LIRDVTEVK Sbjct 230 MMLDIAAGVAEVPTGPYRDIGMRVEADARRATVLIRAVPLRPKGEESGSVVLIRDVTEVK 289 Query 286 RRDRALISKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALV 345 RRDRALISKDATIREIHHRVKNNLQ+V+ALLRLQARRTSN + REAL E+VRRV+SIALV Sbjct 290 RRDRALISKDATIREIHHRVKNNLQSVSALLRLQARRTSNTDAREALNEAVRRVASIALV 349 Query 346 HDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITE 405 H+ LS SVDE+V+LDEV+DR++PI+ DVAS + + + LGVL ++ A L+MV+TE Sbjct 350 HELLSGSVDEEVDLDEVVDRLVPILVDVASNESRVTVRHRDRLGVLPAELAMPLVMVLTE 409 Query 406 LVQNAIEHAFDPAA-AEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVR 464 L+QNAIEH FD + ++ + + AER R L + V D+G GLP+ F L SD LGLQIV+ Sbjct 410 LIQNAIEHGFDGSPRSDAEIAVIAERDVRNLRIAVRDNGSGLPENFDLATSDHLGLQIVK 469 Query 465 TLVSAELDGSLGMRDARE-RGTDVVLRVPV 493 TLVS EL G L +R E GT+V + +P+ Sbjct 470 TLVSIELGGELDVRPNPEGLGTEVGVHIPL 499 >gi|331698905|ref|YP_004335144.1| signal transduction histidine kinase [Pseudonocardia dioxanivorans CB1190] gi|326953594|gb|AEA27291.1| signal transduction histidine kinase [Pseudonocardia dioxanivorans CB1190] Length=499 Score = 450 bits (1158), Expect = 3e-124, Method: Compositional matrix adjust. Identities = 267/507 (53%), Positives = 335/507 (67%), Gaps = 20/507 (3%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDG---------VL 51 MSTL +LLA HT LPG AVDHL VV EWQLLAD+SFAD+L+W+ DG Sbjct 1 MSTLSELLAAHTQLPGEAVDHLQRVVAEWQLLADMSFADFLLWIPLPDGDHALAGGATEF 60 Query 52 VCVAQCRPNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSV 111 +CVAQ RP+T PT D VG V A P + G RE ++ H V Sbjct 61 LCVAQARPDTAPTAHPEDMVGARVTAADNPQLRRAVVEGRICRE-----EDPRWHLEVPV 115 Query 112 --EVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVA 169 E PVR +V+AVL+R LA R LE AY A+DL +M+A+GTFP A VA Sbjct 116 RRETIPVRHNGRVLAVLSRDT-NLAMPRVPSPLEIAYLGSASDLCQMIADGTFPPAASVA 174 Query 170 MSRSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEA 229 + +SPRAGDG IRLD G+V+YASPNALSAYHRMG ++L G+ L DATR L+ DPF+A Sbjct 175 GADTSPRAGDGLIRLDSRGLVAYASPNALSAYHRMGHASDLIGLPLADATRKLVRDPFDA 234 Query 230 HEVDEHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDR 289 EV ++ L+G +R+E+ A GA +L+R LPL G GA +L+RDVT+++RRD Sbjct 235 AEVAARIESALSGRSS-LRLEIRARGAVMLVRALPLRPRGDAAGALVLVRDVTDLRRRDL 293 Query 290 ALISKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDAL 349 AL+SKDATIREIHHRVKNNLQTVAALLRLQARRTS E + AL ESVRRVSSIALVH+AL Sbjct 294 ALLSKDATIREIHHRVKNNLQTVAALLRLQARRTSIPEAKLALAESVRRVSSIALVHEAL 353 Query 350 SMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQN 409 + SV EQV+LD++ID +LP++ D A+ D ++ R G G + AT L++V+TELV N Sbjct 354 AYSVAEQVDLDQLIDTVLPMIGDGATADVRAKVRREGSFGTHPAAMATPLVLVVTELVHN 413 Query 410 AIEHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSA 469 A+ HAF A G V + A RSA L V + DDG GLP GF + ++ LGLQIVRTL+ + Sbjct 414 ALRHAFASDQA-GEVVVSARRSAGRLVVAIADDGRGLPDGFDPDGANGLGLQIVRTLLHS 472 Query 470 ELDGSLGMRDARERGTDVVLRVP-VGR 495 ELD SL +R GT+ V+ +P VGR Sbjct 473 ELDSSLQLRPRAGGGTEAVIELPLVGR 499 >gi|262203400|ref|YP_003274608.1| histidine kinase dimerization/phosphoacceptor [Gordonia bronchialis DSM 43247] gi|262086747|gb|ACY22715.1| histidine kinase dimerization/phosphoacceptor [Gordonia bronchialis DSM 43247] Length=500 Score = 446 bits (1146), Expect = 5e-123, Method: Compositional matrix adjust. Identities = 266/509 (53%), Positives = 329/509 (65%), Gaps = 27/509 (5%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN 60 MSTL DLLAEHT L +A HL +V EWQLLADLSFAD+L+ VR D G + VAQCRPN Sbjct 1 MSTLADLLAEHTTLSDTAAAHLQRLVAEWQLLADLSFADFLLSVRTDSGAAITVAQCRPN 60 Query 61 TGPTVVHTDAVGTVVAANSMPLVAATFSGGV------PGREGAVGQQNSCQHDGHSVEVS 114 T TV +D VG V+ A+ P V F P GA+ + E Sbjct 61 TASTVFPSDEVGRVIDADVNPQVGRAFDEARILRDEDPTWVGAMAIRR---------EAV 111 Query 115 PVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSS 174 PV F V+AVLTR +L R LE AY+ A DL +M+A+GTFP S+ Sbjct 112 PVGFDGAVIAVLTRAT-DLTHPRLPSPLELAYQDSANDLCQMVADGTFPHEEGNPRGLST 170 Query 175 PRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDE 234 PRAGDGFIRLD G+V+Y SPNALSA HRMG T EL L + L++D FEA +V Sbjct 171 PRAGDGFIRLDGHGLVTYTSPNALSAVHRMGWTAELAHTRLSEVITELLTDAFEATDVAS 230 Query 235 HVQDLLAGDGK---------GMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVK 285 + D+ AG GMR+E DA ATVL+R +PL G GA +LIRDVTEVK Sbjct 231 MI-DVAAGAASPPTVPYRDIGMRVEADARRATVLIRAVPLRPRGEVSGAVVLIRDVTEVK 289 Query 286 RRDRALISKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALV 345 RRDRALISKDATIREIHHRVKNNLQ+V+ALLRLQARRT+N + R AL E+VRRV+SIALV Sbjct 290 RRDRALISKDATIREIHHRVKNNLQSVSALLRLQARRTANEDARVALTEAVRRVASIALV 349 Query 346 HDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITE 405 H+ LS SVDE+V+LDE +DR++PI+ DVAS D+ I + LGVL ++ A L+MV+TE Sbjct 350 HELLSGSVDEEVDLDEAVDRLVPILVDVASGDQTIAVRHRDRLGVLAAEFAMPLVMVLTE 409 Query 406 LVQNAIEHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRT 465 L+QNA EH FD + A+ + I A+R R L + V D+G GLP F L S+ LGLQIV+T Sbjct 410 LIQNAFEHGFDGSQADAEIDIVAQRDVRTLRIAVRDNGFGLPDDFDLVTSEHLGLQIVQT 469 Query 466 LVSAELDGSLGM-RDARERGTDVVLRVPV 493 LVS EL G L + + RGT+V + +P+ Sbjct 470 LVSIELGGELVVGPNPAGRGTEVAIVIPL 498 >gi|291302627|ref|YP_003513905.1| signal transduction histidine kinase [Stackebrandtia nassauensis DSM 44728] gi|290571847|gb|ADD44812.1| signal transduction histidine kinase [Stackebrandtia nassauensis DSM 44728] Length=492 Score = 417 bits (1071), Expect = 3e-114, Method: Compositional matrix adjust. Identities = 240/500 (48%), Positives = 315/500 (63%), Gaps = 14/500 (2%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMW--VRRDDGVLVCVAQCR 58 MSTLGDL+A HT L + +HLH + EWQLLADLSFAD L+W VR +G +C+AQ R Sbjct 1 MSTLGDLIAAHTDLSANTSEHLHRLAAEWQLLADLSFADLLLWAPVRDREGCYICLAQVR 60 Query 59 PNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSV--EVSPV 116 P TGPT D VG V++ + +FS G REG + H E PV Sbjct 61 PTTGPTAYDDDQVGRVLSGKDAEHLHTSFSEGRIFREG-----DPVWHGATPARHEAVPV 115 Query 117 RFGD--QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSS 174 R D QVVAV+ R L+ R HLE Y A L+RML +G FP ++ Sbjct 116 RRRDRQQVVAVVARDT-NLSDTRSPSHLELNYLKTADYLIRMLTDGGFPPPLLPGEPTTA 174 Query 175 PRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDE 234 PR GDG +R+ DG+V YASPNALSAY RMG+T L G NL + TR L+ DP +A +V Sbjct 175 PRVGDGLVRIGADGLVRYASPNALSAYRRMGVTGVLSGENLAELTRGLVDDPEKAKDVHR 234 Query 235 HVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISK 294 + L+G+ R E++A GA VL+R LPL G+ GA +L+RDVTEV+R DR L++K Sbjct 235 RINRALSGETP-RRKEIEARGAVVLVRALPLRPDGQGAGALVLVRDVTEVRRLDRELVTK 293 Query 295 DATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVD 354 +ATIREIHHRVKNNLQTVAALLRLQARR + R AL ESVRRV+SIALVH+ LS S D Sbjct 294 EATIREIHHRVKNNLQTVAALLRLQARRVGVPQARAALEESVRRVTSIALVHETLSRSSD 353 Query 355 EQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHA 414 E V+ D ++D++ + +VA+ + +R RVG+ GVL S+ AT L+M++ ELVQNA+EHA Sbjct 354 EAVSFDAIVDKVASMAAEVAAPESQVRPRRVGNFGVLPSEVATPLVMILNELVQNAVEHA 413 Query 415 FDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGS 474 + P G V + +R L V V+D G GLP+GF ++ + LGLQIV TL + EL G+ Sbjct 414 YPPGQG-GEVVVDVQREGDRLQVTVYDHGRGLPEGFRIDATHRLGLQIVHTLATGELRGT 472 Query 475 LGMRDARERGTDVVLRVPVG 494 + + + + G + VL +G Sbjct 473 IKLGNREDGGAEAVLDFTIG 492 >gi|324998110|ref|ZP_08119222.1| signal transduction histidine kinase [Pseudonocardia sp. P1] Length=511 Score = 414 bits (1065), Expect = 2e-113, Method: Compositional matrix adjust. Identities = 250/518 (49%), Positives = 320/518 (62%), Gaps = 38/518 (7%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDD------------ 48 ++TL +LLAEHT + G DHL VVGEWQLLAD+SFAD+L+WV DD Sbjct 6 VTTLSELLAEHTTMGGETADHLQRVVGEWQLLADMSFADFLLWVPLDDLNAVAEDGTTSR 65 Query 49 ---GVLVCVAQCRPNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQ 105 +CVAQ RP T PT D VG AAT G R AV + C+ Sbjct 66 ASTAQFLCVAQARPTTAPTAHPDDVVGRR---------AATVEVGQLRR--AVLEGRICR 114 Query 106 HDGHSV--------EVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRML 157 D E PVR + VAVL+R LA R LE AY A+DL +M+ Sbjct 115 DDDPRWHLEVPVRRETIPVRHHGRTVAVLSRDT-NLATPRVPSPLEIAYLGSASDLCQMI 173 Query 158 AEGTFP-DAGDVAMSRSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLI 216 +GTFP +G + SPRAGDG +RLDV G V+YASPNALSAYHRMG +++ G +L Sbjct 174 VDGTFPPQSGPPGSAEGSPRAGDGLVRLDVHGNVAYASPNALSAYHRMGHASDVAGADLA 233 Query 217 DATRPLISDPFEAHEVDEHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAI 276 T+ L+ DPF+A +V + D LAG RMEV AT+L+R LPL G GA + Sbjct 234 AVTKALVLDPFDAKDVAGRISDALAGT-PSSRMEVKGRRATMLVRALPLRPRGDAAGALV 292 Query 277 LIRDVTEVKRRDRALISKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESV 336 L+RDVT+++RRD AL+SKDATIREIHHRVKNNLQTVAALLRLQ RR+ E AL E+V Sbjct 293 LVRDVTDLRRRDAALMSKDATIREIHHRVKNNLQTVAALLRLQGRRSEYPEAGRALEEAV 352 Query 337 RRVSSIALVHDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRA 396 RRV+SIALVH+AL+ SV E V LDE++ ++LP + D A+ + R+ G L + +A Sbjct 353 RRVTSIALVHEALAYSVAETVELDELLPKVLPAIRDGATTESRARVRVDAGFGALPAAKA 412 Query 397 TALIMVITELVQNAIEHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSD 456 T L++V+ ELV NA+ HA+DP A G V + +RSA L+V V DDG G+P F EKS Sbjct 413 TPLVLVLAELVHNALAHAYDPGIA-GEVVVSPQRSAGRLEVSVADDGHGMPPEFDFEKSK 471 Query 457 SLGLQIVRTLVSAELDGSLGMRDARERGTDVVLRVPVG 494 LGLQIVRTL+S+EL+ ++ + D GT ++RVP+G Sbjct 472 GLGLQIVRTLLSSELEATITVSDRDGGGTVALIRVPLG 509 >gi|326383292|ref|ZP_08204980.1| histidine kinase dimerization/phosphoacceptor [Gordonia neofelifaecis NRRL B-59395] gi|326198042|gb|EGD55228.1| histidine kinase dimerization/phosphoacceptor [Gordonia neofelifaecis NRRL B-59395] Length=513 Score = 412 bits (1059), Expect = 7e-113, Method: Compositional matrix adjust. Identities = 259/516 (51%), Positives = 322/516 (63%), Gaps = 27/516 (5%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLM-------WVRRDDGVLVC 53 M+TL DLLAEHT L +A +HL +V EWQLLADLSFADYL+ LV Sbjct 1 MATLTDLLAEHTTLSAAAAEHLQRLVAEWQLLADLSFADYLLAVPGEGGVGGPGTSGLVY 60 Query 54 VAQCRPNTGPTVVHTDAVGTVV-----AANSMPLVAATFSGGVPGREGAVGQQNSCQHDG 108 VAQ RPNT TV D VG V A + PL+AA GV REG + + + Sbjct 61 VAQVRPNTASTVFPRDEVGHRVDLPASAQGANPLMAAALHSGVIEREGIATRFGNVLIER 120 Query 109 HSVEVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDV 168 ++ PV FG QV+AVL R + + R LE+AYR A L RM+ EGTFP Sbjct 121 TAI---PVGFGGQVIAVLGRAG-DASDPRPPSPLESAYRDAAEALCRMVVEGTFPLDEAN 176 Query 169 AMSRSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFE 228 + S+PRAGDGFIR++ G V+YASPNALSA HRMG TT+L G + D L++DPFE Sbjct 177 TLGLSTPRAGDGFIRIEAGGTVTYASPNALSAVHRMGWTTDLGGSRVADVLAALLTDPFE 236 Query 229 AHEVDEHVQDL--------LAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRD 280 + + + L +RME+DA ATVLLR +PL G++ GA +LIRD Sbjct 237 SADAAAMIAAASGTVDAARLPSPDMALRMELDARRATVLLRAVPLRSQGQSRGAVLLIRD 296 Query 281 VTEVKRRDRALISKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVS 340 VTEV+RRD ALISKDATIREIHHRVKNNLQ+V+ALLRLQARR+ N E AL E+VRRVS Sbjct 297 VTEVRRRDLALISKDATIREIHHRVKNNLQSVSALLRLQARRSGNPETTAALGEAVRRVS 356 Query 341 SIALVHDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIR--INRVGDLGVLDSDRATA 398 SIALVH+ LS SVDE+V+LD V+DR+ + DV D R + R LGVL +D A Sbjct 357 SIALVHEMLSGSVDEEVDLDTVVDRLGSSLVDVWLPDGGTRVAVRRENRLGVLPADLAMP 416 Query 399 LIMVITELVQNAIEHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSL 458 L+MV+TE++QN+IEH F + + A R R L V V D+G GLP+GF L SD L Sbjct 417 LVMVLTEVIQNSIEHGFTAGQEGAEIVVGAVRDVRGLRVTVTDNGCGLPEGFDLAASDRL 476 Query 459 GLQIVRTLVSAELDGSLGMRDARER-GTDVVLRVPV 493 GLQIVRTLVS +L G + + R+R GT V L +P+ Sbjct 477 GLQIVRTLVSNDLGGQIEIAPMRDRAGTRVRLDIPL 512 >gi|330469940|ref|YP_004407683.1| histidine kinase dimerization/phosphoacceptor [Verrucosispora maris AB-18-032] gi|328812911|gb|AEB47083.1| histidine kinase dimerization/phosphoacceptor [Verrucosispora maris AB-18-032] Length=512 Score = 411 bits (1057), Expect = 1e-112, Method: Compositional matrix adjust. Identities = 246/516 (48%), Positives = 309/516 (60%), Gaps = 28/516 (5%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRD-DGVLVCVAQCRP 59 MSTL DL EHT L + +DHLH + G+WQLL+DLSFAD L+WV D +G +CVAQ RP Sbjct 1 MSTLRDLAEEHTRLRPADIDHLHRIAGDWQLLSDLSFADLLLWVPVDGEGTFLCVAQVRP 60 Query 60 NTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQN--SCQHDGHSVEVSPVR 117 T PT D VG +V + + + G REG +H E PVR Sbjct 61 TTAPTAYQDDQVGRIVGGPEVAHLEVAYGQGRIWREGDPVWYGDVPARH-----EAIPVR 115 Query 118 F------GDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMS 171 +V+AV+ R L+ R LE Y A DL +M+A+GTFP + Sbjct 116 LRAADGESGEVIAVVGRDT-NLSTARTPSQLELNYLTTADDLAQMIADGTFPPPRHPGET 174 Query 172 RSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHE 231 S+PR GDG +RLD G V+YASPNA SAY R+G + L G +L R L SDP E E Sbjct 175 TSAPRVGDGLVRLDAGGKVTYASPNAQSAYRRLGYASHLVGEDLAALNRRLASDPLEGTE 234 Query 232 VDEHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRAL 291 + L G+ R E+DA GAT+L R LPL+ AG +GA +L+RD+TEV+RRDRAL Sbjct 235 AANGILAALRGEAP-PRREIDARGATMLTRALPLMPAGVPIGALVLVRDITEVRRRDRAL 293 Query 292 ISKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSM 351 I+KDATIREIHHRVKNNLQTVAALLRLQARR E R AL ESVRRV+SIALVH+ LSM Sbjct 294 ITKDATIREIHHRVKNNLQTVAALLRLQARRVGMPEARVALEESVRRVASIALVHETLSM 353 Query 352 SVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAI 411 S DE V D ++DR+ +VA+ + + + R G GVL ++ AT+L+MV+ EL+ NA+ Sbjct 354 SSDEAVEFDGIVDRVASAATEVAATEVSVGMRREGSFGVLPAEIATSLVMVLNELLLNAV 413 Query 412 EHAFDPAAAEG------------SVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLG 459 EH F PA G V + A R + L V V D+G GLP GF E LG Sbjct 414 EHGFPPADEGGPEPVPQEPLAPPQVVVTAHRLRKTLHVTVADNGRGLPAGFDSEGGAKLG 473 Query 460 LQIVRTLVSAELDGSLGMRDARERGTDVVLRVPVGR 495 LQIVR LV+ EL GS+ +R E GT+ VL VP+ R Sbjct 474 LQIVRALVTGELRGSIELRPGAEGGTEAVLTVPLAR 509 >gi|302869691|ref|YP_003838328.1| histidine kinase dimerization/phosphoacceptor [Micromonospora aurantiaca ATCC 27029] gi|302572550|gb|ADL48752.1| histidine kinase dimerization/phosphoacceptor [Micromonospora aurantiaca ATCC 27029] Length=530 Score = 405 bits (1042), Expect = 7e-111, Method: Compositional matrix adjust. Identities = 240/520 (47%), Positives = 314/520 (61%), Gaps = 28/520 (5%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRD-DGVLVCVAQCRP 59 MSTL DL EHT L + +DHLH + G+WQLL+DLSFAD L+WV D DG +CVAQ RP Sbjct 1 MSTLRDLAEEHTALRPADIDHLHRIAGDWQLLSDLSFADLLLWVPVDGDGTFLCVAQVRP 60 Query 60 NTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFG 119 T PT D VG +V + + G REG ++ V +R G Sbjct 61 TTAPTAYLDDQVGRIVGGAEVAHLEVAHRQGRIWREGDPVWYGDVPARHEAIPVR-LRTG 119 Query 120 D----QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSP 175 D +V+AV+ R L+ R LE Y A DL +M+A+GTFP + S+P Sbjct 120 DGEAGEVIAVVGRDT-NLSTARTPSQLELNYLTTADDLAQMIADGTFPPPRHPGETTSAP 178 Query 176 RAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEH 235 R GDG +RLD +G V+YASPNA SAY R+G + L G +L R L DP E + Sbjct 179 RVGDGLVRLDANGKVTYASPNAQSAYRRLGYASHLVGEDLAKLHRRLAGDPLEGTDAGNA 238 Query 236 VQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKD 295 V L G+ R E+DA GAT+L R LPL+ AG +GA +L+RD+TEV+RRDRALI+KD Sbjct 239 VLAALRGEAP-PRREIDARGATMLTRALPLMPAGVPIGALVLVRDITEVRRRDRALITKD 297 Query 296 ATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDE 355 ATIREIHHRVKNNLQTVAALLRLQARR + E R AL ESVRRV+SIALVH+ LSMS DE Sbjct 298 ATIREIHHRVKNNLQTVAALLRLQARRVAMPEARVALEESVRRVASIALVHETLSMSSDE 357 Query 356 QVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAF 415 V D ++DR+ +VA+ + + + R G GVL ++ AT+L+MV+ EL+ NA+EH F Sbjct 358 AVEFDGIVDRVASAATEVAATEVSVGMRRRGTFGVLPAEIATSLVMVLNELLLNAVEHGF 417 Query 416 DPAAAEGS--------------------VTIRAERSARWLDVVVHDDGLGLPQGFSLEKS 455 PA E + V + A R+ + L V V D+G GLP+ F E+ Sbjct 418 PPADEEAAAPSPGDAARPEAVVSAPRPEVVVSAHRARKQLHVTVTDNGRGLPEQFDAERG 477 Query 456 DSLGLQIVRTLVSAELDGSLGMRDARERGTDVVLRVPVGR 495 +LGLQIVR LV+ EL G++ +R+ + GT+ + VP+ R Sbjct 478 GNLGLQIVRALVTGELRGTIDLRNGADGGTEAAIVVPLAR 517 >gi|315503827|ref|YP_004082714.1| signal transduction histidine kinase [Micromonospora sp. L5] gi|315410446|gb|ADU08563.1| signal transduction histidine kinase [Micromonospora sp. L5] Length=534 Score = 404 bits (1038), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 240/524 (46%), Positives = 313/524 (60%), Gaps = 32/524 (6%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRD-DGVLVCVAQCRP 59 MSTL DL EHT L + +DHLH + G+WQLL+DLSFAD L+WV D DG +CVAQ RP Sbjct 1 MSTLRDLAEEHTALRPADIDHLHRIAGDWQLLSDLSFADLLLWVPVDGDGTFLCVAQVRP 60 Query 60 NTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFG 119 T PT D VG +V + + G REG ++ V +R G Sbjct 61 TTAPTAYLDDQVGRIVGGAEVAHLEVAHRQGRIWREGDPVWYGDVPARHEAIPVR-LRTG 119 Query 120 D----QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSP 175 D +V+AV+ R L+ R LE Y A DL +M+A+GTFP + S+P Sbjct 120 DGEAGEVIAVVGRDT-NLSTARTPSQLELNYLTTADDLAQMIADGTFPPPRHPGETTSAP 178 Query 176 RAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEH 235 R GDG +RLD +G V+YASPNA SAY R+G + L G +L R L DP E + Sbjct 179 RVGDGLVRLDANGKVTYASPNAQSAYRRLGYASHLVGEDLAKLHRRLAGDPLEGTDAGNA 238 Query 236 VQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKD 295 V L G+ R E+DA GAT+L R LPL+ AG +GA +L+RD+TEV+RRDRALI+KD Sbjct 239 VLAALRGEAP-PRREIDARGATMLTRALPLMPAGVPIGALVLVRDITEVRRRDRALITKD 297 Query 296 ATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDE 355 ATIREIHHRVKNNLQTVAALLRLQARR + E R AL ESVRRV+SIALVH+ LSMS DE Sbjct 298 ATIREIHHRVKNNLQTVAALLRLQARRVAMPEARVALEESVRRVASIALVHETLSMSSDE 357 Query 356 QVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAF 415 V D ++DR+ +VA+ + + + R G GVL ++ AT+L+MV+ EL+ NA+EH F Sbjct 358 AVEFDGIVDRVASAATEVAATEVSVGMRRRGTFGVLPAEIATSLVMVLNELLLNAVEHGF 417 Query 416 DPAAAEG------------------------SVTIRAERSARWLDVVVHDDGLGLPQGFS 451 PA E V + A R+ + L V V D+G GLP+ F Sbjct 418 PPADEEAGAPSPSPSPADAARPEAVVSAPRPEVVVSAHRARKQLHVTVTDNGRGLPEQFD 477 Query 452 LEKSDSLGLQIVRTLVSAELDGSLGMRDARERGTDVVLRVPVGR 495 E+ +LGLQIVR LV+ EL G++ +R+ + GT+ + VP+ R Sbjct 478 AERGGNLGLQIVRALVTGELRGTIDLRNGADGGTEAAIVVPLAR 521 >gi|317508056|ref|ZP_07965742.1| histidine kinase [Segniliparus rugosus ATCC BAA-974] gi|316253652|gb|EFV13036.1| histidine kinase [Segniliparus rugosus ATCC BAA-974] Length=513 Score = 403 bits (1035), Expect = 4e-110, Method: Compositional matrix adjust. Identities = 231/509 (46%), Positives = 311/509 (62%), Gaps = 27/509 (5%) Query 4 LGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGV------------- 50 + +LLAE T L G V+HL +V EWQL+ADL+FAD+LMWVR+D Sbjct 1 MSELLAERTTLTGDQVEHLKRLVAEWQLIADLAFADFLMWVRQDSPTACEGEDPARRESL 60 Query 51 ------LVCVAQCRPNTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSC 104 +VCVAQCRP T T++ D VGT V PLV+ G V GR Sbjct 61 GDPSERVVCVAQCRPTTAATLLPGDMVGTEVGE---PLVSQLRRGLVEGRIVEPEDPMWL 117 Query 105 QHDGHSVEVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPD 164 ++ EV PVR +V+AV++R+ L R SG+LETAY A L +M+ +G FPD Sbjct 118 EYVPTRREVIPVRKDGEVIAVISRYV-NLLQNRSSGNLETAYTSAADALCQMVCDGAFPD 176 Query 165 AGDVAMSRSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLIS 224 D PRAGDGF+RL G ++Y+SPNA SA R+G G +L++ R + Sbjct 177 PLDKG---PGPRAGDGFLRLAETGAITYSSPNASSALRRLGWEGTFMGSDLVEIVRAAVP 233 Query 225 DPFEAHEVDEHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEV 284 D + + L G+ R+EV+A GA L R + L +G GA +L+RDVTE+ Sbjct 234 DSLTVEDTLTALVAALQGEIADARVEVEANGAVTLWRMVGLRQSGEMAGAVVLLRDVTEL 293 Query 285 KRRDRALISKDATIREIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIAL 344 + RDRALISKDATIREIHHRVKNNLQ+V+ALLR+QARRT NAE R+AL +SVRR+ SIAL Sbjct 294 RHRDRALISKDATIREIHHRVKNNLQSVSALLRMQARRTENAEARQALEDSVRRIGSIAL 353 Query 345 VHDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVIT 404 VHDALS+S DE V++DE++D+++ ++ D+ + + I R G G L+++RA +L ++T Sbjct 354 VHDALSISSDEHVSVDEIVDKLMLLLADLGAPGTSVSIRREGRFGSLEAERAMSLTTILT 413 Query 405 ELVQNAIEHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVR 464 EL QNA+EHAF P +G V IRAER +WL V V D G+G P+GF + + LGL+I Sbjct 414 ELAQNALEHAFQP-GDKGEVVIRAERKGKWLSVEVADTGVGFPEGFDPKATKRLGLRIAA 472 Query 465 TLVSAELDGSLGMRDARERGTDVVLRVPV 493 TL +EL SL + + G+ L VPV Sbjct 473 TLAESELQASLELGSSELGGSSARLDVPV 501 >gi|284033089|ref|YP_003383020.1| signal transduction histidine kinase [Kribbella flavida DSM 17836] gi|283812382|gb|ADB34221.1| signal transduction histidine kinase [Kribbella flavida DSM 17836] Length=491 Score = 402 bits (1033), Expect = 7e-110, Method: Compositional matrix adjust. Identities = 238/498 (48%), Positives = 320/498 (65%), Gaps = 14/498 (2%) Query 1 MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGV-LVCVAQCRP 59 M +L D++ HT L + +D L +V +WQ+LADLSFAD ++W+ +G+ AQ RP Sbjct 1 MPSLSDVVRNHTTLDQADLDRLQLLVSDWQMLADLSFADLVLWLPDTEGLGFWAGAQMRP 60 Query 60 NTGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQQNSCQHDGHSVEVSPVRFG 119 TGPT D VG+ + + PL+ + GG REG ++ VE PVR G Sbjct 61 TTGPTAYLDDIVGSFIPRDRRPLLDQAYDGGRICREGDPEWRDDVPV---RVETIPVRRG 117 Query 120 DQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGD 179 +V+AV+ R+ L R S LE AY ATDL RM+ +G FP G+ +S ++PR GD Sbjct 118 SRVIAVIARNTNLLGVRTPS-RLEIAYLQSATDLARMITDGIFPYGGERLLS-TTPRVGD 175 Query 180 GFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDL 239 G IR+D G+V++ASPNALSAY RMGL T+L G L D + L+ H+VD+ + + Sbjct 176 GCIRVDRHGMVTFASPNALSAYRRMGLVTDLVGSRLKDVSGELL---HSGHKVDDVLASV 232 Query 240 LAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIR 299 L G +E++ AT+ LR +PL G +VGA IL+RDVTE++ R+R L++K+ATIR Sbjct 233 LTGRA-AKELEIENPEATLFLRAIPLRADGEHVGALILLRDVTELRSRERELVTKEATIR 291 Query 300 EIHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNL 359 EIHHRVKNNLQTVAALLR+QARR + EG+ AL E+VRRV SIA+VH+ LS S DE V+ Sbjct 292 EIHHRVKNNLQTVAALLRMQARRITVPEGQAALAEAVRRVGSIAIVHETLSESFDEHVDF 351 Query 360 DEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAA 419 D+V DR+ ++ DV++V I R G GVLDS+ AT L MV+TEL+QN++EHAF Sbjct 352 DDVADRVAAMVADVSTVATQIATRRTGSFGVLDSEVATPLAMVLTELMQNSVEHAFGART 411 Query 420 AE---GSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLG 476 E G++T+ A+RS L VV+ DDG GLP+GF E S +LGL IVRTLV ELDG L Sbjct 412 GEDATGTITLEAQRSVGRLRVVIADDGRGLPEGFDSETSGNLGLSIVRTLVLGELDGVLD 471 Query 477 MRDARE-RGTDVVLRVPV 493 + + GT VVL +PV Sbjct 472 FQPRTDGPGTTVVLDIPV 489 Lambda K H 0.320 0.135 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1080570311772 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40