BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3246c
Length=228
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610382|ref|NP_217763.1| two component sensory transduction ... 452 2e-125
gi|15842835|ref|NP_337872.1| DNA-binding response regulator MtrA... 451 3e-125
gi|306790486|ref|ZP_07428808.1| two component system transcripti... 451 3e-125
gi|41409458|ref|NP_962294.1| hypothetical protein MAP3360c [Myco... 451 4e-125
gi|240172611|ref|ZP_04751270.1| DNA-binding response regulator M... 450 8e-125
gi|118618059|ref|YP_906391.1| two component sensory transduction... 449 2e-124
gi|15827334|ref|NP_301597.1| two-component response regulator [M... 446 2e-123
gi|254776645|ref|ZP_05218161.1| DNA-binding response regulator M... 446 2e-123
gi|183981321|ref|YP_001849612.1| two-component sensory transduct... 444 5e-123
gi|15866137|gb|AAL10207.1|AF410884_3 MtrA [Mycobacterium avium s... 444 6e-123
gi|29336923|sp|Q9CCJ2.2|MTRA_MYCLE RecName: Full=DNA-binding res... 442 2e-122
gi|169630671|ref|YP_001704320.1| DNA-binding response regulator ... 430 8e-119
gi|120402752|ref|YP_952581.1| two component transcriptional regu... 417 6e-115
gi|145225290|ref|YP_001135968.1| two component transcriptional r... 417 8e-115
gi|118467592|ref|YP_886240.1| DNA-binding response regulator Mtr... 417 9e-115
gi|108798318|ref|YP_638515.1| two component transcriptional regu... 414 6e-114
gi|333991626|ref|YP_004524240.1| two-component sensory transduct... 410 5e-113
gi|326383263|ref|ZP_08204951.1| response regulator receiver [Gor... 395 2e-108
gi|54026584|ref|YP_120826.1| putative two-component system respo... 383 1e-104
gi|109158123|pdb|2GWR|A Chain A, Crystal Structure Of The Respon... 383 1e-104
gi|262203510|ref|YP_003274718.1| response regulator receiver [Go... 382 2e-104
gi|333921449|ref|YP_004495030.1| DNA-binding response regulator ... 381 4e-104
gi|111023287|ref|YP_706259.1| response regulator, two-component ... 380 6e-104
gi|226305655|ref|YP_002765615.1| two-component response regulato... 379 3e-103
gi|256380300|ref|YP_003103960.1| winged helix family two compone... 377 9e-103
gi|312140675|ref|YP_004008011.1| two component system response r... 376 2e-102
gi|319949856|ref|ZP_08023868.1| DNA-binding response regulator M... 369 2e-100
gi|331698935|ref|YP_004335174.1| winged helix family two compone... 368 4e-100
gi|296138804|ref|YP_003646047.1| winged helix family two compone... 365 4e-99
gi|302530020|ref|ZP_07282362.1| phosphate regulon transcriptiona... 361 6e-98
gi|340531476|gb|AEK46681.1| two component transcriptional regula... 360 7e-98
gi|300789808|ref|YP_003770099.1| two-component system response r... 360 9e-98
gi|257057064|ref|YP_003134896.1| response regulator with CheY-li... 359 2e-97
gi|325002114|ref|ZP_08123226.1| two-component response regulator... 359 2e-97
gi|134102881|ref|YP_001108542.1| two-component response regulato... 358 2e-97
gi|296394611|ref|YP_003659495.1| transcriptional regulator [Segn... 354 5e-96
gi|317508033|ref|ZP_07965722.1| response regulator receiver doma... 352 2e-95
gi|302560333|ref|ZP_07312675.1| DNA-binding response regulator [... 350 9e-95
gi|291439275|ref|ZP_06578665.1| two-component system response re... 350 9e-95
gi|10281108|gb|AAG15433.1|AF189161_1 putative response regulator... 350 1e-94
gi|254392878|ref|ZP_05008047.1| two-component system response re... 349 1e-94
gi|21221456|ref|NP_627235.1| two-component system response regul... 349 1e-94
gi|294629682|ref|ZP_06708242.1| DNA-binding response regulator [... 349 2e-94
gi|302551833|ref|ZP_07304175.1| phosphate regulon transcriptiona... 349 2e-94
gi|291445133|ref|ZP_06584523.1| two-component system response re... 349 2e-94
gi|302534786|ref|ZP_07287128.1| phosphate regulon transcriptiona... 349 2e-94
gi|297194039|ref|ZP_06911437.1| two-component system response re... 349 2e-94
gi|182438316|ref|YP_001826035.1| putative two-component system r... 349 2e-94
gi|291009674|ref|ZP_06567647.1| two-component response regulator... 349 2e-94
gi|294812933|ref|ZP_06771576.1| Two-component system response re... 348 3e-94
>gi|15610382|ref|NP_217763.1| two component sensory transduction transcriptional regulatory
protein MTRA [Mycobacterium tuberculosis H37Rv]
gi|31794426|ref|NP_856919.1| two component sensory transduction transcriptional regulatory
protein MTRA [Mycobacterium bovis AF2122/97]
gi|121639135|ref|YP_979359.1| two component sensory transduction transcriptional regulatory
protein mtrA [Mycobacterium bovis BCG str. Pasteur 1173P2]
72 more sequence titles
Length=228
Score = 452 bits (1162), Expect = 2e-125, Method: Compositional matrix adjust.
Identities = 228/228 (100%), Positives = 228/228 (100%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP
Sbjct 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL
Sbjct 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE
Sbjct 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
>gi|15842835|ref|NP_337872.1| DNA-binding response regulator MtrA [Mycobacterium tuberculosis
CDC1551]
gi|13883164|gb|AAK47686.1| DNA-binding response regulator MtrA [Mycobacterium tuberculosis
CDC1551]
Length=235
Score = 451 bits (1161), Expect = 3e-125, Method: Compositional matrix adjust.
Identities = 228/228 (100%), Positives = 228/228 (100%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP
Sbjct 8 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 67
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL
Sbjct 68 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 127
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE
Sbjct 128 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 187
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
Sbjct 188 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 235
>gi|306790486|ref|ZP_07428808.1| two component system transcriptional regulator mtrA [Mycobacterium
tuberculosis SUMu004]
gi|308333099|gb|EFP21950.1| two component system transcriptional regulator mtrA [Mycobacterium
tuberculosis SUMu004]
Length=228
Score = 451 bits (1160), Expect = 3e-125, Method: Compositional matrix adjust.
Identities = 227/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M+TMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP
Sbjct 1 MNTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL
Sbjct 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE
Sbjct 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
>gi|41409458|ref|NP_962294.1| hypothetical protein MAP3360c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118464131|ref|YP_883351.1| DNA-binding response regulator MtrA [Mycobacterium avium 104]
gi|254822993|ref|ZP_05227994.1| DNA-binding response regulator MtrA [Mycobacterium intracellulare
ATCC 13950]
6 more sequence titles
Length=228
Score = 451 bits (1160), Expect = 4e-125, Method: Compositional matrix adjust.
Identities = 227/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
MD+MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP
Sbjct 1 MDSMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL
Sbjct 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE
Sbjct 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
>gi|240172611|ref|ZP_04751270.1| DNA-binding response regulator MtrA [Mycobacterium kansasii ATCC
12478]
Length=228
Score = 450 bits (1157), Expect = 8e-125, Method: Compositional matrix adjust.
Identities = 227/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP
Sbjct 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL
Sbjct 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRNDDEPAEMLSIADV+IDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE
Sbjct 121 RRNDDEPAEMLSIADVDIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
>gi|118618059|ref|YP_906391.1| two component sensory transduction transcriptional regulatory
protein MtrA [Mycobacterium ulcerans Agy99]
gi|118570169|gb|ABL04920.1| two component sensory transduction transcriptional regulatory
protein MtrA [Mycobacterium ulcerans Agy99]
Length=228
Score = 449 bits (1154), Expect = 2e-124, Method: Compositional matrix adjust.
Identities = 226/228 (99%), Positives = 227/228 (99%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP
Sbjct 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL
Sbjct 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRNDDEPAEMLSIADV+IDVPAHK TRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE
Sbjct 121 RRNDDEPAEMLSIADVDIDVPAHKATRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
>gi|15827334|ref|NP_301597.1| two-component response regulator [Mycobacterium leprae TN]
gi|221229812|ref|YP_002503228.1| putative two-component response regulator [Mycobacterium leprae
Br4923]
gi|13092883|emb|CAC30282.1| putative two-component response regulator [Mycobacterium leprae]
gi|219932919|emb|CAR70867.1| putative two-component response regulator [Mycobacterium leprae
Br4923]
Length=228
Score = 446 bits (1146), Expect = 2e-123, Method: Compositional matrix adjust.
Identities = 225/228 (99%), Positives = 226/228 (99%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
MD MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP
Sbjct 1 MDIMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL
Sbjct 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRNDDEPAEMLSIADV+IDVPAHKVTRNGE ISLTPLEFDLLVALARKPRQVFTRDVLLE
Sbjct 121 RRNDDEPAEMLSIADVDIDVPAHKVTRNGEHISLTPLEFDLLVALARKPRQVFTRDVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
>gi|254776645|ref|ZP_05218161.1| DNA-binding response regulator MtrA [Mycobacterium avium subsp.
avium ATCC 25291]
gi|45645201|sp|Q93CB8.2|MTRA_MYCPA RecName: Full=DNA-binding response regulator mtrA
gi|61228246|sp|P0A5Z4.1|MTRA_MYCTU RecName: Full=DNA-binding response regulator mtrA
gi|61228247|sp|P0A5Z5.1|MTRA_MYCBO RecName: Full=DNA-binding response regulator mtrA
gi|509815|gb|AAB07804.1| MtrA [Mycobacterium tuberculosis H37Rv]
gi|336459678|gb|EGO38613.1| response regulator with CheY-like receiver domain, winged-helix
DNA-binding domain protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=225
Score = 446 bits (1146), Expect = 2e-123, Method: Compositional matrix adjust.
Identities = 225/225 (100%), Positives = 225/225 (100%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN
Sbjct 1 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN
Sbjct 61 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW
Sbjct 121 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
Sbjct 181 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 225
>gi|183981321|ref|YP_001849612.1| two-component sensory transduction transcriptional regulatory
protein MtrA [Mycobacterium marinum M]
gi|183174647|gb|ACC39757.1| two-component sensory transduction transcriptional regulatory
protein MtrA [Mycobacterium marinum M]
Length=225
Score = 444 bits (1141), Expect = 5e-123, Method: Compositional matrix adjust.
Identities = 224/225 (99%), Positives = 225/225 (100%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN
Sbjct 1 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN
Sbjct 61 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
DDEPAEMLSIADV+IDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW
Sbjct 121 DDEPAEMLSIADVDIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
Sbjct 181 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 225
>gi|15866137|gb|AAL10207.1|AF410884_3 MtrA [Mycobacterium avium subsp. paratuberculosis]
Length=225
Score = 444 bits (1141), Expect = 6e-123, Method: Compositional matrix adjust.
Identities = 224/224 (100%), Positives = 224/224 (100%), Gaps = 0/224 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN
Sbjct 1 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN
Sbjct 61 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW
Sbjct 121 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP
Sbjct 181 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 224
>gi|29336923|sp|Q9CCJ2.2|MTRA_MYCLE RecName: Full=DNA-binding response regulator mtrA
Length=225
Score = 442 bits (1137), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 223/225 (99%), Positives = 224/225 (99%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN
Sbjct 1 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN
Sbjct 61 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
DDEPAEMLSIADV+IDVPAHKVTRNGE ISLTPLEFDLLVALARKPRQVFTRDVLLEQVW
Sbjct 121 DDEPAEMLSIADVDIDVPAHKVTRNGEHISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
Sbjct 181 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 225
>gi|169630671|ref|YP_001704320.1| DNA-binding response regulator MtrA [Mycobacterium abscessus
ATCC 19977]
gi|169242638|emb|CAM63666.1| DNA-binding response regulator MtrA [Mycobacterium abscessus]
Length=225
Score = 430 bits (1105), Expect = 8e-119, Method: Compositional matrix adjust.
Identities = 214/225 (96%), Positives = 222/225 (99%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
MRQRILVVDDDASLAEMLTIVLRGEGF+TAV+ DGTQALTAVRELRPDLVLLDLMLPGMN
Sbjct 1 MRQRILVVDDDASLAEMLTIVLRGEGFETAVVSDGTQALTAVRELRPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCRVLR+DSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVAR+RARLRRN
Sbjct 61 GIDVCRVLRSDSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARIRARLRRN 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
DDEPAE+L+IA ++IDVPAHKVTR GEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW
Sbjct 121 DDEPAELLNIAGIDIDVPAHKVTREGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
Sbjct 181 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 225
>gi|120402752|ref|YP_952581.1| two component transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|119955570|gb|ABM12575.1| two component transcriptional regulator, winged helix family
[Mycobacterium vanbaalenii PYR-1]
Length=228
Score = 417 bits (1072), Expect = 6e-115, Method: Compositional matrix adjust.
Identities = 221/228 (97%), Positives = 225/228 (99%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
MDTMRQRILVVDDD SLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP
Sbjct 1 MDTMRQRILVVDDDPSLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDY+MKPFKPKELVARVRARL
Sbjct 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYVMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRN+DEPAEMLSIAD++IDVPAHKVTR GEQISLTPLEFDLLVALARKPRQVFTRDVLLE
Sbjct 121 RRNEDEPAEMLSIADIDIDVPAHKVTRQGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENP VVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPQVVLTVRGVGYKAGPP 228
>gi|145225290|ref|YP_001135968.1| two component transcriptional regulator [Mycobacterium gilvum
PYR-GCK]
gi|315445587|ref|YP_004078466.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Mycobacterium sp. Spyr1]
gi|145217776|gb|ABP47180.1| two component transcriptional regulator, winged helix family
[Mycobacterium gilvum PYR-GCK]
gi|315263890|gb|ADU00632.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Mycobacterium sp. Spyr1]
Length=228
Score = 417 bits (1071), Expect = 8e-115, Method: Compositional matrix adjust.
Identities = 221/228 (97%), Positives = 225/228 (99%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
MD+MRQRILVVDDD SLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP
Sbjct 1 MDSMRQRILVVDDDPSLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDY+MKPFKPKELVARVRARL
Sbjct 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYVMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRN+DEPAEMLSIADV+IDVPAHKVTR GEQISLTPLEFDLLVALARKPRQVFTRDVLLE
Sbjct 121 RRNEDEPAEMLSIADVDIDVPAHKVTRQGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENP VVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPQVVLTVRGVGYKAGPP 228
>gi|118467592|ref|YP_886240.1| DNA-binding response regulator MtrA [Mycobacterium smegmatis
str. MC2 155]
gi|118168879|gb|ABK69775.1| DNA-binding response regulator MtrA [Mycobacterium smegmatis
str. MC2 155]
Length=228
Score = 417 bits (1071), Expect = 9e-115, Method: Compositional matrix adjust.
Identities = 221/228 (97%), Positives = 224/228 (99%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
MDTMRQRILVVDDD SLAEMLTIVLRGEGFDTAVIGDG+QALTAVRELRPDLVLLDLMLP
Sbjct 1 MDTMRQRILVVDDDPSLAEMLTIVLRGEGFDTAVIGDGSQALTAVRELRPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDY+MKPFKPKELVARVRARL
Sbjct 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYVMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRN+DEPAEMLSI DVEIDVPAHKVTR GEQISLTPLEFDLLVALARKPRQVFTRDVLLE
Sbjct 121 RRNEDEPAEMLSIGDVEIDVPAHKVTRQGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENP VVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPQVVLTVRGVGYKAGPP 228
>gi|108798318|ref|YP_638515.1| two component transcriptional regulator [Mycobacterium sp. MCS]
gi|119867415|ref|YP_937367.1| two component transcriptional regulator [Mycobacterium sp. KMS]
gi|126433983|ref|YP_001069674.1| two component transcriptional regulator [Mycobacterium sp. JLS]
gi|108768737|gb|ABG07459.1| two component transcriptional regulator, winged helix family
[Mycobacterium sp. MCS]
gi|119693504|gb|ABL90577.1| two component transcriptional regulator, winged helix family
[Mycobacterium sp. KMS]
gi|126233783|gb|ABN97183.1| two component transcriptional regulator, winged helix family
[Mycobacterium sp. JLS]
Length=228
Score = 414 bits (1063), Expect = 6e-114, Method: Compositional matrix adjust.
Identities = 218/228 (96%), Positives = 224/228 (99%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
MD+MRQRILVVDDD SLAEMLTIVLRGEGFDTAV+GDGTQAL+AVRELRPDLVLLDLMLP
Sbjct 1 MDSMRQRILVVDDDPSLAEMLTIVLRGEGFDTAVVGDGTQALSAVRELRPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDY+MKPFKPKELVARVRARL
Sbjct 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYVMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRN+DEPAE+LSI DVEIDVPAHKVTR GEQISLTPLEFDLLVALARKPRQVFTRDVLLE
Sbjct 121 RRNEDEPAELLSIGDVEIDVPAHKVTRQGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENP VVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPQVVLTVRGVGYKAGPP 228
>gi|333991626|ref|YP_004524240.1| two-component sensory transduction transcriptional regulatory
protein MtrA [Mycobacterium sp. JDM601]
gi|333487594|gb|AEF36986.1| two-component sensory transduction transcriptional regulatory
protein MtrA [Mycobacterium sp. JDM601]
Length=228
Score = 410 bits (1055), Expect = 5e-113, Method: Compositional matrix adjust.
Identities = 217/228 (96%), Positives = 223/228 (98%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M MRQRILVVDDDASLAEMLTIVLRGEGFDTAV+GDGTQALTAV ELRPDLVLLDLMLP
Sbjct 1 MYAMRQRILVVDDDASLAEMLTIVLRGEGFDTAVVGDGTQALTAVHELRPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVCRVLR DSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL
Sbjct 61 GMNGIDVCRVLRKDSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRNDDEPAEMLSIAD++IDVPAHKV+R GEQISLTPLEFDLLVALARKPRQVFTR+VLLE
Sbjct 121 RRNDDEPAEMLSIADIDIDVPAHKVSRGGEQISLTPLEFDLLVALARKPRQVFTREVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVE+DPENPTVVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEQDPENPTVVLTVRGVGYKAGPP 228
>gi|326383263|ref|ZP_08204951.1| response regulator receiver [Gordonia neofelifaecis NRRL B-59395]
gi|326198013|gb|EGD55199.1| response regulator receiver [Gordonia neofelifaecis NRRL B-59395]
Length=225
Score = 395 bits (1016), Expect = 2e-108, Method: Compositional matrix adjust.
Identities = 197/225 (88%), Positives = 214/225 (96%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ RILVVDDDA+LAEMLTIVL+ EGF+ V+GDGTQALTAVRE+RPDLVLLDLMLPGMN
Sbjct 1 MKPRILVVDDDAALAEMLTIVLKNEGFEPFVVGDGTQALTAVREVRPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCRVLR+DSGVPIVMLTAK+DTVDVVLGLESGADDY++KPFKPKELVAR+RARLRR
Sbjct 61 GIDVCRVLRSDSGVPIVMLTAKSDTVDVVLGLESGADDYMVKPFKPKELVARIRARLRRT 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
+D+PAE+L+I VEIDVPAHKVTR+G ISLTPLEFDLLVALARKPRQVFTRDVLLEQVW
Sbjct 121 EDDPAELLAIGPVEIDVPAHKVTRDGVPISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRHPADTRLVNVHVQRLRAKVE DPENP +VLTVRGVGYKAGPP
Sbjct 181 GYRHPADTRLVNVHVQRLRAKVEIDPENPEIVLTVRGVGYKAGPP 225
>gi|54026584|ref|YP_120826.1| putative two-component system response regulator [Nocardia farcinica
IFM 10152]
gi|54018092|dbj|BAD59462.1| putative two-component system response regulator [Nocardia farcinica
IFM 10152]
Length=225
Score = 383 bits (984), Expect = 1e-104, Method: Compositional matrix adjust.
Identities = 202/225 (90%), Positives = 215/225 (96%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ +ILVVDDD +LAEMLTIVLRGEGFD V+GDGTQAL AVRE+RPDLVLLDLMLPGMN
Sbjct 1 MKPKILVVDDDMALAEMLTIVLRGEGFDPHVVGDGTQALAAVREIRPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYI+KPFKPKELVARVRARLRR
Sbjct 61 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIVKPFKPKELVARVRARLRRT 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
++EPAE+LSIAD+ IDVPAHKVTR G+QISLTPLEFDLLVALARKPRQVFTR+VLLEQVW
Sbjct 121 EEEPAELLSIADIVIDVPAHKVTRGGQQISLTPLEFDLLVALARKPRQVFTREVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRH ADTRLVNVHVQRLRAKVEKDPENP +VLTVRGVGYKAGPP
Sbjct 181 GYRHAADTRLVNVHVQRLRAKVEKDPENPEIVLTVRGVGYKAGPP 225
>gi|109158123|pdb|2GWR|A Chain A, Crystal Structure Of The Response Regulator Protein
Mtra From Mycobacterium Tuberculosis
Length=238
Score = 383 bits (983), Expect = 1e-104, Method: Compositional matrix adjust.
Identities = 220/227 (97%), Positives = 220/227 (97%), Gaps = 0/227 (0%)
Query 2 DTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPG 61
DT RQRILVVDDDASLAE LTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDL LPG
Sbjct 2 DTXRQRILVVDDDASLAEXLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLXLPG 61
Query 62 MNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLR 121
NGIDVCRVLRADSGVPIV LTAKTDTVDVVLGLESGADDYI KPFKPKELVARVRARLR
Sbjct 62 XNGIDVCRVLRADSGVPIVXLTAKTDTVDVVLGLESGADDYIXKPFKPKELVARVRARLR 121
Query 122 RNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQ 181
RNDDEPAE LSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQ
Sbjct 122 RNDDEPAEXLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQ 181
Query 182 VWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
VWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
Sbjct 182 VWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
>gi|262203510|ref|YP_003274718.1| response regulator receiver [Gordonia bronchialis DSM 43247]
gi|343927671|ref|ZP_08767139.1| two-component response regulator MtrA [Gordonia alkanivorans
NBRC 16433]
gi|262086857|gb|ACY22825.1| response regulator receiver [Gordonia bronchialis DSM 43247]
gi|343762312|dbj|GAA14065.1| two-component response regulator MtrA [Gordonia alkanivorans
NBRC 16433]
Length=225
Score = 382 bits (982), Expect = 2e-104, Method: Compositional matrix adjust.
Identities = 204/225 (91%), Positives = 215/225 (96%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ RILVVDDDA+LAEMLTIVLRGEGF+ V+GDGTQALTAVRE+RPDLVLLDLMLPGMN
Sbjct 1 MKPRILVVDDDAALAEMLTIVLRGEGFEPFVVGDGTQALTAVREIRPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCRVLRADSGVPIVMLTAK+DTVDVVLGLESGADDY++KPFKPKELVARVRARLRR
Sbjct 61 GIDVCRVLRADSGVPIVMLTAKSDTVDVVLGLESGADDYMVKPFKPKELVARVRARLRRT 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
D+EPAE+LSI VEIDVPAHKVTR+G ISLTPLEFDLLVALARKPRQVFTRDVLLEQVW
Sbjct 121 DEEPAELLSIGPVEIDVPAHKVTRDGVPISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRHPADTRLVNVHVQRLRAKVE DPENP VVLTVRGVGYKAGPP
Sbjct 181 GYRHPADTRLVNVHVQRLRAKVETDPENPEVVLTVRGVGYKAGPP 225
>gi|333921449|ref|YP_004495030.1| DNA-binding response regulator MtrA [Amycolicicoccus subflavus
DQS3-9A1]
gi|333483670|gb|AEF42230.1| DNA-binding response regulator MtrA [Amycolicicoccus subflavus
DQS3-9A1]
Length=227
Score = 381 bits (979), Expect = 4e-104, Method: Compositional matrix adjust.
Identities = 204/226 (91%), Positives = 215/226 (96%), Gaps = 0/226 (0%)
Query 3 TMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGM 62
M+ +ILVVDDDA+LAEMLTIVLRGEGF+ VIGDGTQAL+AVRE+RPDLVLLDLMLPGM
Sbjct 2 NMKPKILVVDDDAALAEMLTIVLRGEGFEPYVIGDGTQALSAVREIRPDLVLLDLMLPGM 61
Query 63 NGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR 122
NGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDY++KPFKPKELVARVRARLRR
Sbjct 62 NGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYVIKPFKPKELVARVRARLRR 121
Query 123 NDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQV 182
DDEPAE+LSI D+EIDVPAHKVTR GEQISLTPLEFDLLVALARKPRQVFTR+VLLEQV
Sbjct 122 RDDEPAELLSIGDIEIDVPAHKVTREGEQISLTPLEFDLLVALARKPRQVFTREVLLEQV 181
Query 183 WGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
WGYRH ADTRLVNVHVQRLRAKVE DPE P VVLTVRGVGYKAGPP
Sbjct 182 WGYRHAADTRLVNVHVQRLRAKVENDPEKPEVVLTVRGVGYKAGPP 227
>gi|111023287|ref|YP_706259.1| response regulator, two-component system [Rhodococcus jostii
RHA1]
gi|226365794|ref|YP_002783577.1| two-component response regulator MtrA [Rhodococcus opacus B4]
gi|110822817|gb|ABG98101.1| response regulator, two-component system [Rhodococcus jostii
RHA1]
gi|226244284|dbj|BAH54632.1| two-component response regulator MtrA [Rhodococcus opacus B4]
Length=225
Score = 380 bits (977), Expect = 6e-104, Method: Compositional matrix adjust.
Identities = 204/225 (91%), Positives = 212/225 (95%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ RILVVDDD +LAEMLTIVLRGEGFD V+GDGTQALTAVRE RPDLVLLDLMLPGMN
Sbjct 1 MKPRILVVDDDTALAEMLTIVLRGEGFDPYVVGDGTQALTAVRETRPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR
Sbjct 61 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRT 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
+DEPAE+LSIAD+ IDVPAHKV+R E ISLTPLEFDLLVALARKPRQVFTR+VLLEQVW
Sbjct 121 EDEPAELLSIADIVIDVPAHKVSRGEELISLTPLEFDLLVALARKPRQVFTREVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRH ADTRLVNVHVQRLRAKVE DPENP VVLTVRGVGYKAGPP
Sbjct 181 GYRHAADTRLVNVHVQRLRAKVETDPENPEVVLTVRGVGYKAGPP 225
>gi|226305655|ref|YP_002765615.1| two-component response regulator MtrA [Rhodococcus erythropolis
PR4]
gi|229489658|ref|ZP_04383521.1| response regulator, two-component system [Rhodococcus erythropolis
SK121]
gi|226184772|dbj|BAH32876.1| two-component response regulator MtrA [Rhodococcus erythropolis
PR4]
gi|229323755|gb|EEN89513.1| response regulator, two-component system [Rhodococcus erythropolis
SK121]
Length=225
Score = 379 bits (972), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 202/225 (90%), Positives = 211/225 (94%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ RILVVDDD +LAEMLTIVLRGEGFD V+GDGT AL AVRE RPDLVLLDLMLPGMN
Sbjct 1 MKPRILVVDDDTALAEMLTIVLRGEGFDPYVVGDGTLALAAVRETRPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR
Sbjct 61 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRT 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
++EPAE+LSIAD+ IDVPAHKV+R EQISLTPLEFDLLVALARKPRQVFTR+VLLEQVW
Sbjct 121 EEEPAELLSIADIVIDVPAHKVSRGSEQISLTPLEFDLLVALARKPRQVFTREVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRH ADTRLVNVHVQRLRAKVE DPENP VVLTVRGVGYKAGPP
Sbjct 181 GYRHAADTRLVNVHVQRLRAKVETDPENPEVVLTVRGVGYKAGPP 225
>gi|256380300|ref|YP_003103960.1| winged helix family two component transcriptional regulator [Actinosynnema
mirum DSM 43827]
gi|255924603|gb|ACU40114.1| two component transcriptional regulator, winged helix family
[Actinosynnema mirum DSM 43827]
Length=261
Score = 377 bits (967), Expect = 9e-103, Method: Compositional matrix adjust.
Identities = 184/228 (81%), Positives = 208/228 (92%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M TM+ R+LVVDDD +LAEMLTIVLRGEGFDTAV+ DG +AL A+REL+PDLVLLDLMLP
Sbjct 34 MFTMKARVLVVDDDPALAEMLTIVLRGEGFDTAVVADGARALPALRELKPDLVLLDLMLP 93
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVC+ +R++SGVPIVMLTAK+DTVDVVLGLESGADDY++KPFKPKELVAR+RAR+
Sbjct 94 GMNGIDVCKAIRSESGVPIVMLTAKSDTVDVVLGLESGADDYVVKPFKPKELVARIRARM 153
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR + EPAE+L I D+ IDVP H+V R G I LTPLEFDLLVALARKPRQVFTR+VLLE
Sbjct 154 RRTEAEPAEVLQIGDLTIDVPGHEVLREGRPIQLTPLEFDLLVALARKPRQVFTREVLLE 213
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRH ADTRLVNVHVQRLR+KVE+DPE+P VVLTVRGVGYKAGPP
Sbjct 214 QVWGYRHAADTRLVNVHVQRLRSKVERDPEHPEVVLTVRGVGYKAGPP 261
>gi|312140675|ref|YP_004008011.1| two component system response regulator mtra [Rhodococcus equi
103S]
gi|325675695|ref|ZP_08155379.1| DNA-binding response regulator [Rhodococcus equi ATCC 33707]
gi|311890014|emb|CBH49332.1| two component system response regulator MtrA [Rhodococcus equi
103S]
gi|325553666|gb|EGD23344.1| DNA-binding response regulator [Rhodococcus equi ATCC 33707]
Length=225
Score = 376 bits (965), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 200/225 (89%), Positives = 212/225 (95%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ RILVVDDD +LAEMLTIVLRGEGF+ V+GDG+QALTAVRE RPDLVLLDLMLPGMN
Sbjct 1 MKPRILVVDDDTALAEMLTIVLRGEGFEPYVVGDGSQALTAVRETRPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCRVLRA+SGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR
Sbjct 61 GIDVCRVLRAESGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRT 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
++EPAE+LSI D+ IDVPAHKVTR+ ISLTPLEFDLLVALARKPRQVFTR+VLLEQVW
Sbjct 121 EEEPAEVLSIGDIMIDVPAHKVTRDNALISLTPLEFDLLVALARKPRQVFTREVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRH ADTRLVNVHVQRLRAKVEKDPENP VVLTVRGVGYKAGPP
Sbjct 181 GYRHAADTRLVNVHVQRLRAKVEKDPENPEVVLTVRGVGYKAGPP 225
>gi|319949856|ref|ZP_08023868.1| DNA-binding response regulator MtrA [Dietzia cinnamea P4]
gi|319436481|gb|EFV91589.1| DNA-binding response regulator MtrA [Dietzia cinnamea P4]
Length=226
Score = 369 bits (946), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 183/224 (82%), Positives = 200/224 (90%), Gaps = 0/224 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M +ILVVDDDA+LAEMLTIVLRGEGF+T ++GDG QA+ R ++PDLVLLDLMLPG +
Sbjct 1 MTPKILVVDDDAALAEMLTIVLRGEGFETEIVGDGVQAIETFRAVQPDLVLLDLMLPGKS 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCR +RA+S VPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVAR+RARLRR
Sbjct 61 GIDVCREIRAESRVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARIRARLRRG 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
+DEP+E L I DV IDVPAH VTR+G I LTPLEFDLLV LARKPRQVFTR+VLLE VW
Sbjct 121 EDEPSETLHIGDVTIDVPAHTVTRDGTPIPLTPLEFDLLVELARKPRQVFTREVLLEHVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
GYRH ADTRLVNVHVQRLRAK+EKDPENP VVLTVRGVGYKAGP
Sbjct 181 GYRHSADTRLVNVHVQRLRAKIEKDPENPEVVLTVRGVGYKAGP 224
>gi|331698935|ref|YP_004335174.1| winged helix family two component transcriptional regulator [Pseudonocardia
dioxanivorans CB1190]
gi|326953624|gb|AEA27321.1| two component transcriptional regulator, winged helix family
[Pseudonocardia dioxanivorans CB1190]
Length=225
Score = 368 bits (945), Expect = 4e-100, Method: Compositional matrix adjust.
Identities = 189/225 (84%), Positives = 213/225 (95%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ R+LVVDDD +LAEMLTIVLRGEGFDTAV+GDGT+AL AVRELRPD+VLLDLMLPGMN
Sbjct 1 MKSRVLVVDDDPALAEMLTIVLRGEGFDTAVVGDGTKALPAVRELRPDVVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCR +R++SGVPIVMLTAK+DTVD+VLGLESGADDY++KPFKPKELVAR+RAR+RR
Sbjct 61 GIDVCRAIRSESGVPIVMLTAKSDTVDIVLGLESGADDYVVKPFKPKELVARIRARVRRV 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
++EPAE LSI DV+IDVPAH+VTR G I+LTPLEFDLLVALARKPRQVFTR+VLLEQVW
Sbjct 121 ENEPAEQLSIGDVDIDVPAHQVTRGGVPIALTPLEFDLLVALARKPRQVFTREVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRH ADTRLVNVHVQRLR+KVE+DPE+P VVLTVRGVGYKAGPP
Sbjct 181 GYRHAADTRLVNVHVQRLRSKVERDPEHPEVVLTVRGVGYKAGPP 225
>gi|296138804|ref|YP_003646047.1| winged helix family two component transcriptional regulator [Tsukamurella
paurometabola DSM 20162]
gi|296026938|gb|ADG77708.1| two component transcriptional regulator, winged helix family
[Tsukamurella paurometabola DSM 20162]
Length=228
Score = 365 bits (936), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 190/227 (84%), Positives = 208/227 (92%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
MD+M+ RILV+DDD +LAEMLTIVLR EGFD+ V+GDGTQAL A RE RPDLVLLDLMLP
Sbjct 1 MDSMKPRILVIDDDPALAEMLTIVLRNEGFDSMVVGDGTQALGAAREFRPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDV RVLRADS VPIVMLTAK DTVDVVLGLESGADDY++KPFKPKELVARVRARL
Sbjct 61 GMNGIDVARVLRADSNVPIVMLTAKADTVDVVLGLESGADDYVIKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR DEP+E+LSI +V IDVPAHKVTR+GE + LTP EFDLLV +ARKPRQVFTRDVLLE
Sbjct 121 RRTADEPSELLSIGNVIIDVPAHKVTRDGEVVPLTPTEFDLLVTMARKPRQVFTRDVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRHPADTRLVNVH+QRLRAK+EKDPENP +VLT+RGVGYKAGP
Sbjct 181 QVWGYRHPADTRLVNVHIQRLRAKIEKDPENPEIVLTLRGVGYKAGP 227
>gi|302530020|ref|ZP_07282362.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
sp. AA4]
gi|302438915|gb|EFL10731.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
sp. AA4]
Length=227
Score = 361 bits (926), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 185/225 (83%), Positives = 210/225 (94%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ R+LVVDDD +LAEMLTIVLRGEGFDTAV+ DG++AL A+REL+PDLVLLDLMLPGMN
Sbjct 3 MKARVLVVDDDPALAEMLTIVLRGEGFDTAVVADGSRALPALRELKPDLVLLDLMLPGMN 62
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVC+ +RA+SGVPIVMLTAK+DTVD+VLGLESGADDY++KPFKPKELVARVRAR+RR
Sbjct 63 GIDVCKAIRAESGVPIVMLTAKSDTVDIVLGLESGADDYVVKPFKPKELVARVRARMRRT 122
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
+ EPAE L+I D+ IDVP H+VTR+G+ I LTPLEFDLLVALARKPRQVFTR+VLLEQVW
Sbjct 123 EAEPAESLTIGDLAIDVPGHEVTRDGKAIPLTPLEFDLLVALARKPRQVFTREVLLEQVW 182
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRH ADTRLVNVHVQRLR+KVEKDPE+P VVLTVRGVGYKAGPP
Sbjct 183 GYRHAADTRLVNVHVQRLRSKVEKDPEHPEVVLTVRGVGYKAGPP 227
>gi|340531476|gb|AEK46681.1| two component transcriptional regulator, winged helix family
protein [Amycolatopsis mediterranei S699]
Length=225
Score = 360 bits (925), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 185/225 (83%), Positives = 209/225 (93%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ R+LVVDDD +LAEMLTIVLRGEGFDTAV+ DG++AL A+REL+PDLVLLDLMLPGMN
Sbjct 1 MKARVLVVDDDPALAEMLTIVLRGEGFDTAVVADGSRALPALRELKPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVC+ +RA+SGVPIVMLTAK+DTVD+VLGLESGADDY++KPFKPKELVARVRAR+RR
Sbjct 61 GIDVCKAIRAESGVPIVMLTAKSDTVDIVLGLESGADDYVVKPFKPKELVARVRARMRRT 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
+ EPAE L+I D+ IDVP H+VTR G+ I LTPLEFDLLVALARKPRQVFTR+VLLEQVW
Sbjct 121 EAEPAESLTIGDLAIDVPGHEVTREGKAIPLTPLEFDLLVALARKPRQVFTREVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRH ADTRLVNVHVQRLR+KVEKDPE+P VVLTVRGVGYKAGPP
Sbjct 181 GYRHAADTRLVNVHVQRLRSKVEKDPEHPEVVLTVRGVGYKAGPP 225
>gi|300789808|ref|YP_003770099.1| two-component system response regulator [Amycolatopsis mediterranei
U32]
gi|299799322|gb|ADJ49697.1| two-component system response regulator [Amycolatopsis mediterranei
U32]
Length=227
Score = 360 bits (924), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 185/225 (83%), Positives = 209/225 (93%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ R+LVVDDD +LAEMLTIVLRGEGFDTAV+ DG++AL A+REL+PDLVLLDLMLPGMN
Sbjct 3 MKARVLVVDDDPALAEMLTIVLRGEGFDTAVVADGSRALPALRELKPDLVLLDLMLPGMN 62
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVC+ +RA+SGVPIVMLTAK+DTVD+VLGLESGADDY++KPFKPKELVARVRAR+RR
Sbjct 63 GIDVCKAIRAESGVPIVMLTAKSDTVDIVLGLESGADDYVVKPFKPKELVARVRARMRRT 122
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
+ EPAE L+I D+ IDVP H+VTR G+ I LTPLEFDLLVALARKPRQVFTR+VLLEQVW
Sbjct 123 EAEPAESLTIGDLAIDVPGHEVTREGKAIPLTPLEFDLLVALARKPRQVFTREVLLEQVW 182
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRH ADTRLVNVHVQRLR+KVEKDPE+P VVLTVRGVGYKAGPP
Sbjct 183 GYRHAADTRLVNVHVQRLRSKVEKDPEHPEVVLTVRGVGYKAGPP 227
>gi|257057064|ref|YP_003134896.1| response regulator with CheY-like receiver domain-containing
protein and winged-helix DNA-binding domain-containing protein
[Saccharomonospora viridis DSM 43017]
gi|256586936|gb|ACU98069.1| response regulator with CheY-like receiver domain protein and
winged-helix DNA-binding domain protein [Saccharomonospora
viridis DSM 43017]
Length=225
Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/225 (83%), Positives = 210/225 (94%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ R+LVVDDD +LAEMLTIVLRGEGFDTAV+ DG++AL A+REL+PDLVLLDLMLPGMN
Sbjct 1 MKARVLVVDDDPALAEMLTIVLRGEGFDTAVVSDGSRALPALRELKPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVC+ +RA+SGVPIVMLTAK+DTVD+VLGLESGADDY++KPFKPKELVARVRARLRR
Sbjct 61 GIDVCKAIRAESGVPIVMLTAKSDTVDIVLGLESGADDYVVKPFKPKELVARVRARLRRT 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
+ EPAE L+I D+ IDVP H+VTR+G+ I LTPLEFDLLVALARKPRQVFTR+VLLEQVW
Sbjct 121 ESEPAETLTIGDLTIDVPGHEVTRDGKAIPLTPLEFDLLVALARKPRQVFTREVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRH ADTRLVNVHVQRLR+KVEKDPE+P VVLTVRGVGYKAGPP
Sbjct 181 GYRHAADTRLVNVHVQRLRSKVEKDPEHPEVVLTVRGVGYKAGPP 225
>gi|325002114|ref|ZP_08123226.1| two-component response regulator [Pseudonocardia sp. P1]
Length=225
Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/225 (82%), Positives = 210/225 (94%), Gaps = 0/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ R+LVVDDD +LAEMLTIVLRGEGF+TAV+ DGT+AL AVR+++PD+VLLDLMLPGMN
Sbjct 1 MKSRVLVVDDDPALAEMLTIVLRGEGFETAVVSDGTRALPAVRDMQPDVVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVCR +RA+SGVPIVMLTAK+DTVDVVLGLESGADDY++KPFKPKELVAR+RAR+RR
Sbjct 61 GIDVCRAIRAESGVPIVMLTAKSDTVDVVLGLESGADDYVVKPFKPKELVARIRARVRRI 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
+ EPAE LSI +++IDVPAH+VTR G I+LTPLEFDLLVALARKPRQVFTR+VLLEQVW
Sbjct 121 ETEPAEQLSIGEIDIDVPAHQVTRGGRPIALTPLEFDLLVALARKPRQVFTREVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRH ADTRLVNVHVQRLR+KVE+DPE P VVLTVRGVGYKAGPP
Sbjct 181 GYRHAADTRLVNVHVQRLRSKVERDPERPEVVLTVRGVGYKAGPP 225
>gi|134102881|ref|YP_001108542.1| two-component response regulator [Saccharopolyspora erythraea
NRRL 2338]
gi|133915504|emb|CAM05617.1| two-component response regulator [Saccharopolyspora erythraea
NRRL 2338]
Length=228
Score = 358 bits (920), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/228 (82%), Positives = 210/228 (93%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M M+ R+LVVDDD +LAEMLTIVLRGEGF+TAV+ DGT+A+ A+REL+PDLVLLDLMLP
Sbjct 1 MWGMKARVLVVDDDPALAEMLTIVLRGEGFETAVVSDGTKAMPALRELKPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
GMNGIDVC+ +R +S VPIVMLTAK+DTVDVVLGLESGADDY++KPFKPKELVAR+RARL
Sbjct 61 GMNGIDVCKAIRTESVVPIVMLTAKSDTVDVVLGLESGADDYVVKPFKPKELVARLRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR D EPAE+LSI D+ IDVP H+VTR+G+ I+LTPLEFDLLVALARKPRQVFTR+VLLE
Sbjct 121 RRTDAEPAEVLSIGDLTIDVPGHEVTRDGQPIALTPLEFDLLVALARKPRQVFTREVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRH ADTRLVNVHVQRLR+KVE+DPE P VVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHAADTRLVNVHVQRLRSKVERDPERPEVVLTVRGVGYKAGPP 228
>gi|296394611|ref|YP_003659495.1| transcriptional regulator [Segniliparus rotundus DSM 44985]
gi|296181758|gb|ADG98664.1| two component transcriptional regulator, winged helix family
[Segniliparus rotundus DSM 44985]
Length=228
Score = 354 bits (909), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 189/228 (83%), Positives = 209/228 (92%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M+ MRQRILVVDDD +LAEMLTIVLRGEGFD V+ DGT+ L AVRELRPDLVLLD+MLP
Sbjct 1 MNAMRQRILVVDDDVALAEMLTIVLRGEGFDPVVVSDGTKVLPAVRELRPDLVLLDVMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G+NGIDVCR +RA+SGVPIVMLTA+TDT+DVV+GLESGADDY+MKPFKPKELVARVRARL
Sbjct 61 GLNGIDVCRQVRAESGVPIVMLTARTDTIDVVVGLESGADDYVMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRN+ E+L+I DVEIDV AH+V+R + ISLTPLEFDLLVALARKPRQVFTR+VLLE
Sbjct 121 RRNEVAAPEVLTIDDVEIDVLAHRVSRGDQIISLTPLEFDLLVALARKPRQVFTREVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDP+ P VVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPDAPRVVLTVRGVGYKAGPP 228
>gi|317508033|ref|ZP_07965722.1| response regulator receiver domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
gi|316253672|gb|EFV13053.1| response regulator receiver domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
Length=228
Score = 352 bits (903), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/228 (83%), Positives = 209/228 (92%), Gaps = 0/228 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M+ MRQRILVVDDD +LAEMLTIVLRGEGFD V+ DG++ L AVRELRPDLVLLD+MLP
Sbjct 1 MNPMRQRILVVDDDVALAEMLTIVLRGEGFDPVVVSDGSKVLPAVRELRPDLVLLDVMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G+NGIDVCR +RA+SGVPIVMLTA+TDT+DVV+GLESGADDY+MKPFKPKELVARVRARL
Sbjct 61 GLNGIDVCRQVRAESGVPIVMLTARTDTIDVVVGLESGADDYVMKPFKPKELVARVRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RRN+ E+L+I DVEIDV AH+V+R + ISLTPLEFDLLVALARKPRQVFTR+VLLE
Sbjct 121 RRNEVAAPEVLTIDDVEIDVLAHRVSRADQIISLTPLEFDLLVALARKPRQVFTREVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
QVWGYRHPADTRLVNVHVQRLRAKVEKDP+ P VVLTVRGVGYKAGPP
Sbjct 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPDAPRVVLTVRGVGYKAGPP 228
>gi|302560333|ref|ZP_07312675.1| DNA-binding response regulator [Streptomyces griseoflavus Tu4000]
gi|302477951|gb|EFL41044.1| DNA-binding response regulator [Streptomyces griseoflavus Tu4000]
Length=229
Score = 350 bits (898), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 170/227 (75%), Positives = 200/227 (89%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M M+ R+LVVDDD++LAEML IVLRGEGF+ + + DG +AL A RE +PDLVLLDLMLP
Sbjct 2 MSFMKGRVLVVDDDSALAEMLGIVLRGEGFEPSFVADGDKALAAFREAKPDLVLLDLMLP 61
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G +GI+VCR++RA+SGVPIVMLTAK+DTVDVV+GLESGADDYI+KPFKPKELVAR+RARL
Sbjct 62 GRDGIEVCRLIRAESGVPIVMLTAKSDTVDVVVGLESGADDYIVKPFKPKELVARIRARL 121
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR+++ E L+I D+ IDV H V R+G+ I+LTPLEFDLLVALARKP QVFTR+VLLE
Sbjct 122 RRSEEPAPEQLAIGDLVIDVAGHSVKRDGQSIALTPLEFDLLVALARKPWQVFTREVLLE 181
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRH ADTRLVNVHVQRLR+KVEKDPE P +V+TVRGVGYKAGP
Sbjct 182 QVWGYRHAADTRLVNVHVQRLRSKVEKDPEKPEIVVTVRGVGYKAGP 228
>gi|291439275|ref|ZP_06578665.1| two-component system response regulator [Streptomyces ghanaensis
ATCC 14672]
gi|291342170|gb|EFE69126.1| two-component system response regulator [Streptomyces ghanaensis
ATCC 14672]
Length=229
Score = 350 bits (898), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 170/227 (75%), Positives = 200/227 (89%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M M+ R+LVVDDD++LAEML IVLRGEGF+ + + DG +AL A RE +PDLVLLDLMLP
Sbjct 2 MSFMKGRVLVVDDDSALAEMLGIVLRGEGFEPSFVADGDKALAAFRETKPDLVLLDLMLP 61
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G +GI+VCR++RA+SGVPIVMLTAK+DTVDVV+GLESGADDYI+KPFKPKELVAR+RARL
Sbjct 62 GRDGIEVCRLIRAESGVPIVMLTAKSDTVDVVVGLESGADDYIVKPFKPKELVARIRARL 121
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR+++ E L+I D+ IDV H V R+G+ I+LTPLEFDLLVALARKP QVFTR+VLLE
Sbjct 122 RRSEEPAPEQLAIGDLVIDVAGHSVKRDGQSIALTPLEFDLLVALARKPWQVFTREVLLE 181
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRH ADTRLVNVHVQRLR+KVEKDPE P +V+TVRGVGYKAGP
Sbjct 182 QVWGYRHAADTRLVNVHVQRLRSKVEKDPEKPEIVVTVRGVGYKAGP 228
>gi|10281108|gb|AAG15433.1|AF189161_1 putative response regulator [Streptomyces coelicolor]
Length=228
Score = 350 bits (897), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/227 (75%), Positives = 199/227 (88%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M M+ R+LVVDDD +LAEML IVLRGEGF+ + + DG +AL A RE +PDLVLLDLMLP
Sbjct 1 MSFMKGRVLVVDDDTALAEMLGIVLRGEGFEPSFVADGDKALAAFRETKPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G +GI+VCR++RA+SGVPIVMLTAK+DTVDVV+GLESGADDYI+KPFKPKELVAR+RARL
Sbjct 61 GRDGIEVCRLIRAESGVPIVMLTAKSDTVDVVVGLESGADDYIVKPFKPKELVARIRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR+++ E L+I D+ IDV H V R+G+ I+LTPLEFDLLVALARKP QVFTR+VLLE
Sbjct 121 RRSEEPAPEQLAIGDLVIDVAGHSVKRDGQSIALTPLEFDLLVALARKPWQVFTREVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRH ADTRLVNVHVQRLR+KVEKDPE P +V+TVRGVGYKAGP
Sbjct 181 QVWGYRHAADTRLVNVHVQRLRSKVEKDPEKPEIVVTVRGVGYKAGP 227
>gi|254392878|ref|ZP_05008047.1| two-component system response regulator [Streptomyces clavuligerus
ATCC 27064]
gi|197706534|gb|EDY52346.1| two-component system response regulator [Streptomyces clavuligerus
ATCC 27064]
Length=229
Score = 349 bits (896), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/227 (75%), Positives = 199/227 (88%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M M+ R+LVVDDD +LAEML IVLRGEGF+ + + DG +AL A RE +PDLVLLDLMLP
Sbjct 2 MSIMKGRVLVVDDDTALAEMLGIVLRGEGFEPSFVADGDKALAAFREAKPDLVLLDLMLP 61
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G +GI+VCR++RA+SGVPIVMLTAK+DTVDVV+GLESGADDYI+KPFKPKELVAR+RARL
Sbjct 62 GRDGIEVCRLIRAESGVPIVMLTAKSDTVDVVVGLESGADDYIIKPFKPKELVARIRARL 121
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR+++ E L+I D+ IDV H V R+G+ I+LTPLEFDLLVALARKP QVFTR+VLLE
Sbjct 122 RRSEEPAPEQLTIGDLVIDVAGHSVKRDGQSIALTPLEFDLLVALARKPWQVFTREVLLE 181
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRH ADTRLVNVHVQRLR+KVEKDPE P +V+TVRGVGYKAGP
Sbjct 182 QVWGYRHAADTRLVNVHVQRLRSKVEKDPERPEIVVTVRGVGYKAGP 228
>gi|21221456|ref|NP_627235.1| two-component system response regulator [Streptomyces coelicolor
A3(2)]
gi|289771258|ref|ZP_06530636.1| two-component system response regulator [Streptomyces lividans
TK24]
gi|7799208|emb|CAB90924.1| putative two-component system response regulator [Streptomyces
coelicolor A3(2)]
gi|289701457|gb|EFD68886.1| two-component system response regulator [Streptomyces lividans
TK24]
Length=229
Score = 349 bits (896), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/227 (75%), Positives = 199/227 (88%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M M+ R+LVVDDD +LAEML IVLRGEGF+ + + DG +AL A RE +PDLVLLDLMLP
Sbjct 2 MSFMKGRVLVVDDDTALAEMLGIVLRGEGFEPSFVADGDKALAAFRETKPDLVLLDLMLP 61
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G +GI+VCR++RA+SGVPIVMLTAK+DTVDVV+GLESGADDYI+KPFKPKELVAR+RARL
Sbjct 62 GRDGIEVCRLIRAESGVPIVMLTAKSDTVDVVVGLESGADDYIVKPFKPKELVARIRARL 121
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR+++ E L+I D+ IDV H V R+G+ I+LTPLEFDLLVALARKP QVFTR+VLLE
Sbjct 122 RRSEEPAPEQLAIGDLVIDVAGHSVKRDGQSIALTPLEFDLLVALARKPWQVFTREVLLE 181
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRH ADTRLVNVHVQRLR+KVEKDPE P +V+TVRGVGYKAGP
Sbjct 182 QVWGYRHAADTRLVNVHVQRLRSKVEKDPEKPEIVVTVRGVGYKAGP 228
>gi|294629682|ref|ZP_06708242.1| DNA-binding response regulator [Streptomyces sp. e14]
gi|292833015|gb|EFF91364.1| DNA-binding response regulator [Streptomyces sp. e14]
Length=229
Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/227 (75%), Positives = 199/227 (88%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M M+ R+LVVDDD +LAEML IVLRGEGF+ + + DG +AL A RE +PDLVLLDLMLP
Sbjct 2 MSFMKGRVLVVDDDTALAEMLGIVLRGEGFEPSFVADGDKALAAFREAKPDLVLLDLMLP 61
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G +GI+VCR++RA+SGVPIVMLTAK+DTVDVV+GLESGADDYI+KPFKPKELVAR+RARL
Sbjct 62 GRDGIEVCRLIRAESGVPIVMLTAKSDTVDVVVGLESGADDYIVKPFKPKELVARIRARL 121
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR+++ E L+I D+ IDV H V R+G+ I+LTPLEFDLLVALARKP QVFTR+VLLE
Sbjct 122 RRSEEPAPEQLAIGDLVIDVAGHSVKRDGQSIALTPLEFDLLVALARKPWQVFTREVLLE 181
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRH ADTRLVNVHVQRLR+KVEKDPE P +V+TVRGVGYKAGP
Sbjct 182 QVWGYRHAADTRLVNVHVQRLRSKVEKDPEKPEIVVTVRGVGYKAGP 228
>gi|302551833|ref|ZP_07304175.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
viridochromogenes DSM 40736]
gi|302469451|gb|EFL32544.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
viridochromogenes DSM 40736]
Length=229
Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/227 (75%), Positives = 199/227 (88%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M M+ R+LVVDDD +LAEML IVLRGEGF+ + + DG +AL A RE +PDLVLLDLMLP
Sbjct 2 MSFMKGRVLVVDDDTALAEMLGIVLRGEGFEPSFVADGDKALAAFRESKPDLVLLDLMLP 61
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G +GI+VCR++RA+SGVPIVMLTAK+DTVDVV+GLESGADDYI+KPFKPKELVAR+RARL
Sbjct 62 GRDGIEVCRLIRAESGVPIVMLTAKSDTVDVVVGLESGADDYIVKPFKPKELVARIRARL 121
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR+++ E L+I D+ IDV H V R+G+ I+LTPLEFDLLVALARKP QVFTR+VLLE
Sbjct 122 RRSEEPAPEQLAIGDLVIDVAGHSVKRDGQSIALTPLEFDLLVALARKPWQVFTREVLLE 181
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRH ADTRLVNVHVQRLR+KVEKDPE P +V+TVRGVGYKAGP
Sbjct 182 QVWGYRHAADTRLVNVHVQRLRSKVEKDPEKPEIVVTVRGVGYKAGP 228
>gi|291445133|ref|ZP_06584523.1| two-component system response regulator [Streptomyces roseosporus
NRRL 15998]
gi|291348080|gb|EFE74984.1| two-component system response regulator [Streptomyces roseosporus
NRRL 15998]
Length=228
Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/227 (75%), Positives = 198/227 (88%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M M+ R+LVVDDD +LAEML IVLRGEGF+ + + DG +AL A RE +PDLVLLDLMLP
Sbjct 1 MSIMKGRVLVVDDDTALAEMLGIVLRGEGFEPSFVADGDKALAAFREAKPDLVLLDLMLP 60
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G +GI+VCR++RA+SGVPIVMLTAK+DTVDVV+GLESGADDYI+KPFKPKELVAR+RARL
Sbjct 61 GRDGIEVCRLIRAESGVPIVMLTAKSDTVDVVVGLESGADDYIVKPFKPKELVARIRARL 120
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR+++ E L+I D+ IDV H V R G+ I+LTPLEFDLLVALARKP QVFTR+VLLE
Sbjct 121 RRSEEPAPEQLTIGDLVIDVAGHSVKREGQSIALTPLEFDLLVALARKPWQVFTREVLLE 180
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRH ADTRLVNVHVQRLR+KVEKDPE P +V+TVRGVGYKAGP
Sbjct 181 QVWGYRHAADTRLVNVHVQRLRSKVEKDPERPEIVVTVRGVGYKAGP 227
>gi|302534786|ref|ZP_07287128.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
sp. C]
gi|302443681|gb|EFL15497.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
sp. C]
Length=229
Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/227 (76%), Positives = 198/227 (88%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M TM+ R+LVVDDD +LAEML IVLRGEGF+ + + DG +AL A RE +PDLVLLDLMLP
Sbjct 2 MSTMKGRVLVVDDDTALAEMLGIVLRGEGFEPSFVADGDKALAAFREAKPDLVLLDLMLP 61
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G +GI+VCR++RA+SGVPIVMLTAK+DTVDVV+GLESGADDYI+KPFKPKELVAR+RARL
Sbjct 62 GRDGIEVCRLIRAESGVPIVMLTAKSDTVDVVVGLESGADDYIVKPFKPKELVARIRARL 121
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR+++ E L I D+ IDV H V R+G I+LTPLEFDLLVALARKP QVFTR+VLLE
Sbjct 122 RRSEEPAPEQLVIGDLVIDVAGHSVKRDGASIALTPLEFDLLVALARKPWQVFTREVLLE 181
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRH ADTRLVNVHVQRLR+KVEKDPE P +V+TVRGVGYKAGP
Sbjct 182 QVWGYRHAADTRLVNVHVQRLRSKVEKDPERPEIVVTVRGVGYKAGP 228
>gi|297194039|ref|ZP_06911437.1| two-component system response regulator [Streptomyces pristinaespiralis
ATCC 25486]
gi|297152078|gb|EFH31517.1| two-component system response regulator [Streptomyces pristinaespiralis
ATCC 25486]
Length=229
Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/227 (75%), Positives = 199/227 (88%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M M+ R+LVVDDD +LAEML IVLRGEGF+ + + DG +AL A RE +PDLVLLDLMLP
Sbjct 2 MSFMKGRVLVVDDDTALAEMLGIVLRGEGFEPSFVADGDKALAAFREAKPDLVLLDLMLP 61
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G +GI+VCR++RA+SGVPIVMLTAK+DTVDVV+GLESGADDYI+KPFKPKELVAR+RARL
Sbjct 62 GRDGIEVCRLIRAESGVPIVMLTAKSDTVDVVVGLESGADDYIVKPFKPKELVARIRARL 121
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR+++ E L+I D+ IDV H V R+G+ I+LTPLEFDLLVALARKP QVFTR+VLLE
Sbjct 122 RRSEEPAPEQLTIGDLVIDVAGHSVKRDGQSIALTPLEFDLLVALARKPWQVFTREVLLE 181
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRH ADTRLVNVHVQRLR+KVEKDPE P +V+TVRGVGYKAGP
Sbjct 182 QVWGYRHAADTRLVNVHVQRLRSKVEKDPERPEIVVTVRGVGYKAGP 228
>gi|182438316|ref|YP_001826035.1| putative two-component system response regulator [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178466832|dbj|BAG21352.1| putative two-component system response regulator [Streptomyces
griseus subsp. griseus NBRC 13350]
Length=229
Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/227 (75%), Positives = 198/227 (88%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M M+ R+LVVDDD +LAEML IVLRGEGF+ + + DG +AL A RE +PDLVLLDLMLP
Sbjct 2 MSIMKGRVLVVDDDTALAEMLGIVLRGEGFEPSFVADGDKALAAFREAKPDLVLLDLMLP 61
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G +GI+VCR++RA+SGVPIVMLTAK+DTVDVV+GLESGADDYI+KPFKPKELVAR+RARL
Sbjct 62 GRDGIEVCRLIRAESGVPIVMLTAKSDTVDVVVGLESGADDYIVKPFKPKELVARIRARL 121
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR+++ E L+I D+ IDV H V R G+ I+LTPLEFDLLVALARKP QVFTR+VLLE
Sbjct 122 RRSEEPAPEQLTIGDLVIDVAGHSVKREGQSIALTPLEFDLLVALARKPWQVFTREVLLE 181
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRH ADTRLVNVHVQRLR+KVEKDPE P +V+TVRGVGYKAGP
Sbjct 182 QVWGYRHAADTRLVNVHVQRLRSKVEKDPERPEIVVTVRGVGYKAGP 228
>gi|291009674|ref|ZP_06567647.1| two-component response regulator [Saccharopolyspora erythraea
NRRL 2338]
Length=223
Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/225 (81%), Positives = 207/225 (92%), Gaps = 2/225 (0%)
Query 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMN 63
M+ R+LVVDDD +LAEMLTIVLRGEGF+TAV+ DGT+A+ A+REL+PDLVLLDLMLPGMN
Sbjct 1 MKARVLVVDDDPALAEMLTIVLRGEGFETAVVSDGTKAMPALRELKPDLVLLDLMLPGMN 60
Query 64 GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 123
GIDVC+ +R +S VPIVMLTAK+DTVDVVLGLESGADDY++KPFKPKELVAR+RARLRR
Sbjct 61 GIDVCKAIRTESVVPIVMLTAKSDTVDVVLGLESGADDYVVKPFKPKELVARLRARLRRT 120
Query 124 DDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVW 183
D EPAE+LSI D+ IDVP H+VTR+G+ I+LTPLEFDLLVALARKPRQVFTR+VLLEQVW
Sbjct 121 DAEPAEVLSIGDLTIDVPGHEVTRDGQPIALTPLEFDLLVALARKPRQVFTREVLLEQVW 180
Query 184 GYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP 228
GYRH ADTRLVN VQRLR+KVE+DPE P VVLTVRGVGYKAGPP
Sbjct 181 GYRHAADTRLVN--VQRLRSKVERDPERPEVVLTVRGVGYKAGPP 223
>gi|294812933|ref|ZP_06771576.1| Two-component system response regulator [Streptomyces clavuligerus
ATCC 27064]
gi|294325532|gb|EFG07175.1| Two-component system response regulator [Streptomyces clavuligerus
ATCC 27064]
Length=260
Score = 348 bits (894), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 170/227 (75%), Positives = 199/227 (88%), Gaps = 0/227 (0%)
Query 1 MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP 60
M M+ R+LVVDDD +LAEML IVLRGEGF+ + + DG +AL A RE +PDLVLLDLMLP
Sbjct 33 MSIMKGRVLVVDDDTALAEMLGIVLRGEGFEPSFVADGDKALAAFREAKPDLVLLDLMLP 92
Query 61 GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL 120
G +GI+VCR++RA+SGVPIVMLTAK+DTVDVV+GLESGADDYI+KPFKPKELVAR+RARL
Sbjct 93 GRDGIEVCRLIRAESGVPIVMLTAKSDTVDVVVGLESGADDYIIKPFKPKELVARIRARL 152
Query 121 RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE 180
RR+++ E L+I D+ IDV H V R+G+ I+LTPLEFDLLVALARKP QVFTR+VLLE
Sbjct 153 RRSEEPAPEQLTIGDLVIDVAGHSVKRDGQSIALTPLEFDLLVALARKPWQVFTREVLLE 212
Query 181 QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP 227
QVWGYRH ADTRLVNVHVQRLR+KVEKDPE P +V+TVRGVGYKAGP
Sbjct 213 QVWGYRHAADTRLVNVHVQRLRSKVEKDPERPEIVVTVRGVGYKAGP 259
Lambda K H
0.321 0.139 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 294240045594
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40