BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3226c Length=252 Score E Sequences producing significant alignments: (Bits) Value gi|15610362|ref|NP_217743.1| hypothetical protein Rv3226c [Mycob... 510 6e-143 gi|308377269|ref|ZP_07441701.2| hypothetical protein TMHG_02447 ... 510 7e-143 gi|339633237|ref|YP_004724879.1| hypothetical protein MAF_32380 ... 508 2e-142 gi|240170376|ref|ZP_04749035.1| hypothetical protein MkanA1_1377... 388 4e-106 gi|336459572|gb|EGO38508.1| hypothetical protein MAPs_02260 [Myc... 379 2e-103 gi|118465154|ref|YP_883327.1| hypothetical protein MAV_4181 [Myc... 379 2e-103 gi|41409431|ref|NP_962267.1| hypothetical protein MAP3333c [Myco... 379 2e-103 gi|183981343|ref|YP_001849634.1| hypothetical protein MMAR_1321 ... 374 6e-102 gi|254776619|ref|ZP_05218135.1| hypothetical protein MaviaA2_183... 374 6e-102 gi|342861193|ref|ZP_08717842.1| hypothetical protein MCOL_20017 ... 373 1e-101 gi|254819151|ref|ZP_05224152.1| hypothetical protein MintA_04454... 371 6e-101 gi|118618040|ref|YP_906372.1| hypothetical protein MUL_2559 [Myc... 371 6e-101 gi|296168995|ref|ZP_06850661.1| probable bacteriophage protein [... 364 6e-99 gi|15827345|ref|NP_301608.1| bacteriophage protein [Mycobacteriu... 350 1e-94 gi|108798334|ref|YP_638531.1| hypothetical protein Mmcs_1363 [My... 317 1e-84 gi|126433999|ref|YP_001069690.1| hypothetical protein Mjls_1397 ... 315 3e-84 gi|120402771|ref|YP_952600.1| hypothetical protein Mvan_1772 [My... 312 3e-83 gi|315445570|ref|YP_004078449.1| hypothetical protein Mspyr1_402... 308 4e-82 gi|118470876|ref|YP_886257.1| hypothetical protein MSMEG_1891 [M... 307 1e-81 gi|145225272|ref|YP_001135950.1| hypothetical protein Mflv_4694 ... 305 5e-81 gi|333991596|ref|YP_004524210.1| hypothetical protein JDM601_295... 284 7e-75 gi|54026560|ref|YP_120802.1| hypothetical protein nfa45870 [Noca... 280 1e-73 gi|169630626|ref|YP_001704275.1| hypothetical protein MAB_3545c ... 264 1e-68 gi|296138828|ref|YP_003646071.1| hypothetical protein Tpau_1100 ... 251 6e-65 gi|226305670|ref|YP_002765630.1| hypothetical protein RER_21830 ... 243 1e-62 gi|229489594|ref|ZP_04383457.1| conserved hypothetical protein [... 241 6e-62 gi|343927616|ref|ZP_08767084.1| hypothetical protein GOALK_097_0... 236 2e-60 gi|326383288|ref|ZP_08204976.1| hypothetical protein SCNU_10139 ... 233 2e-59 gi|262203405|ref|YP_003274613.1| hypothetical protein Gbro_3527 ... 232 5e-59 gi|111023302|ref|YP_706274.1| hypothetical protein RHA1_ro06339 ... 226 4e-57 gi|134102868|ref|YP_001108529.1| putative bacteriophage protein ... 223 2e-56 gi|333921436|ref|YP_004495017.1| hypothetical protein AS9A_3779 ... 221 1e-55 gi|312140658|ref|YP_004007994.1| hypothetical protein REQ_33180 ... 218 5e-55 gi|325675712|ref|ZP_08155396.1| hypothetical protein HMPREF0724_... 218 8e-55 gi|257057046|ref|YP_003134878.1| hypothetical protein Svir_30760... 206 3e-51 gi|226365809|ref|YP_002783592.1| hypothetical protein ROP_64000 ... 205 6e-51 gi|300789793|ref|YP_003770084.1| hypothetical protein AMED_7978 ... 198 5e-49 gi|134102867|ref|YP_001108528.1| putative bacteriophage protein ... 192 3e-47 gi|256380285|ref|YP_003103945.1| hypothetical protein Amir_6295 ... 189 3e-46 gi|302530003|ref|ZP_07282345.1| conserved hypothetical protein [... 189 3e-46 gi|271969522|ref|YP_003343718.1| hypothetical protein Sros_8327 ... 181 7e-44 gi|331698911|ref|YP_004335150.1| hypothetical protein Psed_5160 ... 181 7e-44 gi|325002565|ref|ZP_08123677.1| hypothetical protein PseP1_27552... 181 9e-44 gi|296270885|ref|YP_003653517.1| hypothetical protein Tbis_2926 ... 175 7e-42 gi|326332857|ref|ZP_08199114.1| product YoaM [Nocardioidaceae ba... 174 8e-42 gi|315503815|ref|YP_004082702.1| hypothetical protein ML5_3034 [... 173 2e-41 gi|302869703|ref|YP_003838340.1| hypothetical protein Micau_5258... 173 2e-41 gi|117927744|ref|YP_872295.1| hypothetical protein Acel_0536 [Ac... 171 1e-40 gi|336118739|ref|YP_004573511.1| hypothetical protein MLP_30940 ... 169 3e-40 gi|330469948|ref|YP_004407691.1| hypothetical protein VAB18032_0... 168 6e-40 >gi|15610362|ref|NP_217743.1| hypothetical protein Rv3226c [Mycobacterium tuberculosis H37Rv] gi|15842815|ref|NP_337852.1| hypothetical protein MT3323.1 [Mycobacterium tuberculosis CDC1551] gi|31794407|ref|NP_856900.1| hypothetical protein Mb3255c [Mycobacterium bovis AF2122/97] 76 more sequence titles Length=252 Score = 510 bits (1314), Expect = 6e-143, Method: Compositional matrix adjust. Identities = 252/252 (100%), Positives = 252/252 (100%), Gaps = 0/252 (0%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV Sbjct 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 Query 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW Sbjct 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 Query 121 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA 180 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA Sbjct 121 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA 180 Query 181 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE 240 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE Sbjct 181 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE 240 Query 241 PARSQPEQIQLL 252 PARSQPEQIQLL Sbjct 241 PARSQPEQIQLL 252 >gi|308377269|ref|ZP_07441701.2| hypothetical protein TMHG_02447 [Mycobacterium tuberculosis SUMu008] gi|308379453|ref|ZP_07486335.2| hypothetical protein TMJG_03411 [Mycobacterium tuberculosis SUMu010] gi|308348337|gb|EFP37188.1| hypothetical protein TMHG_02447 [Mycobacterium tuberculosis SUMu008] gi|308356916|gb|EFP45767.1| hypothetical protein TMJG_03411 [Mycobacterium tuberculosis SUMu010] Length=262 Score = 510 bits (1313), Expect = 7e-143, Method: Compositional matrix adjust. Identities = 252/252 (100%), Positives = 252/252 (100%), Gaps = 0/252 (0%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV Sbjct 11 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 70 Query 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW Sbjct 71 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 130 Query 121 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA 180 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA Sbjct 131 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA 190 Query 181 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE 240 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE Sbjct 191 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE 250 Query 241 PARSQPEQIQLL 252 PARSQPEQIQLL Sbjct 251 PARSQPEQIQLL 262 >gi|339633237|ref|YP_004724879.1| hypothetical protein MAF_32380 [Mycobacterium africanum GM041182] gi|339332593|emb|CCC28308.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=252 Score = 508 bits (1309), Expect = 2e-142, Method: Compositional matrix adjust. Identities = 251/252 (99%), Positives = 252/252 (100%), Gaps = 0/252 (0%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSR+SEPDDEPTRRV Sbjct 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRYSEPDDEPTRRV 60 Query 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW Sbjct 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 Query 121 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA 180 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA Sbjct 121 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA 180 Query 181 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE 240 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE Sbjct 181 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE 240 Query 241 PARSQPEQIQLL 252 PARSQPEQIQLL Sbjct 241 PARSQPEQIQLL 252 >gi|240170376|ref|ZP_04749035.1| hypothetical protein MkanA1_13770 [Mycobacterium kansasii ATCC 12478] Length=255 Score = 388 bits (997), Expect = 4e-106, Method: Compositional matrix adjust. Identities = 193/255 (76%), Positives = 215/255 (85%), Gaps = 3/255 (1%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTS--YNVAPTDTIATVVSRHSEPDDEPTR 58 MCGRFAVTTDPA+LAEKI AIDEATG G + YNVAPT+TI TVV+RHSEPDD+P+R Sbjct 1 MCGRFAVTTDPARLAEKIKAIDEATGAGSTAEAPNYNVAPTNTIMTVVARHSEPDDQPSR 60 Query 59 RVRLMRWGLIPSWIKAGP-GGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGW 117 RVRLMRWGL+P W KAGP GG PD KGP LINARADKVATSPAFR + + KRCLVPMDGW Sbjct 61 RVRLMRWGLVPPWAKAGPDGGLPDTKGPLLINARADKVATSPAFRDSAQRKRCLVPMDGW 120 Query 118 YEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVG 177 YEW+ +PDA PG+ AKTPFFLHR DG +F AGLWSVWK +SA PLLSCT+ITTDAVG Sbjct 121 YEWQANPDAVPGQKAAKTPFFLHRRDGEPVFMAGLWSVWKPDKSAAPLLSCTIITTDAVG 180 Query 178 ELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPE 237 AEIHDRMPL+LAE DWD WLNPDAP DPEL+ARPPDV DI LR+VSTLVN+VRNNGPE Sbjct 181 PTAEIHDRMPLMLAESDWDAWLNPDAPLDPELVARPPDVHDIELRRVSTLVNSVRNNGPE 240 Query 238 LLEPARSQPEQIQLL 252 L+E A Q EQ++LL Sbjct 241 LIEAAERQSEQMKLL 255 >gi|336459572|gb|EGO38508.1| hypothetical protein MAPs_02260 [Mycobacterium avium subsp. paratuberculosis S397] Length=257 Score = 379 bits (974), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 185/254 (73%), Positives = 211/254 (84%), Gaps = 2/254 (0%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTS--YNVAPTDTIATVVSRHSEPDDEPTR 58 MCGRFAVTTDPAQLA+KI AIDE TG T+ YNVAPT TIATVVSRHSEP+DEPTR Sbjct 4 MCGRFAVTTDPAQLAQKIKAIDETTGAAPSDTAPNYNVAPTSTIATVVSRHSEPEDEPTR 63 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 RVRLMRWGL+P W KAGP GAP+ KGP LINARADKV +SPAFR++ +SKRCL+PMDG+Y Sbjct 64 RVRLMRWGLVPPWAKAGPDGAPETKGPMLINARADKVTSSPAFRASAKSKRCLIPMDGYY 123 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGE 178 EWRV+ DA G+ KTPFF++ DG LF AGLWSVWK + APPLLSCT+ITTDA GE Sbjct 124 EWRVNSDAAAGKKPRKTPFFMYSEDGEPLFMAGLWSVWKPAKDAPPLLSCTIITTDAPGE 183 Query 179 LAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPEL 238 LA+IHDRMPL++ E DWD WL+PDAP D ELL RPPDV I +R+VSTLVNNVRNNGPEL Sbjct 184 LAQIHDRMPLVMPERDWDRWLDPDAPVDEELLTRPPDVHAIGMREVSTLVNNVRNNGPEL 243 Query 239 LEPARSQPEQIQLL 252 LEPA+ +PEQ +LL Sbjct 244 LEPAKPEPEQARLL 257 >gi|118465154|ref|YP_883327.1| hypothetical protein MAV_4181 [Mycobacterium avium 104] gi|118166441|gb|ABK67338.1| conserved hypothetical protein [Mycobacterium avium 104] Length=254 Score = 379 bits (974), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 185/254 (73%), Positives = 211/254 (84%), Gaps = 2/254 (0%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTS--YNVAPTDTIATVVSRHSEPDDEPTR 58 MCGRFAVTTDPAQLA+KI AIDE TG T+ YNVAPT TIATVVSRHSEP+DEPTR Sbjct 1 MCGRFAVTTDPAQLAQKIKAIDETTGAAPSDTAPNYNVAPTSTIATVVSRHSEPEDEPTR 60 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 RVRLMRWGL+P W KAGPGGAP+ KGP LINARADKV +SPAFR++ +SKRCL+PMDG+Y Sbjct 61 RVRLMRWGLVPPWAKAGPGGAPETKGPMLINARADKVTSSPAFRASAKSKRCLIPMDGYY 120 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGE 178 EWRV+ D G+ KTPFF++ DG LF AGLWSVWK + APPLLSCT+ITTDA GE Sbjct 121 EWRVNSDPAAGKKPRKTPFFMYSEDGEPLFMAGLWSVWKPAKDAPPLLSCTIITTDAPGE 180 Query 179 LAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPEL 238 LA+IHDRMPL++ E DWD WL+PDAP D ELL RPPDV I +R+VSTLVNNVRNNGPEL Sbjct 181 LAQIHDRMPLVMPERDWDRWLDPDAPVDEELLTRPPDVHAIRMREVSTLVNNVRNNGPEL 240 Query 239 LEPARSQPEQIQLL 252 LEPA+ +PEQ +LL Sbjct 241 LEPAKPEPEQARLL 254 >gi|41409431|ref|NP_962267.1| hypothetical protein MAP3333c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398262|gb|AAS05883.1| hypothetical protein MAP_3333c [Mycobacterium avium subsp. paratuberculosis K-10] Length=254 Score = 379 bits (974), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 185/254 (73%), Positives = 211/254 (84%), Gaps = 2/254 (0%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTS--YNVAPTDTIATVVSRHSEPDDEPTR 58 MCGRFAVTTDPAQLA+KI AIDE TG T+ YNVAPT TIATVVSRHSEP+DEPTR Sbjct 1 MCGRFAVTTDPAQLAQKIKAIDETTGAAPSDTAPNYNVAPTSTIATVVSRHSEPEDEPTR 60 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 RVRLMRWGL+P W KAGP GAP+ KGP LINARADKV +SPAFR++ +SKRCL+PMDG+Y Sbjct 61 RVRLMRWGLVPPWAKAGPDGAPETKGPMLINARADKVTSSPAFRASAKSKRCLIPMDGYY 120 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGE 178 EWRV+ DA G+ KTPFF++ DG LF AGLWSVWK + APPLLSCT+ITTDA GE Sbjct 121 EWRVNSDAAAGKKPRKTPFFMYSEDGEPLFMAGLWSVWKPAKDAPPLLSCTIITTDAPGE 180 Query 179 LAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPEL 238 LA+IHDRMPL++ E DWD WL+PDAP D ELL RPPDV I +R+VSTLVNNVRNNGPEL Sbjct 181 LAQIHDRMPLVMPERDWDRWLDPDAPVDEELLTRPPDVHAIGMREVSTLVNNVRNNGPEL 240 Query 239 LEPARSQPEQIQLL 252 LEPA+ +PEQ +LL Sbjct 241 LEPAKPEPEQARLL 254 >gi|183981343|ref|YP_001849634.1| hypothetical protein MMAR_1321 [Mycobacterium marinum M] gi|183174669|gb|ACC39779.1| conserved hypothetical protein [Mycobacterium marinum M] Length=260 Score = 374 bits (961), Expect = 6e-102, Method: Compositional matrix adjust. Identities = 187/257 (73%), Positives = 208/257 (81%), Gaps = 5/257 (1%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCG--GGKTSYNVAPTDTIATVVSRHSEPDDEPTR 58 MCGRFAVTTDPA LAEKI AIDEA+G G +YNVAPTD IATVV+RHSEPDDEPTR Sbjct 4 MCGRFAVTTDPALLAEKINAIDEASGAASDGFAPNYNVAPTDMIATVVTRHSEPDDEPTR 63 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 RVR+MRWG +PSW K GP GAP+ KGP LINARA+ VATSPAFR A + KRCLVPMDGWY Sbjct 64 RVRMMRWGFVPSWAKPGPQGAPEGKGPLLINARAETVATSPAFRGAAQHKRCLVPMDGWY 123 Query 119 EWRVDPDATPG---RPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDA 175 EWR +PD G + AKTPFF+HR DG + AGLWSVWK +A PLLS T+ITTDA Sbjct 124 EWRANPDVLSGAGSKKVAKTPFFIHRADGNTVCMAGLWSVWKPNNAAAPLLSATIITTDA 183 Query 176 VGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNG 235 GELA IHDRMPL+L+E DWD WLNPDAP DP LL+ PPDVRD+A R+VSTLVN+VRNNG Sbjct 184 AGELAGIHDRMPLMLSEGDWDAWLNPDAPLDPALLSHPPDVRDMAFREVSTLVNSVRNNG 243 Query 236 PELLEPARSQPEQIQLL 252 PELLEPA+ QPEQI LL Sbjct 244 PELLEPAKPQPEQITLL 260 >gi|254776619|ref|ZP_05218135.1| hypothetical protein MaviaA2_18391 [Mycobacterium avium subsp. avium ATCC 25291] Length=254 Score = 374 bits (961), Expect = 6e-102, Method: Compositional matrix adjust. Identities = 183/254 (73%), Positives = 209/254 (83%), Gaps = 2/254 (0%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTS--YNVAPTDTIATVVSRHSEPDDEPTR 58 MCGRFAVTTDPAQLA+KI AIDE TG T+ YNVAPT TIATVVSRHSEP+DEPTR Sbjct 1 MCGRFAVTTDPAQLAQKIKAIDETTGAAPSDTAPNYNVAPTSTIATVVSRHSEPEDEPTR 60 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 RVRLMRWGL+P W KAG GAP+ KGP LINARADKV +SPAFR + +SKRCL+PMDG+Y Sbjct 61 RVRLMRWGLVPPWAKAGRDGAPETKGPMLINARADKVTSSPAFRVSAKSKRCLIPMDGYY 120 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGE 178 EWR++ DA G+ KTPFF++ DG LF AGLWSVWK + APPLLSCT+ITTDA GE Sbjct 121 EWRINSDAAAGKKPRKTPFFMYSEDGEPLFMAGLWSVWKPAKDAPPLLSCTIITTDAPGE 180 Query 179 LAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPEL 238 LA+IHDRMPL++ E DWD WL+PDAP D ELL RPPDV I +R+VSTLVNNVRNNGPEL Sbjct 181 LAQIHDRMPLVMPERDWDRWLDPDAPVDEELLTRPPDVHAIRMREVSTLVNNVRNNGPEL 240 Query 239 LEPARSQPEQIQLL 252 LEPA+ +PEQ +LL Sbjct 241 LEPAKPEPEQARLL 254 >gi|342861193|ref|ZP_08717842.1| hypothetical protein MCOL_20017 [Mycobacterium colombiense CECT 3035] gi|342131637|gb|EGT84907.1| hypothetical protein MCOL_20017 [Mycobacterium colombiense CECT 3035] Length=254 Score = 373 bits (958), Expect = 1e-101, Method: Compositional matrix adjust. Identities = 184/254 (73%), Positives = 208/254 (82%), Gaps = 2/254 (0%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTS--YNVAPTDTIATVVSRHSEPDDEPTR 58 MCGRFAVTTDPA LAEKI AIDEATG G + YNVAPT TIATVVSRHSEP+D+PTR Sbjct 1 MCGRFAVTTDPALLAEKIKAIDEATGAEGASNAPNYNVAPTSTIATVVSRHSEPEDQPTR 60 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 RVRLMRWGL+P W KAG GAPDAKGP LINARADKV TSPAFR++ +SKRCL+PMDG+Y Sbjct 61 RVRLMRWGLVPPWAKAGADGAPDAKGPMLINARADKVTTSPAFRASAKSKRCLIPMDGYY 120 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGE 178 EWRV+ D G+ KTPFF++ DG LF AGLWSVWK + A PLLSCT+ITTDA GE Sbjct 121 EWRVNSDDAAGKKTRKTPFFMYSEDGEPLFMAGLWSVWKPAKDASPLLSCTIITTDAPGE 180 Query 179 LAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPEL 238 LA+IHDRMPL+L E DWD WL+PDA D LLAR PDVR I +R+VSTLVNNVRNNGP+L Sbjct 181 LAQIHDRMPLVLPERDWDRWLDPDAAIDEGLLARTPDVRAIRMREVSTLVNNVRNNGPQL 240 Query 239 LEPARSQPEQIQLL 252 LEPA QPEQ+++L Sbjct 241 LEPAEPQPEQMKIL 254 >gi|254819151|ref|ZP_05224152.1| hypothetical protein MintA_04454 [Mycobacterium intracellulare ATCC 13950] Length=254 Score = 371 bits (952), Expect = 6e-101, Method: Compositional matrix adjust. Identities = 180/254 (71%), Positives = 210/254 (83%), Gaps = 2/254 (0%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTS--YNVAPTDTIATVVSRHSEPDDEPTR 58 MCGRFAVTTDPA LA+KI AIDE TG ++ YNVAPT TIATVVSRHSEP+DEPTR Sbjct 1 MCGRFAVTTDPALLAQKIKAIDETTGADADSSAPNYNVAPTSTIATVVSRHSEPEDEPTR 60 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 RVRLMRWGL+P W KAG GAP+ KGP LINARADKV +SPAFR++ +SKRCL+PMDG+Y Sbjct 61 RVRLMRWGLVPPWAKAGADGAPETKGPMLINARADKVTSSPAFRTSAKSKRCLIPMDGYY 120 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGE 178 EWRV+ DA G+ + KTPFF++R DG LF AGLWSVWK + A PLLSCT+ITTDA GE Sbjct 121 EWRVNSDAAAGKKSRKTPFFMYREDGEPLFMAGLWSVWKPAKDASPLLSCTIITTDAPGE 180 Query 179 LAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPEL 238 LA+IHDRMPL++ E DWD WL+PDAP D +LLAR PDVR I R+VSTLVNNVRNNGP+L Sbjct 181 LAQIHDRMPLVMPERDWDRWLDPDAPIDEKLLARTPDVRAIRTREVSTLVNNVRNNGPQL 240 Query 239 LEPARSQPEQIQLL 252 LEPA +PEQ+++L Sbjct 241 LEPAEPEPEQMKIL 254 >gi|118618040|ref|YP_906372.1| hypothetical protein MUL_2559 [Mycobacterium ulcerans Agy99] gi|118570150|gb|ABL04901.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=257 Score = 371 bits (952), Expect = 6e-101, Method: Compositional matrix adjust. Identities = 186/257 (73%), Positives = 206/257 (81%), Gaps = 5/257 (1%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCG--GGKTSYNVAPTDTIATVVSRHSEPDDEPTR 58 MCGRFAV TDPA LAEKI AIDEA+G G +YNVAPTD IATVV+RHSEPDDEPTR Sbjct 1 MCGRFAVITDPALLAEKINAIDEASGAASDGFAPNYNVAPTDMIATVVTRHSEPDDEPTR 60 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 RVR+MRWG +PSW K GP GAP+ KGP LINARA+ VATSPAFR A + KRCLVPMDGWY Sbjct 61 RVRMMRWGFVPSWAKPGPQGAPEGKGPLLINARAETVATSPAFRGAAQHKRCLVPMDGWY 120 Query 119 EWRVDPDATPG---RPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDA 175 EWR +PD G + AKTPFF+HR DG + AGLW VWK +A PLLS T+ITTDA Sbjct 121 EWRANPDVLSGAGSKKVAKTPFFIHRADGNTVCMAGLWPVWKPNNAAAPLLSATIITTDA 180 Query 176 VGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNG 235 GELA IHDRMPL+L+E DWD WLNPDAP DP LL+ PPDVRDIA R+VSTLVN+VRNNG Sbjct 181 AGELAGIHDRMPLMLSEGDWDAWLNPDAPLDPALLSHPPDVRDIAFREVSTLVNSVRNNG 240 Query 236 PELLEPARSQPEQIQLL 252 PELLEPA+ QPEQI LL Sbjct 241 PELLEPAKPQPEQITLL 257 >gi|296168995|ref|ZP_06850661.1| probable bacteriophage protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896337|gb|EFG75993.1| probable bacteriophage protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=322 Score = 364 bits (935), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 181/254 (72%), Positives = 208/254 (82%), Gaps = 3/254 (1%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGC--GGGKTSYNVAPTDTIATVVSRHSEPDDEPTR 58 MCGRFAVTTDPA LA+KI AIDEATG G G +YNVAPT TIATVVSRH++PDDEPTR Sbjct 70 MCGRFAVTTDPALLAQKIKAIDEATGASEGAGAPNYNVAPTSTIATVVSRHADPDDEPTR 129 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 RVRLMRWGL+P W KAG GAP+ KGP LINARADKV TSPAFR++ +SKRCL+PMDG+Y Sbjct 130 RVRLMRWGLVPPWAKAGEDGAPETKGPMLINARADKVTTSPAFRASAKSKRCLIPMDGYY 189 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGE 178 EWRV+ D G+ + KTPFF++R DG LF AGLWSVWK + PLLSCT+ITTDA GE Sbjct 190 EWRVN-DPAAGKKSRKTPFFMYREDGEPLFMAGLWSVWKPAKEGSPLLSCTIITTDAPGE 248 Query 179 LAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPEL 238 LAEIHDRMPL++ E +WD WL+PD P D LL RPPDVR I +R+VSTLVNNVRNNGP+L Sbjct 249 LAEIHDRMPLVVPEGEWDRWLDPDGPIDQALLTRPPDVRGIRMREVSTLVNNVRNNGPQL 308 Query 239 LEPARSQPEQIQLL 252 LEPA +PEQ +LL Sbjct 309 LEPAEPEPEQARLL 322 >gi|15827345|ref|NP_301608.1| bacteriophage protein [Mycobacterium leprae TN] gi|221229823|ref|YP_002503239.1| putative bacteriophage protein [Mycobacterium leprae Br4923] gi|13092894|emb|CAC30302.1| putative bacteriophage protein [Mycobacterium leprae] gi|219932930|emb|CAR70887.1| putative bacteriophage protein [Mycobacterium leprae Br4923] Length=252 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 178/252 (71%), Positives = 198/252 (79%), Gaps = 3/252 (1%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 +CGRFAV T A LAEKI A+DEAT +YNVAPT IATVVSRHSE D EPTRRV Sbjct 4 VCGRFAVITSTALLAEKIKAVDEATV---DAPNYNVAPTVPIATVVSRHSESDYEPTRRV 60 Query 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 RLMRWGLIP WIKA G PD KGP LIN RADKVATSP FR++ +SKRCLVPMDGWYEW Sbjct 61 RLMRWGLIPPWIKASSDGGPDIKGPLLINVRADKVATSPVFRNSAKSKRCLVPMDGWYEW 120 Query 121 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA 180 +V+ D+ G+ + TPFF++R DGA LF AGLWSVW+ S+ LLSCT+ITTDAVGELA Sbjct 121 QVNVDSALGKKASTTPFFINRDDGATLFMAGLWSVWQPANSSAMLLSCTIITTDAVGELA 180 Query 181 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE 240 EIHDRMPL+LAE DWD WLNP P DP+LLAR PDV DI +R VSTLVN+VRNNGPELLE Sbjct 181 EIHDRMPLILAEYDWDVWLNPYIPLDPQLLARSPDVHDIDVRPVSTLVNSVRNNGPELLE 240 Query 241 PARSQPEQIQLL 252 P QP QI LL Sbjct 241 PVLLQPGQITLL 252 >gi|108798334|ref|YP_638531.1| hypothetical protein Mmcs_1363 [Mycobacterium sp. MCS] gi|119867431|ref|YP_937383.1| hypothetical protein Mkms_1381 [Mycobacterium sp. KMS] gi|108768753|gb|ABG07475.1| protein of unknown function DUF159 [Mycobacterium sp. MCS] gi|119693520|gb|ABL90593.1| protein of unknown function DUF159 [Mycobacterium sp. KMS] Length=266 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 167/266 (63%), Positives = 191/266 (72%), Gaps = 14/266 (5%) Query 1 MCGRFAVTTDPAQLAEKITAIDEAT-----------GCGGGKTSYNVAPTDTIATVVSRH 49 MCGRFAVTTDPA LAEKI AIDE G +YNVAPT TI TVV RH Sbjct 1 MCGRFAVTTDPALLAEKIKAIDETNAAPKDSGPIYPGPNYPGPNYNVAPTTTITTVVKRH 60 Query 50 SEPDDEPTRRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKR 109 SEP+DE RR+R MRWGLIP W+K+ GAPD KGP LINARADKV TSPAFRS+ +SKR Sbjct 61 SEPEDEAARRLRSMRWGLIPPWVKSTDDGAPDNKGPLLINARADKVTTSPAFRSSAKSKR 120 Query 110 CLVPMDGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWK---SYRSAPPLL 166 CLVPMDGWYEWR +P + AKTPFF++ DG LF AGLW+ W+ + + APPLL Sbjct 121 CLVPMDGWYEWRPNPAEGGKKKAAKTPFFMYGADGEPLFMAGLWTTWRPKDAPKEAPPLL 180 Query 167 SCTVITTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVST 226 SCT+ITTDA G LAEIHDRMPL ++ EDWD WL+PDAP D LL D+ I +RQVS Sbjct 181 SCTIITTDAAGPLAEIHDRMPLTISAEDWDRWLDPDAPIDEGLLRGHGDLDRIEVRQVSR 240 Query 227 LVNNVRNNGPELLEPARSQPEQIQLL 252 LVN+VRNNGPEL+ PA +PEQ LL Sbjct 241 LVNSVRNNGPELIAPAEPEPEQATLL 266 >gi|126433999|ref|YP_001069690.1| hypothetical protein Mjls_1397 [Mycobacterium sp. JLS] gi|126233799|gb|ABN97199.1| protein of unknown function DUF159 [Mycobacterium sp. JLS] Length=261 Score = 315 bits (808), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 165/261 (64%), Positives = 191/261 (74%), Gaps = 9/261 (3%) Query 1 MCGRFAVTTDPAQLAEKITAIDEAT------GCGGGKTSYNVAPTDTIATVVSRHSEPDD 54 MCGRFAVTTDPA LAEKI AIDE G +YNVAPT TI TVV RHSEP+D Sbjct 1 MCGRFAVTTDPALLAEKIKAIDETNAAPKDPGPNYPGPNYNVAPTTTITTVVKRHSEPED 60 Query 55 EPTRRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPM 114 E RR+R MRWGLIP W+K+ GAPD KGP LINARADKV TSPAFRS+ +S+RCLVPM Sbjct 61 EAARRLRSMRWGLIPPWVKSTDDGAPDNKGPLLINARADKVTTSPAFRSSAKSRRCLVPM 120 Query 115 DGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWK---SYRSAPPLLSCTVI 171 DGWYEWR +P + AKTPFF++ DG LF AGLW+ W+ + + APPLLSCT+I Sbjct 121 DGWYEWRPNPAEGGKKKAAKTPFFMYGADGEPLFMAGLWTTWRPRDAPKEAPPLLSCTII 180 Query 172 TTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNV 231 TTDA G LAEIHDRMPL ++ EDWD WL+PDAP D LL D+ I +R+VS LVN+V Sbjct 181 TTDAAGPLAEIHDRMPLTVSAEDWDRWLDPDAPIDEGLLRGHGDLDRIEVREVSRLVNSV 240 Query 232 RNNGPELLEPARSQPEQIQLL 252 RNNGPEL+ PA +PEQ LL Sbjct 241 RNNGPELIAPAEPEPEQATLL 261 >gi|120402771|ref|YP_952600.1| hypothetical protein Mvan_1772 [Mycobacterium vanbaalenii PYR-1] gi|119955589|gb|ABM12594.1| protein of unknown function DUF159 [Mycobacterium vanbaalenii PYR-1] Length=252 Score = 312 bits (799), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 159/256 (63%), Positives = 189/256 (74%), Gaps = 11/256 (4%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGRFAVTTDPA LAEKI AIDE +YNVAPT ++ATVV RH+EPDDE TRR+ Sbjct 4 MCGRFAVTTDPALLAEKIKAIDETAAAKTDGPNYNVAPTTSVATVVKRHTEPDDESTRRI 63 Query 61 RLMRWGLIPSWIKAGPGGAPDAK-GPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYE 119 RLMRWGL+P W KAG G+PD K GP LINAR+DKV +SPAFRS+ ++KRCLVPMDGWYE Sbjct 64 RLMRWGLVPPWAKAGDDGSPDTKSGPLLINARSDKVTSSPAFRSSAKAKRCLVPMDGWYE 123 Query 120 WRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWK---SYRSAPPLLSCTVITTDAV 176 W+ G+ AKTP+++H DG LF AGLWS W+ + + PLLSCT+ITTDAV Sbjct 124 WK-------GQKGAKTPYYMHTRDGEPLFMAGLWSTWRPKGADKDVKPLLSCTIITTDAV 176 Query 177 GELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGP 236 G LA+IHDRMPL ++ DWD WL+PDAP D LL D+ I +R+VS LVN+VRNNGP Sbjct 177 GPLADIHDRMPLTISAPDWDRWLDPDAPVDEGLLRGHGDLDRIEVREVSRLVNSVRNNGP 236 Query 237 ELLEPARSQPEQIQLL 252 EL+EP Q EQ LL Sbjct 237 ELIEPVTPQAEQGTLL 252 >gi|315445570|ref|YP_004078449.1| hypothetical protein Mspyr1_40270 [Mycobacterium sp. Spyr1] gi|315263873|gb|ADU00615.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1] Length=264 Score = 308 bits (790), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 160/268 (60%), Positives = 192/268 (72%), Gaps = 23/268 (8%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGK------------TSYNVAPTDTIATVVSR 48 MCGRFAVTTDPA LAEKI AIDE+T + +YNVAPT T+ATVV R Sbjct 4 MCGRFAVTTDPALLAEKIKAIDESTAASKDRPTADYPTANYPTANYNVAPTTTVATVVKR 63 Query 49 HSEPDDEPTRRVRLMRWGLIPSWIKAGPGGAPDAK-GPPLINARADKVATSPAFRSAVRS 107 HSEP+DE TRRVRLMRWGL+P W+KAG G PD K GP LINAR+DKV +SPAFRS+ ++ Sbjct 64 HSEPEDESTRRVRLMRWGLVPPWVKAGEDGGPDTKSGPLLINARSDKVTSSPAFRSSAKT 123 Query 108 KRCLVPMDGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWK---SYRSAPP 164 KRCLVPMDGWYEW+ G AKTP++++ DG LF AGLW+ W+ + + A P Sbjct 124 KRCLVPMDGWYEWK-------GTKGAKTPYYMYAGDGVPLFMAGLWTTWRPKDAPKGAKP 176 Query 165 LLSCTVITTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQV 224 LLSCT+ITTDA +LA+IHDRMPL ++E DWD WL+PDAP D LL D+ I +R+V Sbjct 177 LLSCTIITTDAAAQLADIHDRMPLTISEPDWDRWLDPDAPIDEGLLRGHGDLDRIEIREV 236 Query 225 STLVNNVRNNGPELLEPARSQPEQIQLL 252 S LVN+VRNNGPEL+EP Q EQ LL Sbjct 237 SRLVNSVRNNGPELIEPVTPQAEQGTLL 264 >gi|118470876|ref|YP_886257.1| hypothetical protein MSMEG_1891 [Mycobacterium smegmatis str. MC2 155] gi|118172163|gb|ABK73059.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=262 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 155/260 (60%), Positives = 191/260 (74%), Gaps = 9/260 (3%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGK-----TSYNVAPTDTIATVVSRHSEPDDE 55 MCGRFAVTTDPA LA+KI AIDE G +YNVAPT TI +VV RH+EP+DE Sbjct 4 MCGRFAVTTDPALLAQKIQAIDETAAASSGDKDVAGANYNVAPTTTITSVVKRHTEPEDE 63 Query 56 PTRRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMD 115 TRR+R MRWGLIP W+KA G+P+ KGP LINARA+KV TSPAFRS+ +S+RCL+PMD Sbjct 64 STRRLRSMRWGLIPPWVKATEDGSPENKGPLLINARAEKVTTSPAFRSSAKSRRCLIPMD 123 Query 116 GWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWK---SYRSAPPLLSCTVIT 172 GWYEWR +P A G+ +KTPFF++ DG LF AGLW+ W+ + + PL+SCT+IT Sbjct 124 GWYEWRPNP-AADGKKASKTPFFMYGVDGEPLFMAGLWTTWRPPGAPKDHAPLVSCTIIT 182 Query 173 TDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVR 232 TDA G LAEIHDRMPL ++ +DWD WL+PDAP D LL D+ I +R+VS LVN++R Sbjct 183 TDAAGPLAEIHDRMPLSISRDDWDRWLDPDAPVDEGLLRGHGDLDRIGVREVSRLVNSIR 242 Query 233 NNGPELLEPARSQPEQIQLL 252 NNGPEL+EPA + EQ L Sbjct 243 NNGPELIEPAEPEAEQAGLF 262 >gi|145225272|ref|YP_001135950.1| hypothetical protein Mflv_4694 [Mycobacterium gilvum PYR-GCK] gi|145217758|gb|ABP47162.1| protein of unknown function DUF159 [Mycobacterium gilvum PYR-GCK] Length=268 Score = 305 bits (780), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 159/272 (59%), Positives = 191/272 (71%), Gaps = 27/272 (9%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGK------------TSYNVAPTDTIATVVSR 48 MCGRFAVTTDPA LAEKI AIDE+T + +YNVAPT +ATVV R Sbjct 4 MCGRFAVTTDPALLAEKIKAIDESTAASKDRPTADYPTANYPTANYNVAPTTAVATVVKR 63 Query 49 HSEPDDEPTRRVRLMRWGLIPSWIKAGPGGAPDAK-GPPLINARADKVATSPAFRSAVRS 107 HSEP+DE TRRVRLMRWGL+P W+KAG G PD K GP LINAR+DKV +SPAFRS+ ++ Sbjct 64 HSEPEDESTRRVRLMRWGLVPPWVKAGEDGGPDTKSGPLLINARSDKVTSSPAFRSSAKT 123 Query 108 KRCLVPMDGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWK-------SYR 160 KRCLVPMDGWYEW+ G AKTP++++ DG LF AGLW+ W+ + + Sbjct 124 KRCLVPMDGWYEWK-------GTKGAKTPYYMYAGDGEPLFMAGLWTTWRPKPADTDAPK 176 Query 161 SAPPLLSCTVITTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIA 220 A PLLSCT+ITTDA +LA+IHDRMPL ++E DWD WL+PDAP D LL D+ I Sbjct 177 DAKPLLSCTIITTDAAAQLADIHDRMPLTISEPDWDRWLDPDAPIDEGLLRGHGDLDRIE 236 Query 221 LRQVSTLVNNVRNNGPELLEPARSQPEQIQLL 252 +R+VS LVN+VRNNGPEL+EP Q EQ LL Sbjct 237 IREVSRLVNSVRNNGPELIEPVTPQAEQGTLL 268 >gi|333991596|ref|YP_004524210.1| hypothetical protein JDM601_2956 [Mycobacterium sp. JDM601] gi|333487564|gb|AEF36956.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=249 Score = 284 bits (727), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 158/252 (63%), Positives = 184/252 (74%), Gaps = 3/252 (1%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGRFAVTTDPA LAE+I AI+E +YNVAPTD +ATVVSRH++P D PTRRV Sbjct 1 MCGRFAVTTDPALLAERIEAINEVPADADPGPNYNVAPTDAVATVVSRHTDPGDAPTRRV 60 Query 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 RLMRWGL+P W KAGP GAP GP LINARADK+ TSPA+RSA +RCL+PMDG+YEW Sbjct 61 RLMRWGLVPPWTKAGPDGAPAGGGPLLINARADKLTTSPAYRSAAERRRCLIPMDGFYEW 120 Query 121 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA 180 R +A G+ KTPF++H DG +LF AGLWSVW+ PLLS T+ITT A GE+A Sbjct 121 RA--EAPGGKKARKTPFYIHGDDG-MLFAAGLWSVWRGGPRCDPLLSVTIITTGAAGEIA 177 Query 181 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE 240 IHDRMPLLL E+ WD WL+PD P D LL P + LR+VSTLVN+VRNNGPEL+ Sbjct 178 GIHDRMPLLLPEKRWDAWLDPDTPLDTALLDSSPQAPGLVLREVSTLVNSVRNNGPELIA 237 Query 241 PARSQPEQIQLL 252 A QPEQ LL Sbjct 238 EAAPQPEQGYLL 249 >gi|54026560|ref|YP_120802.1| hypothetical protein nfa45870 [Nocardia farcinica IFM 10152] gi|54018068|dbj|BAD59438.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=265 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 154/267 (58%), Positives = 186/267 (70%), Gaps = 17/267 (6%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCG----GGKTSYNVAPTDTIATVVSRH--SEPDD 54 MCGR+A TT+PA+LA ++ AIDE G G G +YNVAPT+ + T+VSRH PDD Sbjct 1 MCGRYATTTNPARLAVELDAIDETGGDGATPTGDFATYNVAPTNRVLTIVSRHDREHPDD 60 Query 55 EPTRRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPM 114 +PT R+R MRWGLIP+W KA G P AKG PL NARADK A++P+FR AV+ +RCLVPM Sbjct 61 DPTLRIRRMRWGLIPAWTKAAEPGVP-AKGKPLFNARADKAASTPSFRDAVKYRRCLVPM 119 Query 115 DGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAP---PLLSCTVI 171 DGWYEW V+PD G+ K P+F+ +G L+ AGLWSVW+ R+ P PLLSCT++ Sbjct 120 DGWYEWLVEPDPAGGKKVVKRPYFMTDANGGRLYMAGLWSVWRD-RAQPASEPLLSCTIL 178 Query 172 TTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPD--VRDIALRQVSTLVN 229 TTDAVG+LA IHDRMPL + WD WL+PD P ELLA P + VRDI R VS LVN Sbjct 179 TTDAVGDLARIHDRMPLPMPRAHWDAWLDPDHPAPAELLATPGEDVVRDIVARPVSPLVN 238 Query 230 NVRNNGPELL----EPARSQPEQIQLL 252 NV+NNGPELL EPA QI LL Sbjct 239 NVKNNGPELLAPIDEPAAEPAGQISLL 265 >gi|169630626|ref|YP_001704275.1| hypothetical protein MAB_3545c [Mycobacterium abscessus ATCC 19977] gi|169242593|emb|CAM63621.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=251 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 146/258 (57%), Positives = 178/258 (69%), Gaps = 13/258 (5%) Query 1 MCGRFAVTTDPAQLAEKITAIDE-ATGCGGGKT--SYNVAPTDTIATVVSRHSEPDDEPT 57 MCGR+AVT DPA LA +I A+DE AT T +YNVAPTD + VV+RH +P D PT Sbjct 1 MCGRYAVTIDPALLAAEIDAVDETATSAVQSPTIPNYNVAPTDPVLAVVARHHQPGDVPT 60 Query 58 RRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGW 117 RR+R MRWGL+P+W A G P++KG PLINARA+ + T+ FR+A +SKRCLVPMDGW Sbjct 61 RRIRAMRWGLVPNWATARQDGRPESKGAPLINARAETLTTAATFRAAAQSKRCLVPMDGW 120 Query 118 YEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVG 177 YEWR + AKT F+++ +G LF AGLWSVWK + A PLLSCT++TTDAVG Sbjct 121 YEWR-------KQEGAKTAFYMNAGEGKRLFAAGLWSVWKPAKGAVPLLSCTIVTTDAVG 173 Query 178 ELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPE 237 L EIHDRMPL+L + WD WL+PD DP LL P I R+VS+LVN+V NNGPE Sbjct 174 PLREIHDRMPLMLGADSWDSWLDPDRELDPGLLRAPGSAAGIETRRVSSLVNSVANNGPE 233 Query 238 LLEP---ARSQPEQIQLL 252 LL P A + EQI LL Sbjct 234 LLVPDDGAAAVGEQITLL 251 >gi|296138828|ref|YP_003646071.1| hypothetical protein Tpau_1100 [Tsukamurella paurometabola DSM 20162] gi|296026962|gb|ADG77732.1| protein of unknown function DUF159 [Tsukamurella paurometabola DSM 20162] Length=254 Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 140/261 (54%), Positives = 174/261 (67%), Gaps = 16/261 (6%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHS--EPDDEPTR 58 MCGR+AVTTDPA LA +I A+DE G YNVAPT T+ VV+RHS +PDD TR Sbjct 1 MCGRYAVTTDPALLAAEIDAVDETEGTELDVPGYNVAPTTTVVAVVARHSREQPDDAATR 60 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 R+R MRWGL+PSW K GPPL NARA+ VA PAFR+A+++KRCL+PMDGWY Sbjct 61 RLRAMRWGLLPSWQKT-------LSGPPLFNARAESVAEKPAFRAALKTKRCLIPMDGWY 113 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWK---SYRSAPPLLSCTVITTDA 175 EW+V D R K P +L DG ++ AG WSVW+ + PP LS TV+TTDA Sbjct 114 EWQVLDDPEQVRKPRKQPMYLTPVDGTRMYIAGRWSVWRPAGAGLDVPPTLSATVLTTDA 173 Query 176 VGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPP-DVRD-IALRQVSTLVNNVRN 233 VG L +HDRMPL+L E +D+WL+PD P DP+LL P DV + I +R VS LVN V+N Sbjct 174 VGPLRAVHDRMPLVLTPERFDEWLSPDGPADPDLLLPPGLDVAERIEIRPVSALVNTVKN 233 Query 234 NGPELLEPAR--SQPEQIQLL 252 +GPEL+ A S+P Q+ LL Sbjct 234 DGPELIRRAEPGSEPGQLSLL 254 >gi|226305670|ref|YP_002765630.1| hypothetical protein RER_21830 [Rhodococcus erythropolis PR4] gi|226184787|dbj|BAH32891.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=250 Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 128/258 (50%), Positives = 171/258 (67%), Gaps = 14/258 (5%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRH--SEPDDEPTR 58 MCGR+A T DPA LA ++ A+DE + YNVAPT + TVV RH PD +P++ Sbjct 1 MCGRYATTADPATLAVELDALDETDHSAPVEADYNVAPTTEVLTVVERHDRENPDSDPSK 60 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 R+R MRWGL+PSW K KGP L NARAD +A PAFR+A + KRCLVPMDGWY Sbjct 61 RIRRMRWGLVPSWTKEL------GKGPVLFNARADSLAEKPAFRTAFKFKRCLVPMDGWY 114 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYR--SAPPLLSCTVITTDAV 176 EW+ +AT G+ AK P+++H DG+ LF AG+WS W+ R +A P+LSC+++T D++ Sbjct 115 EWQT--EATGGKKAAKIPYYMHPDDGSRLFMAGVWSAWRDPRVENASPVLSCSIVTVDSL 172 Query 177 GELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRD-IALRQVSTLVNNVRNNG 235 G L ++HDRMPL L + W+ WL+PD D LL PD+ + I + +V LVN+V+NNG Sbjct 173 GHLEQVHDRMPLALPRDRWEAWLDPDNTVDSALLEPVPDLFERIDVDRVRPLVNSVKNNG 232 Query 236 PELLEPARSQP-EQIQLL 252 EL+EP + EQI LL Sbjct 233 HELIEPDVDRAGEQISLL 250 >gi|229489594|ref|ZP_04383457.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229323691|gb|EEN89449.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=296 Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 128/258 (50%), Positives = 170/258 (66%), Gaps = 14/258 (5%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRH--SEPDDEPTR 58 MCGR+A T DPA LA ++ A+DE + YNVAPT + TVV RH PD +PT+ Sbjct 47 MCGRYATTADPATLAVELDALDETDHSAPVEADYNVAPTTEVLTVVERHDRENPDSDPTK 106 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 R+R MRWGL+PSW K KGP L NARAD +A PAFR+A + KRCLVPMDGWY Sbjct 107 RIRRMRWGLVPSWTKEL------GKGPVLFNARADSLAEKPAFRTAFKFKRCLVPMDGWY 160 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYR--SAPPLLSCTVITTDAV 176 EW+ +AT G+ AK P+++H DG+ LF AG+WS W+ R +A P+LSC+++T D++ Sbjct 161 EWQT--EATGGKKAAKIPYYMHPDDGSRLFMAGVWSAWRDPRVENASPVLSCSIVTVDSL 218 Query 177 GELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRD-IALRQVSTLVNNVRNNG 235 G L ++HDRMPL L + W+ WL+PD D LL D+ + I + +V LVN+V+NNG Sbjct 219 GHLEQVHDRMPLALPRDRWEAWLDPDNTVDSALLEPVTDLFERIDVDRVRPLVNSVKNNG 278 Query 236 PELLEPARSQP-EQIQLL 252 EL+EP + EQI LL Sbjct 279 HELIEPDVDRAGEQISLL 296 >gi|343927616|ref|ZP_08767084.1| hypothetical protein GOALK_097_00360 [Gordonia alkanivorans NBRC 16433] gi|343762257|dbj|GAA14010.1| hypothetical protein GOALK_097_00360 [Gordonia alkanivorans NBRC 16433] Length=261 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 131/264 (50%), Positives = 167/264 (64%), Gaps = 30/264 (11%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKT-----------------SYNVAPTDTIA 43 MCGR+AVTTDPA+LA +I A++E +YNVAPT T+ Sbjct 4 MCGRYAVTTDPAKLAAEIDAVNEVPEPAKEPADPDALDLDTPAPRALGPNYNVAPTTTVM 63 Query 44 TVVSRHS--EPDDEPTRRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAF 101 TVV RHS +PDD+P R+R MRWGL+P W K KGP L NARA+ A +F Sbjct 64 TVVKRHSPEDPDDDPLLRIRAMRWGLVPPWSKEV------GKGPLLFNARAETAAEKSSF 117 Query 102 RSAVRSKRCLVPMDGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRS 161 R++V+SKRCLVPMDGWYEW+ P + G+P K PF++ DG LF AGLWSVW S Sbjct 118 RASVKSKRCLVPMDGWYEWKKGPLDSRGKPT-KIPFYMSPRDGTRLFMAGLWSVWHDKHS 176 Query 162 --APPLLSCTVITTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPD--VR 217 APPLLSC+++TTDAVG+L ++HDRMPL++ ++WD WL+PD +L A P + Sbjct 177 DHAPPLLSCSILTTDAVGKLRDVHDRMPLIMPYDNWDAWLDPDHRAPDDLFAPPAESLAE 236 Query 218 DIALRQVSTLVNNVRNNGPELLEP 241 I +R V+ LVN V NNGPELL P Sbjct 237 AIDIRGVAPLVNRVANNGPELLNP 260 >gi|326383288|ref|ZP_08204976.1| hypothetical protein SCNU_10139 [Gordonia neofelifaecis NRRL B-59395] gi|326198038|gb|EGD55224.1| hypothetical protein SCNU_10139 [Gordonia neofelifaecis NRRL B-59395] Length=248 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/254 (52%), Positives = 158/254 (63%), Gaps = 18/254 (7%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSE--PDDEPTR 58 MCGR+AVTTDPA+LA +I A++E G SYNVAPT T+ TVV RH PDD+ R Sbjct 1 MCGRYAVTTDPARLASEIDAVNEVRG-DVVHESYNVAPTATVMTVVQRHEHGSPDDDAAR 59 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 RVR MRWGL+PSW K KGP L NARA+ +A PAFR ++ KRCLVPMDGW+ Sbjct 60 RVRAMRWGLVPSWTKEL------GKGPLLFNARAETLADKPAFRRSLTGKRCLVPMDGWF 113 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPP------LLSCTVIT 172 EW+ P G+P K PF++ DG LF GLW+ W+ + + S +IT Sbjct 114 EWKAGPAGPNGKPT-KIPFYMSPVDGTRLFMGGLWAAWRPAEARAAGDDSQWVSSTAIIT 172 Query 173 TDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPD--VRDIALRQVSTLVNN 230 TDAVG L +H RMPL++ E WD WL+PD DP LA P V I +R+VS LVN Sbjct 173 TDAVGPLESVHHRMPLIMPVEYWDAWLDPDHAVDPSYLAPPAAELVDAIEIREVSDLVNR 232 Query 231 VRNNGPELLEPARS 244 V NNGPELLEP S Sbjct 233 VANNGPELLEPVNS 246 >gi|262203405|ref|YP_003274613.1| hypothetical protein Gbro_3527 [Gordonia bronchialis DSM 43247] gi|262086752|gb|ACY22720.1| protein of unknown function DUF159 [Gordonia bronchialis DSM 43247] Length=255 Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 132/259 (51%), Positives = 159/259 (62%), Gaps = 24/259 (9%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKT---------SYNVAPTDTIATVVSRHSE 51 MCGR+AVTTDPA+LA +I A++E +YNVAPT T+ TVV RH Sbjct 4 MCGRYAVTTDPAKLAAEIDAVNEVEATDDATDLDAPRAPGPNYNVAPTTTVMTVVKRHDH 63 Query 52 ----PDDEPTRRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRS 107 PD E T RVR MRWGL+P W K KGP L NARA+ +FR +V+S Sbjct 64 DGEGPDREATLRVRAMRWGLVPPWAKEV------GKGPLLFNARAESAGEKNSFRGSVKS 117 Query 108 KRCLVPMDGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVW--KSYRSAPPL 165 +RCLVPMDGWYEW+ P G+P K PFF+ DG LF AGLWSVW K A PL Sbjct 118 RRCLVPMDGWYEWKKGPPDAKGKPT-KIPFFMSPADGTRLFMAGLWSVWHPKDDADAAPL 176 Query 166 LSCTVITTDAVGELAEIHDRMPLLLAEEDWDDWLNPD--APPDPELLARPPDVRDIALRQ 223 LSC+++TTDAVG+L E+HDRMPL++ + WD WL+PD AP P I +R+ Sbjct 177 LSCSILTTDAVGDLREVHDRMPLVMPFDSWDTWLDPDHRAPDQLFAPPAPEVAAAIEIRE 236 Query 224 VSTLVNNVRNNGPELLEPA 242 VS LVN V NNGPELL PA Sbjct 237 VSPLVNRVINNGPELLNPA 255 >gi|111023302|ref|YP_706274.1| hypothetical protein RHA1_ro06339 [Rhodococcus jostii RHA1] gi|110822832|gb|ABG98116.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=252 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 121/258 (47%), Positives = 161/258 (63%), Gaps = 20/258 (7%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGR+A T +PA LA + AI+EA G YNVAPT + TVV RH RR+ Sbjct 1 MCGRYATTANPATLAADLDAINEA-GEEESPPDYNVAPTTQVLTVVDRHD------ARRI 53 Query 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 R MRWGL+PSW K KGP L NARAD V PAFR+A + KRCLVPMDGWYEW Sbjct 54 RRMRWGLVPSWTKEL------GKGPVLFNARADSVDNKPAFRNAFKYKRCLVPMDGWYEW 107 Query 121 RVDPD----ATPGRPNAKTPFFLHRHDGALLFTAGLWSVWK--SYRSAPPLLSCTVITTD 174 + + D K P+++ DG+ L+ AGLWSVW + + P+LSC++IT D Sbjct 108 QTEVDAAAAGKKSGKAKKIPYYMSPEDGSHLYMAGLWSVWHDPAVAESHPVLSCSIITVD 167 Query 175 AVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPD-VRDIALRQVSTLVNNVRN 233 + +L +HDRMPL++ + W WL+P+ P +LL PD + DI +R+VSTLVN+V+N Sbjct 168 SAAQLENVHDRMPLVMPRDRWSAWLDPEHPASTDLLEVSPDAIADITVRRVSTLVNSVKN 227 Query 234 NGPELLEPARSQPEQIQL 251 NGPELL+P + ++ Q+ Sbjct 228 NGPELLDPDAAGRDEAQV 245 >gi|134102868|ref|YP_001108529.1| putative bacteriophage protein [Saccharopolyspora erythraea NRRL 2338] gi|291008740|ref|ZP_06566713.1| putative bacteriophage protein [Saccharopolyspora erythraea NRRL 2338] gi|133915491|emb|CAM05604.1| putative bacteriophage protein [Saccharopolyspora erythraea NRRL 2338] Length=252 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 127/262 (49%), Positives = 166/262 (64%), Gaps = 25/262 (9%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRH-----SEPDDE 55 MCGR+A T DPA+LA + A+D ATG YNVAPT ++ +VV+RH E D+ Sbjct 1 MCGRYASTKDPAKLAAEFAAVD-ATGDAAPGADYNVAPTKSVFSVVARHPRDEAGERDES 59 Query 56 PTRR-VRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPM 114 T R +RLMRWGL+PSW K+ + G +INA+++ V + PAFRS ++ +RCLVP Sbjct 60 RTERSIRLMRWGLVPSWAKS------ISVGNRMINAKSETVTSKPAFRSPIKRQRCLVPA 113 Query 115 DGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRS---APPLLSCTVI 171 DGWYEW+ D K P+F+ DG+ L AG+WS W+ + APPL+SC+V+ Sbjct 114 DGWYEWKRDG-------KVKQPYFMTPQDGSSLAMAGIWSTWRDPEAGPDAPPLVSCSVL 166 Query 172 TTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPD--VRDIALRQVSTLVN 229 TTDAVG+L +IH+RMPLLLA W+ WL+PD ELL PP V ++ LR VST VN Sbjct 167 TTDAVGQLTDIHERMPLLLAPTVWERWLDPDNADVGELLGPPPRDLVDELELRPVSTAVN 226 Query 230 NVRNNGPELLEPARSQPEQIQL 251 NVRNNG ELLE P + L Sbjct 227 NVRNNGAELLERVDPDPAPVGL 248 >gi|333921436|ref|YP_004495017.1| hypothetical protein AS9A_3779 [Amycolicicoccus subflavus DQS3-9A1] gi|333483657|gb|AEF42217.1| hypothetical protein AS9A_3779 [Amycolicicoccus subflavus DQS3-9A1] Length=259 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 123/251 (50%), Positives = 159/251 (64%), Gaps = 17/251 (6%) Query 1 MCGRFAVTTDPAQLAEKITAIDE---ATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPT 57 MCGR+A T DPA LA ++ A+DE A G G + YN+APT T+A VV R + D + Sbjct 4 MCGRYATTADPATLAAELDALDETPNAEGGGSPRVGYNIAPTTTVAAVVDRRDDSADADS 63 Query 58 ---RRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPM 114 RR+R MRWGL+P W K KGP L NARA+ A PAFR++++SKRCL+PM Sbjct 64 PLRRRIRAMRWGLVPHWSKE------IKKGPLLFNARAESAADKPAFRTSMKSKRCLIPM 117 Query 115 DGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWK---SYRSAPPLLSCTVI 171 DGWYEW D G+ K P+F+ DG+ ++ AG+WS W+ + APPLLSC V+ Sbjct 118 DGWYEWVQADDPVTGK-LVKVPYFMTPRDGSRIYVAGVWSAWRDPSAQEDAPPLLSCAVL 176 Query 172 TTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDV-RDIALRQVSTLVNN 230 TTDAVG L EIHDRMPL+++ + W WL PD P +LL P D I +R+VST VN Sbjct 177 TTDAVGVLTEIHDRMPLVVSPDRWQAWLAPDRPAAEDLLQPPADFDSTIEVRRVSTKVNQ 236 Query 231 VRNNGPELLEP 241 VRN G +L+ P Sbjct 237 VRNEGSDLIVP 247 >gi|312140658|ref|YP_004007994.1| hypothetical protein REQ_33180 [Rhodococcus equi 103S] gi|311889997|emb|CBH49315.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=251 Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 130/261 (50%), Positives = 172/261 (66%), Gaps = 19/261 (7%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEP--TR 58 MCGR+A T DPA LA ++ A++E G YNVAPT + TVV+RH D++ R Sbjct 1 MCGRYATTADPATLAVELDAVNETGETDSGTADYNVAPTTQVLTVVARHDRGDEDSPVRR 60 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 R+R MRWGL+PS+ PG KG PL NAR++ VAT AF++++R KRCLVPMDGWY Sbjct 61 RIRRMRWGLVPSYATE-PG-----KGAPLFNARSETVATKAAFKTSLRFKRCLVPMDGWY 114 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVW---KSYRSAPPLLSCTVITTDA 175 EW+ +P T K P+++ R DGA LF AGLWSVW K+ R A PLLS T++TT++ Sbjct 115 EWQTEP--TADGKAVKVPYYMSRGDGARLFMAGLWSVWHDPKAPREA-PLLSTTILTTES 171 Query 176 VGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPP--DVRDIALRQVSTLVNNVRN 233 V +LA +HDRMPL+L + WD WL+PD+ P+L+ RP + + +R+VS VN+VRN Sbjct 172 VDQLANVHDRMPLILPRDRWDAWLDPDSLGHPDLI-RPSLEEAAAVEIRRVSPKVNSVRN 230 Query 234 NGPELLEP--ARSQPEQIQLL 252 NGP+LL P EQI LL Sbjct 231 NGPDLLAPDVGDRAGEQISLL 251 >gi|325675712|ref|ZP_08155396.1| hypothetical protein HMPREF0724_13178 [Rhodococcus equi ATCC 33707] gi|325553683|gb|EGD23361.1| hypothetical protein HMPREF0724_13178 [Rhodococcus equi ATCC 33707] Length=264 Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 130/261 (50%), Positives = 171/261 (66%), Gaps = 19/261 (7%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEP--TR 58 MCGR+A T DPA LA ++ A++E G YNVAPT + TVV+RH DD+ R Sbjct 14 MCGRYATTADPATLAVELDAVNETGETDSGTADYNVAPTTQVLTVVARHDRGDDDSPVRR 73 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 R+R MRWGL+PS+ PG KG PL NAR++ VAT AF++++R KRCLVPMDGWY Sbjct 74 RIRRMRWGLVPSYATE-PG-----KGAPLFNARSETVATKAAFKTSLRFKRCLVPMDGWY 127 Query 119 EWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVW---KSYRSAPPLLSCTVITTDA 175 EW+ +P T K P+++ R DG LF AGLWSVW K+ R A PLLS T++TT++ Sbjct 128 EWQTEP--TADGKAVKVPYYMSRGDGERLFMAGLWSVWHDPKAPREA-PLLSTTILTTES 184 Query 176 VGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPP--DVRDIALRQVSTLVNNVRN 233 V +LA +HDRMPL+L + WD WL+PD+ P+L+ RP + + +R+VS VN+VRN Sbjct 185 VDQLANVHDRMPLILPRDRWDAWLDPDSLGHPDLI-RPSLEEAAAVEIRRVSPKVNSVRN 243 Query 234 NGPELLEP--ARSQPEQIQLL 252 NGP+LL P EQI LL Sbjct 244 NGPDLLAPDVGDRAGEQISLL 264 >gi|257057046|ref|YP_003134878.1| hypothetical protein Svir_30760 [Saccharomonospora viridis DSM 43017] gi|256586918|gb|ACU98051.1| uncharacterized conserved protein [Saccharomonospora viridis DSM 43017] Length=268 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 120/258 (47%), Positives = 159/258 (62%), Gaps = 22/258 (8%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEP------DD 54 MCGR+A T D A L + A+D G + YNVAPT I TVV R +D Sbjct 3 MCGRYAATKDTATLMLEFDAVDGTEG-KAPQADYNVAPTKDIVTVVERFPRDADGTVLED 61 Query 55 EP-TRRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVP 113 EP R +R+MRWGL+P W K + G +IN RA+ + P+FR+A+ +RCL+P Sbjct 62 EPAVRSLRVMRWGLVPFWAKDP------SVGNRMINTRAETASEKPSFRNALARRRCLIP 115 Query 114 MDGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRS---APPLLSCTV 170 DGW+EW+ D GR AK P+F+ DG+ L AGLW W+ ++ APPL++C+V Sbjct 116 ADGWFEWKA-VDRGVGRRVAKEPYFITTQDGSSLALAGLWETWRDPKADPEAPPLITCSV 174 Query 171 ITTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPD---VRDIALRQVSTL 227 ITT AVG LA+IH+RMPL L + W DWL+P +LLA PP+ V ++ LR VST+ Sbjct 175 ITTQAVGRLADIHERMPLALPRQRWADWLDPARTDVTDLLA-PPEPGWVDELELRPVSTV 233 Query 228 VNNVRNNGPELLEPARSQ 245 VNNVRNNGPEL+EP R + Sbjct 234 VNNVRNNGPELIEPVRPE 251 >gi|226365809|ref|YP_002783592.1| hypothetical protein ROP_64000 [Rhodococcus opacus B4] gi|226244299|dbj|BAH54647.1| hypothetical protein [Rhodococcus opacus B4] Length=252 Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 122/265 (47%), Positives = 162/265 (62%), Gaps = 26/265 (9%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGR+A T +PA LA + AI+EA G +NVAPT + TVV D RR+ Sbjct 1 MCGRYATTANPATLAADLDAINEA-GEEESPPDFNVAPTTQVLTVV------DRRDARRI 53 Query 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 R MRWGL+PSW K KGP L NARAD V PAFR++ + KRCLVPMDGWYEW Sbjct 54 RRMRWGLVPSWTKVL------GKGPVLFNARADSVDNKPAFRNSFKYKRCLVPMDGWYEW 107 Query 121 RVDPD----ATPGRPNAKTPFFLHRHDGALLFTAGLWSVWK--SYRSAPPLLSCTVITTD 174 + + + K P+++ DG+ L+ AGLWSVW + +PP+LSC++IT D Sbjct 108 QTEAEPPAAGKKAGKAKKIPYYMSPEDGSRLYMAGLWSVWHDPAVEESPPVLSCSIITVD 167 Query 175 AVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPD-VRDIALRQVSTLVNNVRN 233 + +L +HDRMPL++ + W WL+P+ P +LLA P + DI +R+VSTLVN+V+N Sbjct 168 SAAQLENVHDRMPLVMPRDRWAAWLDPEHPASTDLLAVSPGAIADITVRRVSTLVNSVKN 227 Query 234 NGPELLEPARSQ------PEQIQLL 252 NGPELL+P + EQI LL Sbjct 228 NGPELLDPDAAGRDDAQVGEQISLL 252 >gi|300789793|ref|YP_003770084.1| hypothetical protein AMED_7978 [Amycolatopsis mediterranei U32] gi|299799307|gb|ADJ49682.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340531461|gb|AEK46666.1| hypothetical protein RAM_40995 [Amycolatopsis mediterranei S699] Length=252 Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 116/259 (45%), Positives = 152/259 (59%), Gaps = 28/259 (10%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDD------ 54 MCGR+A T DPA+L E+ AID G + +NVAPT + TVV RH +D Sbjct 1 MCGRYAATKDPAKLIEEFDAIDLTEG--HARADHNVAPTKNVVTVVQRHPRDEDGQVLED 58 Query 55 EPTRR-VRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVP 113 EP R +R+M+WGL+P W K + G +IN RA+ A PAFR A+ S+RCLVP Sbjct 59 EPAERSLRMMKWGLVPFWAKDP------SVGSRMINTRAETAAEKPAFRRALVSRRCLVP 112 Query 114 MDGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVW--KSYRSAPPLLSCTVI 171 DGWYEWR G+ K PF++ DG+ + G+W W K A PL++ ++I Sbjct 113 ADGWYEWR-----RTGK--EKEPFYMTEPDGSSIAFGGIWESWRPKDDDKAAPLITFSII 165 Query 172 TTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPD--VRDIALRQVSTLVN 229 TTDA G+L ++H RMPL++ WD WL+PD +LL PD V + LR +S+ VN Sbjct 166 TTDAAGQLTDVHHRMPLIVPRSHWDGWLDPDREDVTDLLVPTPDDIVASLELRPISSKVN 225 Query 230 NVRNNGPELLEPARSQPEQ 248 NVRNNGPELLE R P Q Sbjct 226 NVRNNGPELLE--RVDPAQ 242 >gi|134102867|ref|YP_001108528.1| putative bacteriophage protein [Saccharopolyspora erythraea NRRL 2338] gi|291008741|ref|ZP_06566714.1| putative bacteriophage protein [Saccharopolyspora erythraea NRRL 2338] gi|133915490|emb|CAM05603.1| putative bacteriophage protein [Saccharopolyspora erythraea NRRL 2338] Length=236 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 114/248 (46%), Positives = 144/248 (59%), Gaps = 23/248 (9%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGR+A DPA LA + A+D G G YNV PT T+ VV R E R V Sbjct 1 MCGRYAQRQDPAALAGEFEAVDRTEGSVG--PDYNVTPTKTVPIVVERGGE------RSV 52 Query 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 R +RWGL+P+W K GPP+INARA+ + T PA+ + +RCL+P GWYEW Sbjct 53 RPVRWGLVPTWAKD------TTSGPPMINARAESITTKPAYAESAARRRCLLPATGWYEW 106 Query 121 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA 180 + PG + P+ R DGA + A ++S W S PL++C V+TTDAVGELA Sbjct 107 Q------PGD-KQRQPYLCRRGDGASMALAAVFSAWWP-PSGDPLVTCAVVTTDAVGELA 158 Query 181 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRD-IALRQVSTLVNNVRNNGPELL 239 +IH RMPL+L W DWL+P PELL+ P V D + L VST VN++RNN PELL Sbjct 159 DIHHRMPLVLPRSAWADWLDPQRTEVPELLSPQPGVLDELVLHPVSTEVNSIRNNRPELL 218 Query 240 EPARSQPE 247 E A PE Sbjct 219 ERAEPVPE 226 >gi|256380285|ref|YP_003103945.1| hypothetical protein Amir_6295 [Actinosynnema mirum DSM 43827] gi|255924588|gb|ACU40099.1| protein of unknown function DUF159 [Actinosynnema mirum DSM 43827] Length=253 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 111/252 (45%), Positives = 149/252 (60%), Gaps = 23/252 (9%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRH-----SEP-DD 54 MCGR+A T +PAQ+A + A+D G G YNVAPT T++ VV RH EP D Sbjct 1 MCGRYASTKNPAQVATEFDAVDATDGAVPGP-DYNVAPTKTVSAVVDRHPRDAQGEPVPD 59 Query 55 EPTRRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPM 114 E R VR MRWGL+P W K G A +INAR++ V P++R + +RC+VP Sbjct 60 EVERTVRAMRWGLVPHWAKDLSGAAK------MINARSESVLEKPSYRDSAARRRCIVPA 113 Query 115 DGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVW--KSYRSAPPLLSCTVIT 172 +GWYEW+ PG K P+F+ DG+ L AG+WSVW + P+++ V+T Sbjct 114 EGWYEWQ------PGE-GRKQPYFITPGDGSSLAMAGIWSVWWQQEGDERTPVITLAVLT 166 Query 173 TDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPD-VRDIALRQVSTLVNNV 231 TDA+GE+ ++H RMPL+L + WDDWL+PD LLA D V + LR VST VN++ Sbjct 167 TDAIGEMTQVHHRMPLVLPRDRWDDWLDPDRADPSALLAPDLDLVNALELRPVSTRVNSI 226 Query 232 RNNGPELLEPAR 243 RNN L +P R Sbjct 227 RNNDRALTDPVR 238 >gi|302530003|ref|ZP_07282345.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302438898|gb|EFL10714.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=251 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 111/259 (43%), Positives = 149/259 (58%), Gaps = 28/259 (10%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEP------DD 54 MCGR+A T DPA+L E+ A+D G + +NVAPT + TVV RH +D Sbjct 1 MCGRYAATKDPAKLVEEFAAVDLTEG--RARADHNVAPTKNVVTVVQRHPRDADGLVLED 58 Query 55 EPTRR-VRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVP 113 EP R +R+MRWGL+P W K G+ +IN RA+ PAF+ A+ S+RCLVP Sbjct 59 EPAERSLRIMRWGLVPFWAKDPSAGSR------MINTRAETAKEKPAFKRALASRRCLVP 112 Query 114 MDGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVW--KSYRSAPPLLSCTVI 171 DGW+EWR G+ K PF++ G L G+W W K A PL++ +++ Sbjct 113 ADGWFEWR-----RTGK--EKEPFYMTDPSGKSLAFGGIWESWRPKDDADAEPLITFSIL 165 Query 172 TTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELL--ARPPDVRDIALRQVSTLVN 229 TTDA G+L ++H RMPL++ + W WL+PD EL+ P V + LR VS+LVN Sbjct 166 TTDAAGQLTDVHHRMPLIVPRDHWAGWLDPDRSEVDELMTPTPPAIVESLELRPVSSLVN 225 Query 230 NVRNNGPELLEPARSQPEQ 248 NVRNNGPELL R + EQ Sbjct 226 NVRNNGPELLR--RVETEQ 242 >gi|271969522|ref|YP_003343718.1| hypothetical protein Sros_8327 [Streptosporangium roseum DSM 43021] gi|270512697|gb|ACZ90975.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length=253 Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 101/261 (39%), Positives = 146/261 (56%), Gaps = 18/261 (6%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSR--HSEPDDEPTR 58 MCGR+A D +L E+ + + YNVAPT + V+SR S P R Sbjct 1 MCGRYASARDKQELLEEFQVEVDEAAEEELRPDYNVAPTKPVYAVLSRVPKSSPQGRAIR 60 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWY 118 ++R++RWGL+P+W K + G +INAR + V P+FR A +RCL+P DG++ Sbjct 61 QLRVLRWGLVPAWAKD------PSIGSRMINARVETVTEKPSFRKAFAERRCLLPADGYF 114 Query 119 EWRV-DPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPP------LLSCTVI 171 EW V D D T G+P K P+F+ DG ++ AGL+ W+ R P L++C +I Sbjct 115 EWAVPDEDGTAGKPK-KQPYFIQPADGGIMAMAGLYEFWRD-RGRPDDDPLAWLVTCAII 172 Query 172 TTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNV 231 TT A+ E ++HDRMP+L+ + W +WL+P PD + P + + VST VN+V Sbjct 173 TTSALDEAGQVHDRMPMLIERDRWSEWLDPGV-PDAQGFLVPAGSTGLKVYPVSTAVNSV 231 Query 232 RNNGPELLEPARSQPEQIQLL 252 RNNGPEL+EP R + Q L Sbjct 232 RNNGPELIEPLRDEEGDGQAL 252 >gi|331698911|ref|YP_004335150.1| hypothetical protein Psed_5160 [Pseudonocardia dioxanivorans CB1190] gi|326953600|gb|AEA27297.1| protein of unknown function DUF159 [Pseudonocardia dioxanivorans CB1190] Length=270 Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 121/262 (47%), Positives = 151/262 (58%), Gaps = 31/262 (11%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDD------ 54 MCGR++ T PA LA++ A+D +NVAPT + TVV RH DD Sbjct 1 MCGRYSSTKAPADLADEFRAVDATED--DVAPDFNVAPTKQVTTVVERHPRDDDGEPVRD 58 Query 55 EPTRRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPM 114 E R +R +RWGL+PSW K GGA +INAR++ A PAFR A+ S+RCL+P Sbjct 59 ETQRTLRRVRWGLVPSWSKDASGGAR------MINARSETAADKPAFRRALSSRRCLLPA 112 Query 115 DGWYEW-RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSA------PPLLS 167 DGWYEW R D D K P+F DG+ + AG+W WK +A L++ Sbjct 113 DGWYEWQRRDTDTG----KTKQPYFTSYRDGSSIAMAGIWEYWKPKDAALLEEYPDGLVT 168 Query 168 CTVITTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLAR---PPD---VRDIAL 221 V+TT+AVG LA+IHDRMPL+LA + WD WLNPD E +AR PP V + L Sbjct 169 VAVLTTEAVGPLADIHDRMPLVLAPDAWDAWLNPDTDAKDESVARLLAPPSAALVDRMEL 228 Query 222 RQVSTLVNNVRNNGPELLEPAR 243 R VS VNNVRNNGPELLE R Sbjct 229 RPVSNRVNNVRNNGPELLEALR 250 >gi|325002565|ref|ZP_08123677.1| hypothetical protein PseP1_27552 [Pseudonocardia sp. P1] Length=272 Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 119/276 (44%), Positives = 156/276 (57%), Gaps = 33/276 (11%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDD---EPT 57 MCGR+A T PA LA++ A+D AT + YNVAPT I VV RH DD +PT Sbjct 1 MCGRYASTKAPADLADEFHAVD-ATAETSQRADYNVAPTKDITVVVERHPRDDDGEADPT 59 Query 58 ---RRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPM 114 R +R +RWGL+P W K GA ++NAR++ + PAFR A S+RCL PM Sbjct 60 VTERSLRTVRWGLVPFWSKDPSAGAR------MVNARSETITEKPAFRRAAASRRCLFPM 113 Query 115 DGWYEWRVD-----PDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWK------SYRSAP 163 DGWYEW+ + G+P K P+F H DG+ + AG+W W+ + + Sbjct 114 DGWYEWQRSAAVPKSEGGTGKPQ-KQPYFTHYADGSTMAMAGIWEFWRPKDGELAEKYPD 172 Query 164 PLLSCTVITTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLAR------PPDVR 217 L++ V+TT+AVG LA++HDRMPL+L DW DWL+PD E ++R P V Sbjct 173 GLVTACVLTTEAVGPLAQVHDRMPLVLRPGDWTDWLDPDTGSGDERVSRLLVPPTPELVS 232 Query 218 DIALRQVSTLVNNVRNNGPELLE--PARSQPEQIQL 251 +R VS VNNVRNNGPELL+ P E IQL Sbjct 233 TCEIRPVSAQVNNVRNNGPELLDRIPDDEVREPIQL 268 >gi|296270885|ref|YP_003653517.1| hypothetical protein Tbis_2926 [Thermobispora bispora DSM 43833] gi|296093672|gb|ADG89624.1| protein of unknown function DUF159 [Thermobispora bispora DSM 43833] Length=253 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 107/251 (43%), Positives = 139/251 (56%), Gaps = 19/251 (7%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKT-SYNVAPTDTIATVVSRHSE---PDDEP 56 MCGR+ A+L E+ E G YNVAPT + V+ R + + P Sbjct 1 MCGRYVSARKKAELLEEFQV--ELDGVEDEPAPDYNVAPTKEVYAVLCRIPKTGGAELRP 58 Query 57 TRRVRLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDG 116 R++R +RWGL+PSW K + G +INAR + VA PAFR+A S+RCL+P DG Sbjct 59 VRQLRRVRWGLVPSWAKD------PSIGSRMINARIETVAVKPAFRAAFASRRCLIPADG 112 Query 117 WYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPP-----LLSCTVI 171 +YEW P PG K P+F+H DG +L AGL+ W+ P L +CTVI Sbjct 113 FYEWMPVPGERPGE-TRKQPYFIHPADGGVLAMAGLYEFWRDPNRPPDDPERWLCTCTVI 171 Query 172 TTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNV 231 TT A + IHDRMPLLL + W DWL+P+ PDP L P D + VST VN+V Sbjct 172 TTTAEDRVGRIHDRMPLLLDRDRWADWLDPEF-PDPAALLIPADPGRLRAHPVSTRVNSV 230 Query 232 RNNGPELLEPA 242 RNNGPEL++P Sbjct 231 RNNGPELIKPV 241 >gi|326332857|ref|ZP_08199114.1| product YoaM [Nocardioidaceae bacterium Broad-1] gi|325949215|gb|EGD41298.1| product YoaM [Nocardioidaceae bacterium Broad-1] Length=246 Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 111/250 (45%), Positives = 143/250 (58%), Gaps = 20/250 (8%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSR--HSEPDDEPTR 58 MCGR+A + P +LAE+ IDE SYNVAPTD + V+ R H E + R Sbjct 1 MCGRYASSRQPDELAEEF-EIDELRLQEPLTESYNVAPTDQVYAVLERPPHEE-NTSSER 58 Query 59 RVRLMRWGLIPSWIKAGPGGAPDAK-GPPLINARADKVATSPAFRSAVRSKRCLVPMDGW 117 ++R +RWGL+PSW K D K G +INAR + V PA+R A +RCL+P DG+ Sbjct 59 QLRSVRWGLVPSWAK-------DVKIGNRMINARMETVGEKPAYRRAFAKRRCLLPADGY 111 Query 118 YEWR-VDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVW---KSYRSAPP--LLSCTVI 171 +EW D G+P K P+F+ DG +L AGL+ +W P L SCTVI Sbjct 112 FEWYATDAKDAKGKPR-KQPYFITPKDGGVLAMAGLYELWPDPAKDEDDPTRWLWSCTVI 170 Query 172 TTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNV 231 TT+A L IHDRMPL++ E WD WL+P P D +LL P + VSTLV+NV Sbjct 171 TTEAEDSLGRIHDRMPLMVERERWDQWLDPTRPGDVDLLT-PAAPGRLEAYPVSTLVSNV 229 Query 232 RNNGPELLEP 241 RNNG EL+EP Sbjct 230 RNNGRELIEP 239 >gi|315503815|ref|YP_004082702.1| hypothetical protein ML5_3034 [Micromonospora sp. L5] gi|315410434|gb|ADU08551.1| protein of unknown function DUF159 [Micromonospora sp. L5] Length=235 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 110/242 (46%), Positives = 142/242 (59%), Gaps = 27/242 (11%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGR+A T A L+ + DE GG YNVAPTD + V E R + Sbjct 1 MCGRYATTRSAADLSALFESADE---TGGVAPDYNVAPTDPVPLV-----RLAPEGHRLL 52 Query 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 L RWGL+P W ++ G A +INARA+ VATS A+ + +RCLVP DGWYEW Sbjct 53 SLGRWGLLPQWSRSAAGAAR------MINARAETVATSRAYAPSFARRRCLVPADGWYEW 106 Query 121 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA 180 D + P+F+ DG++L AG+WSVW+S +A L+ +V+TT AVGELA Sbjct 107 VRLAD------GGRQPYFMTPRDGSVLAFAGIWSVWESAGAA--RLTFSVLTTAAVGELA 158 Query 181 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIA---LRQVSTLVNNVRNNGPE 237 E+HDRMPLLL+ E W +WL P P ELLA PPD +A +R VS V +VRN+GPE Sbjct 159 EVHDRMPLLLSPERWAEWLGPAEEP-AELLA-PPDAGLLAGLEIRPVSRAVGDVRNDGPE 216 Query 238 LL 239 L+ Sbjct 217 LI 218 >gi|302869703|ref|YP_003838340.1| hypothetical protein Micau_5258 [Micromonospora aurantiaca ATCC 27029] gi|302572562|gb|ADL48764.1| protein of unknown function DUF159 [Micromonospora aurantiaca ATCC 27029] Length=235 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 110/242 (46%), Positives = 142/242 (59%), Gaps = 27/242 (11%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGR+A T A L+ + DE GG YNVAPTD + V E R + Sbjct 1 MCGRYATTRSAADLSALFESADE---TGGVAPDYNVAPTDPVPLV-----RLAPEGHRLL 52 Query 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 L RWGL+P W ++ G A +INARA+ VATS A+ + +RCLVP DGWYEW Sbjct 53 SLGRWGLLPQWSRSAAGAAR------MINARAETVATSRAYAPSFARRRCLVPSDGWYEW 106 Query 121 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA 180 D + P+F+ DG++L AG+WSVW+S +A L+ +V+TT AVGELA Sbjct 107 VRLAD------GGRQPYFMTPRDGSVLAFAGIWSVWESAGAA--RLTFSVLTTAAVGELA 158 Query 181 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIA---LRQVSTLVNNVRNNGPE 237 E+HDRMPLLL+ E W +WL P P ELLA PPD +A +R VS V +VRN+GPE Sbjct 159 EVHDRMPLLLSPERWAEWLGPAEEP-AELLA-PPDAGLLAGLEIRPVSRAVGDVRNDGPE 216 Query 238 LL 239 L+ Sbjct 217 LI 218 >gi|117927744|ref|YP_872295.1| hypothetical protein Acel_0536 [Acidothermus cellulolyticus 11B] gi|117648207|gb|ABK52309.1| protein of unknown function DUF159 [Acidothermus cellulolyticus 11B] Length=250 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 106/246 (44%), Positives = 140/246 (57%), Gaps = 15/246 (6%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGR+A T DPA LA +DE YN+APT+ + V+ R E ++ R + Sbjct 1 MCGRYAATRDPADLAAAFQ-VDEVVAERALPPRYNIAPTNPVYAVLERR-ENGEQLRREL 58 Query 61 RLMRWGLIPSWIKAGPGGAPDAK-GPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYE 119 R++RWGL+PSW + D + G LINARA+ +A PAFR A +RCL+P DG+YE Sbjct 59 RVLRWGLVPSWAR-------DPRIGNRLINARAETIAEKPAFRRAFAVRRCLLPADGYYE 111 Query 120 WRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWK--SYRSAPPLLSCTVITTDAVG 177 W GR K PFF+ DG +L AGL+ +W+ + L +C VITT A Sbjct 112 W-FPLAGDGGRRPRKQPFFIRPRDGGILPMAGLYELWRDPTDPDGEWLWTCVVITTRATD 170 Query 178 ELAEIHDRMPLLLAEEDWDDWLNP--DAPPDPELLARPPDVRDIALRQVSTLVNNVRNNG 235 EL +HDRMP +A +DWD WL+P D D L RP + VSTLVN+VRN+G Sbjct 171 ELGRLHDRMPTFVAPDDWDRWLDPRLDTLQDIAALLRPAAPGWLEAYPVSTLVNDVRNDG 230 Query 236 PELLEP 241 P L+EP Sbjct 231 PALVEP 236 >gi|336118739|ref|YP_004573511.1| hypothetical protein MLP_30940 [Microlunatus phosphovorus NM-1] gi|334686523|dbj|BAK36108.1| hypothetical protein MLP_30940 [Microlunatus phosphovorus NM-1] Length=273 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 108/260 (42%), Positives = 144/260 (56%), Gaps = 28/260 (10%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGR+A T+ P L ++ I+E G G YNVAPT + V+ R S+ DD TRR+ Sbjct 1 MCGRYASTSRPETLVDEFD-IEEILGDLPGP-DYNVAPTVAVPAVLERRSKVDDHITRRL 58 Query 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 + WGL+PSW K GGA LINAR + VA P+FR A S+RCL+P DG+YEW Sbjct 59 SPLVWGLVPSWAKDAKGGA------RLINARVETVAEKPSFRRAFASRRCLLPADGFYEW 112 Query 121 RVDPDATP---GRPNAKT---------PFFLHRHDGALLFTAGLWSVWKS-----YRSAP 163 P+AT G P +T PFF+HR DG+LL AG++ +W+ + Sbjct 113 -YSPEATDQLLGSPAGRTGRAGRGKKQPFFIHRADGSLLVMAGIYEIWRDPSKDRADDSA 171 Query 164 PLLSCTVITTDAVGELAEIHDRMPLLLAEEDWDDWLNP--DAPPDPELLARPPDVRDIAL 221 L +C+VITT A + IHDRMP+++ WD WL+P AP L + + + Sbjct 172 WLRTCSVITTVATDAVGHIHDRMPMVVPRASWDAWLDPRLTAPEAALELLQVTEPAALEA 231 Query 222 RQVSTLVNNVRNNGPELLEP 241 VST VN+V NN P LL P Sbjct 232 YAVSTSVNSVSNNDPSLLLP 251 >gi|330469948|ref|YP_004407691.1| hypothetical protein VAB18032_00035 [Verrucosispora maris AB-18-032] gi|328812919|gb|AEB47091.1| hypothetical protein VAB18032_00035 [Verrucosispora maris AB-18-032] Length=236 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 106/248 (43%), Positives = 139/248 (57%), Gaps = 24/248 (9%) Query 1 MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV 60 MCGR+A T +L+ A DE G YNVAPTD + V D + R + Sbjct 1 MCGRYATTRSSGELSGLFEATDETEGAL--VVDYNVAPTDPVPLV-----RLDAQGHRAL 53 Query 61 RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW 120 L RWGL+P+W ++ A +INARA+ VATS A+ A +RCLVP DGWYEW Sbjct 54 SLGRWGLLPAWSRS------PANAARMINARAETVATSRAYAPAFARRRCLVPADGWYEW 107 Query 121 RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA 180 PD + K P+++ D +L AG+WSVW+ + PLL+ +V+TT A+GELA Sbjct 108 VRRPDGS------KQPYYMTSTDDPVLAFAGIWSVWEG--PSGPLLTLSVVTTAALGELA 159 Query 181 EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPD--VRDIALRQVSTLVNNVRNNGPEL 238 E+HDRMPLLL + W WL P P LLA PP + + +R V V NVRN+GPEL Sbjct 160 EVHDRMPLLLPRQRWATWLGPSDDPA-SLLAPPPLEWLAGVEIRPVGPGVGNVRNDGPEL 218 Query 239 LEPARSQP 246 + S P Sbjct 219 IARVPSMP 226 Lambda K H 0.317 0.135 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 365242488240 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40