BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3222c

Length=183
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610358|ref|NP_217738.1|  hypothetical protein Rv3222c [Mycob...   355    1e-96
gi|289763409|ref|ZP_06522787.1|  conserved hypothetical protein [...   353    6e-96
gi|294993840|ref|ZP_06799531.1|  hypothetical protein Mtub2_04816...   344    4e-93
gi|323718090|gb|EGB27272.1|  hypothetical protein TMMG_02369 [Myc...   337    5e-91
gi|339296052|gb|AEJ48163.1|  hypothetical protein CCDC5079_2973 [...   260    6e-68
gi|289751913|ref|ZP_06511291.1|  conserved hypothetical protein [...   202    1e-50
gi|340628201|ref|YP_004746653.1|  hypothetical protein MCAN_32401...   136    1e-30
gi|340628576|ref|YP_004747028.1|  hypothetical protein MCAN_36231...   136    2e-30
gi|340626926|ref|YP_004745378.1|  hypothetical protein MCAN_19331...   135    2e-30
gi|289570116|ref|ZP_06450343.1|  predicted protein [Mycobacterium...  96.3    2e-18
gi|296169593|ref|ZP_06851213.1|  conserved hypothetical protein [...  45.8    0.003
gi|169851680|ref|XP_001832529.1|  hypothetical protein CC1G_03543...  34.3    7.6  


>gi|15610358|ref|NP_217738.1| hypothetical protein Rv3222c [Mycobacterium tuberculosis H37Rv]
 gi|15842810|ref|NP_337847.1| hypothetical protein MT3319 [Mycobacterium tuberculosis CDC1551]
 gi|31794401|ref|NP_856894.1| hypothetical protein Mb3249c [Mycobacterium bovis AF2122/97]
 62 more sequence titles
 
gi|121639110|ref|YP_979334.1| hypothetical protein BCG_3250c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|121639202|ref|YP_979426.1| hypothetical protein BCG_3343c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|148663084|ref|YP_001284607.1| hypothetical protein MRA_3262 [Mycobacterium tuberculosis H37Ra]
 gi|148824422|ref|YP_001289176.1| hypothetical protein TBFG_13249 [Mycobacterium tuberculosis F11]
 gi|167966910|ref|ZP_02549187.1| hypothetical protein MtubH3_02155 [Mycobacterium tuberculosis 
H37Ra]
 gi|224991602|ref|YP_002646291.1| hypothetical protein JTY_3245 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253800262|ref|YP_003033263.1| hypothetical protein TBMG_03268 [Mycobacterium tuberculosis KZN 
1435]
 gi|254233835|ref|ZP_04927160.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254365849|ref|ZP_04981894.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254552324|ref|ZP_05142771.1| hypothetical protein Mtube_18038 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289444797|ref|ZP_06434541.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289448909|ref|ZP_06438653.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289555499|ref|ZP_06444709.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289571446|ref|ZP_06451673.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575941|ref|ZP_06456168.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289747039|ref|ZP_06506417.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289755343|ref|ZP_06514721.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289759359|ref|ZP_06518737.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|297635873|ref|ZP_06953653.1| hypothetical protein MtubK4_17197 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297732870|ref|ZP_06961988.1| hypothetical protein MtubKR_17352 [Mycobacterium tuberculosis 
KZN R506]
 gi|298526700|ref|ZP_07014109.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306786093|ref|ZP_07424415.1| hypothetical protein TMCG_01644 [Mycobacterium tuberculosis SUMu003]
 gi|306790460|ref|ZP_07428782.1| hypothetical protein TMDG_02058 [Mycobacterium tuberculosis SUMu004]
 gi|306794981|ref|ZP_07433283.1| hypothetical protein TMEG_03619 [Mycobacterium tuberculosis SUMu005]
 gi|306799180|ref|ZP_07437482.1| hypothetical protein TMFG_00431 [Mycobacterium tuberculosis SUMu006]
 gi|306973668|ref|ZP_07486329.1| hypothetical protein TMJG_03405 [Mycobacterium tuberculosis SUMu010]
 gi|307081377|ref|ZP_07490547.1| hypothetical protein TMKG_02480 [Mycobacterium tuberculosis SUMu011]
 gi|307085981|ref|ZP_07495094.1| hypothetical protein TMLG_01993 [Mycobacterium tuberculosis SUMu012]
 gi|313660202|ref|ZP_07817082.1| hypothetical protein MtubKV_17352 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339633231|ref|YP_004724873.1| hypothetical protein MAF_32320 [Mycobacterium africanum GM041182]
 gi|2072663|emb|CAB08315.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13883137|gb|AAK47661.1| hypothetical protein MT3319 [Mycobacterium tuberculosis CDC1551]
 gi|31619997|emb|CAD95341.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494758|emb|CAL73239.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|121494850|emb|CAL73332.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|124599364|gb|EAY58468.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134151362|gb|EBA43407.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148507236|gb|ABQ75045.1| hypothetical protein MRA_3262 [Mycobacterium tuberculosis H37Ra]
 gi|148722949|gb|ABR07574.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224774717|dbj|BAH27523.1| hypothetical protein JTY_3245 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253321765|gb|ACT26368.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289417716|gb|EFD14956.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289421867|gb|EFD19068.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289440131|gb|EFD22624.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289540372|gb|EFD44950.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289545200|gb|EFD48848.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289687567|gb|EFD55055.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289695930|gb|EFD63359.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289714923|gb|EFD78935.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496494|gb|EFI31788.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308329245|gb|EFP18096.1| hypothetical protein TMCG_01644 [Mycobacterium tuberculosis SUMu003]
 gi|308333077|gb|EFP21928.1| hypothetical protein TMDG_02058 [Mycobacterium tuberculosis SUMu004]
 gi|308336764|gb|EFP25615.1| hypothetical protein TMEG_03619 [Mycobacterium tuberculosis SUMu005]
 gi|308340599|gb|EFP29450.1| hypothetical protein TMFG_00431 [Mycobacterium tuberculosis SUMu006]
 gi|308356910|gb|EFP45761.1| hypothetical protein TMJG_03405 [Mycobacterium tuberculosis SUMu010]
 gi|308360911|gb|EFP49762.1| hypothetical protein TMKG_02480 [Mycobacterium tuberculosis SUMu011]
 gi|308364553|gb|EFP53404.1| hypothetical protein TMLG_01993 [Mycobacterium tuberculosis SUMu012]
 gi|326902548|gb|EGE49481.1| hypothetical protein TBPG_00396 [Mycobacterium tuberculosis W-148]
 gi|328459997|gb|AEB05420.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339332587|emb|CCC28302.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341603149|emb|CCC65827.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344221056|gb|AEN01687.1| hypothetical protein MTCTRI2_3287 [Mycobacterium tuberculosis 
CTRI-2]
Length=183

 Score =  355 bits (911),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 183/183 (100%), Positives = 183/183 (100%), Gaps = 0/183 (0%)

Query  1    MSSPVSSRRLANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGA  60
            MSSPVSSRRLANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGA
Sbjct  1    MSSPVSSRRLANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGA  60

Query  61   VVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVG  120
            VVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVG
Sbjct  61   VVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVG  120

Query  121  VRGESFGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRM  180
            VRGESFGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRM
Sbjct  121  VRGESFGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRM  180

Query  181  VHQ  183
            VHQ
Sbjct  181  VHQ  183


>gi|289763409|ref|ZP_06522787.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289710915|gb|EFD74931.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=183

 Score =  353 bits (906),  Expect = 6e-96, Method: Compositional matrix adjust.
 Identities = 182/183 (99%), Positives = 182/183 (99%), Gaps = 0/183 (0%)

Query  1    MSSPVSSRRLANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGA  60
            MSSPVSSRRLANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGA
Sbjct  1    MSSPVSSRRLANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGA  60

Query  61   VVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVG  120
            VVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVG
Sbjct  61   VVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVG  120

Query  121  VRGESFGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRM  180
            VRGESFGA RRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRM
Sbjct  121  VRGESFGAHRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRM  180

Query  181  VHQ  183
            VHQ
Sbjct  181  VHQ  183


>gi|294993840|ref|ZP_06799531.1| hypothetical protein Mtub2_04816 [Mycobacterium tuberculosis 
210]
Length=217

 Score =  344 bits (882),  Expect = 4e-93, Method: Compositional matrix adjust.
 Identities = 179/179 (100%), Positives = 179/179 (100%), Gaps = 0/179 (0%)

Query  1    MSSPVSSRRLANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGA  60
            MSSPVSSRRLANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGA
Sbjct  1    MSSPVSSRRLANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGA  60

Query  61   VVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVG  120
            VVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVG
Sbjct  61   VVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVG  120

Query  121  VRGESFGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTR  179
            VRGESFGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTR
Sbjct  121  VRGESFGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTR  179


>gi|323718090|gb|EGB27272.1| hypothetical protein TMMG_02369 [Mycobacterium tuberculosis CDC1551A]
Length=174

 Score =  337 bits (863),  Expect = 5e-91, Method: Compositional matrix adjust.
 Identities = 173/174 (99%), Positives = 174/174 (100%), Gaps = 0/174 (0%)

Query  10   LANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGAVVQVGGLEV  69
            +ANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGAVVQVGGLEV
Sbjct  1    MANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGAVVQVGGLEV  60

Query  70   GSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVGVRGESFGAR  129
            GSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVGVRGESFGAR
Sbjct  61   GSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVGVRGESFGAR  120

Query  130  RRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRMVHQ  183
            RRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRMVHQ
Sbjct  121  RRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRMVHQ  174


>gi|339296052|gb|AEJ48163.1| hypothetical protein CCDC5079_2973 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299662|gb|AEJ51772.1| hypothetical protein CCDC5180_2935 [Mycobacterium tuberculosis 
CCDC5180]
Length=134

 Score =  260 bits (665),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 133/134 (99%), Positives = 134/134 (100%), Gaps = 0/134 (0%)

Query  50   VPVVVAAGSGAVVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAG  109
            +PVVVAAGSGAVVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAG
Sbjct  1    MPVVVAAGSGAVVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAG  60

Query  110  QAGQQFGLGVGVRGESFGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYI  169
            QAGQQFGLGVGVRGESFGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYI
Sbjct  61   QAGQQFGLGVGVRGESFGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYI  120

Query  170  GNPSEITDTRMVHQ  183
            GNPSEITDTRMVHQ
Sbjct  121  GNPSEITDTRMVHQ  134


>gi|289751913|ref|ZP_06511291.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289692500|gb|EFD59929.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=115

 Score =  202 bits (515),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 99/102 (98%), Positives = 100/102 (99%), Gaps = 0/102 (0%)

Query  82   VAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVGVRGESFGARRRLALSTVGASG  141
            +  LFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVGVRGESFGARRRLALSTVGASG
Sbjct  14   LRRLFVCRPTEPDVGDFVGLAGGAGDAGQAGQQFGLGVGVRGESFGARRRLALSTVGASG  73

Query  142  ATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRMVHQ  183
            ATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRMVHQ
Sbjct  74   ATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRMVHQ  115


>gi|340628201|ref|YP_004746653.1| hypothetical protein MCAN_32401 [Mycobacterium canettii CIPT 
140010059]
 gi|340006391|emb|CCC45571.1| putative uncharacterized protein [Mycobacterium canettii CIPT 
140010059]
Length=593

 Score =  136 bits (343),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 85/95 (90%), Positives = 87/95 (92%), Gaps = 0/95 (0%)

Query  1   MSSPVSSRRLANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGA  60
           MSSPVSSRRLANLV ESLQGSVLGG+VSDAVLPAV DDVKPGAGEDAY V VVVAAGSGA
Sbjct  1   MSSPVSSRRLANLVTESLQGSVLGGIVSDAVLPAVPDDVKPGAGEDAYGVRVVVAAGSGA  60

Query  61  VVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDV  95
           VV+VGG  VGSAAVAGEVAD VAELFVC PTEPDV
Sbjct  61  VVKVGGPGVGSAAVAGEVADGVAELFVCGPTEPDV  95


 Score =  122 bits (306),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)

Query  126  FGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRMVHQ  183
            FGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRMVHQ
Sbjct  536  FGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYIGNPSEITDTRMVHQ  593


 Score = 75.9 bits (185),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 37/42 (89%), Positives = 38/42 (91%), Gaps = 0/42 (0%)

Query  126  FGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRL  167
            FGARRR  LSTVGASGATAGLRKTHDGHHGCQA  A+TQRRL
Sbjct  451  FGARRRSVLSTVGASGATAGLRKTHDGHHGCQASRAITQRRL  492


>gi|340628576|ref|YP_004747028.1| hypothetical protein MCAN_36231 [Mycobacterium canettii CIPT 
140010059]
 gi|340006766|emb|CCC45954.1| putative uncharacterized protein mb3249c [Mycobacterium canettii 
CIPT 140010059]
Length=641

 Score =  136 bits (342),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 85/95 (90%), Positives = 87/95 (92%), Gaps = 0/95 (0%)

Query  1   MSSPVSSRRLANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGA  60
           MSSPVSSRRLANLV ESLQGSVLGG+VSDAVLPAV DDVKPGAGEDAY V VVVAAGSGA
Sbjct  1   MSSPVSSRRLANLVTESLQGSVLGGIVSDAVLPAVPDDVKPGAGEDAYGVRVVVAAGSGA  60

Query  61  VVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDV  95
           VV+VGG  VGSAAVAGEVAD VAELFVC PTEPDV
Sbjct  61  VVKVGGPGVGSAAVAGEVADGVAELFVCGPTEPDV  95


 Score = 76.3 bits (186),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 37/42 (89%), Positives = 38/42 (91%), Gaps = 0/42 (0%)

Query  126  FGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRL  167
            FGARRR  LSTVGASGATAGLRKTHDGHHGCQA  A+TQRRL
Sbjct  451  FGARRRSVLSTVGASGATAGLRKTHDGHHGCQASRAITQRRL  492


>gi|340626926|ref|YP_004745378.1| hypothetical protein MCAN_19331 [Mycobacterium canettii CIPT 
140010059]
 gi|340005116|emb|CCC44265.1| putative uncharacterised protein [Mycobacterium canettii CIPT 
140010059]
Length=883

 Score =  135 bits (341),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 85/95 (90%), Positives = 87/95 (92%), Gaps = 0/95 (0%)

Query  1    MSSPVSSRRLANLVKESLQGSVLGGVVSDAVLPAVSDDVKPGAGEDAYRVPVVVAAGSGA  60
            MSSPVSSRRLANLV ESLQGSVLGG+VSDAVLPAV DDVKPGAGEDAY V VVVAAGSGA
Sbjct  240  MSSPVSSRRLANLVTESLQGSVLGGIVSDAVLPAVPDDVKPGAGEDAYGVRVVVAAGSGA  299

Query  61   VVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDV  95
            VV+VGG  VGSAAVAGEVAD VAELFVC PTEPDV
Sbjct  300  VVKVGGPGVGSAAVAGEVADGVAELFVCGPTEPDV  334


 Score = 76.3 bits (186),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 37/42 (89%), Positives = 38/42 (91%), Gaps = 0/42 (0%)

Query  126  FGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRL  167
            FGARRR  LSTVGASGATAGLRKTHDGHHGCQA  A+TQRRL
Sbjct  690  FGARRRSVLSTVGASGATAGLRKTHDGHHGCQASRAITQRRL  731


>gi|289570116|ref|ZP_06450343.1| predicted protein [Mycobacterium tuberculosis T17]
 gi|289543870|gb|EFD47518.1| predicted protein [Mycobacterium tuberculosis T17]
Length=153

 Score = 96.3 bits (238),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 65/129 (51%), Positives = 77/129 (60%), Gaps = 18/129 (13%)

Query  56   AGSGAVVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGAGDAGQAGQQF  115
            A SG VV    L+ G+A +A    D    + + RP +        L G         Q  
Sbjct  42   AQSGGVV----LDRGAANLAPTRIDDRHRVIISRPIDSTRDAVPRLVG---------QGS  88

Query  116  GLGVGVRGESFGARRRLALSTVGASGATAGLRKTHDGHHGCQARGALTQRRL-YIGNPSE  174
            GLG  +    FGARRR  LSTVGASGATAGLR+TH GHHGC+A  A+TQRRL  IGNPS+
Sbjct  89   GLGRSL----FGARRRSVLSTVGASGATAGLRRTHRGHHGCRASRAITQRRLGCIGNPSK  144

Query  175  ITDTRMVHQ  183
            +TDTRMVHQ
Sbjct  145  VTDTRMVHQ  153


>gi|296169593|ref|ZP_06851213.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295895859|gb|EFG75554.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=127

 Score = 45.8 bits (107),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 44/127 (35%), Positives = 57/127 (45%), Gaps = 28/127 (22%)

Query  85   LFVCRPT----EP-DVGDFVGLAGGAGD----AGQAGQQFGLGVGVR---GESFGARRRL  132
            + + RP     EP D   + G++G   D    A  +G+      G R       GA+RRL
Sbjct  1    MIITRPVDSTREPVDGFRWQGISGKLHDSLLAAKPSGEAPSCDTGARLLVRSPCGAQRRL  60

Query  133  ALSTVGASGATAGLRKTHDGHHGCQARGALTQRRLYI---------------GNPSE-IT  176
            ALSTVG    TAG R+TH G    +A  A+ Q+   +                 PSE I 
Sbjct  61   ALSTVGVPRVTAGPRRTHAGRQRRRASRAMNQQPPRVHRRSIQDHRHTGSCASQPSEQIN  120

Query  177  DTRMVHQ  183
            DTRMVHQ
Sbjct  121  DTRMVHQ  127


>gi|169851680|ref|XP_001832529.1| hypothetical protein CC1G_03543 [Coprinopsis cinerea okayama7#130]
 gi|116506383|gb|EAU89278.1| hypothetical protein CC1G_03543 [Coprinopsis cinerea okayama7#130]
Length=166

 Score = 34.3 bits (77),  Expect = 7.6, Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 38/80 (48%), Gaps = 3/80 (3%)

Query  46   DAYRVPVVVAAGSGAVVQVGGLEVGSAAVAGEVADTVAELFVCRPTEPDVGDFVGLAGGA  105
            DA  + V  A  + AV+ VGGL VG   +AG V DT  E  +C    PD      +  GA
Sbjct  18   DAVVLAVFAAQSAVAVIPVGGLCVG---IAGPVNDTCVEGSICCNVSPDRSLCTQVEEGA  74

Query  106  GDAGQAGQQFGLGVGVRGES  125
                +  ++ GL  G+ G S
Sbjct  75   ECPPKVIEENGLCAGIAGPS  94



Lambda     K      H
   0.315    0.134    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 167689013960


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40