BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3228 Length=330 Score E Sequences producing significant alignments: (Bits) Value gi|15610364|ref|NP_217745.1| hypothetical protein Rv3228 [Mycoba... 639 0.0 gi|340628208|ref|YP_004746660.1| hypothetical protein MCAN_32471... 637 0.0 gi|121639118|ref|YP_979342.1| hypothetical protein BCG_3258 [Myc... 636 1e-180 gi|183981341|ref|YP_001849632.1| hypothetical protein MMAR_1319 ... 542 3e-152 gi|15827343|ref|NP_301606.1| hypothetical protein ML0791 [Mycoba... 539 2e-151 gi|118618042|ref|YP_906374.1| hypothetical protein MUL_2561 [Myc... 535 4e-150 gi|118466672|ref|YP_883329.1| GTPase EngC [Mycobacterium avium 1... 530 1e-148 gi|336459570|gb|EGO38506.1| ribosome small subunit-dependent GTP... 528 7e-148 gi|41409433|ref|NP_962269.1| hypothetical protein MAP3335 [Mycob... 525 6e-147 gi|342861195|ref|ZP_08717844.1| GTPase EngC [Mycobacterium colom... 520 1e-145 gi|296168993|ref|ZP_06850659.1| GTPase EngC [Mycobacterium paras... 514 9e-144 gi|254819153|ref|ZP_05224154.1| GTPase EngC [Mycobacterium intra... 511 7e-143 gi|240170374|ref|ZP_04749033.1| hypothetical protein MkanA1_1376... 510 1e-142 gi|333991604|ref|YP_004524218.1| hypothetical protein JDM601_296... 491 5e-137 gi|145225274|ref|YP_001135952.1| GTPase EngC [Mycobacterium gilv... 489 2e-136 gi|120402769|ref|YP_952598.1| GTPase EngC [Mycobacterium vanbaal... 477 1e-132 gi|169630628|ref|YP_001704277.1| hypothetical protein MAB_3547 [... 469 2e-130 gi|118469007|ref|YP_886255.1| ribosome small subunit-dependent G... 462 3e-128 gi|126433997|ref|YP_001069688.1| GTPase EngC [Mycobacterium sp. ... 461 8e-128 gi|108798332|ref|YP_638529.1| GTPase EngC [Mycobacterium sp. MCS... 461 1e-127 gi|325675710|ref|ZP_08155394.1| GTPase [Rhodococcus equi ATCC 33... 454 1e-125 gi|312140660|ref|YP_004007996.1| gtpase [Rhodococcus equi 103S] ... 451 9e-125 gi|226365807|ref|YP_002783590.1| GTPase [Rhodococcus opacus B4] ... 446 2e-123 gi|262203464|ref|YP_003274672.1| GTPase EngC [Gordonia bronchial... 442 4e-122 gi|296138824|ref|YP_003646067.1| GTPase EngC [Tsukamurella pauro... 434 1e-119 gi|54026563|ref|YP_120805.1| hypothetical protein nfa45900 [Noca... 427 1e-117 gi|343927658|ref|ZP_08767126.1| putative GTPase [Gordonia alkani... 421 6e-116 gi|226305668|ref|YP_002765628.1| GTPase [Rhodococcus erythropoli... 421 7e-116 gi|227541904|ref|ZP_03971953.1| possible GTP-binding protein [Co... 413 2e-113 gi|227486936|ref|ZP_03917252.1| possible GTP-binding protein [Co... 412 3e-113 gi|255323812|ref|ZP_05364938.1| GTPase EngC [Corynebacterium tub... 406 3e-111 gi|326383276|ref|ZP_08204964.1| GTPase EngC [Gordonia neofelifae... 404 9e-111 gi|111023300|ref|YP_706272.1| GTPase [Rhodococcus jostii RHA1] >... 404 9e-111 gi|334563875|ref|ZP_08516866.1| hypothetical protein CbovD2_0481... 403 2e-110 gi|311739812|ref|ZP_07713646.1| possible GTP-binding protein [Co... 402 4e-110 gi|296118813|ref|ZP_06837389.1| putative ribosome small subunit-... 401 7e-110 gi|25027334|ref|NP_737388.1| hypothetical protein CE0778 [Coryne... 401 7e-110 gi|227505522|ref|ZP_03935571.1| possible GTP-binding protein [Co... 399 5e-109 gi|227502898|ref|ZP_03932947.1| possible GTP-binding protein [Co... 398 6e-109 gi|227832513|ref|YP_002834220.1| hypothetical protein cauri_0685... 396 2e-108 gi|62389651|ref|YP_225053.1| hypothetical protein cg0872 [Coryne... 396 2e-108 gi|305679919|ref|ZP_07402729.1| putative ribosome small subunit-... 389 3e-106 gi|172040169|ref|YP_001799883.1| hypothetical protein cur_0489 [... 388 5e-106 gi|340795121|ref|YP_004760584.1| hypothetical protein CVAR_2161 ... 386 2e-105 gi|68536713|ref|YP_251418.1| hypothetical protein jk1626 [Coryne... 385 5e-105 gi|257057047|ref|YP_003134879.1| ribosome small subunit-dependen... 384 1e-104 gi|300779604|ref|ZP_07089460.1| GTPase EngC [Corynebacterium gen... 382 6e-104 gi|237786060|ref|YP_002906765.1| hypothetical protein ckrop_1493... 382 6e-104 gi|38233312|ref|NP_939079.1| hypothetical protein DIP0705 [Coryn... 381 1e-103 gi|213965020|ref|ZP_03393219.1| GTPase EngC [Corynebacterium amy... 380 1e-103 >gi|15610364|ref|NP_217745.1| hypothetical protein Rv3228 [Mycobacterium tuberculosis H37Rv] gi|15842817|ref|NP_337854.1| hypothetical protein MT3325 [Mycobacterium tuberculosis CDC1551] gi|31794409|ref|NP_856902.1| hypothetical protein Mb3257 [Mycobacterium bovis AF2122/97] 78 more sequence titles Length=330 Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/330 (99%), Positives = 330/330 (100%), Gaps = 0/330 (0%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 +RPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM Sbjct 1 MRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT Sbjct 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR Sbjct 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA Sbjct 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 Query 301 DPECALDTLSGPAARRAAAARRLLAVLSQT 330 DPECALDTLSGPAARRAAAARRLLAVLSQT Sbjct 301 DPECALDTLSGPAARRAAAARRLLAVLSQT 330 >gi|340628208|ref|YP_004746660.1| hypothetical protein MCAN_32471 [Mycobacterium canettii CIPT 140010059] gi|340006398|emb|CCC45578.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=330 Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/330 (99%), Positives = 329/330 (99%), Gaps = 0/330 (0%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 +RPGDYDESDVKVRSGR SRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM Sbjct 1 MRPGDYDESDVKVRSGRGSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT Sbjct 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR Sbjct 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA Sbjct 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 Query 301 DPECALDTLSGPAARRAAAARRLLAVLSQT 330 DPECALDTLSGPAARRAAAARRLLAVLSQT Sbjct 301 DPECALDTLSGPAARRAAAARRLLAVLSQT 330 >gi|121639118|ref|YP_979342.1| hypothetical protein BCG_3258 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121494766|emb|CAL73247.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=330 Score = 636 bits (1641), Expect = 1e-180, Method: Compositional matrix adjust. Identities = 328/330 (99%), Positives = 329/330 (99%), Gaps = 0/330 (0%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 +RPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM Sbjct 1 MRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPF KQFADLELTVT Sbjct 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFDKQFADLELTVT 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR Sbjct 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA Sbjct 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 Query 301 DPECALDTLSGPAARRAAAARRLLAVLSQT 330 DPECALDTLSGPAARRAAAARRLLAVLSQT Sbjct 301 DPECALDTLSGPAARRAAAARRLLAVLSQT 330 >gi|183981341|ref|YP_001849632.1| hypothetical protein MMAR_1319 [Mycobacterium marinum M] gi|183174667|gb|ACC39777.1| conserved hypothetical protein [Mycobacterium marinum M] Length=330 Score = 542 bits (1397), Expect = 3e-152, Method: Compositional matrix adjust. Identities = 286/330 (87%), Positives = 302/330 (92%), Gaps = 0/330 (0%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 +RPGDYDESDVK+RSGR SRPRTKTRPEHADAEAAMVV+VDRGRWGCVLGG P RR+TAM Sbjct 1 MRPGDYDESDVKIRSGRGSRPRTKTRPEHADAEAAMVVAVDRGRWGCVLGGDPLRRVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVD+VGDLSGRPDTLARIVRR PRRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVDLVGDLSGRPDTLARIVRRGPRRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLL+VVALADPPPR+GLVDRALIAAY GGLTPILCLTKTDLAP EPF +QF +L+L V Sbjct 121 DQLLMVVALADPPPRSGLVDRALIAAYTGGLTPILCLTKTDLAPPEPFAEQFLELDLQVV 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AAG DDPLLAVADLL GK TVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTST+ Sbjct 181 AAGRDDPLLAVADLLDGKTTVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPL G GWVIDTPGIRSFGLAHIQPD+VLLAF+DLAEA +CPRGCGHMGPPA Sbjct 241 SVALPLETDGQGGGWVIDTPGIRSFGLAHIQPDDVLLAFTDLAEAIGDCPRGCGHMGPPA 300 Query 301 DPECALDTLSGPAARRAAAARRLLAVLSQT 330 DPEC LD+LSG A RR AAARRLL L +T Sbjct 301 DPECVLDSLSGTAVRRVAAARRLLTALRET 330 >gi|15827343|ref|NP_301606.1| hypothetical protein ML0791 [Mycobacterium leprae TN] gi|221229821|ref|YP_002503237.1| hypothetical protein MLBr_00791 [Mycobacterium leprae Br4923] gi|13092892|emb|CAC30300.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932928|emb|CAR70885.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=327 Score = 539 bits (1389), Expect = 2e-151, Method: Compositional matrix adjust. Identities = 277/325 (86%), Positives = 294/325 (91%), Gaps = 4/325 (1%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 YDESDVK+RSGR SRPRTKTRPEHADA+AAMVVSVDRGRWGC L PDRRITAMRAREL Sbjct 7 YDESDVKIRSGRGSRPRTKTRPEHADAKAAMVVSVDRGRWGCALDNCPDRRITAMRAREL 66 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 G TPIVVGD+V+VVGDLSGRPDTLARIVRR RRTVLRRTADDTD +ERVVVANADQLLI Sbjct 67 GHTPIVVGDNVEVVGDLSGRPDTLARIVRRLQRRTVLRRTADDTDTSERVVVANADQLLI 126 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 VVALADPPPRTGLVDRALIAAYAGGL PILCLTKTDLAP EPF KQF DL+LTV AGV Sbjct 127 VVALADPPPRTGLVDRALIAAYAGGLAPILCLTKTDLAPLEPFAKQFVDLDLTVVTAGVG 186 Query 186 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALP 245 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEA+R+VGEVT+ GRGRHTST+SVALP Sbjct 187 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEANRSVGEVTDTGRGRHTSTQSVALP 246 Query 246 LGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECA 305 L GSGWVIDTPGIRSFGLAHI+PD+V+LAFSDL EAT +CPRGC H+GPPADPEC Sbjct 247 ----LEGSGWVIDTPGIRSFGLAHIRPDDVVLAFSDLTEATEDCPRGCRHIGPPADPECT 302 Query 306 LDTLSGPAARRAAAARRLLAVLSQT 330 LD +SGPA RR AA RRLLAVL +T Sbjct 303 LDNISGPAVRRVAATRRLLAVLRET 327 >gi|118618042|ref|YP_906374.1| hypothetical protein MUL_2561 [Mycobacterium ulcerans Agy99] gi|118570152|gb|ABL04903.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=330 Score = 535 bits (1378), Expect = 4e-150, Method: Compositional matrix adjust. Identities = 272/311 (88%), Positives = 287/311 (93%), Gaps = 0/311 (0%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 +RPGDYDESDVK+RSGR SRPRTKTRPEHADAEAAMVV+VDRGRWGCVLGG P RR+TAM Sbjct 1 MRPGDYDESDVKIRSGRGSRPRTKTRPEHADAEAAMVVAVDRGRWGCVLGGDPLRRVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 R RELGRTPIVVGDDVD+VGDLSGRPDTLARIVRR PRRTVLRRTADDTDPTERVVVANA Sbjct 61 RTRELGRTPIVVGDDVDLVGDLSGRPDTLARIVRRGPRRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLL+VVALADPPPR+GLVDRALIAAY GGLTPILCLTKTDLAP EPF +QF +L+L V Sbjct 121 DQLLMVVALADPPPRSGLVDRALIAAYTGGLTPILCLTKTDLAPPEPFAEQFLELDLQVV 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AAG DDPLLAVADLL GK TVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTST+ Sbjct 181 AAGRDDPLLAVADLLDGKTTVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPL G GWVIDTPGIRS GLAHIQPD+VLLAF+DLAEA +CPRGCGHMGPPA Sbjct 241 SVALPLETDGQGGGWVIDTPGIRSLGLAHIQPDDVLLAFTDLAEAIGDCPRGCGHMGPPA 300 Query 301 DPECALDTLSG 311 DPEC LD+LSG Sbjct 301 DPECVLDSLSG 311 >gi|118466672|ref|YP_883329.1| GTPase EngC [Mycobacterium avium 104] gi|254776621|ref|ZP_05218137.1| GTPase EngC [Mycobacterium avium subsp. avium ATCC 25291] gi|118167959|gb|ABK68856.1| GTPase EngC [Mycobacterium avium 104] Length=331 Score = 530 bits (1365), Expect = 1e-148, Method: Compositional matrix adjust. Identities = 293/330 (89%), Positives = 309/330 (94%), Gaps = 0/330 (0%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 +RPGDYDESDVK+RSGR SRPRTKTRPEHADA AAMVVSVDRGRWGCVLGG PDRR+TAM Sbjct 1 MRPGDYDESDVKIRSGRGSRPRTKTRPEHADARAAMVVSVDRGRWGCVLGGDPDRRVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRR RRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRGERRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLVDRALIAAYAGGL PILCLTKTDLAP EPF +QFADL+LTV Sbjct 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLVPILCLTKTDLAPPEPFAQQFADLDLTVV 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AAG DDPL AVADLLAGKITVLLGHSGVGKSTLVNRLVP+ADRAVG VTEIG+GRHTST+ Sbjct 181 AAGRDDPLPAVADLLAGKITVLLGHSGVGKSTLVNRLVPDADRAVGAVTEIGKGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPL + L +GWVIDTPGIRSFGLAHIQPD+V++AFSDLAEA +CPRGCGHMGPPA Sbjct 241 SVALPLTERLGTTGWVIDTPGIRSFGLAHIQPDDVVMAFSDLAEAIADCPRGCGHMGPPA 300 Query 301 DPECALDTLSGPAARRAAAARRLLAVLSQT 330 DPECALDTL+GPAARR AAARRLL L+QT Sbjct 301 DPECALDTLTGPAARRVAAARRLLDALNQT 330 >gi|336459570|gb|EGO38506.1| ribosome small subunit-dependent GTPase A [Mycobacterium avium subsp. paratuberculosis S397] Length=331 Score = 528 bits (1359), Expect = 7e-148, Method: Compositional matrix adjust. Identities = 291/330 (89%), Positives = 308/330 (94%), Gaps = 0/330 (0%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 +RPGDYDESDVK+RSGR SRPRTKTRPEHADA AAMVVSVDRGRWGCVLGG PDRR+TAM Sbjct 1 MRPGDYDESDVKIRSGRGSRPRTKTRPEHADARAAMVVSVDRGRWGCVLGGDPDRRVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRR RRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRGERRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLVDRALIAAYAGGL PILCLTKTDLAP EPF +QFADL+LTV Sbjct 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLVPILCLTKTDLAPPEPFAQQFADLDLTVV 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AAG DDPL AVADLLAGK+TVLLGHSGVGKSTLVNRLVP+ADRAVG VTEIG+GRHTST+ Sbjct 181 AAGRDDPLPAVADLLAGKVTVLLGHSGVGKSTLVNRLVPDADRAVGAVTEIGKGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPL + L +GWVIDTPGIRSFGLAHIQPD+V++AFSDLAEA +CPRGCGHMGPPA Sbjct 241 SVALPLTERLGTTGWVIDTPGIRSFGLAHIQPDDVVMAFSDLAEAIADCPRGCGHMGPPA 300 Query 301 DPECALDTLSGPAARRAAAARRLLAVLSQT 330 DPECALDTL+GPAARR AAARRLL L+Q Sbjct 301 DPECALDTLTGPAARRVAAARRLLDALNQN 330 >gi|41409433|ref|NP_962269.1| hypothetical protein MAP3335 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398264|gb|AAS05885.1| hypothetical protein MAP_3335 [Mycobacterium avium subsp. paratuberculosis K-10] Length=331 Score = 525 bits (1351), Expect = 6e-147, Method: Compositional matrix adjust. Identities = 290/330 (88%), Positives = 307/330 (94%), Gaps = 0/330 (0%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 +RPGDYDESDVK+RSGR SRPRTKTRPEHADA AAMVVSVDRGRWGCVLGG PDRR+TAM Sbjct 1 MRPGDYDESDVKIRSGRGSRPRTKTRPEHADARAAMVVSVDRGRWGCVLGGDPDRRVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRR RRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRGERRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLVDRALIAAYAGGL PILCLTKTDLAP EPF +QFADL+LTV Sbjct 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLVPILCLTKTDLAPPEPFAQQFADLDLTVV 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AAG DDPL AVADLLAGK+TVLLGHSGVGKSTLVNRLVP+ADRAVG VTEIG+G HTST+ Sbjct 181 AAGRDDPLPAVADLLAGKVTVLLGHSGVGKSTLVNRLVPDADRAVGAVTEIGKGPHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPL + L +GWVIDTPGIRSFGLAHIQPD+V++AFSDLAEA +CPRGCGHMGPPA Sbjct 241 SVALPLTERLGTTGWVIDTPGIRSFGLAHIQPDDVVMAFSDLAEAIADCPRGCGHMGPPA 300 Query 301 DPECALDTLSGPAARRAAAARRLLAVLSQT 330 DPECALDTL+GPAARR AAARRLL L+Q Sbjct 301 DPECALDTLTGPAARRVAAARRLLDALNQN 330 >gi|342861195|ref|ZP_08717844.1| GTPase EngC [Mycobacterium colombiense CECT 3035] gi|342131639|gb|EGT84909.1| GTPase EngC [Mycobacterium colombiense CECT 3035] Length=331 Score = 520 bits (1339), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 276/312 (89%), Positives = 293/312 (94%), Gaps = 0/312 (0%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 +RPGDYDESDVK+RSGR SRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGG DRR+TAM Sbjct 1 MRPGDYDESDVKIRSGRGSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGDVDRRVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRR RRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRGERRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLVDR LIAAYAGGLTPILCLTKTDLAP EPF +QF DL+LTV Sbjct 121 DQLLIVVALADPPPRTGLVDRTLIAAYAGGLTPILCLTKTDLAPPEPFAEQFVDLDLTVV 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AG DDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVP+ADRAVG+VT+IGRGRHTST+ Sbjct 181 TAGRDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPDADRAVGDVTDIGRGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPL L +GWVIDTPGIRSFGLAHI+PD+V++AFSDLA+A +CPRGCGHMGPPA Sbjct 241 SVALPLTQPLGTTGWVIDTPGIRSFGLAHIRPDDVMMAFSDLADAIADCPRGCGHMGPPA 300 Query 301 DPECALDTLSGP 312 DPECALDTL+GP Sbjct 301 DPECALDTLTGP 312 >gi|296168993|ref|ZP_06850659.1| GTPase EngC [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896335|gb|EFG75991.1| GTPase EngC [Mycobacterium parascrofulaceum ATCC BAA-614] Length=326 Score = 514 bits (1323), Expect = 9e-144, Method: Compositional matrix adjust. Identities = 278/312 (90%), Positives = 289/312 (93%), Gaps = 4/312 (1%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 +RPGDYDESDVKVRSGR SRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGG P RR+TAM Sbjct 1 MRPGDYDESDVKVRSGRGSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGDPTRRVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVDVVGDLSGR DTLARIVRR RRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVDVVGDLSGRTDTLARIVRRGERRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLVDRALIAA+AGGLTPILCLTKTDLAP EPF F DL+LTV Sbjct 121 DQLLIVVALADPPPRTGLVDRALIAAFAGGLTPILCLTKTDLAPPEPFAAHFVDLDLTVV 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AAG DDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEA+RAVGEVT+IGRGRHTST+ Sbjct 181 AAGRDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEAERAVGEVTDIGRGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALP L+ SGWVIDTPGIRSFGLAHI+PD+VL+AFSDLA A CPRGCGHMGPPA Sbjct 241 SVALP----LATSGWVIDTPGIRSFGLAHIEPDDVLMAFSDLAGAIEHCPRGCGHMGPPA 296 Query 301 DPECALDTLSGP 312 DPECALD LSGP Sbjct 297 DPECALDALSGP 308 >gi|254819153|ref|ZP_05224154.1| GTPase EngC [Mycobacterium intracellulare ATCC 13950] Length=327 Score = 511 bits (1316), Expect = 7e-143, Method: Compositional matrix adjust. Identities = 272/312 (88%), Positives = 291/312 (94%), Gaps = 4/312 (1%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 ++PGDYDESDVK+RSGR SRPRTKTRP HADA+AAMVVSVDRGRWGCVLGG DRR+TAM Sbjct 1 MKPGDYDESDVKIRSGRGSRPRTKTRPGHADAQAAMVVSVDRGRWGCVLGGDVDRRVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGD+VDVVGDLSGR DTLARIVRR RRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDEVDVVGDLSGRTDTLARIVRRGERRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLVDR LIAAYAGGLTPILCLTKTDLAP EPF +QF DL+LTV Sbjct 121 DQLLIVVALADPPPRTGLVDRTLIAAYAGGLTPILCLTKTDLAPPEPFAEQFVDLDLTVV 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AG DDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVP+ADRAVG+VT+IGRGRHTST+ Sbjct 181 VAGRDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPDADRAVGDVTDIGRGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALP L+ SGWVIDTPGIRSFGLAHIQPD+V++AFSDLA+A +CPRGCGHMGPPA Sbjct 241 SVALP----LATSGWVIDTPGIRSFGLAHIQPDDVMMAFSDLADAIEDCPRGCGHMGPPA 296 Query 301 DPECALDTLSGP 312 DPECALDTL+GP Sbjct 297 DPECALDTLTGP 308 >gi|240170374|ref|ZP_04749033.1| hypothetical protein MkanA1_13760 [Mycobacterium kansasii ATCC 12478] Length=330 Score = 510 bits (1313), Expect = 1e-142, Method: Compositional matrix adjust. Identities = 296/330 (90%), Positives = 306/330 (93%), Gaps = 0/330 (0%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 +RPGDYDES VKVRSGR SRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGG PDRRITAM Sbjct 1 MRPGDYDESHVKVRSGRGSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGDPDRRITAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRR PRRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRGPRRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPIL LTKTDLAP EPF +QF DL+L V Sbjct 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILTLTKTDLAPPEPFAEQFVDLDLQVV 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AAG DDPLLAVADLL GKITVLLGHSGVGKSTLVNRLVPEADRAVGEVT+IGRGRHTST+ Sbjct 181 AAGRDDPLLAVADLLDGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTDIGRGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPL GSGWVIDTPGIRSFGLAHIQPD+VLLAF+DLA A +CPRGCGHMGPPA Sbjct 241 SVALPLQTGSEGSGWVIDTPGIRSFGLAHIQPDDVLLAFADLAAAIHDCPRGCGHMGPPA 300 Query 301 DPECALDTLSGPAARRAAAARRLLAVLSQT 330 DPECALD+LSG AARR AAARRLL VL +T Sbjct 301 DPECALDSLSGAAARRTAAARRLLGVLRET 330 >gi|333991604|ref|YP_004524218.1| hypothetical protein JDM601_2964 [Mycobacterium sp. JDM601] gi|333487572|gb|AEF36964.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=326 Score = 491 bits (1265), Expect = 5e-137, Method: Compositional matrix adjust. Identities = 277/329 (85%), Positives = 294/329 (90%), Gaps = 4/329 (1%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 ++PGDYDESDVKVRSGR SRPRTK RPEHADA +AMVVSVDRGRWGCVL G PDR+ITAM Sbjct 1 MKPGDYDESDVKVRSGRGSRPRTKIRPEHADARSAMVVSVDRGRWGCVLDGEPDRQITAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRR PRRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRGPRRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLV+R LIAAYAGGL PILCLTKTDLA PF QFADL+LTV Sbjct 121 DQLLIVVALADPPPRTGLVERTLIAAYAGGLVPILCLTKTDLADPGPFAGQFADLDLTVV 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AG DDPL AVA LL ITVLLGHSGVGKSTLVNRLVP+A RAVG VT+IGRGRHTST+ Sbjct 181 TAGRDDPLDAVAPLLQSHITVLLGHSGVGKSTLVNRLVPQAGRAVGLVTDIGRGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVAL L+GSGWVIDTPGIRSFGLAHI PD+VL+AFSDLA+A ECPRGCGH+GPPA Sbjct 241 SVAL----RLAGSGWVIDTPGIRSFGLAHIAPDDVLMAFSDLADAITECPRGCGHLGPPA 296 Query 301 DPECALDTLSGPAARRAAAARRLLAVLSQ 329 DPECALD+LSGPAARR AAAR LL+ L + Sbjct 297 DPECALDSLSGPAARRVAAARHLLSTLRE 325 >gi|145225274|ref|YP_001135952.1| GTPase EngC [Mycobacterium gilvum PYR-GCK] gi|315445572|ref|YP_004078451.1| GTPase [Mycobacterium sp. Spyr1] gi|145217760|gb|ABP47164.1| GTPase EngC [Mycobacterium gilvum PYR-GCK] gi|315263875|gb|ADU00617.1| predicted GTPase [Mycobacterium sp. Spyr1] Length=326 Score = 489 bits (1260), Expect = 2e-136, Method: Compositional matrix adjust. Identities = 256/316 (82%), Positives = 275/316 (88%), Gaps = 4/316 (1%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 + P +YDE+DV+VR GR SRPRTKTRP HADAE AMVV+VDRGRWGCVLG P RR+TAM Sbjct 1 MSPREYDETDVRVRPGRGSRPRTKTRPVHADAEHAMVVTVDRGRWGCVLGNDPGRRVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVD+VGDLSGR DTLARIVRR RRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVDIVGDLSGRTDTLARIVRRGERRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLV+RALIAAYAGGL PILCLTKTDLAPAEPF +QF DL+LTV Sbjct 121 DQLLIVVALADPPPRTGLVERALIAAYAGGLVPILCLTKTDLAPAEPFAEQFRDLDLTVL 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AG DD L V LLA K+T LLGHSGVGKSTLVNRLVPEADRA G VT+IGRGRHTST+ Sbjct 181 TAGRDDALETVDALLANKVTALLGHSGVGKSTLVNRLVPEADRATGAVTDIGRGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPL L G GWV+DTPGIRSFGLAHI PD+V++AFSDLA+A CPRGCGHMGPPA Sbjct 241 SVALPL---LHG-GWVVDTPGIRSFGLAHIAPDDVVMAFSDLADAIDGCPRGCGHMGPPA 296 Query 301 DPECALDTLSGPAARR 316 DP CALD L+G A R Sbjct 297 DPGCALDALTGAAEGR 312 >gi|120402769|ref|YP_952598.1| GTPase EngC [Mycobacterium vanbaalenii PYR-1] gi|119955587|gb|ABM12592.1| GTPase EngC [Mycobacterium vanbaalenii PYR-1] Length=326 Score = 477 bits (1227), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 257/316 (82%), Positives = 278/316 (88%), Gaps = 4/316 (1%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 + P +YDESDV++R GR SRPRTKTRPEHADA+ AMVV+VDRGRWGCVLG PDRR+TAM Sbjct 1 MSPREYDESDVRIRPGRGSRPRTKTRPEHADAQQAMVVTVDRGRWGCVLGRDPDRRVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDVDVVGDLSGR DTLARIVRR RRTVLRRTADDTDP ERVVVANA Sbjct 61 RARELGRTPIVVGDDVDVVGDLSGRTDTLARIVRRGERRTVLRRTADDTDPAERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTGLV+RALIAAYAGGL PILCLTKTDLAPAEPF QF DL+L + Sbjct 121 DQLLIVVALADPPPRTGLVERALIAAYAGGLVPILCLTKTDLAPAEPFAAQFRDLDLVIV 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AG DDPL AV LLA K+T LLGHSGVGKSTLVNRLVPEA+RA GEVT++G+GRHTST+ Sbjct 181 TAGRDDPLEAVGSLLADKVTALLGHSGVGKSTLVNRLVPEAERATGEVTDVGKGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALP L GWVIDTPGIRSFGLAHI+PD+V+LAFSDLAEA +CPRGCGHMGPPA Sbjct 241 SVALP----LRLGGWVIDTPGIRSFGLAHIEPDDVVLAFSDLAEAIDDCPRGCGHMGPPA 296 Query 301 DPECALDTLSGPAARR 316 DPECALD L+G A R Sbjct 297 DPECALDELTGAAQGR 312 >gi|169630628|ref|YP_001704277.1| hypothetical protein MAB_3547 [Mycobacterium abscessus ATCC 19977] gi|169242595|emb|CAM63623.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=326 Score = 469 bits (1208), Expect = 2e-130, Method: Compositional matrix adjust. Identities = 240/328 (74%), Positives = 274/328 (84%), Gaps = 4/328 (1%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 + P +YDESD ++R GR SRPRTK RP+HADA AMVV+VDRGRWGCVL P +++TAM Sbjct 1 MSPREYDESDARIRPGRRSRPRTKIRPDHADAAPAMVVTVDRGRWGCVLHDDPAQQVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGD V +VGDLSGRPDTLARIVR RRTVLRRTADDTDP ER+ VANA Sbjct 61 RARELGRTPIVVGDTVSLVGDLSGRPDTLARIVRLEERRTVLRRTADDTDPFERIFVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVA+ADPPPRTGLV+RALIAAYAGGLTPIL LTKTDLA + F QFADL + V Sbjct 121 DQLLIVVAVADPPPRTGLVERALIAAYAGGLTPILALTKTDLADPDSFAAQFADLNIRVI 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AG D+PL + ++L G++T LLGHSGVGKSTLVNRLVPEA RA GEVT +G+GRHTST+ Sbjct 181 GAGRDEPLAPIIEVLTGRLTALLGHSGVGKSTLVNRLVPEAGRATGEVTGVGKGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALP L SGWVIDTPGIRSFGLAHI+PD+VL AFSDL+EA +CPRGC H+GPPA Sbjct 241 SVALP----LYPSGWVIDTPGIRSFGLAHIRPDDVLAAFSDLSEAIEDCPRGCQHLGPPA 296 Query 301 DPECALDTLSGPAARRAAAARRLLAVLS 328 DPECALD L G +A+R A R+LL+VL+ Sbjct 297 DPECALDELEGASAKRVTAVRQLLSVLT 324 >gi|118469007|ref|YP_886255.1| ribosome small subunit-dependent GTPase RsgA [Mycobacterium smegmatis str. MC2 155] gi|118170294|gb|ABK71190.1| putative ribosome small subunit-dependent GTPase RsgA [Mycobacterium smegmatis str. MC2 155] Length=335 Score = 462 bits (1190), Expect = 3e-128, Method: Compositional matrix adjust. Identities = 243/308 (79%), Positives = 270/308 (88%), Gaps = 4/308 (1%) Query 5 DYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRARE 64 +YDESDV++R GR SRPRTK RPEHADA++AMVV+VDRGRWGC L PDR +TAMRARE Sbjct 8 NYDESDVRIRPGRGSRPRTKNRPEHADAQSAMVVTVDRGRWGCALDRDPDRVVTAMRARE 67 Query 65 LGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLL 124 LGRTPIVVGDDVDVVGDLSGRPDTLARIVRR RRTVLRRTADDTDPTERVVVANADQLL Sbjct 68 LGRTPIVVGDDVDVVGDLSGRPDTLARIVRRGERRTVLRRTADDTDPTERVVVANADQLL 127 Query 125 IVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGV 184 IVVALADPPPRTG V+RALIAAYAGGL P+LCLTK+DLA E F QFADL+LT+ AG Sbjct 128 IVVALADPPPRTGFVERALIAAYAGGLKPVLCLTKSDLAAPEAFAAQFADLDLTIVTAGR 187 Query 185 DDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVAL 244 DDP+ V LL G++TV LGHSGVGKSTLVNRL+PEADRA GEV+ +G+G+HTST+SVAL Sbjct 188 DDPIEPVRPLLTGQVTVFLGHSGVGKSTLVNRLIPEADRATGEVSGVGKGKHTSTQSVAL 247 Query 245 PLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPEC 304 P L G GWVIDTPGIRSFGLAHI+PD+V+LAFSDLA+ +CPRGCGHMGPPADPEC Sbjct 248 P----LDGDGWVIDTPGIRSFGLAHIEPDDVILAFSDLADTIEDCPRGCGHMGPPADPEC 303 Query 305 ALDTLSGP 312 ALD L+GP Sbjct 304 ALDALTGP 311 >gi|126433997|ref|YP_001069688.1| GTPase EngC [Mycobacterium sp. JLS] gi|126233797|gb|ABN97197.1| GTPase EngC [Mycobacterium sp. JLS] Length=326 Score = 461 bits (1186), Expect = 8e-128, Method: Compositional matrix adjust. Identities = 254/329 (78%), Positives = 286/329 (87%), Gaps = 4/329 (1%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 + P +YDESDV+VR GR SRPRTKTRPEHA+A +AMVV+VDRGRWGC L P+ +TAM Sbjct 1 MSPREYDESDVRVRPGRGSRPRTKTRPEHAEARSAMVVTVDRGRWGCALDRDPEHVVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDV+VVGDL+ RPDTLARIVRR+ RRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVEVVGDLTARPDTLARIVRRSERRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTG V+RALIAAYAGGL P+LCLTK+DLAPAEPF QF DL+LT+ Sbjct 121 DQLLIVVALADPPPRTGFVERALIAAYAGGLRPVLCLTKSDLAPAEPFAAQFTDLDLTII 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AG DD L V LL G++TVLLGHSGVGKSTLVNRLVP+A RA+GEV+ +G+GRHTST+ Sbjct 181 TAGRDDTLDGVVPLLTGQVTVLLGHSGVGKSTLVNRLVPQAHRAIGEVSGVGKGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPL D +GWVIDTPGIRSFGLAHI+PD+VLLAFSDLAEA +CPRGC HMGPPA Sbjct 241 SVALPLAD----AGWVIDTPGIRSFGLAHIEPDDVLLAFSDLAEAIADCPRGCRHMGPPA 296 Query 301 DPECALDTLSGPAARRAAAARRLLAVLSQ 329 DPECALD+L+G AA R AAAR LL L++ Sbjct 297 DPECALDSLTGAAAGRVAAARHLLGALNE 325 >gi|108798332|ref|YP_638529.1| GTPase EngC [Mycobacterium sp. MCS] gi|119867429|ref|YP_937381.1| GTPase EngC [Mycobacterium sp. KMS] gi|108768751|gb|ABG07473.1| GTPase EngC [Mycobacterium sp. MCS] gi|119693518|gb|ABL90591.1| GTPase EngC [Mycobacterium sp. KMS] Length=326 Score = 461 bits (1185), Expect = 1e-127, Method: Compositional matrix adjust. Identities = 257/329 (79%), Positives = 284/329 (87%), Gaps = 4/329 (1%) Query 1 LRPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAM 60 + P +YDESDV+VR GR SRPRTKTRPEHADA +AMVV+VDRGRWGC L P+ +TAM Sbjct 1 MSPREYDESDVRVRPGRGSRPRTKTRPEHADARSAMVVTVDRGRWGCALDRDPEHVVTAM 60 Query 61 RARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANA 120 RARELGRTPIVVGDDV+VVGDL+ RPDTLARIVRR RRTVLRRTADDTDPTERVVVANA Sbjct 61 RARELGRTPIVVGDDVEVVGDLTARPDTLARIVRRGERRTVLRRTADDTDPTERVVVANA 120 Query 121 DQLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVT 180 DQLLIVVALADPPPRTG V+RALIAAYAGGL PILCLTK+DLAPAEPF QF DL+LTV Sbjct 121 DQLLIVVALADPPPRTGFVERALIAAYAGGLRPILCLTKSDLAPAEPFAAQFTDLDLTVI 180 Query 181 AAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTR 240 AG DD L V LL G++TVLLGHSGVGKSTLVNRLVP+A RA+GEV+ +G+GRHTST+ Sbjct 181 TAGRDDTLDGVVPLLTGQVTVLLGHSGVGKSTLVNRLVPQAHRAIGEVSGVGKGRHTSTQ 240 Query 241 SVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 SVALPL D +GWVIDTPGIRSFGLAHI+PD+VLLAFSDLAEA +CPRGC HMGPPA Sbjct 241 SVALPLAD----AGWVIDTPGIRSFGLAHIEPDDVLLAFSDLAEAIADCPRGCRHMGPPA 296 Query 301 DPECALDTLSGPAARRAAAARRLLAVLSQ 329 DPECALD L+G AA R AAAR LL L++ Sbjct 297 DPECALDGLTGAAAGRVAAARHLLGALNE 325 >gi|325675710|ref|ZP_08155394.1| GTPase [Rhodococcus equi ATCC 33707] gi|325553681|gb|EGD23359.1| GTPase [Rhodococcus equi ATCC 33707] Length=326 Score = 454 bits (1167), Expect = 1e-125, Method: Compositional matrix adjust. Identities = 229/322 (72%), Positives = 261/322 (82%), Gaps = 4/322 (1%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 YDESDV++R G+ SRPRTK RPEHADA MVVS DRGRWG VLGG PDR + MRAREL Sbjct 2 YDESDVRIRPGKGSRPRTKNRPEHADAAEGMVVSKDRGRWGVVLGGDPDRLVVTMRAREL 61 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 GRTPIVVGD V VVGDLSG+PDTLARIVR A R TVLRRTADDTDP ER+VVANA+QLLI Sbjct 62 GRTPIVVGDQVSVVGDLSGKPDTLARIVRVADRSTVLRRTADDTDPFERIVVANAEQLLI 121 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 VVALADPPPRTG V+RAL+AAY GGL P+LCLTK+DLA + F FA L++ V AG D Sbjct 122 VVALADPPPRTGFVERALVAAYVGGLEPVLCLTKSDLATPDEFAATFAGLDVPVVVAGRD 181 Query 186 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALP 245 DP+ V ++L G++T L+GHSGVGKST+VNRLVP+ADRA G V+ +G+GRHTST+SVALP Sbjct 182 DPIEPVTEILEGRLTALIGHSGVGKSTMVNRLVPDADRATGVVSGVGKGRHTSTQSVALP 241 Query 246 LGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECA 305 L G GWVIDTPGIRSFGLAHI P+NV+ AF+DLA A +CPRGC H+GPPADPECA Sbjct 242 ----LPGGGWVIDTPGIRSFGLAHISPENVVEAFTDLAAAAEDCPRGCTHLGPPADPECA 297 Query 306 LDTLSGPAARRAAAARRLLAVL 327 LD L G +A R A RRLL L Sbjct 298 LDKLEGKSADRVEAVRRLLVAL 319 >gi|312140660|ref|YP_004007996.1| gtpase [Rhodococcus equi 103S] gi|311889999|emb|CBH49317.1| putative GTPase [Rhodococcus equi 103S] Length=326 Score = 451 bits (1159), Expect = 9e-125, Method: Compositional matrix adjust. Identities = 228/322 (71%), Positives = 260/322 (81%), Gaps = 4/322 (1%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 YDESDV++R G+ SRPRTK RPEHADA MVVS DRGRWG VLGG PDR + MRAREL Sbjct 2 YDESDVRIRPGKGSRPRTKNRPEHADAAEGMVVSKDRGRWGVVLGGDPDRLVVTMRAREL 61 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 GRTPIVVGD V VVGDLSG+PDTLARIVR A R TVLRRTADDTDP ER+VVANA+QLLI Sbjct 62 GRTPIVVGDQVSVVGDLSGKPDTLARIVRVADRSTVLRRTADDTDPFERIVVANAEQLLI 121 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 VVALADPPPRTG V+RAL+AAY GGL P+LCLTK+DLA + F FA L++ V AG D Sbjct 122 VVALADPPPRTGFVERALVAAYVGGLEPVLCLTKSDLATPDEFAATFAGLDVPVVVAGRD 181 Query 186 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALP 245 DP+ V ++L G++T L+GHSGVGKST+VNRLVP+ADRA G V+ +G+GRHTST+SVALP Sbjct 182 DPIEPVTEILEGRLTALIGHSGVGKSTMVNRLVPDADRATGVVSGVGKGRHTSTQSVALP 241 Query 246 LGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECA 305 L G GWVIDTPGIRSFGLAHI +NV+ AF+DLA A +CPRGC H+GPPADPECA Sbjct 242 ----LPGGGWVIDTPGIRSFGLAHISSENVVEAFTDLAAAAEDCPRGCTHLGPPADPECA 297 Query 306 LDTLSGPAARRAAAARRLLAVL 327 LD L G +A R A RRLL L Sbjct 298 LDKLEGKSADRVEAVRRLLVAL 319 >gi|226365807|ref|YP_002783590.1| GTPase [Rhodococcus opacus B4] gi|226244297|dbj|BAH54645.1| putative GTPase [Rhodococcus opacus B4] Length=346 Score = 446 bits (1148), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 235/325 (73%), Positives = 267/325 (83%), Gaps = 4/325 (1%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 YDESDV+VR GR +RPRTKTRPEH AE AMVVSVDRGRWGCVLGG P+R + MRAREL Sbjct 23 YDESDVRVRPGRGTRPRTKTRPEHLAAEPAMVVSVDRGRWGCVLGGDPERPLVTMRAREL 82 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 GRTPIVVGD+V VVGDLSG+PDTLARIVR A R TVLRRTADDTDP ER+VVANA QLLI Sbjct 83 GRTPIVVGDEVSVVGDLSGKPDTLARIVRVAERATVLRRTADDTDPYERIVVANAQQLLI 142 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 VVALADPPPRTG V+RAL+AAYAGGL+PI+CLTK+DL P E F FADL++ V AG D Sbjct 143 VVALADPPPRTGFVERALVAAYAGGLSPIVCLTKSDLEPPEEFASAFADLDVPVVVAGRD 202 Query 186 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALP 245 DP+ V +L+G++T L+GHSGVGKSTLVNRLVP+ADRAVG V+ +G+GRHTST+SVALP Sbjct 203 DPVDEVLAMLSGRLTALIGHSGVGKSTLVNRLVPDADRAVGVVSGVGKGRHTSTQSVALP 262 Query 246 LGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECA 305 L GWVIDTPGIRSFGLAHI P +V+ AFSDLA A +CPRGC H+GPPADPECA Sbjct 263 ----LPSGGWVIDTPGIRSFGLAHISPADVVAAFSDLAAAIEDCPRGCTHLGPPADPECA 318 Query 306 LDTLSGPAARRAAAARRLLAVLSQT 330 LD L G AA+R A R LL ++ Sbjct 319 LDHLEGKAAKRVDAVRHLLTAIASN 343 >gi|262203464|ref|YP_003274672.1| GTPase EngC [Gordonia bronchialis DSM 43247] gi|262086811|gb|ACY22779.1| GTPase EngC [Gordonia bronchialis DSM 43247] Length=343 Score = 442 bits (1136), Expect = 4e-122, Method: Compositional matrix adjust. Identities = 231/324 (72%), Positives = 258/324 (80%), Gaps = 2/324 (0%) Query 2 RPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMR 61 R YDESDV++R G+ +RPRTK RP H DA AMVVSVDRGRWGCVLGG PDR + MR Sbjct 4 RTSSYDESDVRIRPGKGTRPRTKQRPSHDDAADAMVVSVDRGRWGCVLGGDPDRPLVTMR 63 Query 62 ARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANAD 121 ARELGRTPIVVGD+V VVGDLSG PDTLARIVR A R TVLRRTADDTDP ER+VVANAD Sbjct 64 ARELGRTPIVVGDNVSVVGDLSGTPDTLARIVRVADRATVLRRTADDTDPYERIVVANAD 123 Query 122 QLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTA 181 QLLIV A+ADPPPRTG V+RAL AAY GGL+PILCLTK+DLA F FA L L + Sbjct 124 QLLIVTAMADPPPRTGFVERALAAAYVGGLSPILCLTKSDLADPAEFTAAFAGLGLPIVR 183 Query 182 AGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRS 241 AG DDPL V +L G +T L+GHSGVGKSTLVNRLVPEADRA G V+ +G+GRHTST+S Sbjct 184 AGRDDPLDEVLAMLTGHLTALIGHSGVGKSTLVNRLVPEADRATGVVSGVGKGRHTSTQS 243 Query 242 VALPL-GDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 VALPL GD L S WV+DTPGIRSFGLAH+ PD+++ AF DL +A CPRGC H+GPPA Sbjct 244 VALPLPGDGLPRS-WVVDTPGIRSFGLAHVTPDDIVDAFDDLHDAIEHCPRGCTHLGPPA 302 Query 301 DPECALDTLSGPAARRAAAARRLL 324 DPECALD L G + RRA A RRLL Sbjct 303 DPECALDELEGNSHRRAMAVRRLL 326 >gi|296138824|ref|YP_003646067.1| GTPase EngC [Tsukamurella paurometabola DSM 20162] gi|296026958|gb|ADG77728.1| GTPase EngC [Tsukamurella paurometabola DSM 20162] Length=330 Score = 434 bits (1115), Expect = 1e-119, Method: Compositional matrix adjust. Identities = 239/326 (74%), Positives = 264/326 (81%), Gaps = 4/326 (1%) Query 5 DYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRARE 64 +YDESDV+VR G+SSRPRTKTRP+H+DA AMVVSVDRGRWGC L G P+R I AMRARE Sbjct 5 EYDESDVRVRPGKSSRPRTKTRPDHSDAATAMVVSVDRGRWGCALDGDPERIIVAMRARE 64 Query 65 LGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLL 124 LGR+PIVVGD V VVGDLSGR DTLARIVR R TVLRRTADDTDP ER+VVANA QLL Sbjct 65 LGRSPIVVGDSVGVVGDLSGRKDTLARIVRVDERSTVLRRTADDTDPYERIVVANAQQLL 124 Query 125 IVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGV 184 IV ALADPPPRTG V+R LIAAYAGGLTP+LCLTK+DLA + F QFADL+L V AG Sbjct 125 IVTALADPPPRTGFVERTLIAAYAGGLTPVLCLTKSDLADPDEFTAQFADLDLQVLVAGR 184 Query 185 DDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVAL 244 DPL DLL G +T L+GHSGVGKSTLVNRLVP+A+RA G V+ +G+GRHTST+SVAL Sbjct 185 GDPLDEAHDLLTGHVTALIGHSGVGKSTLVNRLVPDANRATGVVSGVGKGRHTSTQSVAL 244 Query 245 PLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPEC 304 L D GWV+DTPGIRSFGLAHI D+VL AF DLAEAT +CPRGC H+GPPADPEC Sbjct 245 WLPD----GGWVVDTPGIRSFGLAHISTDDVLAAFPDLAEATADCPRGCTHLGPPADPEC 300 Query 305 ALDTLSGPAARRAAAARRLLAVLSQT 330 ALD L G A RRA A R LLA LS T Sbjct 301 ALDHLDGTAHRRAMAVRGLLADLSAT 326 >gi|54026563|ref|YP_120805.1| hypothetical protein nfa45900 [Nocardia farcinica IFM 10152] gi|54018071|dbj|BAD59441.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=318 Score = 427 bits (1098), Expect = 1e-117, Method: Compositional matrix adjust. Identities = 230/320 (72%), Positives = 260/320 (82%), Gaps = 5/320 (1%) Query 11 VKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRARELGRTPI 70 ++VR GR+SRPRTK RP+H DA+ AMVVSVDRGRWGCVL G P RRI AMRARELGRTPI Sbjct 1 MRVRPGRASRPRTKIRPQHTDAQQAMVVSVDRGRWGCVLDGDPQRRIVAMRARELGRTPI 60 Query 71 VVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLIVVALA 130 VVGD VDVVGDLSGRPDTLARIVR A R+TVLRRTADDTDP ERVVVANA+QL IVVALA Sbjct 61 VVGDQVDVVGDLSGRPDTLARIVRVAERQTVLRRTADDTDPFERVVVANAEQLFIVVALA 120 Query 131 DPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVDDPLLA 190 DPPPRTG V+RA++AAY GGL P+LCLTK DL F + F DL+LT+ G+DDPL Sbjct 121 DPPPRTGFVERAMVAAYVGGLHPVLCLTKRDLVADSAFAEAFDDLDLTIVHGGIDDPLEP 180 Query 191 VADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALPLGDTL 250 V DLL ++T +GHSGVGKSTLVNRLVP+ADRAVGEV+ +G+G+HTST+SVALP L Sbjct 181 VLDLLTDRLTAFIGHSGVGKSTLVNRLVPDADRAVGEVSGVGKGKHTSTQSVALP----L 236 Query 251 SGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECALDTLS 310 G GWVIDTPG+RSFGLAHI PD+V+ AFSDLAEA +CPRGC H+GPP DPECALD L Sbjct 237 PGGGWVIDTPGVRSFGLAHITPDDVIAAFSDLAEAIEDCPRGCTHLGPPTDPECALDQLP 296 Query 311 GPAARRAAAARRLLAVLSQT 330 G RR AA R LL L+ Sbjct 297 G-KERRVAAIRLLLVALNSN 315 >gi|343927658|ref|ZP_08767126.1| putative GTPase [Gordonia alkanivorans NBRC 16433] gi|343762299|dbj|GAA14052.1| putative GTPase [Gordonia alkanivorans NBRC 16433] Length=347 Score = 421 bits (1083), Expect = 6e-116, Method: Compositional matrix adjust. Identities = 230/327 (71%), Positives = 261/327 (80%), Gaps = 2/327 (0%) Query 2 RPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMR 61 R YDESDV+VR G+ +RPRTKTRP H DAE MVVSVDRGRWG VLGG PDRR+ MR Sbjct 4 RAASYDESDVRVRPGKGTRPRTKTRPSHDDAEQGMVVSVDRGRWGVVLGGDPDRRVVTMR 63 Query 62 ARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANAD 121 ARELGRTPIVVGDDV VVGDLSG+PDTLARIVR A RR+VLRRTADD+DP ER+VVANAD Sbjct 64 ARELGRTPIVVGDDVSVVGDLSGKPDTLARIVRVAERRSVLRRTADDSDPYERIVVANAD 123 Query 122 QLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTA 181 QLLIV A+ADPPPRTG V+RAL AAY GGL+PILCLTK+DLA F FADLEL V Sbjct 124 QLLIVTAMADPPPRTGFVERALAAAYVGGLSPILCLTKSDLADPTEFTAAFADLELPVIR 183 Query 182 AGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRS 241 AG DDPL + L G+IT +GHSGVGKSTLVNRLVP+A RA G V+ +G+GRHTST+S Sbjct 184 AGRDDPLDEILATLRGRITAFIGHSGVGKSTLVNRLVPDAYRATGVVSGVGKGRHTSTQS 243 Query 242 VALPL-GDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 VALPL GD++ GWV+DTPGIRSFGLAH+ D+++ AF DL +A ECPRGC H+GPPA Sbjct 244 VALPLPGDSVP-RGWVVDTPGIRSFGLAHVGADDIVAAFDDLQDAIAECPRGCTHLGPPA 302 Query 301 DPECALDTLSGPAARRAAAARRLLAVL 327 DPEC LD L G + RRA A R LL + Sbjct 303 DPECKLDGLGGHSYRRAMAVRHLLVAV 329 >gi|226305668|ref|YP_002765628.1| GTPase [Rhodococcus erythropolis PR4] gi|229489386|ref|ZP_04383249.1| GTPase EngC [Rhodococcus erythropolis SK121] gi|226184785|dbj|BAH32889.1| putative GTPase [Rhodococcus erythropolis PR4] gi|229323483|gb|EEN89241.1| GTPase EngC [Rhodococcus erythropolis SK121] Length=294 Score = 421 bits (1082), Expect = 7e-116, Method: Compositional matrix adjust. Identities = 211/295 (72%), Positives = 240/295 (82%), Gaps = 4/295 (1%) Query 36 MVVSVDRGRWGCVLGGRPDRRITAMRARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRR 95 MVVS DRGRWGCVLGG PDR I MRARELGRTPIVVGD VD+VGDLSG+ DTLARIVR Sbjct 1 MVVSKDRGRWGCVLGGDPDRLIVTMRARELGRTPIVVGDQVDIVGDLSGKTDTLARIVRV 60 Query 96 APRRTVLRRTADDTDPTERVVVANADQLLIVVALADPPPRTGLVDRALIAAYAGGLTPIL 155 + R TVLRRTADDTDP ER+VVANA+QLLIVVALADPPPRTG V+RAL+AAY GGLTPI+ Sbjct 61 SERSTVLRRTADDTDPFERIVVANAEQLLIVVALADPPPRTGFVERALVAAYVGGLTPIV 120 Query 156 CLTKTDLAPAEPFGKQFADLELTVTAAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVN 215 CLTK+DL P E F FADL++ V AG DDPL + +L K+T L+GHSGVGKSTLVN Sbjct 121 CLTKSDLEPPEEFASTFADLDIQVVVAGRDDPLDELTQILEHKLTALIGHSGVGKSTLVN 180 Query 216 RLVPEADRAVGEVTEIGRGRHTSTRSVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNV 275 RLVP+A+RAVG V+ +G+GRHTST+SVALP L+G GWVIDTPGIRSFGLAHI P+NV Sbjct 181 RLVPDANRAVGIVSGVGKGRHTSTQSVALP----LAGGGWVIDTPGIRSFGLAHISPENV 236 Query 276 LLAFSDLAEATRECPRGCGHMGPPADPECALDTLSGPAARRAAAARRLLAVLSQT 330 + AFSDLA A +CPRGC H+GPPADPEC LD L G +ARR A R+LL + Sbjct 237 VAAFSDLAAAIEDCPRGCTHLGPPADPECKLDLLEGKSARRVVAVRQLLEAIKSN 291 >gi|227541904|ref|ZP_03971953.1| possible GTP-binding protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227182347|gb|EEI63319.1| possible GTP-binding protein [Corynebacterium glucuronolyticum ATCC 51866] Length=333 Score = 413 bits (1061), Expect = 2e-113, Method: Compositional matrix adjust. Identities = 210/322 (66%), Positives = 247/322 (77%), Gaps = 5/322 (1%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 YDESDVK+R G+ SRPRTK RP H DA+ V++ DRGRWG +L G+ + +TAMRAREL Sbjct 9 YDESDVKIRPGKGSRPRTKKRPSHKDAKFGTVITKDRGRWGVILDGQ-EAPVTAMRAREL 67 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 GRT IVVGD V +VGD SG+ DTLARIV+ R +VLRRTADDTDP ER+VVANA+QLLI Sbjct 68 GRTTIVVGDRVGLVGDTSGKKDTLARIVKLEDRTSVLRRTADDTDPYERIVVANAEQLLI 127 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 V A+ADPPPR G V RALIAA+ G +TPILCLTK+DL PF ++FADL++ V AGV+ Sbjct 128 VTAVADPPPRAGFVARALIAAFVGNITPILCLTKSDLTDPTPFAEEFADLDVKVILAGVE 187 Query 186 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALP 245 D L V ++AG T L+GHSGVGKSTLVNRLVP+ADR GEV+ +G+GRHTST+SVALP Sbjct 188 DDLADVERVVAGHTTALIGHSGVGKSTLVNRLVPDADRVTGEVSAVGKGRHTSTQSVALP 247 Query 246 LGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECA 305 L GW+IDTPGIRSFGLAH+ D V+ F DLA A +CPRGC HMGPPADPECA Sbjct 248 ----LPQGGWIIDTPGIRSFGLAHVDADTVVQVFPDLASAAEDCPRGCTHMGPPADPECA 303 Query 306 LDTLSGPAARRAAAARRLLAVL 327 LD L G +ARR A R LL L Sbjct 304 LDALEGASARRVVAVRSLLEAL 325 >gi|227486936|ref|ZP_03917252.1| possible GTP-binding protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227093010|gb|EEI28322.1| possible GTP-binding protein [Corynebacterium glucuronolyticum ATCC 51867] Length=333 Score = 412 bits (1060), Expect = 3e-113, Method: Compositional matrix adjust. Identities = 210/322 (66%), Positives = 247/322 (77%), Gaps = 5/322 (1%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 YDESDVK+R G+ SRPRTK RP H DA+ V++ DRGRWG +L G+ + +TAMRAREL Sbjct 9 YDESDVKIRPGKGSRPRTKKRPSHKDAKFGTVITKDRGRWGVILDGQ-EAPVTAMRAREL 67 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 GRT IVVGD V +VGD SG+ DTLARIV+ R +VLRRTADDTDP ER+VVANA+QLLI Sbjct 68 GRTTIVVGDRVGLVGDTSGKKDTLARIVKLEDRTSVLRRTADDTDPYERIVVANAEQLLI 127 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 V A+ADPPPR G V RALIAA+ G +TPILCLTK+DL PF ++FADL++ V AGV+ Sbjct 128 VTAVADPPPRAGFVARALIAAFVGNITPILCLTKSDLTDPTPFAEEFADLDVKVILAGVE 187 Query 186 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALP 245 D L V ++AG T L+GHSGVGKSTLVNRLVP+ADR GEV+ +G+GRHTST+SVALP Sbjct 188 DDLADVERVVAGHTTALIGHSGVGKSTLVNRLVPDADRVTGEVSAVGKGRHTSTQSVALP 247 Query 246 LGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECA 305 L GW+IDTPGIRSFGLAH+ D V+ F DLA A +CPRGC HMGPPADPECA Sbjct 248 ----LPQGGWIIDTPGIRSFGLAHVDADTVVQVFPDLASAAEDCPRGCTHMGPPADPECA 303 Query 306 LDTLSGPAARRAAAARRLLAVL 327 LD L G +ARR A R LL L Sbjct 304 LDALEGASARRVVAVRSLLEAL 325 >gi|255323812|ref|ZP_05364938.1| GTPase EngC [Corynebacterium tuberculostearicum SK141] gi|255298992|gb|EET78283.1| GTPase EngC [Corynebacterium tuberculostearicum SK141] Length=341 Score = 406 bits (1043), Expect = 3e-111, Method: Compositional matrix adjust. Identities = 217/333 (66%), Positives = 252/333 (76%), Gaps = 10/333 (3%) Query 2 RPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMR 61 R G +DESDV+VR G+ SRPRTK RP+H DA+ MV++ DRGRWG L P R+TAMR Sbjct 4 RFGSFDESDVRVRPGKGSRPRTKDRPKHKDAKFGMVITKDRGRWGVALDDGP--RVTAMR 61 Query 62 ARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANAD 121 ARELGRT I VGD V VVGD SG+ DTLARIV+ R +VLRRTADDTDP ER+VVANAD Sbjct 62 ARELGRTAIEVGDRVGVVGDTSGKKDTLARIVKLEERTSVLRRTADDTDPYERIVVANAD 121 Query 122 QLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTA 181 Q+LIV A+ADPPPR+G V+RALIAA+ G + PILCLTKTDL PF +FADL++TV Sbjct 122 QMLIVTAVADPPPRSGFVERALIAAFVGNIHPILCLTKTDLTDPAPFAAEFADLDVTVVE 181 Query 182 AGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRS 241 AGVDD L AV + G +T L+GHSGVGKSTLVNRLVP+ADR GEV+ +G+GRHTST+S Sbjct 182 AGVDDGLEAVRHHIDGHVTALIGHSGVGKSTLVNRLVPDADRETGEVSGVGKGRHTSTQS 241 Query 242 VALPL--GDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPP 299 VALPL D +G GW+IDTPGIRSFGLAH+ D+VL F DLA A +CPRGC HMGPP Sbjct 242 VALPLPAEDAFTG-GWIIDTPGIRSFGLAHVDADDVLGVFEDLAAAIEDCPRGCTHMGPP 300 Query 300 ADPECALD--TLSGP---AARRAAAARRLLAVL 327 ADPEC LD L P +ARR A R LL L Sbjct 301 ADPECGLDDPALISPDTASARRRDAVRGLLEAL 333 >gi|326383276|ref|ZP_08204964.1| GTPase EngC [Gordonia neofelifaecis NRRL B-59395] gi|326198026|gb|EGD55212.1| GTPase EngC [Gordonia neofelifaecis NRRL B-59395] Length=335 Score = 404 bits (1039), Expect = 9e-111, Method: Compositional matrix adjust. Identities = 229/323 (71%), Positives = 259/323 (81%), Gaps = 3/323 (0%) Query 11 VKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRARELGRTPI 70 +++R G+ SRPRTK RP H DAE AMVVSVDRGRWGCVL G PDRR+ AMRARELGRTPI Sbjct 1 MRIRPGKGSRPRTKNRPAHDDAETAMVVSVDRGRWGCVLDGDPDRRVVAMRARELGRTPI 60 Query 71 VVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLIVVALA 130 VVGD V VVGDLSGRPDTLARIVR A R TVLRRTADD DP ER+VV NADQLLIV ALA Sbjct 61 VVGDQVGVVGDLSGRPDTLARIVRVADRTTVLRRTADDNDPYERIVVGNADQLLIVTALA 120 Query 131 DPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVDDPLLA 190 DPPPRTG V+RAL AAYAGGLTP+LCLTK+DLA + F FADL+L V AG DD L A Sbjct 121 DPPPRTGFVERALAAAYAGGLTPVLCLTKSDLAAPDEFTAHFADLQLPVVTAGRDDDLDA 180 Query 191 VADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALPLGDTL 250 + L G++T L+GHSGVGKSTLVNRLVP+ADRA GEV+ +G+GRHTST+SVALPL Sbjct 181 LWQTLEGRLTALIGHSGVGKSTLVNRLVPDADRATGEVSGVGKGRHTSTQSVALPLPGAE 240 Query 251 SGS---GWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECALD 307 G+ GWV+DTPGIRSFGLAH+ PD ++ AF DL EA CPRGC H+GPPADPECALD Sbjct 241 PGAAPRGWVVDTPGIRSFGLAHVTPDQIIDAFDDLREAIETCPRGCTHLGPPADPECALD 300 Query 308 TLSGPAARRAAAARRLLAVLSQT 330 L+G + RRA A R LLA +S + Sbjct 301 ALTGSSHRRAMAVRELLASVSSS 323 >gi|111023300|ref|YP_706272.1| GTPase [Rhodococcus jostii RHA1] gi|110822830|gb|ABG98114.1| possible GTPase [Rhodococcus jostii RHA1] Length=294 Score = 404 bits (1039), Expect = 9e-111, Method: Compositional matrix adjust. Identities = 212/295 (72%), Positives = 242/295 (83%), Gaps = 4/295 (1%) Query 36 MVVSVDRGRWGCVLGGRPDRRITAMRARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRR 95 MVVSVDRGRWGCVLGG P+R + MRARELGRTPIVVGD+V VVGDLSG+PDTLARIVR Sbjct 1 MVVSVDRGRWGCVLGGDPERPLVTMRARELGRTPIVVGDEVSVVGDLSGKPDTLARIVRV 60 Query 96 APRRTVLRRTADDTDPTERVVVANADQLLIVVALADPPPRTGLVDRALIAAYAGGLTPIL 155 A R TVLRRTADDTDP ER+VVANA QLLIVVALADPPPRTG V+RAL+AAYAGGL+PI+ Sbjct 61 AERSTVLRRTADDTDPYERIVVANAQQLLIVVALADPPPRTGFVERALVAAYAGGLSPIV 120 Query 156 CLTKTDLAPAEPFGKQFADLELTVTAAGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVN 215 CLTK+DL P E F FADL++ V AG DDP+ V +L+G++T L+GHSGVGKSTLVN Sbjct 121 CLTKSDLEPPEEFASAFADLDVPVVVAGRDDPVDEVLSMLSGRLTALIGHSGVGKSTLVN 180 Query 216 RLVPEADRAVGEVTEIGRGRHTSTRSVALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNV 275 RLVP+ADRAVG V+ +G+GRHTST+SVALP L GW IDTPGIRSFGLAHI P+NV Sbjct 181 RLVPDADRAVGVVSGVGKGRHTSTQSVALP----LPTGGWAIDTPGIRSFGLAHISPENV 236 Query 276 LLAFSDLAEATRECPRGCGHMGPPADPECALDTLSGPAARRAAAARRLLAVLSQT 330 + AFSDLA A +CPRGC H+GPPADPECALD L G AA+R A R LL ++ Sbjct 237 VAAFSDLAAAIEDCPRGCTHLGPPADPECALDLLEGKAAKRVDAVRHLLTAIASN 291 >gi|334563875|ref|ZP_08516866.1| hypothetical protein CbovD2_04817 [Corynebacterium bovis DSM 20582] Length=346 Score = 403 bits (1036), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 218/326 (67%), Positives = 255/326 (79%), Gaps = 7/326 (2%) Query 5 DYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRR---ITAMR 61 D+DESDV+VR G+ SRPRTK RP H DAE VVS DRGRWG VL RP+ R + MR Sbjct 17 DWDESDVRVRPGKGSRPRTKDRPSHLDAETGTVVSRDRGRWGVVLDDRPETRLRPVVCMR 76 Query 62 ARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANAD 121 ARE+GRT +VVGD V VVGD SGRP TLARIVR R +VLRRTADDTDP ERVVVANAD Sbjct 77 AREMGRTAVVVGDRVGVVGDTSGRPGTLARIVRLEERTSVLRRTADDTDPYERVVVANAD 136 Query 122 QLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTA 181 +LLIV ALADPPPR GLV+R L+AA+ GG+TP+LCLTKTDLA AE F QF DL++ + Sbjct 137 RLLIVTALADPPPRAGLVERTLVAAFVGGVTPVLCLTKTDLADAEEFTAQFRDLDVEIVQ 196 Query 182 AGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRS 241 GV DPL V +++ ++T L+GHSGVGKSTLVNRLVP+ADRA G V+ +G+GRHTS++S Sbjct 197 CGVHDPLGPVEEIVHNRVTALVGHSGVGKSTLVNRLVPDADRATGSVSGVGKGRHTSSQS 256 Query 242 VALPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPAD 301 VALPL D GW+IDTPGIRSFGLAH+ PD V+ AF DL + +CPRGC HMGPPAD Sbjct 257 VALPLPD----GGWIIDTPGIRSFGLAHVSPDQVIEAFDDLRDVVADCPRGCTHMGPPAD 312 Query 302 PECALDTLSGPAARRAAAARRLLAVL 327 PECALDTL+G +ARR A R+LLA L Sbjct 313 PECALDTLTGTSARRVTAVRQLLAAL 338 >gi|311739812|ref|ZP_07713646.1| possible GTP-binding protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311304885|gb|EFQ80954.1| possible GTP-binding protein [Corynebacterium pseudogenitalium ATCC 33035] Length=341 Score = 402 bits (1033), Expect = 4e-110, Method: Compositional matrix adjust. Identities = 215/333 (65%), Positives = 252/333 (76%), Gaps = 10/333 (3%) Query 2 RPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMR 61 R G +DESDV+VR G+ SRPRTK RP+H +A+ MV++ DRGRWG L P R+TAMR Sbjct 4 RFGSFDESDVRVRPGKGSRPRTKDRPKHKNAKFGMVITKDRGRWGVALDDGP--RVTAMR 61 Query 62 ARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANAD 121 ARELGRT I VGD V VVGD SG+ DTLARIV+ R +VLRRTADDTDP ER+VVANAD Sbjct 62 ARELGRTAIEVGDRVGVVGDTSGKKDTLARIVKLEERTSVLRRTADDTDPYERIVVANAD 121 Query 122 QLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTA 181 Q+LIV A+ADPPPR+G V+RALIAA+ G + PILCLTKTDL PF +FADL++TV Sbjct 122 QMLIVTAVADPPPRSGFVERALIAAFVGNIHPILCLTKTDLTDPAPFAAEFADLDVTVVE 181 Query 182 AGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRS 241 AGV+D L AV + G +T L+GHSGVGKSTLVNRLVP+ADR GEV+ +G+GRHTST+S Sbjct 182 AGVEDGLEAVRQHIDGHVTALIGHSGVGKSTLVNRLVPDADRETGEVSGVGKGRHTSTQS 241 Query 242 VALPL--GDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPP 299 VALPL D +G GW+IDTPGIRSFGLAH+ D+VL F DLA A +CPRGC HMGPP Sbjct 242 VALPLPAEDAFTG-GWIIDTPGIRSFGLAHVDADDVLGVFEDLAAAIEDCPRGCTHMGPP 300 Query 300 ADPECALD--TLSGP---AARRAAAARRLLAVL 327 ADPEC LD L P +ARR A R LL L Sbjct 301 ADPECGLDDPALIPPDTASARRRDAVRGLLEAL 333 >gi|296118813|ref|ZP_06837389.1| putative ribosome small subunit-dependent GTPase RsgA [Corynebacterium ammoniagenes DSM 20306] gi|295968302|gb|EFG81551.1| putative ribosome small subunit-dependent GTPase RsgA [Corynebacterium ammoniagenes DSM 20306] Length=329 Score = 401 bits (1031), Expect = 7e-110, Method: Compositional matrix adjust. Identities = 214/325 (66%), Positives = 245/325 (76%), Gaps = 9/325 (2%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 YDESDV+VR G+ SRPRTK RP H DA+ MV++ DRGRWG L P I AMRARE+ Sbjct 5 YDESDVRVRPGKGSRPRTKDRPTHDDAKFGMVITKDRGRWGVALDDGP--TIVAMRAREM 62 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 GRTP+ VGD V VVGD SG+ DTLARIV+ R +VLRRTADDTDP ER+VVANADQ+LI Sbjct 63 GRTPVEVGDRVGVVGDTSGKKDTLARIVKLEERTSVLRRTADDTDPYERIVVANADQMLI 122 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 V A+ADPPPR G V+RALIAA+ G + PILCLTKTDLA A PF + FADL +TV AGVD Sbjct 123 VTAVADPPPREGFVERALIAAFVGDVHPILCLTKTDLADAAPFAEAFADLNVTVVEAGVD 182 Query 186 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALP 245 D L AV+ L++G IT L+GHSGVGKSTLVNRLVP+A R GEV+ +G+GRHTST+SVAL Sbjct 183 DDLDAVSQLISGHITALIGHSGVGKSTLVNRLVPDAFRETGEVSAVGKGRHTSTQSVALR 242 Query 246 L-GDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPEC 304 L GD GW+IDTPGIRSFGLAH+ D VL FSDL +CPRGC H GPPADPEC Sbjct 243 LPGD----DGWIIDTPGIRSFGLAHVDADTVLGVFSDLDAIVEDCPRGCTHAGPPADPEC 298 Query 305 ALDTLS--GPAARRAAAARRLLAVL 327 ALD + ARR A R LLA L Sbjct 299 ALDKIEEGTSTARRRDAVRALLAAL 323 >gi|25027334|ref|NP_737388.1| hypothetical protein CE0778 [Corynebacterium efficiens YS-314] gi|23492615|dbj|BAC17588.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=337 Score = 401 bits (1031), Expect = 7e-110, Method: Compositional matrix adjust. Identities = 207/322 (65%), Positives = 241/322 (75%), Gaps = 6/322 (1%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 +DESDV++R + +RPRTK RP H DA MVV+ DRGRWG VL GR D +T MRAREL Sbjct 14 WDESDVRIRPSKGTRPRTKDRPSHEDALVGMVVTKDRGRWGVVLDGRSDAIVT-MRAREL 72 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 GRTPI VGD V VVGD SG+P TLARIVR R +VLRRTADDTDP ER+VVANADQLLI Sbjct 73 GRTPIEVGDRVAVVGDTSGQPGTLARIVRLEERTSVLRRTADDTDPYERIVVANADQLLI 132 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 V A+ADPPPR G V+RALIAA+ G + PILCLTK+DLA F +F LE+ V G+D Sbjct 133 VSAVADPPPRAGFVERALIAAFVGNIQPILCLTKSDLADPSEFAAEFEALEVPVVVCGID 192 Query 186 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALP 245 DPL V +++ G IT +GHSGVGKSTLVNRLVP+A R G V+ +G+GRHTST+SVALP Sbjct 193 DPLDDVLEVVEGHITAFIGHSGVGKSTLVNRLVPDAHRETGTVSGVGKGRHTSTQSVALP 252 Query 246 LGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECA 305 + + GW+IDTPGIRSFGLAH+ D V+ F DLA A +CPRGC HMGPPADPECA Sbjct 253 VKN-----GWIIDTPGIRSFGLAHVDADTVVGVFEDLAAAAEDCPRGCTHMGPPADPECA 307 Query 306 LDTLSGPAARRAAAARRLLAVL 327 LD L G +ARR A R LL L Sbjct 308 LDQLEGASARRVEAVRTLLEAL 329 >gi|227505522|ref|ZP_03935571.1| possible GTP-binding protein [Corynebacterium striatum ATCC 6940] gi|227197886|gb|EEI77934.1| possible GTP-binding protein [Corynebacterium striatum ATCC 6940] Length=339 Score = 399 bits (1024), Expect = 5e-109, Method: Compositional matrix adjust. Identities = 206/326 (64%), Positives = 247/326 (76%), Gaps = 6/326 (1%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 YDESDV++R G+ SRPRTK RP+H DA MVV+ DRGRWG L P +TAMRAREL Sbjct 8 YDESDVRIRPGKGSRPRTKDRPKHKDARFGMVVTKDRGRWGVALDDGP--LVTAMRAREL 65 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 GRT + VGD V VVGD +GR DTLARIV+ R +VLRRTADDTDP ER+VVANAD++LI Sbjct 66 GRTAVEVGDRVGVVGDTTGRKDTLARIVKLEDRTSVLRRTADDTDPYERIVVANADRMLI 125 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 V A+ADPPPR+G V+RALIAA+ G + P+LCLTKTDL PF +FADL++TV AGV+ Sbjct 126 VTAVADPPPRSGFVERALIAAFVGNVHPVLCLTKTDLTDPSPFAAEFADLDVTVVEAGVN 185 Query 186 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALP 245 D L AV +++ G +T L+GHSGVGKSTLVNRLVP+A R GEV+ +G+GRHTST+SVALP Sbjct 186 DCLDAVHNVIDGHVTALIGHSGVGKSTLVNRLVPDAQRETGEVSAVGKGRHTSTQSVALP 245 Query 246 L-GDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPEC 304 L +T GW+IDTPGIRSFGLAH+ D +L F DLA A +CPRGC H+GPPADPEC Sbjct 246 LPKETCPHGGWIIDTPGIRSFGLAHVDADTILGVFDDLAAAIEDCPRGCTHVGPPADPEC 305 Query 305 ALD---TLSGPAARRAAAARRLLAVL 327 LD +ARR A R+LLA L Sbjct 306 GLDLNINEDSASARRRDAVRKLLAAL 331 >gi|227502898|ref|ZP_03932947.1| possible GTP-binding protein [Corynebacterium accolens ATCC 49725] gi|227076320|gb|EEI14283.1| possible GTP-binding protein [Corynebacterium accolens ATCC 49725] Length=344 Score = 398 bits (1023), Expect = 6e-109, Method: Compositional matrix adjust. Identities = 218/335 (66%), Positives = 249/335 (75%), Gaps = 11/335 (3%) Query 2 RPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMR 61 R G +DESDV+VR G+ SRPRTK RP+H +A+ MV++ DRGRWG L P +TAMR Sbjct 4 RFGSFDESDVRVRPGKGSRPRTKDRPKHKNAKYGMVITKDRGRWGVALDDGP--TVTAMR 61 Query 62 ARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANAD 121 ARELGRT I VGD V VVGD SG DTLARIV+ A R +VLRRTADDTDP ER+VVANAD Sbjct 62 ARELGRTAIEVGDRVGVVGDTSGAKDTLARIVKLADRTSVLRRTADDTDPYERIVVANAD 121 Query 122 QLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTA 181 QLLIV A+ADPPPR+G V+RALIAA+ G L PILCLTKTDLA PF ++FADL++TV Sbjct 122 QLLIVSAVADPPPRSGFVERALIAAFVGNLHPILCLTKTDLADPTPFAEEFADLDVTVVE 181 Query 182 AGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRS 241 AGV+D L AV + G IT L+GHSGVGKSTLVNRLVP+A+R GEV+ IG+GRHTST+S Sbjct 182 AGVEDGLEAVRAQVDGHITALIGHSGVGKSTLVNRLVPDAERETGEVSGIGKGRHTSTQS 241 Query 242 VALPL----GDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMG 297 VALPL T S GW+IDTPGIRSFGLAH+ D +L F DLA A ECPRGC H G Sbjct 242 VALPLPTDAPSTDSQGGWIIDTPGIRSFGLAHVDADTILGVFEDLAAAIEECPRGCTHAG 301 Query 298 PPADPECALD----TLSGPA-ARRAAAARRLLAVL 327 PPADPEC LD G A ARR A R LL L Sbjct 302 PPADPECGLDDPEIIPEGTATARRRDAVRGLLQAL 336 >gi|227832513|ref|YP_002834220.1| hypothetical protein cauri_0685 [Corynebacterium aurimucosum ATCC 700975] gi|227453529|gb|ACP32282.1| hypothetical protein cauri_0685 [Corynebacterium aurimucosum ATCC 700975] Length=340 Score = 396 bits (1018), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 210/332 (64%), Positives = 249/332 (75%), Gaps = 8/332 (2%) Query 2 RPGDYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMR 61 R YDESDV++R G+ SRPRTK RP+H DA+ MV++ DRGRWG L +TAMR Sbjct 4 RASSYDESDVRIRPGKGSRPRTKDRPKHKDAKFGMVITKDRGRWGVALDN-DGPVVTAMR 62 Query 62 ARELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANAD 121 ARE+GRTPI VGD V VVGD SG+ DTLARIV+ R +VLRRTADDTDP ER+VVANAD Sbjct 63 AREMGRTPIEVGDRVGVVGDTSGKKDTLARIVKLEERTSVLRRTADDTDPYERIVVANAD 122 Query 122 QLLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTA 181 +LLIV A+ADPPPR+G V+RALIAA+AG + P+LCLTKTDL PF ++FADL++TV Sbjct 123 RLLIVSAVADPPPRSGFVERALIAAFAGNIQPVLCLTKTDLTDPTPFAQEFADLDVTVVE 182 Query 182 AGVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRS 241 AGVDD L V + G +T L+GHSGVGKSTLVNRLVP+A+R GEV+ +G+GRHTST+S Sbjct 183 AGVDDGLEQVCAAIDGHVTALIGHSGVGKSTLVNRLVPDANRETGEVSAVGKGRHTSTQS 242 Query 242 VALPL---GDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGP 298 VAL L G T G GW+IDTPGIRSFGLAHI +NV+ F DLA+A +CPRGC H GP Sbjct 243 VALRLPAEGSTPHG-GWIIDTPGIRSFGLAHIDAENVIEVFDDLAKAIEDCPRGCTHAGP 301 Query 299 PADPECALD---TLSGPAARRAAAARRLLAVL 327 PADPEC LD +ARR A R LLA L Sbjct 302 PADPECGLDLSLEEGTASARRRDAVRGLLASL 333 >gi|62389651|ref|YP_225053.1| hypothetical protein cg0872 [Corynebacterium glutamicum ATCC 13032] gi|145294926|ref|YP_001137747.1| hypothetical protein cgR_0872 [Corynebacterium glutamicum R] gi|21323529|dbj|BAB98156.1| Predicted GTPases [Corynebacterium glutamicum ATCC 13032] gi|41324986|emb|CAF19467.1| putative GTPase [Corynebacterium glutamicum ATCC 13032] gi|140844846|dbj|BAF53845.1| hypothetical protein [Corynebacterium glutamicum R] Length=329 Score = 396 bits (1018), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 208/322 (65%), Positives = 241/322 (75%), Gaps = 6/322 (1%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 YDESDV+VR G+ +RPRTK RP H +A MVV+ DRGRWG VL GR D +T MRAREL Sbjct 6 YDESDVRVRPGKGTRPRTKDRPSHENALVGMVVTKDRGRWGVVLDGRQDAIVT-MRAREL 64 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 GRT I VGD V VVGD SGRP +LARIVR R +VLRRTADDTDP ER+VVANADQLLI Sbjct 65 GRTAIEVGDRVGVVGDTSGRPGSLARIVRLEERTSVLRRTADDTDPFERIVVANADQLLI 124 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 V A+ADPPPR G V+RALIAA+ G L P+LCLTK+DLA F +F LE+ V GVD Sbjct 125 VSAVADPPPRAGFVERALIAAFVGNLQPVLCLTKSDLADPAEFAAEFEALEVPVVVCGVD 184 Query 186 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALP 245 DPL V +++ G IT L+GHSGVGKSTLVNRLVP+ADR G V+ +G+GRHTST+SVAL Sbjct 185 DPLDPVLEVVEGHITALIGHSGVGKSTLVNRLVPDADRETGVVSGVGKGRHTSTQSVALA 244 Query 246 LGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECA 305 + + GW+IDTPGIRSFGLAH+ D V+ F DLA A +CPRGC H+GPPADP CA Sbjct 245 IDN-----GWIIDTPGIRSFGLAHVDADTVVGVFDDLALAAEDCPRGCSHLGPPADPGCA 299 Query 306 LDTLSGPAARRAAAARRLLAVL 327 LD L G +ARR A R LL L Sbjct 300 LDRLEGASARRVEAVRALLVAL 321 >gi|305679919|ref|ZP_07402729.1| putative ribosome small subunit-dependent GTPase A [Corynebacterium matruchotii ATCC 14266] gi|305660539|gb|EFM50036.1| putative ribosome small subunit-dependent GTPase A [Corynebacterium matruchotii ATCC 14266] Length=333 Score = 389 bits (1000), Expect = 3e-106, Method: Compositional matrix adjust. Identities = 196/326 (61%), Positives = 241/326 (74%), Gaps = 8/326 (2%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRR--ITAMRAR 63 +DESDVK+R + SRPRTK RP+H DA+ MV++ DRGRWG VL + + I MRAR Sbjct 5 WDESDVKIRPSKRSRPRTKDRPKHDDAKFGMVITKDRGRWGVVLDDQSAQENPIVCMRAR 64 Query 64 ELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQL 123 ELGRTPI VGD V +VGD SGR DTLARIV+ A R++VLRRTADDTDP ER+VVANA+QL Sbjct 65 ELGRTPIEVGDRVGIVGDTSGRKDTLARIVKLAERQSVLRRTADDTDPYERIVVANAEQL 124 Query 124 LIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAG 183 LIV A+ADPPPRTG V+RAL+AA+ G L PI+CLTK+DLA F +F L + V G Sbjct 125 LIVCAVADPPPRTGFVERALVAAFVGNLQPIICLTKSDLADPTQFATEFDALNVPVVICG 184 Query 184 VDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVA 243 ++D L + D+++G +T L+GHSGVGKSTLVNR++P A R GEV+ +G+GRHTST++VA Sbjct 185 INDHLEPILDIVSGHVTALIGHSGVGKSTLVNRIIPHAQRETGEVSGVGKGRHTSTQTVA 244 Query 244 LPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPE 303 L L GW+IDTPGIRSFGLAH+ D V+ F DLAEA +CPRGC H GPP DPE Sbjct 245 L----RLPTDGWIIDTPGIRSFGLAHVNADTVVGVFEDLAEAVHDCPRGCTHAGPPTDPE 300 Query 304 CALDTLS--GPAARRAAAARRLLAVL 327 C LD+ + P RR A R+LLA L Sbjct 301 CQLDSFNIDSPTGRRVIAVRKLLAAL 326 >gi|172040169|ref|YP_001799883.1| hypothetical protein cur_0489 [Corynebacterium urealyticum DSM 7109] gi|171851473|emb|CAQ04449.1| hypothetical protein cu0489 [Corynebacterium urealyticum DSM 7109] Length=336 Score = 388 bits (997), Expect = 5e-106, Method: Compositional matrix adjust. Identities = 208/323 (65%), Positives = 248/323 (77%), Gaps = 6/323 (1%) Query 6 YDESDVKVRSGR-SSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRARE 64 +DESDV+VR R SRPRTK RP+H DA+ MV+S DRGRWG VL +T M ARE Sbjct 6 WDESDVRVRPNRRGSRPRTKQRPKHKDAKWGMVISRDRGRWGVVLD-ETGVEVTCMLARE 64 Query 65 LGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLL 124 +GRTPIVVGD V VVGD SGR DTLARIVR+A R TVLRRTADDTDP ER+VVANA LL Sbjct 65 MGRTPIVVGDRVGVVGDTSGRKDTLARIVRQAERHTVLRRTADDTDPYERIVVANAKNLL 124 Query 125 IVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGV 184 IV A+ADPPPR G V+RALIAA+ GGL P+LCLTKTDLA E F +F +L++ V G Sbjct 125 IVTAVADPPPRAGFVERALIAAFVGGLQPVLCLTKTDLADPEAFAAEFRELDVPVHYTGT 184 Query 185 DDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVAL 244 + L + +++ G+++ L+GHSGVGKST+VNRLVP+ADR G+V+ +G+GRHTST+SVAL Sbjct 185 SNDLAELTEVITGEVSALIGHSGVGKSTMVNRLVPDADRETGDVSGVGKGRHTSTQSVAL 244 Query 245 PLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPEC 304 P L G GW+IDTPGIRSFGLAH+ PD V+ F DL E ++CPRGC H+GPPADPEC Sbjct 245 P----LPGGGWIIDTPGIRSFGLAHVDPDTVVQVFDDLREVVQDCPRGCTHLGPPADPEC 300 Query 305 ALDTLSGPAARRAAAARRLLAVL 327 ALDTL G + RRAAA RRLL L Sbjct 301 ALDTLEGASGRRAAAVRRLLTAL 323 >gi|340795121|ref|YP_004760584.1| hypothetical protein CVAR_2161 [Corynebacterium variabile DSM 44702] gi|340535031|gb|AEK37511.1| hypothetical protein CVAR_2161 [Corynebacterium variabile DSM 44702] Length=336 Score = 386 bits (992), Expect = 2e-105, Method: Compositional matrix adjust. Identities = 214/326 (66%), Positives = 249/326 (77%), Gaps = 7/326 (2%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVL-GGRPDRR-ITAMRAR 63 YDESDVKVR G+ SRPRTK RP H DAE MVV+ DRGRWG V+ G PD MRAR Sbjct 6 YDESDVKVRPGKGSRPRTKDRPSHKDAETGMVVTKDRGRWGVVIDGADPDASPAICMRAR 65 Query 64 ELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQL 123 E+GRT +VVGD V VVGD SG TLARIVR R+TVLRRTADDTD ERVVVANADQL Sbjct 66 EMGRTAVVVGDRVAVVGDTSGLDGTLARIVRLEDRKTVLRRTADDTDSYERVVVANADQL 125 Query 124 LIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAG 183 LIV A+ADPPPR+G V+RALIAA+AGGLTP++CLTK+DLA F +FADL++ V G Sbjct 126 LIVTAVADPPPRSGFVERALIAAFAGGLTPVICLTKSDLADPSEFAAEFADLDVQVVVCG 185 Query 184 VDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVA 243 DDPL V DL+ G +T L+GHSGVGKSTLVNRLVP+ADRA G V+ +G+GRHTST+SVA Sbjct 186 RDDPLTPVTDLVHGHLTALIGHSGVGKSTLVNRLVPDADRATGVVSGVGKGRHTSTQSVA 245 Query 244 --LPLGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPAD 301 LP G+ +GW++DTPGIRSFGLAH+ P+ V+ F DL + +CPRGC H GPPAD Sbjct 246 LRLPGGEN---AGWIVDTPGIRSFGLAHVDPETVIGVFEDLRDVVEDCPRGCTHAGPPAD 302 Query 302 PECALDTLSGPAARRAAAARRLLAVL 327 PECALD L+G +ARR AA R LL L Sbjct 303 PECALDRLTGASARRVAAVRVLLEAL 328 >gi|68536713|ref|YP_251418.1| hypothetical protein jk1626 [Corynebacterium jeikeium K411] gi|68264312|emb|CAI37800.1| hypothetical protein jk1626 [Corynebacterium jeikeium K411] Length=335 Score = 385 bits (989), Expect = 5e-105, Method: Compositional matrix adjust. Identities = 204/322 (64%), Positives = 244/322 (76%), Gaps = 5/322 (1%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 +DESDV+VR G+ SRPRTK RP H +A+ MVVS DRGRWG VL +T MRARE+ Sbjct 11 WDESDVRVRPGKGSRPRTKDRPSHKNAKRGMVVSKDRGRWGVVLD-ENGTLVTCMRAREM 69 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 GRT +VVGD V VVGD SG+ DTLARIVR R ++LRRTADDTD ER+VVANAD LLI Sbjct 70 GRTNVVVGDHVSVVGDTSGKKDTLARIVRLEDRTSILRRTADDTDSFERIVVANADYLLI 129 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 V A+ADPPPRTG V+RALIAA+ GGLTP++CLTK+DLA F +F DL++ V GV Sbjct 130 VSAVADPPPRTGFVERALIAAFVGGLTPLVCLTKSDLADPSAFAAEFRDLDVEVLTTGVS 189 Query 186 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALP 245 D L + + + GK++ L+GHSGVGKSTL NRL+P+A+RA GEV+ +G+GRHTST+SVAL Sbjct 190 DSLDELTEHITGKVSALVGHSGVGKSTLFNRLIPDAERATGEVSGVGKGRHTSTQSVAL- 248 Query 246 LGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECA 305 L GW+IDTPGIRS GLAH+ PD V+ F DL E T +CPRGC HMGPPADPECA Sbjct 249 ---QLPAGGWIIDTPGIRSLGLAHVDPDTVVHVFEDLREVTEDCPRGCTHMGPPADPECA 305 Query 306 LDTLSGPAARRAAAARRLLAVL 327 LDTL+G +ARR A RRLL L Sbjct 306 LDTLTGASARRVTAIRRLLEAL 327 >gi|257057047|ref|YP_003134879.1| ribosome small subunit-dependent GTPase A [Saccharomonospora viridis DSM 43017] gi|256586919|gb|ACU98052.1| ribosome small subunit-dependent GTPase A [Saccharomonospora viridis DSM 43017] Length=333 Score = 384 bits (986), Expect = 1e-104, Method: Compositional matrix adjust. Identities = 202/322 (63%), Positives = 243/322 (76%), Gaps = 7/322 (2%) Query 7 DESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRARELG 66 DESDV+VR G+ SRPR+K RP HADA +AMVV+VDRGRW C L P+R +TAMRARELG Sbjct 9 DESDVRVRPGKGSRPRSKRRPAHADAVSAMVVAVDRGRWRCALDDDPERIVTAMRARELG 68 Query 67 RTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLIV 126 RTPIVVGD V +VGD+SG PDTLARIVR R +VLRRTADDTDP ERVVVANA+QLLIV Sbjct 69 RTPIVVGDRVKLVGDVSGTPDTLARIVRVLERESVLRRTADDTDPYERVVVANAEQLLIV 128 Query 127 VALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVDD 186 +LADPPPRTG +DR L+A Y GGL P+LCLTK DLA + +ADL++ D+ Sbjct 129 TSLADPPPRTGFIDRCLVACYTGGLDPVLCLTKADLASPDELLAYYADLDVPAVVTRYDE 188 Query 187 PLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALPL 246 + ++L G+++ L+GHSGVGKSTLVNRLVP+AD A GEV+ IG+GRHTS +VALPL Sbjct 189 DSPRLREILRGRVSALVGHSGVGKSTLVNRLVPDADLATGEVSAIGKGRHTSVAAVALPL 248 Query 247 GDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECAL 306 + GWVIDTPG+RSFGLAH+ PD ++ AF AEA ECP CGH+G P DP+CAL Sbjct 249 PE----GGWVIDTPGVRSFGLAHVTPDELVAAFPQFAEAAEECPPNCGHLGAPEDPDCAL 304 Query 307 DTL--SGPAAR-RAAAARRLLA 325 D + SG A+ R + RRLLA Sbjct 305 DDVVASGEASSARLESLRRLLA 326 >gi|300779604|ref|ZP_07089460.1| GTPase EngC [Corynebacterium genitalium ATCC 33030] gi|300533714|gb|EFK54773.1| GTPase EngC [Corynebacterium genitalium ATCC 33030] Length=382 Score = 382 bits (980), Expect = 6e-104, Method: Compositional matrix adjust. Identities = 198/321 (62%), Positives = 237/321 (74%), Gaps = 17/321 (5%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPD--RRITAMRAR 63 YDESDV+VR G+ SRPRTK RP+H DA +VVS DRGRWG VL P+ R+ MRAR Sbjct 12 YDESDVRVRPGKGSRPRTKDRPKHEDAVVGLVVSKDRGRWGVVLEEGPEAGTRVVCMRAR 71 Query 64 ELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQL 123 ELGRT I VGD V VVGD SG+ DTLARIV+R R + LRRTADDTDP ER+VVANA+ L Sbjct 72 ELGRTSIEVGDRVGVVGDTSGQKDTLARIVKRQERTSELRRTADDTDPYERIVVANAEIL 131 Query 124 LIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAG 183 LIV A+ADPPPRTG V+RALIAA+ GG+TP++CLTK+DL F ++ DL + V G Sbjct 132 LIVCAVADPPPRTGFVERALIAAFVGGVTPVVCLTKSDLDDPGEFERELRDLNVDVLRTG 191 Query 184 VDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVA 243 ++D L + L+ G+++ L+GHSGVGKSTLVNRLVP+A+R GEV+ +G+GRHTST+SVA Sbjct 192 IEDDLAHLRSLIDGRLSALIGHSGVGKSTLVNRLVPDANRETGEVSGVGKGRHTSTQSVA 251 Query 244 LPL---GDT------------LSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRE 288 L L GDT GW+IDTPGIRSFGLAH+ PD+V+ F DLAEAT Sbjct 252 LELPADGDTAQDGATEVESGGFESGGWIIDTPGIRSFGLAHVSPDDVIATFPDLAEATEA 311 Query 289 CPRGCGHMGPPADPECALDTL 309 CPRGC HMGPPADPECA D L Sbjct 312 CPRGCTHMGPPADPECAWDQL 332 >gi|237786060|ref|YP_002906765.1| hypothetical protein ckrop_1493 [Corynebacterium kroppenstedtii DSM 44385] gi|237758972|gb|ACR18222.1| hypothetical protein ckrop_1493 [Corynebacterium kroppenstedtii DSM 44385] Length=384 Score = 382 bits (980), Expect = 6e-104, Method: Compositional matrix adjust. Identities = 211/362 (59%), Positives = 253/362 (70%), Gaps = 39/362 (10%) Query 5 DYDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPD--RRITAMRA 62 D+DESDV +R G+ SRPRTK RP H +A+ MV++ DRGRWG VL +PD R + MRA Sbjct 10 DWDESDVHIRPGKGSRPRTKDRPSHKNAQWGMVITKDRGRWGVVLDDKPDDARTVVCMRA 69 Query 63 RELGRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQ 122 RELGRT IVVGD V VVGD SG P TLARIV+ A RR++LRRTADD DP ER+VVANADQ Sbjct 70 RELGRTAIVVGDRVGVVGDTSGNPGTLARIVKLADRRSILRRTADDNDPYERIVVANADQ 129 Query 123 LLIVVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAA 182 LLIV ++ADPPPR G V+RAL+AA+AGG++PILCLTK+DL PF +F DL++ + A Sbjct 130 LLIVSSVADPPPRAGFVERALVAAFAGGISPILCLTKSDLTDPAPFAHEFEDLDIRIVIA 189 Query 183 GVDDPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSV 242 G +D + V L G +T L+GHSGVGKSTLVNRLVP+ADRA GEV+ IG+G+HTST+SV Sbjct 190 GQEDDITDVRRLTRGHVTALIGHSGVGKSTLVNRLVPDADRATGEVSGIGKGKHTSTQSV 249 Query 243 A--LPLGDTL-----------------------------------SGSGWVIDTPGIRSF 265 A LP G +L S +GW+IDTPGIRSF Sbjct 250 ALRLPTGASLEDNTSPDTSDGEPPNDEPPHDEPPRDTAHATADEPSDAGWIIDTPGIRSF 309 Query 266 GLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECALDTLSGPAARRAAAARRLLA 325 GLAH+ PD V+ AF DLAE +CPRGC HMGPPADPECALDT +G ARR A R +L Sbjct 310 GLAHVDPDTVIAAFEDLAELITDCPRGCTHMGPPADPECALDTATGATARRVHAIRSVLE 369 Query 326 VL 327 L Sbjct 370 AL 371 >gi|38233312|ref|NP_939079.1| hypothetical protein DIP0705 [Corynebacterium diphtheriae NCTC 13129] gi|38199571|emb|CAE49222.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length=335 Score = 381 bits (978), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 195/324 (61%), Positives = 234/324 (73%), Gaps = 7/324 (2%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 +DESDV+VR + SRPRTK RP+H +AE MVV+ DRGRWG VL G+ D + MRARE+ Sbjct 10 WDESDVRVRPSKGSRPRTKDRPKHDNAEFGMVVTKDRGRWGVVLDGQ-DTPVVCMRAREM 68 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 GRTP+ VGD V +VGD SGRP +LARIV+ A R +VLRRTADDTDP ER+VVANA QLLI Sbjct 69 GRTPVEVGDRVGIVGDTSGRPGSLARIVKLAERSSVLRRTADDTDPYERIVVANAQQLLI 128 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 V A+ADP PR G V+RAL+AA+ G L P++CLTK+DLA F +FA L + V GV+ Sbjct 129 VCAVADPAPRAGFVERALVAAFVGNLQPVICLTKSDLADPTEFASEFAALNVPVVVCGVE 188 Query 186 DPLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSVALP 245 DPL + G I+ +GHSGVGKSTLVNRLVP A R GEV+ +G+GRHTST++VAL Sbjct 189 DPLEPLQKFTHGAISATIGHSGVGKSTLVNRLVPSAARETGEVSGVGKGRHTSTQAVALQ 248 Query 246 LGDTLSGSGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPADPECA 305 L + GW+IDTPGIRSFGLAH+ D V+ F DL EA +CPRGC HMG PADPEC Sbjct 249 LPE----GGWIIDTPGIRSFGLAHVDADTVIGVFEDLHEAVEQCPRGCTHMGRPADPECV 304 Query 306 LDTLSG--PAARRAAAARRLLAVL 327 LDT P RR A R+LL L Sbjct 305 LDTFDADSPTGRRVVAVRKLLGAL 328 >gi|213965020|ref|ZP_03393219.1| GTPase EngC [Corynebacterium amycolatum SK46] gi|213952556|gb|EEB63939.1| GTPase EngC [Corynebacterium amycolatum SK46] Length=348 Score = 380 bits (977), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 208/327 (64%), Positives = 251/327 (77%), Gaps = 6/327 (1%) Query 6 YDESDVKVRSGRSSRPRTKTRPEHADAEAAMVVSVDRGRWGCVLGGRPDRRITAMRAREL 65 +DESDV++R G+ SRPRTK RP HADA+ MVV+ DRGRWG VL PD +T MRAREL Sbjct 10 WDESDVRIRPGKGSRPRTKDRPSHADAQWGMVVTKDRGRWGVVLDNTPDIAVTCMRAREL 69 Query 66 GRTPIVVGDDVDVVGDLSGRPDTLARIVRRAPRRTVLRRTADDTDPTERVVVANADQLLI 125 GRT IVVGD V VVGD+SGR TLARIV+ A R TVLRRTADD DP ER+VVANA LLI Sbjct 70 GRTNIVVGDRVGVVGDVSGREGTLARIVKLAERSTVLRRTADDNDPYERIVVANAGLLLI 129 Query 126 VVALADPPPRTGLVDRALIAAYAGGLTPILCLTKTDLAPAEPFGKQFADLELTVTAAGVD 185 V A+ADP PRTG V+RAL+AAYAGG+ P+LCLTK+DLA + F +F+ L + V G++ Sbjct 130 VCAVADPEPRTGFVERALVAAYAGGVRPVLCLTKSDLADPQEFAGEFSALGVDVVVCGIN 189 Query 186 D---PLLAVADLLAGKITVLLGHSGVGKSTLVNRLVPEADRAVGEVTEIGRGRHTSTRSV 242 D PLL + D + G++T L+GHSGVGKSTLVNR+VPEA+R GEV+ +G+GRHTST+SV Sbjct 190 DDLAPLLELID-VPGRVTALVGHSGVGKSTLVNRIVPEANRETGEVSGVGKGRHTSTQSV 248 Query 243 ALPLGDTLSG--SGWVIDTPGIRSFGLAHIQPDNVLLAFSDLAEATRECPRGCGHMGPPA 300 AL L +G + W+IDTPGIRSFGLAH+ P+ +L AF D+ AT ECPRGC H+GPPA Sbjct 249 ALMLPSESAGDATSWIIDTPGIRSFGLAHVTPETLLAAFPDIQAATDECPRGCTHLGPPA 308 Query 301 DPECALDTLSGPAARRAAAARRLLAVL 327 DPECALD L G RRA A RRLL+ + Sbjct 309 DPECALDKLEGVQHRRAMAVRRLLSAI 335 Lambda K H 0.319 0.137 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 586667724920 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40