BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3232c
Length=295
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610368|ref|NP_217749.1| transcriptional regulatory protein ... 606 1e-171
gi|340628212|ref|YP_004746664.1| putative transcriptional regula... 599 1e-169
gi|254552336|ref|ZP_05142783.1| transcriptional regulator pvdS [... 593 1e-167
gi|342861433|ref|ZP_08718080.1| PvdS [Mycobacterium colombiense ... 503 1e-140
gi|254776632|ref|ZP_05218148.1| PvdS [Mycobacterium avium subsp.... 503 2e-140
gi|336459559|gb|EGO38495.1| polyphosphate kinase 2, PA0141 famil... 502 3e-140
gi|118466404|ref|YP_883340.1| polyphosphate kinase 2 [Mycobacter... 500 8e-140
gi|296168979|ref|ZP_06850645.1| polyphosphate kinase 2 [Mycobact... 499 2e-139
gi|240170364|ref|ZP_04749023.1| putative transcriptional regulat... 498 6e-139
gi|41409444|ref|NP_962280.1| PvdS [Mycobacterium avium subsp. pa... 496 2e-138
gi|183981334|ref|YP_001849625.1| transcriptional regulatory prot... 488 4e-136
gi|118618049|ref|YP_906381.1| transcriptional regulatory protein... 488 5e-136
gi|262202687|ref|YP_003273895.1| hypothetical protein Gbro_2784 ... 459 2e-127
gi|145225279|ref|YP_001135957.1| hypothetical protein Mflv_4701 ... 453 2e-125
gi|315445577|ref|YP_004078456.1| hypothetical protein Mspyr1_403... 453 2e-125
gi|343928456|ref|ZP_08767904.1| polyphosphate kinase 2 [Gordonia... 453 2e-125
gi|332669766|ref|YP_004452774.1| hypothetical protein Celf_1252 ... 451 5e-125
gi|326384705|ref|ZP_08206382.1| hypothetical protein SCNU_17275 ... 446 2e-123
gi|336320142|ref|YP_004600110.1| hypothetical protein Celgi_1023... 444 6e-123
gi|336120661|ref|YP_004575447.1| polyphosphate kinase 2 [Microlu... 442 3e-122
gi|119717008|ref|YP_923973.1| hypothetical protein Noca_2784 [No... 405 4e-111
gi|333991608|ref|YP_004524222.1| transcriptional regulator [Myco... 399 4e-109
gi|254381593|ref|ZP_04996957.1| regulatory protein [Streptomyces... 394 1e-107
gi|269794813|ref|YP_003314268.1| hypothetical protein Sked_14980... 394 1e-107
gi|290955015|ref|YP_003486197.1| regulator [Streptomyces scabiei... 387 1e-105
gi|302549196|ref|ZP_07301538.1| regulatory protein [Streptomyces... 385 3e-105
gi|311894849|dbj|BAJ27257.1| putative regulatory protein [Kitasa... 382 3e-104
gi|333921156|ref|YP_004494737.1| hypothetical protein AS9A_3497 ... 382 3e-104
gi|297198128|ref|ZP_06915525.1| regulatory protein [Streptomyces... 382 3e-104
gi|29827815|ref|NP_822449.1| regulatory protein [Streptomyces av... 378 5e-103
gi|331696455|ref|YP_004332694.1| polyphosphate kinase 2 [Pseudon... 378 6e-103
gi|340360267|ref|ZP_08682737.1| polyphosphate kinase 2 [Actinomy... 377 9e-103
gi|297154769|gb|ADI04481.1| regulatory protein [Streptomyces bin... 376 2e-102
gi|255325406|ref|ZP_05366510.1| polyphosphate kinase 2 [Coryneba... 374 1e-101
gi|311740788|ref|ZP_07714615.1| polyphosphate kinase 2 [Coryneba... 371 7e-101
gi|258651931|ref|YP_003201087.1| hypothetical protein Namu_1708 ... 370 2e-100
gi|38233479|ref|NP_939246.1| putative RNA polymerase sigma facto... 369 2e-100
gi|227875826|ref|ZP_03993952.1| polyphosphate kinase 2 [Mobilunc... 369 4e-100
gi|306819107|ref|ZP_07452821.1| PPK2 family polyphosphate:nucleo... 369 4e-100
gi|269977461|ref|ZP_06184433.1| polyphosphate kinase 2 [Mobilunc... 368 5e-100
gi|336326191|ref|YP_004606157.1| polyphosphate kinase [Corynebac... 367 1e-99
gi|225023029|ref|ZP_03712221.1| hypothetical protein CORMATOL_03... 367 1e-99
gi|227832716|ref|YP_002834423.1| putative polyphosphate kinase [... 367 2e-99
gi|305682018|ref|ZP_07404822.1| polyphosphate kinase 2 [Coryneba... 366 2e-99
gi|326771901|ref|ZP_08231186.1| polyphosphate kinase 2 [Actinomy... 365 5e-99
gi|300858103|ref|YP_003783086.1| hypothetical protein cpfrc_0068... 364 8e-99
gi|68536590|ref|YP_251295.1| hypothetical protein jk1504 [Coryne... 364 8e-99
gi|325066916|ref|ZP_08125589.1| hypothetical protein AoriK_03811... 364 9e-99
gi|260577733|ref|ZP_05845668.1| polyphosphate kinase 2 [Coryneba... 364 9e-99
gi|319947779|ref|ZP_08021978.1| hypothetical protein ES5_00642 [... 364 1e-98
>gi|15610368|ref|NP_217749.1| transcriptional regulatory protein PvdS [Mycobacterium tuberculosis
H37Rv]
gi|15842821|ref|NP_337858.1| RNA polymerase sigma factor, putative [Mycobacterium tuberculosis
CDC1551]
gi|31794413|ref|NP_856906.1| transcriptional regulatory protein PvdS [Mycobacterium bovis
AF2122/97]
76 more sequence titles
Length=295
Score = 606 bits (1563), Expect = 1e-171, Method: Compositional matrix adjust.
Identities = 294/295 (99%), Positives = 295/295 (100%), Gaps = 0/295 (0%)
Query 1 VDIPSVDVSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSG 60
+DIPSVDVSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSG
Sbjct 1 MDIPSVDVSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSG 60
Query 61 ARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKG 120
ARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKG
Sbjct 61 ARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKG 120
Query 121 EIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQ 180
EIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQ
Sbjct 121 EIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQ 180
Query 181 LRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHA 240
LRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHA
Sbjct 181 LRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHA 240
Query 241 RLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIAR 295
RLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIAR
Sbjct 241 RLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIAR 295
>gi|340628212|ref|YP_004746664.1| putative transcriptional regulatory protein [Mycobacterium canettii
CIPT 140010059]
gi|340006402|emb|CCC45582.1| putative transcriptional regulatory protein PVDS (putative RNA
polymerase sigma factor) [Mycobacterium canettii CIPT 140010059]
Length=295
Score = 599 bits (1545), Expect = 1e-169, Method: Compositional matrix adjust.
Identities = 291/295 (99%), Positives = 292/295 (99%), Gaps = 0/295 (0%)
Query 1 VDIPSVDVSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSG 60
+DIPSVDVSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSG
Sbjct 1 MDIPSVDVSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSG 60
Query 61 ARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKG 120
ARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKG
Sbjct 61 ARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKG 120
Query 121 EIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQ 180
EIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQ
Sbjct 121 EIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQ 180
Query 181 LRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHA 240
LRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHA
Sbjct 181 LRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHA 240
Query 241 RLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIAR 295
RLNMMAHLLSTIDY DVEKPKVKLP RPLVSGNYRRPPRELST VDDYVATLIAR
Sbjct 241 RLNMMAHLLSTIDYTDVEKPKVKLPTRPLVSGNYRRPPRELSTCVDDYVATLIAR 295
>gi|254552336|ref|ZP_05142783.1| transcriptional regulator pvdS [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|294993828|ref|ZP_06799519.1| transcriptional regulator pvdS [Mycobacterium tuberculosis 210]
gi|297635885|ref|ZP_06953665.1| transcriptional regulator pvdS [Mycobacterium tuberculosis KZN
4207]
Length=288
Score = 593 bits (1528), Expect = 1e-167, Method: Compositional matrix adjust.
Identities = 287/288 (99%), Positives = 288/288 (100%), Gaps = 0/288 (0%)
Query 8 VSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIF 67
+STATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIF
Sbjct 1 MSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIF 60
Query 68 EGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDR 127
EGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDR
Sbjct 61 EGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDR 120
Query 128 SWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKAR 187
SWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKAR
Sbjct 121 SWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKAR 180
Query 188 RNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAH 247
RNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAH
Sbjct 181 RNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAH 240
Query 248 LLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIAR 295
LLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIAR
Sbjct 241 LLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIAR 288
>gi|342861433|ref|ZP_08718080.1| PvdS [Mycobacterium colombiense CECT 3035]
gi|342130922|gb|EGT84211.1| PvdS [Mycobacterium colombiense CECT 3035]
Length=293
Score = 503 bits (1295), Expect = 1e-140, Method: Compositional matrix adjust.
Identities = 240/288 (84%), Positives = 257/288 (90%), Gaps = 0/288 (0%)
Query 6 VDVSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVV 65
V VSTA D A ++A +SA +ISD VY+AELFRLQTE VKLQEW R SG RLVV
Sbjct 6 VAVSTAKTDRAPAKATKKKSAGSAGPRISDEVYEAELFRLQTELVKLQEWVRQSGTRLVV 65
Query 66 IFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLF 125
+FEGRD AGKGGAIKRITEYL+PR+A IAALP P+DRERGQWYYQRYIAHLP KGEIVLF
Sbjct 66 LFEGRDAAGKGGAIKRITEYLSPRIAHIAALPVPSDRERGQWYYQRYIAHLPTKGEIVLF 125
Query 126 DRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFK 185
DRSWYNRAG+EKVMGFCTPQEY F+RQTPIFEQMLIDDGILLRKYWFSVS+AEQLRRFK
Sbjct 126 DRSWYNRAGIEKVMGFCTPQEYARFMRQTPIFEQMLIDDGILLRKYWFSVSEAEQLRRFK 185
Query 186 ARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMM 245
ARRNDPVR+WKLSP+DLESVYRWEDYSRAKDEMMVHTDTP SPWYVVESDIKKHARLNMM
Sbjct 186 ARRNDPVRRWKLSPIDLESVYRWEDYSRAKDEMMVHTDTPESPWYVVESDIKKHARLNMM 245
Query 246 AHLLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLI 293
AHLLS++ Y DVE PKVKLP P+VSGNYRRPPRELSTYVDDY ATLI
Sbjct 246 AHLLSSVPYHDVETPKVKLPAHPVVSGNYRRPPRELSTYVDDYAATLI 293
>gi|254776632|ref|ZP_05218148.1| PvdS [Mycobacterium avium subsp. avium ATCC 25291]
Length=292
Score = 503 bits (1294), Expect = 2e-140, Method: Compositional matrix adjust.
Identities = 244/288 (85%), Positives = 260/288 (91%), Gaps = 1/288 (0%)
Query 6 VDVSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVV 65
V VS+A NDG +A G + +A KI DAVY+AELFRLQTE VKLQEW RHSGARLVV
Sbjct 6 VAVSSAKNDGVPLKA-GKKKSARAAVKIPDAVYEAELFRLQTELVKLQEWVRHSGARLVV 64
Query 66 IFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLF 125
+FEGRD AGKGGAIKRITEYL+PRVAR+AALP PTDRERGQWYYQRYIAHLP+KGEIVLF
Sbjct 65 VFEGRDAAGKGGAIKRITEYLSPRVARVAALPVPTDRERGQWYYQRYIAHLPSKGEIVLF 124
Query 126 DRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFK 185
DRSWYNRAG+EKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVS+AEQLRRFK
Sbjct 125 DRSWYNRAGIEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSEAEQLRRFK 184
Query 186 ARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMM 245
AR DPVR+WKLSP+DLESVYRWEDYSRAKDEMMVHTDTP SPWYVVESDIKKHARLNMM
Sbjct 185 ARLKDPVRRWKLSPIDLESVYRWEDYSRAKDEMMVHTDTPESPWYVVESDIKKHARLNMM 244
Query 246 AHLLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLI 293
AHLLSTI Y VE P VKLP RP+V+GNY+RPPRELS YVDDY ATLI
Sbjct 245 AHLLSTIPYHAVEAPPVKLPRRPVVTGNYQRPPRELSRYVDDYAATLI 292
>gi|336459559|gb|EGO38495.1| polyphosphate kinase 2, PA0141 family [Mycobacterium avium subsp.
paratuberculosis S397]
Length=287
Score = 502 bits (1293), Expect = 3e-140, Method: Compositional matrix adjust.
Identities = 243/286 (85%), Positives = 259/286 (91%), Gaps = 1/286 (0%)
Query 8 VSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIF 67
VS+A NDG +A G + +A KI DAVY+AELFRLQTE VKLQEW RHSGARLVV+F
Sbjct 3 VSSAKNDGVPLKA-GKKKSARAAVKIPDAVYEAELFRLQTELVKLQEWVRHSGARLVVVF 61
Query 68 EGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDR 127
EGRD AGKGGAIKRITEYL+PRVAR+AALP PTDRERGQWYYQRYIAHLP+KGEIVLFDR
Sbjct 62 EGRDAAGKGGAIKRITEYLSPRVARVAALPVPTDRERGQWYYQRYIAHLPSKGEIVLFDR 121
Query 128 SWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKAR 187
SWYNRAG+EKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVS+AEQLRRFKAR
Sbjct 122 SWYNRAGIEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSEAEQLRRFKAR 181
Query 188 RNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAH 247
DPVR+WKLSP+DLESVYRWEDYSRAKDEMMVHTDTP SPWYVVESDIKKHARLNMMAH
Sbjct 182 LKDPVRRWKLSPIDLESVYRWEDYSRAKDEMMVHTDTPESPWYVVESDIKKHARLNMMAH 241
Query 248 LLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLI 293
LLSTI Y VE P VKLP RP+V+GNY+RPPRELS YVDDY ATLI
Sbjct 242 LLSTIPYHAVEAPPVKLPRRPVVTGNYQRPPRELSRYVDDYAATLI 287
>gi|118466404|ref|YP_883340.1| polyphosphate kinase 2 [Mycobacterium avium 104]
gi|118167691|gb|ABK68588.1| Polyphosphate kinase 2 [Mycobacterium avium 104]
Length=285
Score = 500 bits (1288), Expect = 8e-140, Method: Compositional matrix adjust.
Identities = 242/286 (85%), Positives = 259/286 (91%), Gaps = 1/286 (0%)
Query 8 VSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIF 67
+S+A NDG +A G + +A KI DAVY+AELFRLQTE VKLQEW RHSGARLVV+F
Sbjct 1 MSSAKNDGVPLKA-GKKKSARAAVKIPDAVYEAELFRLQTELVKLQEWVRHSGARLVVVF 59
Query 68 EGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDR 127
EGRD AGKGGAIKRITEYL+PRVAR+AALP PTDRERGQWYYQRYIAHLP+KGEIVLFDR
Sbjct 60 EGRDAAGKGGAIKRITEYLSPRVARVAALPVPTDRERGQWYYQRYIAHLPSKGEIVLFDR 119
Query 128 SWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKAR 187
SWYNRAG+EKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVS+AEQLRRFKAR
Sbjct 120 SWYNRAGIEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSEAEQLRRFKAR 179
Query 188 RNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAH 247
DPVR+WKLSP+DLESVYRWEDYSRAKDEMMVHTDTP SPWYVVESDIKKHARLNMMAH
Sbjct 180 LKDPVRRWKLSPIDLESVYRWEDYSRAKDEMMVHTDTPESPWYVVESDIKKHARLNMMAH 239
Query 248 LLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLI 293
LLSTI Y VE P VKLP RP+V+GNY+RPPRELS YVDDY ATLI
Sbjct 240 LLSTIPYHAVEAPPVKLPRRPVVTGNYQRPPRELSRYVDDYAATLI 285
>gi|296168979|ref|ZP_06850645.1| polyphosphate kinase 2 [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896321|gb|EFG75977.1| polyphosphate kinase 2 [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=286
Score = 499 bits (1285), Expect = 2e-139, Method: Compositional matrix adjust.
Identities = 239/287 (84%), Positives = 259/287 (91%), Gaps = 2/287 (0%)
Query 8 VSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIF 67
+S AT DG S AK H +P RK+ DAVY+AELFRLQTEFV LQEW RH+GAR+VVIF
Sbjct 1 MSIATKDGES--AKAHTKKSPPVRKVPDAVYRAELFRLQTEFVTLQEWVRHTGARVVVIF 58
Query 68 EGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDR 127
EGRDGAGKGG IKRITEYLNPR RIAALPAPT+RERGQWYYQRYIAHLPAKGEIVLFDR
Sbjct 59 EGRDGAGKGGTIKRITEYLNPRAVRIAALPAPTERERGQWYYQRYIAHLPAKGEIVLFDR 118
Query 128 SWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKAR 187
SWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQ+LID+GILLRKYWFSVS+AEQLRRF+AR
Sbjct 119 SWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQLLIDEGILLRKYWFSVSEAEQLRRFRAR 178
Query 188 RNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAH 247
NDPVRQWKLS MDL+SVYRWE+YSRAKDEMMVHTDT SPWYVVESDIKKHARLNMMAH
Sbjct 179 LNDPVRQWKLSTMDLQSVYRWEEYSRAKDEMMVHTDTSFSPWYVVESDIKKHARLNMMAH 238
Query 248 LLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIA 294
LLSTIDY DVE+PK+KLP PL + +Y+RPPR+L+TYVDDY ATLI
Sbjct 239 LLSTIDYHDVERPKIKLPKLPLPAVSYQRPPRDLATYVDDYAATLIG 285
>gi|240170364|ref|ZP_04749023.1| putative transcriptional regulatory protein [Mycobacterium kansasii
ATCC 12478]
Length=290
Score = 498 bits (1281), Expect = 6e-139, Method: Compositional matrix adjust.
Identities = 237/261 (91%), Positives = 245/261 (94%), Gaps = 0/261 (0%)
Query 33 ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVAR 92
I VY AELFRLQTEFVKLQEW RHSGARLVV+FEGRDGAGKGG IKRITEYLNPRVAR
Sbjct 28 IPANVYHAELFRLQTEFVKLQEWVRHSGARLVVVFEGRDGAGKGGTIKRITEYLNPRVAR 87
Query 93 IAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLR 152
IAALP+PTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQE+ LFLR
Sbjct 88 IAALPSPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEHALFLR 147
Query 153 QTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYS 212
QTPIFE MLIDDGILLRKYWFSVSD EQLRRFKARR+DPVRQWKLSPMDLES+YRWEDYS
Sbjct 148 QTPIFEHMLIDDGILLRKYWFSVSDEEQLRRFKARRSDPVRQWKLSPMDLESLYRWEDYS 207
Query 213 RAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSG 272
RAKD+MMVHTD P SPWYVVESDIKKHARLNMMAHLLSTIDY DVEKPKVKLP PLVSG
Sbjct 208 RAKDQMMVHTDIPTSPWYVVESDIKKHARLNMMAHLLSTIDYRDVEKPKVKLPRHPLVSG 267
Query 273 NYRRPPRELSTYVDDYVATLI 293
NY+RPPRELS YV+DY ATLI
Sbjct 268 NYQRPPRELSNYVEDYAATLI 288
>gi|41409444|ref|NP_962280.1| PvdS [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41398275|gb|AAS05896.1| PvdS [Mycobacterium avium subsp. paratuberculosis K-10]
Length=292
Score = 496 bits (1277), Expect = 2e-138, Method: Compositional matrix adjust.
Identities = 242/288 (85%), Positives = 258/288 (90%), Gaps = 1/288 (0%)
Query 6 VDVSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVV 65
V VS+A NDG +A G + +A KI DAVY+AELFRLQTE VKLQEW RHSGARLVV
Sbjct 6 VAVSSAKNDGVPLKA-GKKKSARAAVKIPDAVYEAELFRLQTELVKLQEWVRHSGARLVV 64
Query 66 IFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLF 125
+FEGRD AGKGGAIKRITE L+PRVAR+AALP PTDRERGQWYYQRYIAHLP+KGEIVLF
Sbjct 65 VFEGRDAAGKGGAIKRITENLSPRVARVAALPVPTDRERGQWYYQRYIAHLPSKGEIVLF 124
Query 126 DRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFK 185
DRSW NRAG+EKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVS+AEQLRRFK
Sbjct 125 DRSWDNRAGIEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSEAEQLRRFK 184
Query 186 ARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMM 245
AR DPVR+WKLSP+DLESVYRWEDYSRAKDEMMVHTDTP SPWYVVESDIKKHARLNMM
Sbjct 185 ARLKDPVRRWKLSPIDLESVYRWEDYSRAKDEMMVHTDTPESPWYVVESDIKKHARLNMM 244
Query 246 AHLLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLI 293
AHLLSTI Y VE P VKLP RP+V+GNY+RPPRELS YVDDY ATLI
Sbjct 245 AHLLSTIPYHAVEAPPVKLPRRPVVTGNYQRPPRELSRYVDDYAATLI 292
>gi|183981334|ref|YP_001849625.1| transcriptional regulatory protein PvdS [Mycobacterium marinum
M]
gi|183174660|gb|ACC39770.1| transcriptional regulatory protein PvdS [Mycobacterium marinum
M]
Length=290
Score = 488 bits (1257), Expect = 4e-136, Method: Compositional matrix adjust.
Identities = 240/290 (83%), Positives = 261/290 (90%), Gaps = 2/290 (0%)
Query 8 VSTATNDGASSRAKGHRSAAPG--RRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVV 65
+STATNDGA ++AK + + G R KIS +VY+AELFRLQTEFV+LQEW RH+GAR+VV
Sbjct 1 MSTATNDGAPAKAKKKKKKSAGAGRHKISKSVYEAELFRLQTEFVRLQEWVRHAGARVVV 60
Query 66 IFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLF 125
IFEGRD AGKGGAIKRITEYL+PR A +AALP P DRERGQWYYQRYIAHLPAKGEIV F
Sbjct 61 IFEGRDAAGKGGAIKRITEYLSPRHAYVAALPVPNDRERGQWYYQRYIAHLPAKGEIVFF 120
Query 126 DRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFK 185
DRSWYNRAG+EKVMGFCTPQE+ LFLRQTPIFEQMLIDDGILLRKYWFSVSD EQL RFK
Sbjct 121 DRSWYNRAGIEKVMGFCTPQEHALFLRQTPIFEQMLIDDGILLRKYWFSVSDEEQLHRFK 180
Query 186 ARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMM 245
AR+ DPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMM
Sbjct 181 ARQTDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMM 240
Query 246 AHLLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIAR 295
AHLLSTIDY VE PKV LP +P+V+GNY+RPPRELS YV+DY +TLI R
Sbjct 241 AHLLSTIDYRPVEMPKVNLPDQPIVTGNYKRPPRELSKYVEDYASTLIGR 290
>gi|118618049|ref|YP_906381.1| transcriptional regulatory protein PvdS [Mycobacterium ulcerans
Agy99]
gi|118570159|gb|ABL04910.1| transcriptional regulatory protein PvdS [Mycobacterium ulcerans
Agy99]
Length=290
Score = 488 bits (1256), Expect = 5e-136, Method: Compositional matrix adjust.
Identities = 240/290 (83%), Positives = 260/290 (90%), Gaps = 2/290 (0%)
Query 8 VSTATNDGASSRAKGHRSAAPG--RRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVV 65
+STATNDGA ++AK + + G R KIS VY+AELFRLQTEFV+LQEW RH+GAR+VV
Sbjct 1 MSTATNDGAPAKAKKKKKKSAGAGRHKISKGVYEAELFRLQTEFVRLQEWVRHAGARVVV 60
Query 66 IFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLF 125
IFEGRD AGKGGAIKRITEYL+PR A +AALP P DRERGQWYYQRYIAHLPAKGEIV F
Sbjct 61 IFEGRDAAGKGGAIKRITEYLSPRHAYVAALPVPNDRERGQWYYQRYIAHLPAKGEIVFF 120
Query 126 DRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFK 185
DRSWYNRAG+EKVMGFCTPQE+ LFLRQTPIFEQMLIDDGILLRKYWFSVSD EQL RFK
Sbjct 121 DRSWYNRAGIEKVMGFCTPQEHALFLRQTPIFEQMLIDDGILLRKYWFSVSDEEQLHRFK 180
Query 186 ARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMM 245
AR+ DPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMM
Sbjct 181 ARQTDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMM 240
Query 246 AHLLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIAR 295
AHLLSTIDY VE PKV LP +P+V+GNY+RPPRELS YV+DY +TLI R
Sbjct 241 AHLLSTIDYRPVEMPKVNLPDQPIVTGNYKRPPRELSKYVEDYASTLIGR 290
>gi|262202687|ref|YP_003273895.1| hypothetical protein Gbro_2784 [Gordonia bronchialis DSM 43247]
gi|262086034|gb|ACY22002.1| protein of unknown function DUF344 [Gordonia bronchialis DSM
43247]
Length=276
Score = 459 bits (1182), Expect = 2e-127, Method: Compositional matrix adjust.
Identities = 215/275 (79%), Positives = 243/275 (89%), Gaps = 3/275 (1%)
Query 20 AKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAI 79
AK +S P KIS+ +Y+AELFRLQTE VK+QEW R +G R+VV+FEGRD AGKGG I
Sbjct 2 AKKGKSKQP---KISNKIYEAELFRLQTELVKMQEWVRETGTRVVVVFEGRDAAGKGGTI 58
Query 80 KRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVM 139
KRITEYL+PR+AR+AALPAPTDRERGQWYYQRY+AHLPA GEIVLFDRSWYNRAGVEKVM
Sbjct 59 KRITEYLSPRIARVAALPAPTDRERGQWYYQRYVAHLPAPGEIVLFDRSWYNRAGVEKVM 118
Query 140 GFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSP 199
GFCTP+E+ FLRQTPIFEQMLIDDGILLRKYWFSVSD EQLRRF++R +DPVRQWKLSP
Sbjct 119 GFCTPEEHTRFLRQTPIFEQMLIDDGILLRKYWFSVSDEEQLRRFRSRMSDPVRQWKLSP 178
Query 200 MDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEK 259
MDLESV+RWEDYSRAKDEMMVHTDT +SPWYVVESD+KKHARLNM++HLLSTIDY +V +
Sbjct 179 MDLESVFRWEDYSRAKDEMMVHTDTAMSPWYVVESDVKKHARLNMISHLLSTIDYHEVPR 238
Query 260 PKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIA 294
P+V LP P+ SGNY RPPR LS YV D+VA L+
Sbjct 239 PEVSLPKHPIESGNYHRPPRSLSKYVPDHVAELLG 273
>gi|145225279|ref|YP_001135957.1| hypothetical protein Mflv_4701 [Mycobacterium gilvum PYR-GCK]
gi|145217765|gb|ABP47169.1| protein of unknown function DUF344 [Mycobacterium gilvum PYR-GCK]
Length=285
Score = 453 bits (1165), Expect = 2e-125, Method: Compositional matrix adjust.
Identities = 211/258 (82%), Positives = 234/258 (91%), Gaps = 0/258 (0%)
Query 37 VYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAAL 96
VY+AELFRLQTE VKLQEW R +GAR+VV+FEGRD AGKGGAIKR+TEYL+PRVA IAAL
Sbjct 25 VYEAELFRLQTELVKLQEWVRATGARVVVVFEGRDAAGKGGAIKRVTEYLSPRVATIAAL 84
Query 97 PAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPI 156
PAPT+RERGQWY+QRYI HLP GEIVLFDRSWYNRAGVEKVMGFCTP E+ LFLRQ PI
Sbjct 85 PAPTERERGQWYFQRYIQHLPTSGEIVLFDRSWYNRAGVEKVMGFCTPAEHALFLRQAPI 144
Query 157 FEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKD 216
FEQMLI+DGI+LRKYWFSVS EQLRRFK+R +DPVR+WKLSPMDLESVYRWEDYSRAKD
Sbjct 145 FEQMLIEDGIILRKYWFSVSGEEQLRRFKSRHSDPVRRWKLSPMDLESVYRWEDYSRAKD 204
Query 217 EMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNYRR 276
EMM HTDTP+SPWYVVESDIKKHARLNM+AHLLSTIDY DVE PKV LP + + S +Y+R
Sbjct 205 EMMAHTDTPLSPWYVVESDIKKHARLNMIAHLLSTIDYYDVEAPKVTLPKKVVCSADYQR 264
Query 277 PPRELSTYVDDYVATLIA 294
PPRE STYVDD+VA+L+
Sbjct 265 PPREASTYVDDHVASLMG 282
>gi|315445577|ref|YP_004078456.1| hypothetical protein Mspyr1_40340 [Mycobacterium sp. Spyr1]
gi|315263880|gb|ADU00622.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=291
Score = 453 bits (1165), Expect = 2e-125, Method: Compositional matrix adjust.
Identities = 211/258 (82%), Positives = 234/258 (91%), Gaps = 0/258 (0%)
Query 37 VYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAAL 96
VY+AELFRLQTE VKLQEW R +GAR+VV+FEGRD AGKGGAIKR+TEYL+PRVA IAAL
Sbjct 31 VYEAELFRLQTELVKLQEWVRATGARVVVVFEGRDAAGKGGAIKRVTEYLSPRVATIAAL 90
Query 97 PAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPI 156
PAPT+RERGQWY+QRYI HLP GEIVLFDRSWYNRAGVEKVMGFCTP E+ LFLRQ PI
Sbjct 91 PAPTERERGQWYFQRYIQHLPTSGEIVLFDRSWYNRAGVEKVMGFCTPAEHALFLRQAPI 150
Query 157 FEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKD 216
FEQMLI+DGI+LRKYWFSVS EQLRRFK+R +DPVR+WKLSPMDLESVYRWEDYSRAKD
Sbjct 151 FEQMLIEDGIILRKYWFSVSGEEQLRRFKSRHSDPVRRWKLSPMDLESVYRWEDYSRAKD 210
Query 217 EMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNYRR 276
EMM HTDTP+SPWYVVESDIKKHARLNM+AHLLSTIDY DVE PKV LP + + S +Y+R
Sbjct 211 EMMAHTDTPLSPWYVVESDIKKHARLNMIAHLLSTIDYYDVEAPKVTLPKKVVCSADYQR 270
Query 277 PPRELSTYVDDYVATLIA 294
PPRE STYVDD+VA+L+
Sbjct 271 PPREASTYVDDHVASLMG 288
>gi|343928456|ref|ZP_08767904.1| polyphosphate kinase 2 [Gordonia alkanivorans NBRC 16433]
gi|343761641|dbj|GAA14830.1| polyphosphate kinase 2 [Gordonia alkanivorans NBRC 16433]
Length=276
Score = 453 bits (1165), Expect = 2e-125, Method: Compositional matrix adjust.
Identities = 209/263 (80%), Positives = 237/263 (91%), Gaps = 0/263 (0%)
Query 31 RKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRV 90
++I + VY+AELFRLQTE VKLQEW R +GAR+VV+FEGRD AGKGG IKRIT+YL+PR+
Sbjct 10 QEIPNNVYEAELFRLQTELVKLQEWVRETGARVVVVFEGRDAAGKGGTIKRITQYLSPRI 69
Query 91 ARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLF 150
AR+AALPAPTDRERGQWYYQRY+AHLPA GEIVLFDRSWYNRAGVEKVMGFCTP+E+ F
Sbjct 70 ARVAALPAPTDRERGQWYYQRYVAHLPAPGEIVLFDRSWYNRAGVEKVMGFCTPEEHTRF 129
Query 151 LRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWED 210
LRQTPIFEQMLIDDGI+LRKYWFSVSD EQL+RF+ R DPVRQWKLSPMDLESVYRWED
Sbjct 130 LRQTPIFEQMLIDDGIILRKYWFSVSDDEQLKRFRQRMKDPVRQWKLSPMDLESVYRWED 189
Query 211 YSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLV 270
YSRAKDEMMVHTDT +SPWYVVESD+KKHARLNM++HLL I+Y +V +P+V LP +P+
Sbjct 190 YSRAKDEMMVHTDTALSPWYVVESDVKKHARLNMISHLLDNIEYGEVPRPEVTLPKKPIQ 249
Query 271 SGNYRRPPRELSTYVDDYVATLI 293
SGNY RPPR LS YV D+VATLI
Sbjct 250 SGNYHRPPRSLSKYVPDHVATLI 272
>gi|332669766|ref|YP_004452774.1| hypothetical protein Celf_1252 [Cellulomonas fimi ATCC 484]
gi|332338804|gb|AEE45387.1| protein of unknown function DUF344 [Cellulomonas fimi ATCC 484]
Length=286
Score = 451 bits (1161), Expect = 5e-125, Method: Compositional matrix adjust.
Identities = 211/277 (77%), Positives = 240/277 (87%), Gaps = 1/277 (0%)
Query 17 SSRAKGHR-SAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGK 75
+ + KG + S G+ KI D VY+AELFRLQ E VK+Q+W RH+GAR+VV+FEGRD AGK
Sbjct 2 AKKPKGDKPSKDKGKNKIPDEVYEAELFRLQAELVKVQQWVRHTGARVVVVFEGRDAAGK 61
Query 76 GGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGV 135
GG IKRITEYL+PRV RIAALP PT+RE+GQWYYQRY++HLPA GEIVLFDRSWYNRAGV
Sbjct 62 GGTIKRITEYLSPRVVRIAALPTPTEREKGQWYYQRYVSHLPAAGEIVLFDRSWYNRAGV 121
Query 136 EKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQW 195
EKVMGFCTPQEY F+RQTPIFEQML++DGILLRKYWFSVSDAEQLRRF++R NDPVRQW
Sbjct 122 EKVMGFCTPQEYTRFMRQTPIFEQMLVEDGILLRKYWFSVSDAEQLRRFRSRLNDPVRQW 181
Query 196 KLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYA 255
KLSPMDLES+ RWE+YSRAKDEM+VHTD P SPW++VESD+KKHARLNMMAHLLSTI Y
Sbjct 182 KLSPMDLESISRWEEYSRAKDEMLVHTDVPGSPWFIVESDVKKHARLNMMAHLLSTIPYT 241
Query 256 DVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATL 292
DV +V LP RP S Y+RPPRELSTYV D+VA L
Sbjct 242 DVPHEEVHLPDRPAASNGYQRPPRELSTYVPDHVAQL 278
>gi|326384705|ref|ZP_08206382.1| hypothetical protein SCNU_17275 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196513|gb|EGD53710.1| hypothetical protein SCNU_17275 [Gordonia neofelifaecis NRRL
B-59395]
Length=276
Score = 446 bits (1146), Expect = 2e-123, Method: Compositional matrix adjust.
Identities = 204/263 (78%), Positives = 238/263 (91%), Gaps = 0/263 (0%)
Query 32 KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVA 91
K+ VY++ELFRLQTE V LQEW R +GAR+VVIFEGRD AGKGGAIKRIT++L+PR+
Sbjct 10 KLPKDVYESELFRLQTELVSLQEWVRATGARVVVIFEGRDAAGKGGAIKRITQFLSPRIC 69
Query 92 RIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFL 151
R+AALPAPTDRE+GQWYYQRY+A LPA GEIVLFDRSWYNRAGVEKVMGFCTP+E+ FL
Sbjct 70 RVAALPAPTDREKGQWYYQRYVAQLPAPGEIVLFDRSWYNRAGVEKVMGFCTPEEHTRFL 129
Query 152 RQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDY 211
RQTPIFEQMLIDDGI+LRKYWFSVS+ EQLRRF+ARR+DPVRQWKLSPMDLESVYRWEDY
Sbjct 130 RQTPIFEQMLIDDGIMLRKYWFSVSNEEQLRRFRARRDDPVRQWKLSPMDLESVYRWEDY 189
Query 212 SRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVS 271
SRAKDEMMVHTDT SPW+VVESD K+HARLNM++HLLSTID+ ++E+P+VKLP +P+ S
Sbjct 190 SRAKDEMMVHTDTSNSPWFVVESDHKRHARLNMISHLLSTIDFEEIERPQVKLPKKPIES 249
Query 272 GNYRRPPRELSTYVDDYVATLIA 294
G+Y RPPR LS +V D+VA+L+
Sbjct 250 GSYHRPPRSLSKFVPDHVASLLG 272
>gi|336320142|ref|YP_004600110.1| hypothetical protein Celgi_1023 [Cellvibrio gilvus ATCC 13127]
gi|336103723|gb|AEI11542.1| protein of unknown function DUF344 [Cellvibrio gilvus ATCC 13127]
Length=333
Score = 444 bits (1143), Expect = 6e-123, Method: Compositional matrix adjust.
Identities = 207/275 (76%), Positives = 235/275 (86%), Gaps = 0/275 (0%)
Query 20 AKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAI 79
A G + A GR KISD VY+AELFRLQTE VKLQEW R +GAR+ V+FEGRD AGKGG I
Sbjct 53 AMGKKHARGGRDKISDEVYEAELFRLQTELVKLQEWTRSTGARIAVVFEGRDAAGKGGTI 112
Query 80 KRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVM 139
KRITEYL+PR RIAALP PT+RE+ QWYYQRY+A LPA GEIVLFDRSWYNRAGVE+VM
Sbjct 113 KRITEYLSPRTVRIAALPTPTEREKSQWYYQRYVAQLPAAGEIVLFDRSWYNRAGVERVM 172
Query 140 GFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSP 199
G+CTPQE+ F+RQTPIFEQML++DGILLRKYWFSVSDAEQLRRF++R +DP+RQWKLS
Sbjct 173 GYCTPQEHATFMRQTPIFEQMLVEDGILLRKYWFSVSDAEQLRRFRSRLSDPLRQWKLST 232
Query 200 MDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEK 259
DL+S+ RWEDYSRAKDEMMVHTD P SPW+VVESDIKKHARLNM++HLLSTI Y DV +
Sbjct 233 TDLQSIARWEDYSRAKDEMMVHTDIPTSPWFVVESDIKKHARLNMISHLLSTIPYVDVPR 292
Query 260 PKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIA 294
KV LP RP S Y RPPRELSTYV D+VA+L+
Sbjct 293 EKVTLPDRPAPSSGYERPPRELSTYVPDHVASLLG 327
>gi|336120661|ref|YP_004575447.1| polyphosphate kinase 2 [Microlunatus phosphovorus NM-1]
gi|334688459|dbj|BAK38044.1| polyphosphate kinase 2 [Microlunatus phosphovorus NM-1]
Length=278
Score = 442 bits (1137), Expect = 3e-122, Method: Compositional matrix adjust.
Identities = 205/264 (78%), Positives = 234/264 (89%), Gaps = 0/264 (0%)
Query 31 RKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRV 90
RKI + VY+AE+FRLQ+E VKLQEW RH+GAR+VVIFEGRD AGKGG IKR+TEYL+PRV
Sbjct 9 RKIPNDVYEAEIFRLQSELVKLQEWVRHTGARVVVIFEGRDAAGKGGTIKRVTEYLSPRV 68
Query 91 ARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLF 150
AR+AALP PT+RE+ QWY+QRYI HLPA GEIVLFDRSWYNRAGVEKVMGFCTPQ+Y LF
Sbjct 69 ARVAALPTPTEREKTQWYFQRYIQHLPAAGEIVLFDRSWYNRAGVEKVMGFCTPQQYALF 128
Query 151 LRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWED 210
+RQ P+FEQMLID+GILLRKYWFSVSD+EQLRRF++R +DPVRQWKLSPMDLES+ RWED
Sbjct 129 MRQAPLFEQMLIDEGILLRKYWFSVSDSEQLRRFRSRMSDPVRQWKLSPMDLESINRWED 188
Query 211 YSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLV 270
YSRAKDEMMVHTD PVSPW+VVESDIKKHARLNM++HLLSTI Y DV KV LP R
Sbjct 189 YSRAKDEMMVHTDIPVSPWFVVESDIKKHARLNMISHLLSTIPYTDVPGQKVHLPKRLPA 248
Query 271 SGNYRRPPRELSTYVDDYVATLIA 294
S NY+RPPRELS YV D+V+ ++
Sbjct 249 SENYQRPPRELSHYVPDHVSQVMG 272
>gi|119717008|ref|YP_923973.1| hypothetical protein Noca_2784 [Nocardioides sp. JS614]
gi|119537669|gb|ABL82286.1| protein of unknown function DUF344 [Nocardioides sp. JS614]
Length=269
Score = 405 bits (1041), Expect = 4e-111, Method: Compositional matrix adjust.
Identities = 188/268 (71%), Positives = 226/268 (85%), Gaps = 1/268 (0%)
Query 27 APGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYL 86
A +R+++ Y+AELFRLQ E VK+QEW R +G RLV++FEGRD AGKGGAIKRIT+YL
Sbjct 2 AKSKRRLTSGQYEAELFRLQAEMVKVQEWVRAAGERLVIVFEGRDAAGKGGAIKRITQYL 61
Query 87 NPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQE 146
NPRVARI ALPAP++RERGQWY+QRY+ LP++GEIVLFDRSWYNRAGVE+VMGFCTP+E
Sbjct 62 NPRVARITALPAPSERERGQWYFQRYVEQLPSRGEIVLFDRSWYNRAGVERVMGFCTPEE 121
Query 147 YVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVY 206
Y FL Q PIFE++L++DGILLRKYWFSVSD EQ RRF+ R +DP+R+WKLS MDLES+
Sbjct 122 YRRFLHQCPIFERLLVEDGILLRKYWFSVSDEEQQRRFRDRLDDPMRRWKLSTMDLESIT 181
Query 207 RWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPP 266
RWEDYSRAKDEMMVHTD P + WYVVE D+KK ARLNMMAHLLSTI Y +V++ +++P
Sbjct 182 RWEDYSRAKDEMMVHTDIPEATWYVVEGDVKKEARLNMMAHLLSTIPYTEVDQASLQVPD 241
Query 267 RPLVSGNYRRPPRELSTYVDDYVATLIA 294
RP G Y RPPR+ STYV D+VATL+
Sbjct 242 RPPAKG-YERPPRDQSTYVPDHVATLLG 268
>gi|333991608|ref|YP_004524222.1| transcriptional regulator [Mycobacterium sp. JDM601]
gi|333487576|gb|AEF36968.1| transcriptional regulatory protein PvdS [Mycobacterium sp. JDM601]
Length=271
Score = 399 bits (1024), Expect = 4e-109, Method: Compositional matrix adjust.
Identities = 197/261 (76%), Positives = 220/261 (85%), Gaps = 0/261 (0%)
Query 32 KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVA 91
+I++ VYQAEL RLQTEFVKLQEW R SGAR+VVIFEGRD AGKGG IKRITE LNPRV
Sbjct 7 RIANDVYQAELLRLQTEFVKLQEWVRRSGARVVVIFEGRDAAGKGGVIKRITESLNPRVV 66
Query 92 RIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFL 151
+AALPAPT+RERGQWY+QRY+A LPA+GEI LFDRSWYNRAGVEKVMGFCT E+ FL
Sbjct 67 HVAALPAPTERERGQWYFQRYVAALPARGEITLFDRSWYNRAGVEKVMGFCTADEHARFL 126
Query 152 RQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDY 211
Q P+FEQ+LIDDGILLRKYWFSVS EQLRRF+ RRND ++QWKLSPMDLESV RW+DY
Sbjct 127 EQAPVFEQLLIDDGILLRKYWFSVSQEEQLRRFRNRRNDRLKQWKLSPMDLESVNRWDDY 186
Query 212 SRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVS 271
SRA+DEMM HTD P SPWYVVES+IKKHARLNMMAHLLSTI Y +V P+V+LP RP
Sbjct 187 SRARDEMMAHTDVPASPWYVVESEIKKHARLNMMAHLLSTIPYREVALPQVELPDRPAAG 246
Query 272 GNYRRPPRELSTYVDDYVATL 292
Y+RP R YV+DY ATL
Sbjct 247 DGYQRPDRGNYRYVEDYAATL 267
>gi|254381593|ref|ZP_04996957.1| regulatory protein [Streptomyces sp. Mg1]
gi|194340502|gb|EDX21468.1| regulatory protein [Streptomyces sp. Mg1]
Length=264
Score = 394 bits (1012), Expect = 1e-107, Method: Compositional matrix adjust.
Identities = 185/260 (72%), Positives = 216/260 (84%), Gaps = 1/260 (0%)
Query 33 ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVAR 92
+ AVY+ EL RLQTE +KLQEW R GARLVV+FEGRD AGKGG IKR+ E+LNPRVAR
Sbjct 3 LKKAVYEGELLRLQTELIKLQEWVRVEGARLVVVFEGRDAAGKGGTIKRVAEHLNPRVAR 62
Query 93 IAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLR 152
IAALP PT+RER QWY+QRY+ HLPA GEIVLFDRSWYNRAGVE VMGFCTP E+ LFLR
Sbjct 63 IAALPTPTERERTQWYFQRYVEHLPAAGEIVLFDRSWYNRAGVEHVMGFCTPAEHRLFLR 122
Query 153 QTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYS 212
Q P+FE+ML++DGILLRKYWFSVSDA Q RF+AR DP+R+WKLSPMDLES+ RWE YS
Sbjct 123 QCPVFERMLVEDGILLRKYWFSVSDAVQEERFRARTEDPLRRWKLSPMDLESLTRWEAYS 182
Query 213 RAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSG 272
RAKDEM+VHTDT +PWYVVESD K+ ARLNM+AHLLS++ Y DV P + LPPRP +G
Sbjct 183 RAKDEMLVHTDTEDTPWYVVESDDKRSARLNMIAHLLSSLPYEDVALPSLTLPPRPPSTG 242
Query 273 NYRRPPRELSTYVDDYVATL 292
Y+RPP++L V D+ +TL
Sbjct 243 -YQRPPKDLQNAVPDHASTL 261
>gi|269794813|ref|YP_003314268.1| hypothetical protein Sked_14980 [Sanguibacter keddieii DSM 10542]
gi|269096998|gb|ACZ21434.1| uncharacterized conserved protein [Sanguibacter keddieii DSM
10542]
Length=305
Score = 394 bits (1011), Expect = 1e-107, Method: Compositional matrix adjust.
Identities = 179/256 (70%), Positives = 215/256 (84%), Gaps = 1/256 (0%)
Query 37 VYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAAL 96
Y+AELFRLQ+E VKLQEW R SG RLV++FEGRD AGKG AIKR+T+YLN R R+AAL
Sbjct 50 AYEAELFRLQSELVKLQEWVRASGERLVIVFEGRDAAGKGSAIKRVTQYLNSRHVRVAAL 109
Query 97 PAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPI 156
PAPT+R++ QWY+Q+Y+ HLPA GEIVLFDRSWYNRAGVE+VMGFCTP E+ F+ Q P+
Sbjct 110 PAPTERQKSQWYFQKYVEHLPAAGEIVLFDRSWYNRAGVERVMGFCTPAEHKRFMAQCPV 169
Query 157 FEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKD 216
FEQ+LIDDGI+LRKYWFSVSDAEQ +RF +R DP+RQWKLSPMDLES+ RWEDYSRAKD
Sbjct 170 FEQLLIDDGIMLRKYWFSVSDAEQEKRFASRLEDPMRQWKLSPMDLESIARWEDYSRAKD 229
Query 217 EMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNYRR 276
+M +HTDTP SPW+VVES+ KK +RLNM++HLLST+ Y +V P + LP RP +G YRR
Sbjct 230 DMFIHTDTPASPWFVVESEDKKRSRLNMISHLLSTVPYEEVTHPPITLPERPASTG-YRR 288
Query 277 PPRELSTYVDDYVATL 292
PREL TYV D+ +TL
Sbjct 289 TPRELQTYVPDHASTL 304
>gi|290955015|ref|YP_003486197.1| regulator [Streptomyces scabiei 87.22]
gi|260644541|emb|CBG67626.1| putative regulator [Streptomyces scabiei 87.22]
Length=283
Score = 387 bits (994), Expect = 1e-105, Method: Compositional matrix adjust.
Identities = 184/261 (71%), Positives = 213/261 (82%), Gaps = 1/261 (0%)
Query 32 KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVA 91
K+S A Y+ EL RLQTE VKLQEW R GARLVV+FEGRD AGKGG IKR+ E+LNPRVA
Sbjct 24 KVSRAAYEQELLRLQTELVKLQEWVRAEGARLVVVFEGRDAAGKGGTIKRVAEHLNPRVA 83
Query 92 RIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFL 151
RIAALP PT+RER QWY+QRY+ LPA GEIVLFDRSWYNRAGVE VMGFCT +EY LFL
Sbjct 84 RIAALPKPTERERTQWYFQRYVEQLPAAGEIVLFDRSWYNRAGVEHVMGFCTQEEYQLFL 143
Query 152 RQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDY 211
RQ P+FE+ML++DGILLRKYWFSVSD EQ RF+ R DP+R+WKLSPMDLES+ WE Y
Sbjct 144 RQCPLFERMLVEDGILLRKYWFSVSDTEQQERFRRRLEDPLRRWKLSPMDLESLTHWEAY 203
Query 212 SRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVS 271
SRAKDEMMVHTD +PWYVVESD K+ ARLNM+AHLL+++ Y +V P ++LP RP +
Sbjct 204 SRAKDEMMVHTDLTEAPWYVVESDDKRRARLNMIAHLLASVPYHEVPPPVLELPERPAST 263
Query 272 GNYRRPPRELSTYVDDYVATL 292
G Y RPPR+L TYV D+ A L
Sbjct 264 G-YERPPRDLRTYVPDHAAGL 283
>gi|302549196|ref|ZP_07301538.1| regulatory protein [Streptomyces viridochromogenes DSM 40736]
gi|302466814|gb|EFL29907.1| regulatory protein [Streptomyces viridochromogenes DSM 40736]
Length=267
Score = 385 bits (990), Expect = 3e-105, Method: Compositional matrix adjust.
Identities = 182/261 (70%), Positives = 213/261 (82%), Gaps = 1/261 (0%)
Query 32 KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVA 91
++ VY+ EL RLQTE VKLQEW R G RLVV+FEGRD AGKGG IKR+TE+LNPRVA
Sbjct 8 RVRRKVYEKELLRLQTELVKLQEWVRAEGTRLVVVFEGRDAAGKGGTIKRVTEHLNPRVA 67
Query 92 RIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFL 151
RIAALP PT+RER QWY+QRY+ HLPA GEIVLFDRSWYNRAGVE VMGFCTP+E+ LFL
Sbjct 68 RIAALPKPTERERTQWYFQRYVEHLPAAGEIVLFDRSWYNRAGVEHVMGFCTPEEHQLFL 127
Query 152 RQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDY 211
RQ PIFE+ML++DG+LLRKYWFSVSD EQ RF+ R DP+R+WKLSPMDL+S+ RWE Y
Sbjct 128 RQCPIFERMLVEDGLLLRKYWFSVSDTEQQERFRKRLEDPLRRWKLSPMDLDSISRWEAY 187
Query 212 SRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVS 271
SRAKDEMMVHTD +PWYVVESD K+ ARLNM+AHLL ++ Y + P ++LP RP +
Sbjct 188 SRAKDEMMVHTDIIEAPWYVVESDDKRRARLNMIAHLLHSVPYHEAPPPVLELPDRPPST 247
Query 272 GNYRRPPRELSTYVDDYVATL 292
G Y RPPR+L TYV D+ A L
Sbjct 248 G-YERPPRDLRTYVPDHAAGL 267
>gi|311894849|dbj|BAJ27257.1| putative regulatory protein [Kitasatospora setae KM-6054]
Length=265
Score = 382 bits (982), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 181/258 (71%), Positives = 213/258 (83%), Gaps = 1/258 (0%)
Query 38 YQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALP 97
Y+ EL RLQ E VKLQEW R G R+V++FEGRD AGKGGAIKR+TEYLNPR+ARIAALP
Sbjct 6 YEDELLRLQRELVKLQEWVRTEGVRMVIVFEGRDAAGKGGAIKRVTEYLNPRIARIAALP 65
Query 98 APTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIF 157
APT+R+RGQWY+QRY LPA GE+VLFDRSWYNRAGVEKVMGFCT +EY FL Q P F
Sbjct 66 APTERQRGQWYFQRYAEQLPAAGEMVLFDRSWYNRAGVEKVMGFCTDEEYWQFLHQCPTF 125
Query 158 EQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDE 217
E+ML++ GILLRKYWFSVSD EQ RRF+ R +DP+RQWKLSPMD+ES+ RWEDYSRAKDE
Sbjct 126 ERMLVEAGILLRKYWFSVSDVEQERRFRDRLDDPMRQWKLSPMDVESITRWEDYSRAKDE 185
Query 218 MMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNYRRP 277
M V+TD P SPW VVESD K+ AR+NM+AHLLS++ Y +V KP V LPPRP G Y+RP
Sbjct 186 MFVYTDIPESPWNVVESDDKRRARINMIAHLLSSVPYHEVVKPAVTLPPRPEPRG-YQRP 244
Query 278 PRELSTYVDDYVATLIAR 295
PR+L YV D+ A ++A+
Sbjct 245 PRDLQKYVFDHAAAVLAQ 262
>gi|333921156|ref|YP_004494737.1| hypothetical protein AS9A_3497 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483377|gb|AEF41937.1| hypothetical protein AS9A_3497 [Amycolicicoccus subflavus DQS3-9A1]
Length=298
Score = 382 bits (982), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 177/284 (63%), Positives = 220/284 (78%), Gaps = 1/284 (0%)
Query 11 ATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGR 70
A +S A+ + A +K+ VY+ EL RLQ E V +Q W + +GAR+V +FEGR
Sbjct 2 AAKKDSSGVAEYNGKAKSAEKKLPIDVYEPELKRLQAELVSMQHWVQDTGARIVAVFEGR 61
Query 71 DGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWY 130
D AGKG AIKRITEYLNPR+ R+ ALPAPT+R+R QWY+QRYI HLPA GEIVL DRSWY
Sbjct 62 DAAGKGSAIKRITEYLNPRLCRVVALPAPTERQRTQWYFQRYIQHLPAAGEIVLLDRSWY 121
Query 131 NRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRND 190
NRAGVE+VMGFCT EY FL Q P FE++L++DGI+LRKYWFSVSD EQ RRF +R ND
Sbjct 122 NRAGVERVMGFCTSDEYFRFLHQVPTFERLLVEDGIMLRKYWFSVSDVEQERRFHSRLND 181
Query 191 PVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLS 250
P+RQWKLSPMDL+S+ RWE+YSRAKDEM VHTD P +PWY VES+ K+++R+N++ HLL
Sbjct 182 PMRQWKLSPMDLQSIVRWEEYSRAKDEMFVHTDIPEAPWYTVESEHKRNSRINVINHLLQ 241
Query 251 TIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIA 294
+I Y VE PKV++PPRP + NY+RPPRE YV++Y ATL+
Sbjct 242 SIPYEHVEPPKVEVPPRP-AATNYQRPPREQFRYVENYAATLLG 284
>gi|297198128|ref|ZP_06915525.1| regulatory protein [Streptomyces sviceus ATCC 29083]
gi|197714178|gb|EDY58212.1| regulatory protein [Streptomyces sviceus ATCC 29083]
Length=267
Score = 382 bits (981), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 180/264 (69%), Positives = 213/264 (81%), Gaps = 1/264 (0%)
Query 29 GRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNP 88
G K+ Y+ EL RLQTE VKLQEW R GAR+VV+FEGRD AGKGG IKR+ E+LNP
Sbjct 5 GAEKLPRKTYEKELLRLQTELVKLQEWVRAEGARVVVVFEGRDAAGKGGTIKRVAEHLNP 64
Query 89 RVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYV 148
RVARIAALP PT+RER QWY+QRY+ HLPA GEIVLFDRSWYNRAGVE VMGFCT +EY
Sbjct 65 RVARIAALPKPTERERSQWYFQRYVEHLPAAGEIVLFDRSWYNRAGVEHVMGFCTREEYQ 124
Query 149 LFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRW 208
LFLRQ PIFE+ML++ GI+LRKYWFSVSD EQ RF+ R DP+R+WKLSPMDLES+ W
Sbjct 125 LFLRQCPIFERMLVEAGIVLRKYWFSVSDTEQQERFRKRLEDPLRRWKLSPMDLESITHW 184
Query 209 EDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRP 268
E YSRAKDEM+VHTD +PW+VVESD K+ ARLNM+AHLL ++ Y +V P ++LP RP
Sbjct 185 EAYSRAKDEMLVHTDIAEAPWFVVESDDKRRARLNMIAHLLGSVPYREVPPPVLELPERP 244
Query 269 LVSGNYRRPPRELSTYVDDYVATL 292
+G Y+RPPR+L TYV D+ A+L
Sbjct 245 GSTG-YQRPPRDLQTYVPDHAASL 267
>gi|29827815|ref|NP_822449.1| regulatory protein [Streptomyces avermitilis MA-4680]
gi|29604916|dbj|BAC68984.1| putative regulatory protein [Streptomyces avermitilis MA-4680]
Length=267
Score = 378 bits (971), Expect = 5e-103, Method: Compositional matrix adjust.
Identities = 178/261 (69%), Positives = 210/261 (81%), Gaps = 1/261 (0%)
Query 32 KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVA 91
++ A Y+ EL RLQTE VKLQEW R GARLV++FEGRD AGKG IKR+ E+LNPR A
Sbjct 8 RVPRAAYEQELLRLQTELVKLQEWVRAEGARLVIVFEGRDAAGKGSTIKRVAEHLNPRQA 67
Query 92 RIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFL 151
RI ALP PT+RER QWY+QRY+ HLPA GEIVLFDRSWYNRAGVE VMGFCT +E+ LFL
Sbjct 68 RIVALPKPTERERTQWYFQRYVEHLPAAGEIVLFDRSWYNRAGVEHVMGFCTKEEHQLFL 127
Query 152 RQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDY 211
RQ PIFE+ML+++GILLRKYWFSVSDA Q RF+ R DP R+WKLSPMDLES+ RWE Y
Sbjct 128 RQCPIFERMLVEEGILLRKYWFSVSDAVQQERFRRRMKDPTRRWKLSPMDLESITRWEAY 187
Query 212 SRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVS 271
SRAKDEM+VHTD +PW+VVESD K+ ARLNMMAHLL ++ Y +V P ++LP RP +
Sbjct 188 SRAKDEMLVHTDISEAPWFVVESDDKRRARLNMMAHLLGSVPYYEVPPPVLELPRRPPST 247
Query 272 GNYRRPPRELSTYVDDYVATL 292
G Y RPPR+L TYV D+ A+L
Sbjct 248 G-YERPPRDLQTYVPDHAASL 267
>gi|331696455|ref|YP_004332694.1| polyphosphate kinase 2 [Pseudonocardia dioxanivorans CB1190]
gi|326951144|gb|AEA24841.1| polyphosphate kinase 2 [Pseudonocardia dioxanivorans CB1190]
Length=277
Score = 378 bits (971), Expect = 6e-103, Method: Compositional matrix adjust.
Identities = 176/277 (64%), Positives = 222/277 (81%), Gaps = 2/277 (0%)
Query 16 ASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGK 75
A A + AP R+++ Y+ EL RLQ E V+LQEW R +G+R+VV+FEGRD AGK
Sbjct 2 AKPTATSSEAEAP-RKRVPRKAYEGELLRLQGELVQLQEWVRDTGSRIVVVFEGRDAAGK 60
Query 76 GGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGV 135
GGAIKR+TE+LNPRVARI ALPAPT+R+R QWY+QRY+ HLPA GEIVL DRSWYNRAGV
Sbjct 61 GGAIKRVTEHLNPRVARIVALPAPTERQRTQWYFQRYVEHLPAAGEIVLLDRSWYNRAGV 120
Query 136 EKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQW 195
E+VMGFCTP+EY FLRQ PIFE +L++DGI+LRKYWFSVSD EQ RRF R +DP++QW
Sbjct 121 ERVMGFCTPEEYQRFLRQCPIFENLLVEDGIVLRKYWFSVSDHEQARRFAERASDPLKQW 180
Query 196 KLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYA 255
KLSPMDLES+ RW+ YS+AKD+M++HTDT ++PW+VVE++ K+ ARLNM+ HLLS+I +
Sbjct 181 KLSPMDLESITRWDAYSQAKDDMLIHTDTEIAPWWVVEAEDKRAARLNMIHHLLSSIPWE 240
Query 256 DVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATL 292
+P++ LP RP SG Y+RPPRE+ V D+ ATL
Sbjct 241 PRARPRLALPDRPASSG-YQRPPREIQRSVPDHAATL 276
>gi|340360267|ref|ZP_08682737.1| polyphosphate kinase 2 [Actinomyces sp. oral taxon 448 str. F0400]
gi|339883468|gb|EGQ73311.1| polyphosphate kinase 2 [Actinomyces sp. oral taxon 448 str. F0400]
Length=280
Score = 377 bits (969), Expect = 9e-103, Method: Compositional matrix adjust.
Identities = 177/259 (69%), Positives = 212/259 (82%), Gaps = 1/259 (0%)
Query 36 AVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAA 95
++Y+AEL RLQ E V++QEW R +GAR+VV+FEGRD AGKGGAIKRITEYLNPR+AR+ A
Sbjct 4 SLYEAELLRLQAELVEMQEWVRSTGARVVVVFEGRDAAGKGGAIKRITEYLNPRIARVVA 63
Query 96 LPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTP 155
LPAPT+RER QWY+QRYIAHLPA GEI LFDRSWYNR GVE VMG+CTP+E+ FLRQ P
Sbjct 64 LPAPTERERTQWYFQRYIAHLPAAGEIRLFDRSWYNRGGVEHVMGYCTPEEHQRFLRQCP 123
Query 156 IFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAK 215
IFE+ML++DGILLRKYWFSVSD EQ +RFK+R+ DP+R+WKLSP DLES+ RWEDYSRAK
Sbjct 124 IFERMLVEDGILLRKYWFSVSDKEQYKRFKSRQTDPMRRWKLSPTDLESITRWEDYSRAK 183
Query 216 DEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNYR 275
DEM VHTD + W+VVES+ K+ AR+NM+ HLL +I Y VE+P +K P RP +G Y+
Sbjct 184 DEMFVHTDIETARWHVVESEDKRKARINMIHHLLGSIPYEHVERPPMKFPKRPPSTG-YQ 242
Query 276 RPPRELSTYVDDYVATLIA 294
R R L V DY ATL A
Sbjct 243 RTARALQLEVPDYAATLSA 261
>gi|297154769|gb|ADI04481.1| regulatory protein [Streptomyces bingchenggensis BCW-1]
Length=293
Score = 376 bits (966), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 178/266 (67%), Positives = 216/266 (82%), Gaps = 1/266 (0%)
Query 29 GRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNP 88
G ++ A Y++EL RLQ E V+LQEW R G RLVV+FEGRD AGKGGAIKR+TE LNP
Sbjct 5 GFGRLPRARYESELRRLQIELVRLQEWVRAEGRRLVVVFEGRDAAGKGGAIKRVTECLNP 64
Query 89 RVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYV 148
R+ARI ALP PT+RER QWY+QRY A LPA GEIVLFDRSWYNRAGVE+VMGFCT +E+
Sbjct 65 RIARIVALPVPTERERTQWYFQRYAAQLPAAGEIVLFDRSWYNRAGVERVMGFCTEEEHQ 124
Query 149 LFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRW 208
FL Q P+FE+ML++DGILLRKYWFSVSDAEQ +RF+ R +DP R+WK+S MDLES+ RW
Sbjct 125 RFLLQCPVFERMLVEDGILLRKYWFSVSDAEQEQRFRRRLSDPARRWKISAMDLESITRW 184
Query 209 EDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRP 268
E YS+AKDEM TD P +PWYVVE+D K+ AR+NM+AHLLST+ Y DV P+++LPPRP
Sbjct 185 EAYSQAKDEMFARTDVPGAPWYVVEADDKRAARINMIAHLLSTVPYGDVRLPELRLPPRP 244
Query 269 LVSGNYRRPPRELSTYVDDYVATLIA 294
+G Y RPPR+L TYV D+ A+L+A
Sbjct 245 APTG-YERPPRQLQTYVPDHAASLLA 269
>gi|255325406|ref|ZP_05366510.1| polyphosphate kinase 2 [Corynebacterium tuberculostearicum SK141]
gi|255297492|gb|EET76805.1| polyphosphate kinase 2 [Corynebacterium tuberculostearicum SK141]
Length=295
Score = 374 bits (959), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 173/269 (65%), Positives = 211/269 (79%), Gaps = 3/269 (1%)
Query 25 SAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITE 84
S AP +K++ Y+ EL RLQ E V +Q+W +GAR+V+I EGRD AGKG AIKRIT+
Sbjct 6 SKAP--KKLNKKAYEKELERLQAELVDMQQWVVETGARVVIIMEGRDAAGKGSAIKRITQ 63
Query 85 YLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTP 144
YLNPR RI ALPAP RE+GQWY+QRY+ LP KGEIV+FDRSWYNRAGVE+VMGFCT
Sbjct 64 YLNPRTCRIEALPAPNSREQGQWYFQRYVEKLPTKGEIVIFDRSWYNRAGVERVMGFCTD 123
Query 145 QEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLES 204
QEYV FL Q P FEQML++DGI+LRKYWFSVSD EQ++RF++RRNDP+R+WKLSPMDL+S
Sbjct 124 QEYVRFLHQAPTFEQMLVEDGIMLRKYWFSVSDEEQIKRFESRRNDPLRRWKLSPMDLQS 183
Query 205 VYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKL 264
+ RWEDYSRAKD M +HTDTP +PWY VES+ KK +R+N+++HLLSTI Y +E+ ++
Sbjct 184 ITRWEDYSRAKDAMFIHTDTPTAPWYTVESEDKKRSRINVISHLLSTIPYEKLEREMPEI 243
Query 265 PPRPLVSG-NYRRPPRELSTYVDDYVATL 292
PPRP G Y RP RE YV D A L
Sbjct 244 PPRPDSDGETYERPAREEFRYVPDVAAKL 272
>gi|311740788|ref|ZP_07714615.1| polyphosphate kinase 2 [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304308|gb|EFQ80384.1| polyphosphate kinase 2 [Corynebacterium pseudogenitalium ATCC
33035]
Length=295
Score = 371 bits (953), Expect = 7e-101, Method: Compositional matrix adjust.
Identities = 172/269 (64%), Positives = 210/269 (79%), Gaps = 3/269 (1%)
Query 25 SAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITE 84
S AP +K++ Y+ EL RLQ E V +Q+W +GAR+V+I EGRD AGKG AIKRIT+
Sbjct 6 SKAP--KKLNKKAYEKELERLQAELVDMQQWVVETGARVVIIMEGRDAAGKGSAIKRITQ 63
Query 85 YLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTP 144
YLNPR RI ALPAP RE+GQWY+QRY+ LP KGEIV+FDRSWYNRAGVE+VMGFCT
Sbjct 64 YLNPRTCRIEALPAPNSREQGQWYFQRYVEKLPTKGEIVIFDRSWYNRAGVERVMGFCTD 123
Query 145 QEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLES 204
QEYV FL Q P FEQML++DGI+LRKYWFSVSD EQ++RF++RRNDP+R+WKLSPMDL+S
Sbjct 124 QEYVRFLHQAPTFEQMLVEDGIMLRKYWFSVSDEEQIKRFESRRNDPLRRWKLSPMDLQS 183
Query 205 VYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKL 264
+ RWEDYSRAKD M +HTDTP +PWY VES+ KK +R+N+++HLLSTI Y +E+ ++
Sbjct 184 ITRWEDYSRAKDAMFIHTDTPTAPWYTVESEDKKRSRINVISHLLSTIPYEKIEREMPEI 243
Query 265 PPRPLVSGN-YRRPPRELSTYVDDYVATL 292
P RP G Y RP RE YV D A L
Sbjct 244 PQRPDSDGEAYERPAREEFRYVPDVAAKL 272
>gi|258651931|ref|YP_003201087.1| hypothetical protein Namu_1708 [Nakamurella multipartita DSM
44233]
gi|258555156|gb|ACV78098.1| protein of unknown function DUF344 [Nakamurella multipartita
DSM 44233]
Length=281
Score = 370 bits (949), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 178/277 (65%), Positives = 216/277 (78%), Gaps = 4/277 (1%)
Query 20 AKGHRSAA--PGRR-KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKG 76
++ H+SA P R KI AVY+AEL RLQTE V +Q+W R SG R+V IFEGRD AGKG
Sbjct 2 SEKHKSAPANPERPPKIKKAVYEAELRRLQTELVTMQQWVRESGTRIVAIFEGRDAAGKG 61
Query 77 GAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVE 136
AIKRITE+LNPR ARI ALPAPT+R+R QWY+QRYI HLPA GEIVL DRSWYNRAGVE
Sbjct 62 SAIKRITEFLNPRTARIVALPAPTERQRTQWYFQRYIEHLPAAGEIVLMDRSWYNRAGVE 121
Query 137 KVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWK 196
+VMGFCT EY FL Q PIFE++L++DGILL K+WFSVSD EQ RRF +R DP+R+WK
Sbjct 122 RVMGFCTTDEYRRFLHQAPIFERLLVEDGILLFKFWFSVSDVEQERRFHSRLTDPMRRWK 181
Query 197 LSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYAD 256
LSPMD++S+ RWEDYSRAKDEM +HTD P +PWY VES+ KK +R+N+++H+LS + Y
Sbjct 182 LSPMDVQSISRWEDYSRAKDEMFIHTDIPEAPWYTVESEDKKRSRINVISHILSQVPYEH 241
Query 257 VEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLI 293
+E KV +P RP S Y RPPRE YV D+ A+L+
Sbjct 242 LEPEKVTIPERP-PSRTYVRPPREEFKYVKDHAASLV 277
>gi|38233479|ref|NP_939246.1| putative RNA polymerase sigma factor [Corynebacterium diphtheriae
NCTC 13129]
gi|38199739|emb|CAE49399.1| Putative RNA polymerase sigma factor [Corynebacterium diphtheriae]
Length=301
Score = 369 bits (948), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 167/261 (64%), Positives = 205/261 (79%), Gaps = 0/261 (0%)
Query 32 KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVA 91
K+ Y+AEL RLQ E V +Q+W +GAR+V+I EGRD AGKG AIKR+T+YLNPR
Sbjct 21 KLDKQAYEAELKRLQAELVDMQQWVVETGARVVIIMEGRDAAGKGSAIKRMTQYLNPRTC 80
Query 92 RIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFL 151
RI ALPAP RE+GQWY+QRY+ LP GEIV+FDRSWYNRAGVE+VMGFCT QEY FL
Sbjct 81 RIEALPAPNSREQGQWYFQRYVEKLPTAGEIVIFDRSWYNRAGVERVMGFCTSQEYRRFL 140
Query 152 RQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDY 211
Q PIFE++L++DGI+LRKYWFSVSD EQ+ RFK+RRNDP+R+WKLSPMDL+S+ RWEDY
Sbjct 141 HQAPIFERLLVEDGIMLRKYWFSVSDEEQIARFKSRRNDPLRRWKLSPMDLQSITRWEDY 200
Query 212 SRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVS 271
SRAKDEM VHTD P +PWY VES+ KK +R+N+++HLLSTI Y +++P +P RP
Sbjct 201 SRAKDEMFVHTDIPSAPWYTVESEDKKRSRINVISHLLSTIPYEKIDRPLPDIPERPAQD 260
Query 272 GNYRRPPRELSTYVDDYVATL 292
+Y+RPPR YV D AT
Sbjct 261 KDYKRPPRSDFRYVPDVAATF 281
>gi|227875826|ref|ZP_03993952.1| polyphosphate kinase 2 [Mobiluncus mulieris ATCC 35243]
gi|227843574|gb|EEJ53757.1| polyphosphate kinase 2 [Mobiluncus mulieris ATCC 35243]
Length=347
Score = 369 bits (946), Expect = 4e-100, Method: Compositional matrix adjust.
Identities = 175/276 (64%), Positives = 213/276 (78%), Gaps = 5/276 (1%)
Query 23 HRSAAPGRR--KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIK 80
H + P R K+ + +Y+ E++RLQTE KLQ W + +GAR+VVIFEGRD AGKGG IK
Sbjct 41 HSATDPELRYTKVPNKIYETEMYRLQTELAKLQRWVKTTGARIVVIFEGRDAAGKGGTIK 100
Query 81 RITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMG 140
R+TEYL+PRVAR+ ALP PT+RE+ QWY+QRYI+HLPA GEIV+FDRSWYNRAGVEKVMG
Sbjct 101 RLTEYLSPRVARVVALPTPTEREKTQWYFQRYISHLPAAGEIVIFDRSWYNRAGVEKVMG 160
Query 141 FCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPM 200
F TP + F++Q P FE+ML++DGI LRKYWFSVSD EQ RF+ R NDP+RQWKLSPM
Sbjct 161 FATPSQVKQFMQQCPTFERMLVEDGIYLRKYWFSVSDKEQYDRFQRRLNDPLRQWKLSPM 220
Query 201 DLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADV--E 258
DLES+ RWEDYSRAKDEM+VHTDT PWY V SD KK ARLNM++H L +I Y D+ E
Sbjct 221 DLESISRWEDYSRAKDEMLVHTDTTTCPWYHVPSDSKKAARLNMISHFLGSIPYTDMTDE 280
Query 259 KPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIA 294
++LP RP +G Y RPP S YV D+ A ++A
Sbjct 281 STPIRLPDRPPSTG-YVRPPLATSQYVPDHAAEVVA 315
>gi|306819107|ref|ZP_07452821.1| PPK2 family polyphosphate:nucleotide phosphotransferase [Mobiluncus
mulieris ATCC 35239]
gi|304648083|gb|EFM45394.1| PPK2 family polyphosphate:nucleotide phosphotransferase [Mobiluncus
mulieris ATCC 35239]
Length=347
Score = 369 bits (946), Expect = 4e-100, Method: Compositional matrix adjust.
Identities = 175/276 (64%), Positives = 213/276 (78%), Gaps = 5/276 (1%)
Query 23 HRSAAPGRR--KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIK 80
H + P R K+ + +Y+ E++RLQTE KLQ W + +GAR+VVIFEGRD AGKGG IK
Sbjct 41 HSATDPELRYTKVPNKIYETEMYRLQTELAKLQRWVKTTGARIVVIFEGRDAAGKGGTIK 100
Query 81 RITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMG 140
R+TEYL+PRVAR+ ALP PT+RE+ QWY+QRYI+HLPA GEIV+FDRSWYNRAGVEKVMG
Sbjct 101 RLTEYLSPRVARVVALPTPTEREKTQWYFQRYISHLPAAGEIVIFDRSWYNRAGVEKVMG 160
Query 141 FCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPM 200
F TP + F++Q P FE+ML++DGI LRKYWFSVSD EQ RF+ R NDP+RQWKLSPM
Sbjct 161 FATPSQVKQFMQQCPTFERMLVEDGIYLRKYWFSVSDKEQYDRFQRRLNDPLRQWKLSPM 220
Query 201 DLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADV--E 258
DLES+ RWEDYSRAKDEM+VHTDT PWY V SD KK ARLNM++H L +I Y D+ E
Sbjct 221 DLESISRWEDYSRAKDEMLVHTDTTTCPWYHVPSDSKKAARLNMISHFLGSIPYTDMTDE 280
Query 259 KPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIA 294
++LP RP +G Y RPP S YV D+ A ++A
Sbjct 281 STPIRLPDRPPSTG-YVRPPLATSQYVPDHAAEVVA 315
>gi|269977461|ref|ZP_06184433.1| polyphosphate kinase 2 [Mobiluncus mulieris 28-1]
gi|307700338|ref|ZP_07637378.1| polyphosphate kinase 2 [Mobiluncus mulieris FB024-16]
gi|269934377|gb|EEZ90939.1| polyphosphate kinase 2 [Mobiluncus mulieris 28-1]
gi|307614549|gb|EFN93778.1| polyphosphate kinase 2 [Mobiluncus mulieris FB024-16]
Length=311
Score = 368 bits (945), Expect = 5e-100, Method: Compositional matrix adjust.
Identities = 175/276 (64%), Positives = 213/276 (78%), Gaps = 5/276 (1%)
Query 23 HRSAAPGRR--KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIK 80
H + P R K+ + +Y+ E++RLQTE KLQ W + +GAR+VVIFEGRD AGKGG IK
Sbjct 5 HSATDPELRYTKVPNKIYETEMYRLQTELAKLQRWVKTTGARIVVIFEGRDAAGKGGTIK 64
Query 81 RITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMG 140
R+TEYL+PRVAR+ ALP PT+RE+ QWY+QRYI+HLPA GEIV+FDRSWYNRAGVEKVMG
Sbjct 65 RLTEYLSPRVARVVALPTPTEREKTQWYFQRYISHLPAAGEIVIFDRSWYNRAGVEKVMG 124
Query 141 FCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPM 200
F TP + F++Q P FE+ML++DGI LRKYWFSVSD EQ RF+ R NDP+RQWKLSPM
Sbjct 125 FATPSQVKQFMQQCPTFERMLVEDGIYLRKYWFSVSDKEQYDRFQRRLNDPLRQWKLSPM 184
Query 201 DLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADV--E 258
DLES+ RWEDYSRAKDEM+VHTDT PWY V SD KK ARLNM++H L +I Y D+ E
Sbjct 185 DLESISRWEDYSRAKDEMLVHTDTTTCPWYHVPSDSKKAARLNMISHFLGSIPYTDMTDE 244
Query 259 KPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLIA 294
++LP RP +G Y RPP S YV D+ A ++A
Sbjct 245 STPIRLPDRPPSTG-YVRPPLATSQYVPDHAAEVVA 279
>gi|336326191|ref|YP_004606157.1| polyphosphate kinase [Corynebacterium resistens DSM 45100]
gi|336102173|gb|AEI09993.1| polyphosphate kinase [Corynebacterium resistens DSM 45100]
Length=335
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 167/261 (64%), Positives = 206/261 (79%), Gaps = 0/261 (0%)
Query 32 KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVA 91
K+ Y+ +L +LQ E V++Q+W +GAR+V++ EGRD AGKG AIKRIT+YLNPRV
Sbjct 7 KLDKKAYEDQLEKLQAELVEMQQWVVETGARIVIVMEGRDAAGKGSAIKRITQYLNPRVC 66
Query 92 RIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFL 151
R+ ALPAP RE+GQWY+QRYI LP GEIV+FDRSWYNRAGVE+VMGFCT EY FL
Sbjct 67 RVEALPAPNSREQGQWYFQRYIEKLPTAGEIVIFDRSWYNRAGVERVMGFCTTHEYRRFL 126
Query 152 RQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDY 211
Q PIFE++L++DGILLRKYWFSVSD EQ+RRF++R++DP+RQWKLSPMDL+S+ RWEDY
Sbjct 127 HQAPIFERLLVEDGILLRKYWFSVSDEEQVRRFQSRQSDPMRQWKLSPMDLQSITRWEDY 186
Query 212 SRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVS 271
SRAKDEM VHTD P +PWY VES+ KK +R+N++ HLLSTI + VEK K+P RP +
Sbjct 187 SRAKDEMFVHTDIPSAPWYTVESEDKKRSRINVITHLLSTIPWEYVEKNIPKIPDRPEST 246
Query 272 GNYRRPPRELSTYVDDYVATL 292
NY RPPR + YV D A L
Sbjct 247 SNYERPPRSMFRYVPDVAAEL 267
>gi|225023029|ref|ZP_03712221.1| hypothetical protein CORMATOL_03077 [Corynebacterium matruchotii
ATCC 33806]
gi|224944252|gb|EEG25461.1| hypothetical protein CORMATOL_03077 [Corynebacterium matruchotii
ATCC 33806]
Length=279
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/264 (66%), Positives = 208/264 (79%), Gaps = 2/264 (0%)
Query 32 KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVA 91
K+S Y+AEL RLQ E V++Q W +GAR+VVI EGRD AGKG AIKRIT+YLNPR
Sbjct 11 KLSKEAYEAELKRLQAELVEMQRWVVETGARVVVIMEGRDAAGKGSAIKRITQYLNPRTC 70
Query 92 RIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFL 151
R+ ALPAP RERGQWY+QRY+ LP KGEIV+FDRSWYNRAGVE+VMGFCT +EY FL
Sbjct 71 RVEALPAPGTRERGQWYFQRYVEKLPTKGEIVIFDRSWYNRAGVERVMGFCTSEEYRRFL 130
Query 152 RQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDY 211
Q PIFE++L++DGI+LRKYWFSVSD EQ+ RFK+RRNDP+R+WKLSPMDL+S+ RWEDY
Sbjct 131 HQAPIFERLLVEDGIMLRKYWFSVSDDEQIARFKSRRNDPLRRWKLSPMDLQSITRWEDY 190
Query 212 SRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVS 271
SRAKDEM +HTD P +PWY VES+ KK +R+N++AHLLSTI Y ++ P +P RP
Sbjct 191 SRAKDEMFIHTDIPSAPWYTVESEDKKRSRINVIAHLLSTIPYEKIDTPLPDIPERPQSE 250
Query 272 GNYRRPPRELSTYVDDYVATLIAR 295
G Y RPPR YV D VAT + R
Sbjct 251 G-YERPPRSDFRYVPD-VATQLER 272
>gi|227832716|ref|YP_002834423.1| putative polyphosphate kinase [Corynebacterium aurimucosum ATCC
700975]
gi|262182795|ref|ZP_06042216.1| putative polyphosphate kinase [Corynebacterium aurimucosum ATCC
700975]
gi|227453732|gb|ACP32485.1| putative polyphosphate kinase [Corynebacterium aurimucosum ATCC
700975]
Length=301
Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/276 (63%), Positives = 208/276 (76%), Gaps = 3/276 (1%)
Query 17 SSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKG 76
SS++K + P K+ Y+ EL RLQ E V++Q+W +GAR+V+I EGRD AGKG
Sbjct 2 SSQSKKSATKPP---KLDKQAYEDELKRLQAELVEMQQWVVETGARVVIIMEGRDAAGKG 58
Query 77 GAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVE 136
AIKRIT+YLNPR RI ALP PTDRE GQWY+QRYI LP GEIV+FDRSWYNRAGVE
Sbjct 59 SAIKRITQYLNPRTCRIEALPKPTDREAGQWYFQRYIEKLPTAGEIVIFDRSWYNRAGVE 118
Query 137 KVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWK 196
+VMGFC+ QEYV FL Q P+ E MLI+DGI+L KYWFSVSD EQL RFK+RRNDP+R+WK
Sbjct 119 RVMGFCSQQEYVRFLHQAPLLEHMLIEDGIILLKYWFSVSDEEQLARFKSRRNDPLRRWK 178
Query 197 LSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYAD 256
LSPMDL+S+ RWEDYSRAKDEM VHTDTP SPWY VES+ KK +R+N++ H+L T+ Y
Sbjct 179 LSPMDLQSITRWEDYSRAKDEMFVHTDTPSSPWYTVESEDKKRSRINVINHILKTVPYQH 238
Query 257 VEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATL 292
VE+ ++P RP + Y RPPR YV D A L
Sbjct 239 VEQDVPEIPNRPELEAEYVRPPRNDFAYVPDVAADL 274
>gi|305682018|ref|ZP_07404822.1| polyphosphate kinase 2 [Corynebacterium matruchotii ATCC 14266]
gi|305658491|gb|EFM47994.1| polyphosphate kinase 2 [Corynebacterium matruchotii ATCC 14266]
Length=279
Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/264 (66%), Positives = 208/264 (79%), Gaps = 2/264 (0%)
Query 32 KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVA 91
K+S Y+AEL RLQ E V++Q W +GAR+VV+ EGRD AGKG AIKRIT+YLNPR
Sbjct 11 KLSKEAYEAELKRLQAELVEMQRWVVETGARVVVLMEGRDAAGKGSAIKRITQYLNPRTC 70
Query 92 RIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFL 151
R+ ALPAP RERGQWY+QRY+ LP KGEIV+FDRSWYNRAGVE+VMGFCT +EY FL
Sbjct 71 RVEALPAPGTRERGQWYFQRYVEKLPTKGEIVIFDRSWYNRAGVERVMGFCTSEEYRRFL 130
Query 152 RQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDY 211
Q PIFE++L++DGI+LRKYWFSVSD EQ+ RFK+RRNDP+R+WKLSPMDL+S+ RWEDY
Sbjct 131 HQAPIFERLLVEDGIMLRKYWFSVSDDEQIARFKSRRNDPLRRWKLSPMDLQSITRWEDY 190
Query 212 SRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVS 271
SRAKDEM +HTD P +PWY VES+ KK +R+N++AHLLSTI Y ++ P +P RP
Sbjct 191 SRAKDEMFIHTDIPSAPWYTVESEDKKRSRINVIAHLLSTIPYEKIDTPLPDIPERPQSE 250
Query 272 GNYRRPPRELSTYVDDYVATLIAR 295
G Y RPPR YV D VAT + R
Sbjct 251 G-YERPPRSDFRYVPD-VATQLER 272
>gi|326771901|ref|ZP_08231186.1| polyphosphate kinase 2 [Actinomyces viscosus C505]
gi|326638034|gb|EGE38935.1| polyphosphate kinase 2 [Actinomyces viscosus C505]
Length=279
Score = 365 bits (937), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 172/258 (67%), Positives = 206/258 (80%), Gaps = 1/258 (0%)
Query 36 AVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAA 95
++Y+AEL RLQ E V++QEW R +GAR+VVIFEGRD AGKGGAIKRITEYLNPR+AR+ A
Sbjct 4 SLYEAELLRLQAELVEMQEWVRATGARVVVIFEGRDAAGKGGAIKRITEYLNPRIARVVA 63
Query 96 LPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTP 155
LP PT+RER QWY+QRYIAHLPA GEI LFDRSWYNR GVE VMG+CTP+E+ FL+Q P
Sbjct 64 LPVPTERERTQWYFQRYIAHLPAAGEICLFDRSWYNRGGVEHVMGYCTPEEHRRFLQQCP 123
Query 156 IFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAK 215
+FE+ML+DDGILLRKYWFSV EQ +RFK+R DP+R+WKLSP DLE++ RWEDYSRAK
Sbjct 124 VFERMLVDDGILLRKYWFSVPQKEQYKRFKSRMTDPMRRWKLSPTDLEALPRWEDYSRAK 183
Query 216 DEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPR-PLVSGNY 274
DEM VHTD + W+VVES K+ ARLNM+ HLL +I Y VE+P++ P + L S Y
Sbjct 184 DEMFVHTDIDSARWHVVESADKRKARLNMIHHLLESIPYEHVERPEMTFPKKSSLPSSGY 243
Query 275 RRPPRELSTYVDDYVATL 292
RR R L + V DY ATL
Sbjct 244 RRTDRSLQSEVPDYAATL 261
>gi|300858103|ref|YP_003783086.1| hypothetical protein cpfrc_00685 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685557|gb|ADK28479.1| hypothetical protein cpfrc_00685 [Corynebacterium pseudotuberculosis
FRC41]
gi|302205828|gb|ADL10170.1| Transcriptional regulatory protein PvdS [Corynebacterium pseudotuberculosis
C231]
gi|302330385|gb|ADL20579.1| Transcriptional regulatory protein PvdS [Corynebacterium pseudotuberculosis
1002]
gi|308276063|gb|ADO25962.1| putative RNA polymerase sigma factor [Corynebacterium pseudotuberculosis
I19]
gi|341824500|gb|AEK92021.1| Transcriptional regulatory protein PvdS [Corynebacterium pseudotuberculosis
PAT10]
Length=287
Score = 364 bits (935), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 168/273 (62%), Positives = 211/273 (78%), Gaps = 2/273 (0%)
Query 20 AKGH--RSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGG 77
AK H A RK+S Y+ EL +LQ E V +Q+W +GAR+VVI EGRD AGKG
Sbjct 2 AKEHIEEKKAKAPRKLSKKAYEKELKKLQAELVDMQQWVVETGARVVVIMEGRDAAGKGS 61
Query 78 AIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEK 137
AIKRIT+YLNPR RI ALPAP+ RE+GQWY+QRY+ LP GEIV+FDRSWYNRAGVE+
Sbjct 62 AIKRITQYLNPRTCRIEALPAPSSREQGQWYFQRYVEKLPTAGEIVIFDRSWYNRAGVER 121
Query 138 VMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKL 197
VMGFC QEY FL Q PIFEQ+L++DGI+LRKYWFSVSD EQ++RF++RR+DP+R+WKL
Sbjct 122 VMGFCDSQEYRRFLHQAPIFEQLLVEDGIMLRKYWFSVSDEEQIKRFESRRSDPLRRWKL 181
Query 198 SPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADV 257
SPMDL+S+ +WEDYSRAKDEM +HTD P +PWY VES+ KK +R+N+++HLLSTI Y +
Sbjct 182 SPMDLQSIMKWEDYSRAKDEMFIHTDIPSAPWYTVESEDKKRSRINVISHLLSTIPYEKI 241
Query 258 EKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVA 290
++P ++P RP + +Y RPPR YV D A
Sbjct 242 DRPLPEIPQRPPLKKDYVRPPRSDFRYVPDVAA 274
>gi|68536590|ref|YP_251295.1| hypothetical protein jk1504 [Corynebacterium jeikeium K411]
gi|68264189|emb|CAI37677.1| conserved hypothetical protein [Corynebacterium jeikeium K411]
Length=326
Score = 364 bits (935), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 166/256 (65%), Positives = 204/256 (80%), Gaps = 0/256 (0%)
Query 32 KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVA 91
K+ Y+ EL RLQ E V+LQ+W +GAR+V++ EGRD AGKG AIKRIT+YL+PRV
Sbjct 7 KLDKQAYEKELKRLQAELVELQQWVVETGARIVIVMEGRDAAGKGSAIKRITQYLSPRVC 66
Query 92 RIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFL 151
RI ALPAP+ RE+GQWY+QRYI LP GEIV+FDRSWYNRAGVE+VMGFCT QEY FL
Sbjct 67 RIEALPAPSSREKGQWYFQRYIEKLPTAGEIVIFDRSWYNRAGVERVMGFCTTQEYRRFL 126
Query 152 RQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDY 211
Q PIFE++L++DGI+LRKYWFSVSD EQ+RRF++R++DP+RQWKLSPMDL+S+ RWEDY
Sbjct 127 HQAPIFERLLVEDGIILRKYWFSVSDEEQIRRFQSRQSDPLRQWKLSPMDLQSITRWEDY 186
Query 212 SRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVS 271
SRAKDEM VHTD P +PWY VES+ KK +R+N++ HLL+TI + VEK K+P RP
Sbjct 187 SRAKDEMFVHTDIPSAPWYTVESEDKKRSRINVINHLLNTIPWEYVEKSVPKIPERPASD 246
Query 272 GNYRRPPRELSTYVDD 287
+Y RPPR YV D
Sbjct 247 SSYERPPRTQFRYVPD 262
>gi|325066916|ref|ZP_08125589.1| hypothetical protein AoriK_03811 [Actinomyces oris K20]
Length=279
Score = 364 bits (935), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 171/258 (67%), Positives = 206/258 (80%), Gaps = 1/258 (0%)
Query 36 AVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAA 95
++Y+AEL RLQ E V++QEW R +GAR+VVIFEGRD AGKGGAIKRITEYLNPR+AR+ A
Sbjct 4 SLYEAELLRLQAELVEMQEWVRATGARVVVIFEGRDAAGKGGAIKRITEYLNPRIARVVA 63
Query 96 LPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTP 155
LP PT+RER QWY+QRYIAHLPA GEI LFDRSWYNR GVE VMG+CTP+E+ FL+Q P
Sbjct 64 LPVPTERERTQWYFQRYIAHLPAAGEICLFDRSWYNRGGVEHVMGYCTPEEHRRFLQQCP 123
Query 156 IFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAK 215
+FE+ML+DDGILLRKYWFSV EQ +RFK+R DP+R+WKLSP DLE++ RWEDYSRAK
Sbjct 124 VFERMLVDDGILLRKYWFSVPQKEQYKRFKSRMTDPMRRWKLSPTDLEALPRWEDYSRAK 183
Query 216 DEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPR-PLVSGNY 274
DEM VHTD + W+VVES K+ ARLNM+ HLL +I Y VE+P++ P + L + Y
Sbjct 184 DEMFVHTDIDSARWHVVESADKRKARLNMIHHLLESIPYEHVERPEMTFPKKSSLPTSGY 243
Query 275 RRPPRELSTYVDDYVATL 292
RR R L + V DY ATL
Sbjct 244 RRTDRSLQSEVPDYAATL 261
>gi|260577733|ref|ZP_05845668.1| polyphosphate kinase 2 [Corynebacterium jeikeium ATCC 43734]
gi|258604128|gb|EEW17370.1| polyphosphate kinase 2 [Corynebacterium jeikeium ATCC 43734]
Length=326
Score = 364 bits (935), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 166/256 (65%), Positives = 204/256 (80%), Gaps = 0/256 (0%)
Query 32 KISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVA 91
K+ Y+ EL RLQ E V+LQ+W +GAR+V++ EGRD AGKG AIKRIT+YL+PRV
Sbjct 7 KLDKQAYEKELKRLQAELVELQQWVVETGARIVIVMEGRDAAGKGSAIKRITQYLSPRVC 66
Query 92 RIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFL 151
RI ALPAP+ RE+GQWY+QRYI LP GEIV+FDRSWYNRAGVE+VMGFCT QEY FL
Sbjct 67 RIEALPAPSSREKGQWYFQRYIEKLPTAGEIVIFDRSWYNRAGVERVMGFCTTQEYRRFL 126
Query 152 RQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDY 211
Q PIFE++L++DGI+LRKYWFSVSD EQ+RRF++R++DP+RQWKLSPMDL+S+ RWEDY
Sbjct 127 HQAPIFERLLVEDGIILRKYWFSVSDEEQIRRFQSRQSDPLRQWKLSPMDLQSITRWEDY 186
Query 212 SRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVS 271
SRAKDEM VHTD P +PWY VES+ KK +R+N++ HLL+TI + VEK K+P RP
Sbjct 187 SRAKDEMFVHTDIPSAPWYTVESEDKKRSRINVINHLLNTIPWEYVEKSVPKIPERPASD 246
Query 272 GNYRRPPRELSTYVDD 287
+Y RPPR YV D
Sbjct 247 SSYERPPRTQFRYVPD 262
>gi|319947779|ref|ZP_08021978.1| hypothetical protein ES5_00642 [Dietzia cinnamea P4]
gi|319438556|gb|EFV93477.1| hypothetical protein ES5_00642 [Dietzia cinnamea P4]
Length=286
Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 171/286 (60%), Positives = 219/286 (77%), Gaps = 2/286 (0%)
Query 8 VSTATNDGASSRAKGHRSAAPGRRKISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIF 67
+S + G K R + G K+ Y++EL RLQ E V++Q W R +G RLVV+F
Sbjct 1 MSDKKSSGKGGAKKKDRLPS-GLEKLPKKAYESELKRLQAELVEMQAWLRETGNRLVVVF 59
Query 68 EGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDR 127
EGRD AGKG AIKRIT+YLNPR AR+ ALPAPT+ +R QWY+QRYI H+PA GEIV+FDR
Sbjct 60 EGRDAAGKGSAIKRITQYLNPRHARVVALPAPTEVQRTQWYFQRYIEHMPAAGEIVIFDR 119
Query 128 SWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKAR 187
SWYNRAGVE+VMGFCT EY FL Q PIFE++L++DGI+LRKYWFSVSD EQ RRF++R
Sbjct 120 SWYNRAGVERVMGFCTTDEYRRFLHQAPIFERLLVEDGIMLRKYWFSVSDEEQERRFRSR 179
Query 188 RNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAH 247
+DP+R+WKLSPMDLES+ RWE+YSRAKDEM +HTD P +PW+ VES+ KK +R+N+++H
Sbjct 180 HSDPMRRWKLSPMDLESITRWEEYSRAKDEMFIHTDIPEAPWFTVESEDKKRSRINVISH 239
Query 248 LLSTIDYADVEKPKVKLPPRPLVSGNYRRPPRELSTYVDDYVATLI 293
LLST+ + +E P++++P RP +G Y RPPRE YV D A L+
Sbjct 240 LLSTVPWEQLEPPELEIPERPEGAG-YERPPREEFKYVPDVAARLL 284
Lambda K H
0.321 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 489554810128
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40