BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3247c Length=214 Score E Sequences producing significant alignments: (Bits) Value gi|15610383|ref|NP_217764.1| thymidylate kinase [Mycobacterium t... 420 6e-116 gi|289751941|ref|ZP_06511319.1| thymidylate kinase tmk [Mycobact... 419 1e-115 gi|340628225|ref|YP_004746677.1| putative thymidylate kinase TMK... 415 2e-114 gi|183981320|ref|YP_001849611.1| thymidylate kinase Tmk [Mycobac... 331 3e-89 gi|118618060|ref|YP_906392.1| thymidylate kinase [Mycobacterium ... 331 5e-89 gi|15827333|ref|NP_301596.1| thymidylate kinase [Mycobacterium l... 309 1e-82 gi|240172610|ref|ZP_04751269.1| thymidylate kinase [Mycobacteriu... 307 6e-82 gi|118463240|ref|YP_883352.1| thymidylate kinase [Mycobacterium ... 305 2e-81 gi|41409459|ref|NP_962295.1| thymidylate kinase [Mycobacterium a... 305 3e-81 gi|296168958|ref|ZP_06850627.1| thymidylate kinase [Mycobacteriu... 299 2e-79 gi|254822994|ref|ZP_05227995.1| thymidylate kinase [Mycobacteriu... 295 4e-78 gi|342861450|ref|ZP_08718097.1| thymidylate kinase [Mycobacteriu... 286 1e-75 gi|118468484|ref|YP_886239.1| thymidylate kinase [Mycobacterium ... 256 1e-66 gi|120402750|ref|YP_952579.1| thymidylate kinase [Mycobacterium ... 246 2e-63 gi|333991627|ref|YP_004524241.1| thymidylate kinase Tmk [Mycobac... 245 3e-63 gi|145225292|ref|YP_001135970.1| thymidylate kinase [Mycobacteri... 245 4e-63 gi|126433982|ref|YP_001069673.1| thymidylate kinase [Mycobacteri... 241 4e-62 gi|119867414|ref|YP_937366.1| thymidylate kinase [Mycobacterium ... 239 3e-61 gi|161407223|ref|YP_638514.2| thymidylate kinase [Mycobacterium ... 238 4e-61 gi|111023286|ref|YP_706258.1| thymidylate kinase [Rhodococcus jo... 229 2e-58 gi|226365793|ref|YP_002783576.1| thymidylate kinase [Rhodococcus... 228 5e-58 gi|312140676|ref|YP_004008012.1| dtmp kinase [Rhodococcus equi 1... 227 1e-57 gi|325675694|ref|ZP_08155378.1| thymidylate kinase [Rhodococcus ... 227 1e-57 gi|169630674|ref|YP_001704323.1| thymidylate kinase [Mycobacteri... 226 2e-57 gi|226305654|ref|YP_002765614.1| thymidylate kinase [Rhodococcus... 224 7e-57 gi|229489508|ref|ZP_04383371.1| thymidylate kinase [Rhodococcus ... 223 1e-56 gi|333921450|ref|YP_004495031.1| Thymidylate kinase [Amycolicico... 220 9e-56 gi|54026585|ref|YP_120827.1| thymidylate kinase [Nocardia farcin... 218 6e-55 gi|15866136|gb|AAL10206.1|AF410884_2 thimidylate kinase [Mycobac... 214 6e-54 gi|317508027|ref|ZP_07965717.1| thymidylate kinase [Segniliparus... 206 2e-51 gi|257057066|ref|YP_003134898.1| thymidylate kinase [Saccharomon... 202 4e-50 gi|262203512|ref|YP_003274720.1| thymidylate kinase [Gordonia br... 200 1e-49 gi|296394614|ref|YP_003659498.1| thymidylate kinase [Segniliparu... 199 3e-49 gi|291009673|ref|ZP_06567646.1| thymidylate kinase [Saccharopoly... 197 1e-48 gi|326383262|ref|ZP_08204950.1| thymidylate kinase [Gordonia neo... 197 1e-48 gi|302530026|ref|ZP_07282368.1| thymidylate kinase [Streptomyces... 195 3e-48 gi|134102882|ref|YP_001108543.1| thymidylate kinase [Saccharopol... 194 1e-47 gi|296138803|ref|YP_003646046.1| thymidylate kinase [Tsukamurell... 192 3e-47 gi|19551980|ref|NP_599982.1| thymidylate kinase [Corynebacterium... 191 4e-47 gi|258654373|ref|YP_003203529.1| thymidylate kinase [Nakamurella... 190 9e-47 gi|227550018|ref|ZP_03980067.1| thymidylate kinase [Corynebacter... 188 6e-46 gi|343927672|ref|ZP_08767140.1| thymidylate kinase [Gordonia alk... 187 6e-46 gi|227505511|ref|ZP_03935560.1| thymidylate kinase [Corynebacter... 185 5e-45 gi|319949855|ref|ZP_08023867.1| thymidylate kinase [Dietzia cinn... 182 3e-44 gi|300789814|ref|YP_003770105.1| dTMP kinase [Amycolatopsis medi... 181 9e-44 gi|255323824|ref|ZP_05364950.1| dTMP kinase [Corynebacterium tub... 180 1e-43 gi|311739824|ref|ZP_07713658.1| thymidylate kinase [Corynebacter... 179 2e-43 gi|331698936|ref|YP_004335175.1| Thymidylate kinase [Pseudonocar... 179 3e-43 gi|25027324|ref|NP_737378.1| thymidylate kinase [Corynebacterium... 177 1e-42 gi|227832501|ref|YP_002834208.1| Thymidylate kinase [Corynebacte... 176 1e-42 >gi|15610383|ref|NP_217764.1| thymidylate kinase [Mycobacterium tuberculosis H37Rv] gi|15842836|ref|NP_337873.1| thymidylate kinase [Mycobacterium tuberculosis CDC1551] gi|31794427|ref|NP_856920.1| thymidylate kinase [Mycobacterium bovis AF2122/97] 91 more sequence titles Length=214 Score = 420 bits (1080), Expect = 6e-116, Method: Compositional matrix adjust. Identities = 213/214 (99%), Positives = 214/214 (100%), Gaps = 0/214 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA Sbjct 1 MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV Sbjct 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA Sbjct 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS 214 ELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS Sbjct 181 ELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS 214 >gi|289751941|ref|ZP_06511319.1| thymidylate kinase tmk [Mycobacterium tuberculosis T92] gi|289692528|gb|EFD59957.1| thymidylate kinase tmk [Mycobacterium tuberculosis T92] Length=214 Score = 419 bits (1078), Expect = 1e-115, Method: Compositional matrix adjust. Identities = 212/214 (99%), Positives = 214/214 (100%), Gaps = 0/214 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA Sbjct 1 MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV Sbjct 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA Sbjct 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS 214 ELAAQGWGGRWLVVG+DVDPGRLAATLAPPDVPS Sbjct 181 ELAAQGWGGRWLVVGSDVDPGRLAATLAPPDVPS 214 >gi|340628225|ref|YP_004746677.1| putative thymidylate kinase TMK [Mycobacterium canettii CIPT 140010059] gi|340006415|emb|CCC45597.1| putative thymidylate kinase TMK (dTMP kinase) (thymidylic acid kinase) (TMPK) [Mycobacterium canettii CIPT 140010059] Length=214 Score = 415 bits (1067), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 210/214 (99%), Positives = 212/214 (99%), Gaps = 0/214 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA Sbjct 1 MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SSVYAMATLFALDRAGA HTIQGLCRG+DVVILDRYVASNAAYSAARLHENAAGKA AWV Sbjct 61 SSVYAMATLFALDRAGAAHTIQGLCRGHDVVILDRYVASNAAYSAARLHENAAGKATAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA Sbjct 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS 214 ELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS Sbjct 181 ELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS 214 >gi|183981320|ref|YP_001849611.1| thymidylate kinase Tmk [Mycobacterium marinum M] gi|183174646|gb|ACC39756.1| thymidylate kinase Tmk [Mycobacterium marinum M] Length=217 Score = 331 bits (849), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 169/213 (80%), Positives = 182/213 (86%), Gaps = 0/213 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTL E L F AAGRSVATLAFPRYG SV ADIAAEALHGEHGDLA Sbjct 1 MLIAIEGVDGAGKRTLSEGLRKEFEAAGRSVATLAFPRYGNSVTADIAAEALHGEHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SSV+AMATLFALDRA AV I GLC Y+VVILDRYVASNAAYSAARLH+++AG+A AWV Sbjct 61 SSVFAMATLFALDRAAAVDEIHGLCLAYEVVILDRYVASNAAYSAARLHQDSAGEAVAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 R+E+ R GLP+PDWQVLLAV ELAGERSRGRA+ DPGR RD+YERD LQQRTG+VYA Sbjct 121 GRMEYERFGLPEPDWQVLLAVPVELAGERSRGRARSDPGRPRDSYERDDGLQQRTGSVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLAPPDVP 213 ELAA GWGGRWLVV ADVDPG LAATL P P Sbjct 181 ELAAAGWGGRWLVVDADVDPGALAATLMSPTAP 213 >gi|118618060|ref|YP_906392.1| thymidylate kinase [Mycobacterium ulcerans Agy99] gi|118570170|gb|ABL04921.1| thymidylate kinase Tmk [Mycobacterium ulcerans Agy99] Length=222 Score = 331 bits (848), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 169/213 (80%), Positives = 182/213 (86%), Gaps = 0/213 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTL E L F AAGRSVATLAFPRYG SV ADIAAEALHGEHGDLA Sbjct 1 MLIAIEGVDGAGKRTLSEGLRKEFEAAGRSVATLAFPRYGNSVTADIAAEALHGEHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SSV+AMATLFALDRA AV I GLC Y+VVILDRYVASNAAYSAARLH+++AG+A AWV Sbjct 61 SSVFAMATLFALDRAAAVDEIHGLCLAYEVVILDRYVASNAAYSAARLHQDSAGEAVAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 R+E+ R GLP+PDWQVLLAV ELAGERSRGRA+ DPGR RD+YERD LQQRTG+VYA Sbjct 121 GRMEYERFGLPEPDWQVLLAVPVELAGERSRGRARSDPGRPRDSYERDDGLQQRTGSVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLAPPDVP 213 ELAA GWGGRWLVV ADVDPG LAATL P P Sbjct 181 ELAAAGWGGRWLVVDADVDPGALAATLMSPTAP 213 >gi|15827333|ref|NP_301596.1| thymidylate kinase [Mycobacterium leprae TN] gi|221229811|ref|YP_002503227.1| thymidylate kinase [Mycobacterium leprae Br4923] gi|13092882|emb|CAC30281.1| putative thymidylate kinase [Mycobacterium leprae] gi|219932918|emb|CAR70866.1| putative thymidylate kinase [Mycobacterium leprae Br4923] Length=210 Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 160/207 (78%), Positives = 175/207 (85%), Gaps = 0/207 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTL E+L AF A G+SVATLAFPRY QSVAADIAAEALHG+HGDLA Sbjct 1 MLIAIEGVDGAGKRTLSEELRQAFEATGKSVATLAFPRYRQSVAADIAAEALHGQHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SSVYAMA LFA DRAGAV I+ L R +D+VILDRYVASNAAYSAARLHE+ +G+A AWV Sbjct 61 SSVYAMALLFAFDRAGAVEDIEALDRNHDIVILDRYVASNAAYSAARLHEDCSGRAVAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 QRIE+ RL LP PDWQVLLAVS ELAG+RSR RA+ DP R RD+YERD LQQRTGAVYA Sbjct 121 QRIEYQRLRLPSPDWQVLLAVSVELAGKRSRYRARTDPDRLRDSYERDDGLQQRTGAVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATL 207 LAA WGGRWLVV AD+D G L ATL Sbjct 181 GLAAADWGGRWLVVDADIDSGWLVATL 207 >gi|240172610|ref|ZP_04751269.1| thymidylate kinase [Mycobacterium kansasii ATCC 12478] Length=214 Score = 307 bits (787), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 156/207 (76%), Positives = 175/207 (85%), Gaps = 0/207 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIA+EGVDGAGKRTL +L AF+A G+SV TLAFPRYG+SV ADIAAEALHG+HGDLA Sbjct 1 MLIAVEGVDGAGKRTLTVRLRAAFQAVGKSVVTLAFPRYGRSVTADIAAEALHGQHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SS YAMATLFALDRAGA I L R YDVVILDRYVASNAAYSAARL E+A G A AWV Sbjct 61 SSAYAMATLFALDRAGAAAEIAELRRNYDVVILDRYVASNAAYSAARLREDAGGPAVAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 Q+IE+ R+GLP PDWQVLLAV A+LA +R+R RA+ DPGRARD+YERD ELQ+RTG VYA Sbjct 121 QQIEYQRMGLPVPDWQVLLAVPADLAAQRARSRAEADPGRARDSYERDDELQRRTGVVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATL 207 +LAA W GRWLVV +DVDP RLAATL Sbjct 181 QLAAADWNGRWLVVDSDVDPDRLAATL 207 >gi|118463240|ref|YP_883352.1| thymidylate kinase [Mycobacterium avium 104] gi|254776646|ref|ZP_05218162.1| thymidylate kinase [Mycobacterium avium subsp. avium ATCC 25291] gi|118164527|gb|ABK65424.1| thymidylate kinase [Mycobacterium avium 104] Length=210 Score = 305 bits (782), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 161/208 (78%), Positives = 176/208 (85%), Gaps = 0/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTL E L AF AAG+SVATLAFPRYG+SV ADIAAEALHGEHGDLA Sbjct 1 MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFPRYGRSVTADIAAEALHGEHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SSVYAMA LFALDRA AV I+GL R +DVVI+DRYVASNAAY+AARLH++A G A AWV Sbjct 61 SSVYAMAMLFALDRAAAVGDIEGLRRDHDVVIMDRYVASNAAYTAARLHQDADGPAVAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +E+ RL LP PD QVLLAVSAELA ER+R RA+ DPGRARD+YERD LQQRTGAVYA Sbjct 121 HTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYERDDGLQQRTGAVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLA 208 +LAA GWGG W VV ADVDP RLAA LA Sbjct 181 QLAAAGWGGAWRVVDADVDPARLAADLA 208 >gi|41409459|ref|NP_962295.1| thymidylate kinase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398290|gb|AAS05911.1| Tmk [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459677|gb|EGO38612.1| thymidylate kinase [Mycobacterium avium subsp. paratuberculosis S397] Length=210 Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 161/208 (78%), Positives = 176/208 (85%), Gaps = 0/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTL E L AF AAG+SVATLAFPRYG+SV ADIAAEALHGEHGDLA Sbjct 1 MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFPRYGRSVTADIAAEALHGEHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SSVYAMA LFALDRA AV I+GL R +DVVI+DRYVASNAAY+AARLH++A G A AWV Sbjct 61 SSVYAMAMLFALDRAAAVGDIEGLRRDHDVVIMDRYVASNAAYTAARLHQDADGPAVAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +E+ RL LP PD QVLLAVSAELA ER+R RA+ DPGRARD+YERD LQQRTGAVYA Sbjct 121 HTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYERDDGLQQRTGAVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLA 208 +LAA GWGG W VV ADVDP RLAA LA Sbjct 181 QLAAAGWGGAWRVVDADVDPARLAADLA 208 >gi|296168958|ref|ZP_06850627.1| thymidylate kinase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896427|gb|EFG76080.1| thymidylate kinase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=229 Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 163/215 (76%), Positives = 178/215 (83%), Gaps = 1/215 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTL E L AF AAG+SVA + FPRYG+SV AD+AAEALHG HGDLA Sbjct 1 MLIAIEGVDGAGKRTLSEGLRKAFEAAGKSVAIVGFPRYGKSVTADVAAEALHGRHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 +SVYAMA LFALDRAGAV I+ L R +DVVILDRYVASNAAYSAARLHE A G AAAWV Sbjct 61 ASVYAMAMLFALDRAGAVEDIEALRRDHDVVILDRYVASNAAYSAARLHEGAGGAAAAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 E+ RL LP PDWQVLLAV A+LAG+R+R RA+ DPGRARD+YERD ELQ RTGAVYA Sbjct 121 LEFEYRRLRLPAPDWQVLLAVPADLAGQRARSRAESDPGRARDSYERDDELQLRTGAVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLA-PPDVPS 214 ELAA GWGG WLV ADVDPGRLAATL DVP+ Sbjct 181 ELAAAGWGGPWLVADADVDPGRLAATLVGAKDVPA 215 >gi|254822994|ref|ZP_05227995.1| thymidylate kinase [Mycobacterium intracellulare ATCC 13950] Length=210 Score = 295 bits (754), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 162/207 (79%), Positives = 176/207 (86%), Gaps = 0/207 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTL E L AF AAGRSVATLAFPRYGQSV ADIAAEALHGEHGDLA Sbjct 1 MLIAIEGVDGAGKRTLTEGLLSAFEAAGRSVATLAFPRYGQSVTADIAAEALHGEHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SSVYAMATLFALDRA AV ++GL R +DVVI+DRYVASNAAY+AARLH++A G A AWV Sbjct 61 SSVYAMATLFALDRAAAVEQLEGLRRDHDVVIMDRYVASNAAYTAARLHQDAGGPAVAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +E+ RLGLP PDWQVLLAV AELAG+R+R RA DPGRARD+YERD ELQQRTG VYA Sbjct 121 HGLEYQRLGLPAPDWQVLLAVPAELAGQRARSRAASDPGRARDSYERDDELQQRTGDVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATL 207 LAA GWGG W VV DVDPG LAA+L Sbjct 181 GLAAAGWGGPWRVVDKDVDPGGLAASL 207 >gi|342861450|ref|ZP_08718097.1| thymidylate kinase [Mycobacterium colombiense CECT 3035] gi|342130939|gb|EGT84228.1| thymidylate kinase [Mycobacterium colombiense CECT 3035] Length=218 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 154/202 (77%), Positives = 172/202 (86%), Gaps = 0/202 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEG+DGAGKRTL +KL F+A GRSVA LAFPRYG+SV ADIAAEALHGEHGDLA Sbjct 1 MLIAIEGIDGAGKRTLTDKLRNLFQADGRSVAMLAFPRYGRSVTADIAAEALHGEHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SSVYAMATLFALDRAGAV I+ L R +DVVI+DRYVASNAAY+AARLH++A+G A W+ Sbjct 61 SSVYAMATLFALDRAGAVGEIEALRREHDVVIMDRYVASNAAYTAARLHQDASGPAVEWI 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +E+ RLGLP PDWQVLLAV AELAG R+R RA+ DPGRARD+YERD LQQRT AVYA Sbjct 121 HALEYRRLGLPAPDWQVLLAVPAELAGRRARSRAEADPGRARDSYERDDGLQQRTAAVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGR 202 ELAA GWGG WL V ADVDPGR Sbjct 181 ELAAAGWGGPWLSVDADVDPGR 202 >gi|118468484|ref|YP_886239.1| thymidylate kinase [Mycobacterium smegmatis str. MC2 155] gi|118169771|gb|ABK70667.1| thymidylate kinase [Mycobacterium smegmatis str. MC2 155] Length=210 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 136/208 (66%), Positives = 151/208 (73%), Gaps = 0/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTL L AF +SVA+LAFPRY QSV AD+AAEAL G HGDLA Sbjct 1 MLIAIEGVDGAGKRTLTNGLRAAFETNHKSVASLAFPRYHQSVPADLAAEALRGSHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SVYAMATLFALDRAGA I+ L YDVVILDRYVASNAAYSAARLH+ G+ WV Sbjct 61 ESVYAMATLFALDRAGAREQIEHLQAAYDVVILDRYVASNAAYSAARLHQGVDGEVVTWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +EF RL LP PDWQVLL V ELA +R+ RA + RA+D YERD LQ+RTG VYA Sbjct 121 HELEFGRLHLPVPDWQVLLNVPTELAAQRAEHRANTEADRAKDAYERDDGLQRRTGEVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLA 208 LAA WGGRW + G DVD LA L+ Sbjct 181 ALAAADWGGRWAIAGPDVDATALADRLS 208 >gi|120402750|ref|YP_952579.1| thymidylate kinase [Mycobacterium vanbaalenii PYR-1] gi|119955568|gb|ABM12573.1| thymidylate kinase [Mycobacterium vanbaalenii PYR-1] Length=211 Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 141/207 (69%), Positives = 154/207 (75%), Gaps = 0/207 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LI IEGVDGAGKRTL L AF + GRSVATLAFPRYG SV AD+AAEALHG HGDLA Sbjct 1 MLIVIEGVDGAGKRTLTNGLRAAFESDGRSVATLAFPRYGVSVPADLAAEALHGAHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SVYAMA LFA+DRAGA I L YDVV+LDRYVASNAAYSAARLH+ G AAWV Sbjct 61 ESVYAMAVLFAMDRAGARDEIDHLKSAYDVVLLDRYVASNAAYSAARLHQGVDGDVAAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +E+ RL LPKPDWQVLL V ELA +R+ RA R+ RARD YERD LQ+RT AVYA Sbjct 121 GDLEYGRLRLPKPDWQVLLDVPTELAAQRAVSRAAREADRARDAYERDDGLQRRTSAVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATL 207 ELAA WGG W+VV DVD LA L Sbjct 181 ELAAANWGGPWVVVPPDVDAAALADRL 207 >gi|333991627|ref|YP_004524241.1| thymidylate kinase Tmk [Mycobacterium sp. JDM601] gi|333487595|gb|AEF36987.1| thymidylate kinase Tmk [Mycobacterium sp. JDM601] Length=209 Score = 245 bits (625), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 139/208 (67%), Positives = 156/208 (75%), Gaps = 0/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGK TL L AF AAG+SVA+LAFPRYG SV AD+AAEAL G HGDLA Sbjct 1 MLIAIEGVDGAGKNTLTNGLRAAFEAAGKSVASLAFPRYGVSVTADVAAEALRGRHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SVYAMA LFALDRAGA I LCR +DVVILDRYVAS+AAYSAARL ++A G+ AWV Sbjct 61 DSVYAMAMLFALDRAGAKDQIGELCREHDVVILDRYVASSAAYSAARLRQDADGEVVAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 + +EF RLGLP PDWQVLL V AELA +R+R R RD RARD+YERD LQ+RTG VY Sbjct 121 RELEFERLGLPAPDWQVLLDVPAELAAQRARDRETRDAARARDSYERDDGLQRRTGEVYR 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLA 208 LA G+GG W + G V P LA L Sbjct 181 GLARAGFGGPWQLAGPTVAPAELAGVLC 208 >gi|145225292|ref|YP_001135970.1| thymidylate kinase [Mycobacterium gilvum PYR-GCK] gi|315445589|ref|YP_004078468.1| thymidylate kinase [Mycobacterium sp. Spyr1] gi|145217778|gb|ABP47182.1| thymidylate kinase [Mycobacterium gilvum PYR-GCK] gi|315263892|gb|ADU00634.1| thymidylate kinase [Mycobacterium sp. Spyr1] Length=209 Score = 245 bits (625), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 140/207 (68%), Positives = 153/207 (74%), Gaps = 0/207 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LI IEGVDGAGKRTL L AF + GRSVATLAFPRYG SV AD+AAEALHG+HGDLA Sbjct 1 MLIVIEGVDGAGKRTLTNGLRAAFESGGRSVATLAFPRYGVSVPADVAAEALHGQHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SVYAMA LFA+DRAGA I L Y VVILDRYVASNAAYSAARLH+ A G AWV Sbjct 61 DSVYAMAMLFAMDRAGARDEIGHLTSAYSVVILDRYVASNAAYSAARLHQGADGDVVAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 + +E+ RL LP P WQVLL V ELA +R+ RA D RARD YERD LQ+RTGAVYA Sbjct 121 RDLEYGRLKLPVPTWQVLLDVPTELAAQRAVNRAAEDAARARDAYERDDGLQRRTGAVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATL 207 ELAA WGG W V+ DVD LAA L Sbjct 181 ELAAAQWGGPWAVIPPDVDAAELAARL 207 >gi|126433982|ref|YP_001069673.1| thymidylate kinase [Mycobacterium sp. JLS] gi|126233782|gb|ABN97182.1| thymidylate kinase [Mycobacterium sp. JLS] Length=229 Score = 241 bits (616), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 138/207 (67%), Positives = 154/207 (75%), Gaps = 0/207 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 VLIAIEGVDGAGKRTL + AF AGRSVATLAFPRY +SV AD+AAEALHG HGDLA Sbjct 20 VLIAIEGVDGAGKRTLTTGMRAAFEGAGRSVATLAFPRYHRSVTADLAAEALHGSHGDLA 79 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SVYAMA LFALDRA A I L YDVVILDRYVASNAAYSAARLH++A G+A WV Sbjct 80 ESVYAMAVLFALDRADARDEIAHLAAAYDVVILDRYVASNAAYSAARLHQSADGEAVEWV 139 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 + +E+ RLGLP DWQ+LL V LA ER+ RA+++ RARD YERD LQ+RTG VY Sbjct 140 RSLEYDRLGLPAADWQILLDVPTALAAERAERRAEQEADRARDAYERDDGLQRRTGEVYK 199 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATL 207 LAA W GRW+V G DVD LA L Sbjct 200 ALAATDWCGRWIVAGPDVDAAALADGL 226 >gi|119867414|ref|YP_937366.1| thymidylate kinase [Mycobacterium sp. KMS] gi|108768736|gb|ABG07458.1| thymidylate kinase [Mycobacterium sp. MCS] gi|119693503|gb|ABL90576.1| thymidylate kinase [Mycobacterium sp. KMS] Length=229 Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 137/207 (67%), Positives = 154/207 (75%), Gaps = 0/207 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 VLIAIEGVDGAGKRTL + AF AGRSVATLAFPRY +SV AD+AAEALHG HGDLA Sbjct 20 VLIAIEGVDGAGKRTLTTGMRAAFEGAGRSVATLAFPRYHRSVTADLAAEALHGRHGDLA 79 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SVYAMA LFALDRA A I L +DVVILDRYVASNAAYSAARLH++A G+A WV Sbjct 80 ESVYAMAVLFALDRADARDEIAHLAAAHDVVILDRYVASNAAYSAARLHQSADGEAVEWV 139 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 + +E+ RLGLP DWQ+LL V LA ER+ RA+++ RARD YERD LQ+RTG VY Sbjct 140 RSLEYDRLGLPAADWQILLDVPTALAAERAERRAEQEADRARDAYERDDGLQRRTGEVYQ 199 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATL 207 LAA W GRW+V G DVD LA L Sbjct 200 ALAATDWCGRWIVAGPDVDAAALADGL 226 >gi|161407223|ref|YP_638514.2| thymidylate kinase [Mycobacterium sp. MCS] Length=210 Score = 238 bits (607), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 135/204 (67%), Positives = 153/204 (75%), Gaps = 0/204 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTL + AF AGRSVATLAFPRY +SV AD+AAEALHG HGDLA Sbjct 1 MLIAIEGVDGAGKRTLTTGMRAAFEGAGRSVATLAFPRYHRSVTADLAAEALHGRHGDLA 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SVYAMA LFALDRA A I L +DVVILDRYVASNAAYSAARLH++A G+A WV Sbjct 61 ESVYAMAVLFALDRADARDEIAHLAAAHDVVILDRYVASNAAYSAARLHQSADGEAVEWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 + +E+ RLGLP DWQ+LL V LA ER+ RA+++ RARD YERD LQ+RTG VY Sbjct 121 RSLEYDRLGLPAADWQILLDVPTALAAERAERRAEQEADRARDAYERDDGLQRRTGEVYQ 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLA 204 LAA W GRW+V G DVD LA Sbjct 181 ALAATDWCGRWIVAGPDVDAAALA 204 >gi|111023286|ref|YP_706258.1| thymidylate kinase [Rhodococcus jostii RHA1] gi|110822816|gb|ABG98100.1| probable thymidylate kinase [Rhodococcus jostii RHA1] Length=227 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 121/207 (59%), Positives = 145/207 (71%), Gaps = 0/207 (0%) Query 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 LIA+EG+DGAGKRTLV + G G +V TL FPRYG+SV AD+A+EAL G HGDL+ Sbjct 4 LIALEGLDGAGKRTLVGAVVGRLTEQGLTVGTLDFPRYGRSVHADLASEALKGAHGDLSD 63 Query 62 SVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQ 121 SVYAMA +FALDR+GAV + L +D+VILDRYVASNAAY AARLH+ A G+ WVQ Sbjct 64 SVYAMAVMFALDRSGAVGELAELLAEHDLVILDRYVASNAAYGAARLHQGADGEFVGWVQ 123 Query 122 RIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAE 181 +EF RLGLP+PD Q+ L V LA +R+RGR D R+ D YERD LQ+RTG VY E Sbjct 124 NLEFERLGLPRPDLQLYLDVPVALAAQRARGRESADASRSLDAYERDRGLQERTGEVYRE 183 Query 182 LAAQGWGGRWLVVGADVDPGRLAATLA 208 LA + W W V+ D DP LA LA Sbjct 184 LAVKDWISPWWVLTPDTDPITLAENLA 210 >gi|226365793|ref|YP_002783576.1| thymidylate kinase [Rhodococcus opacus B4] gi|226244283|dbj|BAH54631.1| thymidylate kinase [Rhodococcus opacus B4] Length=227 Score = 228 bits (581), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 120/208 (58%), Positives = 145/208 (70%), Gaps = 0/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 LIA+EG+DGAGKRTLV + G +V TL FPRYG+SV AD+A+EAL G HGDLA Sbjct 3 TLIALEGLDGAGKRTLVGAVVDRLTERGLTVGTLDFPRYGRSVHADLASEALKGAHGDLA 62 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SV+AMA +FALDR+GAV + L G+D+VILDRYVASNAAY AARLH+ A G+ WV Sbjct 63 ESVHAMAVMFALDRSGAVGELSDLLAGHDLVILDRYVASNAAYGAARLHQAADGEFVGWV 122 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 + +EF RLGLP+PD Q+ L V LA +R+RGR D R+ D YERD LQ+RTG VY Sbjct 123 ENLEFERLGLPRPDLQLYLDVPVALAAQRARGRESADASRSLDAYERDRGLQERTGEVYR 182 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLA 208 ELA + W W V+ D DP LA LA Sbjct 183 ELAVKDWMSPWWVLTPDTDPVTLAENLA 210 >gi|312140676|ref|YP_004008012.1| dtmp kinase [Rhodococcus equi 103S] gi|311890015|emb|CBH49333.1| dTMP kinase [Rhodococcus equi 103S] Length=220 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 118/208 (57%), Positives = 144/208 (70%), Gaps = 0/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIA+EG+DGAGKRTLV K+ A G VATL FPRYG S+ AD+A+EAL G HGDL+ Sbjct 1 MLIALEGLDGAGKRTLVGKVVARLEADGLDVATLDFPRYGTSIHADLASEALKGAHGDLS 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 +SV+AMA +FALDRAGA ++ L +DVVILDRYVASNAAY AAR+HE G+ W+ Sbjct 61 ASVHAMAVMFALDRAGAADRLRDLVAAHDVVILDRYVASNAAYGAARMHEGGDGEFVGWI 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 + +EF RLGLP+PD Q+ L V LA +R+R R D R D YE+D+ LQ RTG VY Sbjct 121 ENLEFDRLGLPRPDLQLYLDVPVALAEQRARAREAEDVSRTLDAYEKDSGLQARTGEVYR 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLA 208 ELAA W W + D DPG LA LA Sbjct 181 ELAAADWNSPWWTLTPDTDPGILADKLA 208 >gi|325675694|ref|ZP_08155378.1| thymidylate kinase [Rhodococcus equi ATCC 33707] gi|325553665|gb|EGD23343.1| thymidylate kinase [Rhodococcus equi ATCC 33707] Length=222 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 118/208 (57%), Positives = 144/208 (70%), Gaps = 0/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIA+EG+DGAGKRTLV K+ A G VATL FPRYG S+ AD+A+EAL G HGDL+ Sbjct 3 MLIALEGLDGAGKRTLVGKVVARLEADGLDVATLDFPRYGTSIHADLASEALKGAHGDLS 62 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 +SV+AMA +FALDRAGA ++ L +DVVILDRYVASNAAY AAR+HE G+ W+ Sbjct 63 ASVHAMAVMFALDRAGAADRLRDLVAAHDVVILDRYVASNAAYGAARMHEGGDGEFVGWI 122 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 + +EF RLGLP+PD Q+ L V LA +R+R R D R D YE+D+ LQ RTG VY Sbjct 123 ENLEFDRLGLPRPDLQLYLDVPVALAEQRARAREAEDVSRTLDAYEKDSGLQARTGEVYR 182 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLA 208 ELAA W W + D DPG LA LA Sbjct 183 ELAAADWNSPWWTLTPDTDPGILADKLA 210 >gi|169630674|ref|YP_001704323.1| thymidylate kinase [Mycobacterium abscessus ATCC 19977] gi|169242641|emb|CAM63669.1| Probable thymidylate kinase Tmk [Mycobacterium abscessus] Length=212 Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 125/206 (61%), Positives = 150/206 (73%), Gaps = 1/206 (0%) Query 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 LIAIEGVDGAGKRTL EKL + G SVATL FPRYG+SV AD+AAE+L G HGD+ S Sbjct 4 LIAIEGVDGAGKRTLTEKLIARGNSQGLSVATLDFPRYGRSVHADLAAESLKGGHGDVVS 63 Query 62 SVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQ 121 S YAM LFALDR A + GL R +D+VILDR+VASNAAY AARLH++ G A WV Sbjct 64 SAYAMGLLFALDRRDARDELAGLTRSHDLVILDRWVASNAAYGAARLHQDGGGDMARWVH 123 Query 122 RIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAE 181 ++E+ R GLP PDWQV L VS ELA +R+R R Q++ RARD YERD++LQQR A YA+ Sbjct 124 QLEYERFGLPHPDWQVFLDVSPELAQQRARQREQQESDRARDTYERDSDLQQRVSAAYAD 183 Query 182 LAAQGWGGRWLVVGADVDPGRLAATL 207 LA + WGG W++ V+P LAA L Sbjct 184 LAQRDWGGPWMITDG-VEPEALAAQL 208 >gi|226305654|ref|YP_002765614.1| thymidylate kinase [Rhodococcus erythropolis PR4] gi|226184771|dbj|BAH32875.1| putative thymidylate kinase [Rhodococcus erythropolis PR4] Length=213 Score = 224 bits (571), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 115/208 (56%), Positives = 141/208 (68%), Gaps = 0/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 L+A+EG+DGAGKRTL+ K+ R G S+ATL FPRYG+S+ AD+AAEAL G HGDLA Sbjct 3 TLVALEGLDGAGKRTLIGKVETELRRGGTSIATLDFPRYGKSIHADLAAEALKGSHGDLA 62 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SV AMA LFALDRAGA I L D+V+LDRYVASNAAY+AAR+H+ G+ AW+ Sbjct 63 ESVNAMAVLFALDRAGAADRISELLSANDIVLLDRYVASNAAYNAARVHQGVDGEMVAWI 122 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 + +E RL LP PD Q+ L V LA +R+R R +D R D YERD LQ RTG +Y Sbjct 123 RELELGRLALPAPDLQLYLDVPVALAEQRARSREAQDASRQLDAYERDGGLQARTGELYK 182 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLA 208 +LAA W W +VG + DP LA LA Sbjct 183 QLAATNWASPWWIVGPETDPADLARRLA 210 >gi|229489508|ref|ZP_04383371.1| thymidylate kinase [Rhodococcus erythropolis SK121] gi|229323605|gb|EEN89363.1| thymidylate kinase [Rhodococcus erythropolis SK121] Length=213 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 116/208 (56%), Positives = 140/208 (68%), Gaps = 0/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 L+A+EG+DGAGKRTL+ K+ R G S+ATL FPRYG+S+ AD+AAEAL G HGDLA Sbjct 3 TLVALEGLDGAGKRTLIGKVESELRRGGTSIATLDFPRYGKSIHADLAAEALKGSHGDLA 62 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SV AMA LFALDRAGA I L D+V+LDRYVASNAAY+AAR+H+ G+ AWV Sbjct 63 ESVNAMAVLFALDRAGAADRISDLLSANDIVLLDRYVASNAAYNAARVHQGVDGEMVAWV 122 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 + +E RL LP PD Q+ L V LA +R+R R D R D YERD LQ RTG +Y Sbjct 123 RELELGRLALPAPDLQLYLDVPVALAEQRARSREAEDASRQLDAYERDGGLQARTGELYK 182 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLA 208 +LAA W W +VG + DP LA LA Sbjct 183 QLAATDWVSPWWIVGPETDPAELARRLA 210 >gi|333921450|ref|YP_004495031.1| Thymidylate kinase [Amycolicicoccus subflavus DQS3-9A1] gi|333483671|gb|AEF42231.1| Thymidylate kinase [Amycolicicoccus subflavus DQS3-9A1] Length=211 Score = 220 bits (561), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 119/200 (60%), Positives = 139/200 (70%), Gaps = 1/200 (0%) Query 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 LIA+EG+DGAGKRTL KL AAG VATLAFPRYG+S+ ADIAAEAL G+HGDLA+ Sbjct 4 LIALEGLDGAGKRTLTAKLVVELEAAGARVATLAFPRYGESIHADIAAEALRGQHGDLAA 63 Query 62 SVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQ 121 SV+ MA LFALDRA A + LC DVVILDRYVASNAAY AARL EN+ G W++ Sbjct 64 SVHGMAMLFALDRAAAKSHLSRLCSDNDVVILDRYVASNAAYGAARLRENSDGPFVQWIE 123 Query 122 RIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAE 181 +EF R LP P Q+ L V ELA R+ GR +PGR RD +ERD +LQ+RT VY+ Sbjct 124 NLEFGRFRLPLPARQMFLGVPVELAQRRAAGREGTEPGRERDIFERDGDLQRRTANVYSA 183 Query 182 LAAQGWGGRWLVVGADVDPG 201 LAA W W V+ A DPG Sbjct 184 LAAAAWVSPWRVLTA-TDPG 202 >gi|54026585|ref|YP_120827.1| thymidylate kinase [Nocardia farcinica IFM 10152] gi|54018093|dbj|BAD59463.1| putative thymidylate kinase [Nocardia farcinica IFM 10152] Length=215 Score = 218 bits (554), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 120/208 (58%), Positives = 143/208 (69%), Gaps = 0/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIA+EG+DGAGKRTL + + A A G ATL FPRYG+SV AD+AAEALHG HGDLA Sbjct 3 LLIALEGLDGAGKRTLTDAVVAALGARGVRAATLGFPRYGRSVHADLAAEALHGAHGDLA 62 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SSVYAMA LFALDRA A + D+VILDRYVASNAAY+AARLH++A G+ W Sbjct 63 SSVYAMALLFALDRAEARDELSKALADNDIVILDRYVASNAAYNAARLHQSATGEIVGWT 122 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +EF R GLP+PD Q+LL V E+A ER+R R + D R D YERD LQ+RT AVY Sbjct 123 ADLEFGRFGLPEPDVQLLLDVDTEVAAERARRRTELDADRPLDAYERDGGLQRRTLAVYR 182 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLA 208 ELA + W G W + +P LA LA Sbjct 183 ELAERNWHGPWWRYRSGDEPAALAGRLA 210 >gi|15866136|gb|AAL10206.1|AF410884_2 thimidylate kinase [Mycobacterium avium subsp. paratuberculosis] Length=210 Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 124/208 (60%), Positives = 139/208 (67%), Gaps = 0/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LIAIEGVDGAGKRTL E L AF AAG+SVATLAF G V Sbjct 1 MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFRVTGAPVPPTSRPRRCTASTATWR 60 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 GA T + L R + VVI+DR+VASNAAY+AARLH++A G A AWV Sbjct 61 CRCTRWRCSSRWTGPGAWGTFKALRRDHHVVIMDRFVASNAAYTAARLHQDADGPAVAWV 120 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +E+ RL LP PD QVLLAVSAELA ER+R RA+ DPGRARD+YERD LQQRTGAVYA Sbjct 121 HTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYERDDGLQQRTGAVYA 180 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLA 208 +LAA GWGG W VV ADVDP RLAA LA Sbjct 181 QLAAAGWGGAWRVVDADVDPARLAADLA 208 >gi|317508027|ref|ZP_07965717.1| thymidylate kinase [Segniliparus rugosus ATCC BAA-974] gi|316253689|gb|EFV13069.1| thymidylate kinase [Segniliparus rugosus ATCC BAA-974] Length=209 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 121/208 (59%), Positives = 142/208 (69%), Gaps = 1/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEH-GDL 59 +LI +EG+DGAGK TL LS +R G VA +AFPRYGQSV AD+AAE+L G+ G + Sbjct 1 MLITVEGLDGAGKNTLTSALSETWRGRGLRVAKMAFPRYGQSVHADVAAESLRGDFDGRI 60 Query 60 ASSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAW 119 A+ MA LFALDR A ++ L +DVV+ DRYVASNAAY AARL E+A G AAW Sbjct 61 AADPLGMALLFALDRYEAKGELEALLGAHDVVLCDRYVASNAAYGAARLGEDATGPFAAW 120 Query 120 VQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVY 179 V EF RLGLPKPD Q+LLA LA ER+R RA DPGR RD YERDA LQ+R GAVY Sbjct 121 VLAFEFGRLGLPKPDHQLLLATPPGLAAERARWRAASDPGRERDAYERDAPLQERVGAVY 180 Query 180 AELAAQGWGGRWLVVGADVDPGRLAATL 207 A LA GW G W ++ + DP LAA L Sbjct 181 AGLAETGWAGPWRLIAPEADPAGLAAEL 208 >gi|257057066|ref|YP_003134898.1| thymidylate kinase [Saccharomonospora viridis DSM 43017] gi|256586938|gb|ACU98071.1| thymidylate kinase [Saccharomonospora viridis DSM 43017] Length=220 Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 104/193 (54%), Positives = 126/193 (66%), Gaps = 0/193 (0%) Query 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 L+ +EG+DGAGKRTL E L+ A R G +V T+ FPRYG+ V AD+ EALHG HGDLA Sbjct 4 LVVVEGLDGAGKRTLTESLTAALREHGATVTTMTFPRYGRDVHADLVREALHGAHGDLAE 63 Query 62 SVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQ 121 SVY MA L+ALDR GA I+ +DVV+LDRYVASNAAY AARL + G WV+ Sbjct 64 SVYGMAVLYALDRRGARDDIRRALDEHDVVLLDRYVASNAAYQAARLRQGVDGPVVRWVR 123 Query 122 RIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAE 181 +E R GLP PD Q+LL V E+A ER+ R ++D R RD +E D LQ R VY E Sbjct 124 ELEIDRFGLPVPDTQLLLRVPVEVAAERAVARERQDTSRTRDAFESDDALQARCARVYDE 183 Query 182 LAAQGWGGRWLVV 194 LAA W W V+ Sbjct 184 LAASHWLSEWRVL 196 >gi|262203512|ref|YP_003274720.1| thymidylate kinase [Gordonia bronchialis DSM 43247] gi|262086859|gb|ACY22827.1| thymidylate kinase [Gordonia bronchialis DSM 43247] Length=211 Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 118/198 (60%), Positives = 135/198 (69%), Gaps = 1/198 (0%) Query 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 LIA+EG+DGAGK TLV L + G VAT FPRYG+S+ ADIA+EALHG HGDL Sbjct 4 LIAVEGLDGAGKNTLVTGLVDEWTRRGARVATFTFPRYGRSLTADIASEALHGNHGDLRE 63 Query 62 SVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQ 121 SVYAMA LFALDR+ AV I DVVILDRYVASNAAYSAARLH++A G+ WV Sbjct 64 SVYAMALLFALDRSAAVAEIAAAAEAADVVILDRYVASNAAYSAARLHQDADGEVVRWVA 123 Query 122 RIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAE 181 +EF RLGLP PD Q+LL V AE A R+ RA D RARD+YERD++LQ R AVY Sbjct 124 DLEFGRLGLPAPDRQILLGVPAETAMARAESRASADASRARDHYERDSDLQHRVDAVYRR 183 Query 182 LAAQGWGGRWLVV-GADV 198 LA W W GAD+ Sbjct 184 LADASWQSAWHEFDGADI 201 >gi|296394614|ref|YP_003659498.1| thymidylate kinase [Segniliparus rotundus DSM 44985] gi|296181761|gb|ADG98667.1| thymidylate kinase [Segniliparus rotundus DSM 44985] Length=209 Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 124/208 (60%), Positives = 146/208 (71%), Gaps = 1/208 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGD-L 59 +LI +EG+DGAGKRT+ + LS +RA GRSVA +AFPRYGQS AD+AAE+L G G + Sbjct 1 MLITVEGLDGAGKRTITDALSAVWRAQGRSVAQMAFPRYGQSAHADLAAESLRGAFGGRI 60 Query 60 ASSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAW 119 A+ AM LFALDR A + L +D+V+ DRY ASNAAY AARL E+AAG A+W Sbjct 61 AADPLAMGLLFALDRHEAKGELAALLGSHDIVLCDRYAASNAAYGAARLGEDAAGPFASW 120 Query 120 VQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVY 179 V EF RLGLP+PD Q+LLA A LA ER+R RA DPGRARD YERD ELQ+R GAVY Sbjct 121 VFEFEFGRLGLPEPDCQLLLATPAGLAAERARSRAAADPGRARDAYERDGELQERVGAVY 180 Query 180 AELAAQGWGGRWLVVGADVDPGRLAATL 207 LAA GW G W VV + DP LAA L Sbjct 181 GGLAATGWAGPWRVVAPEADPAALAAEL 208 >gi|291009673|ref|ZP_06567646.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338] Length=214 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 103/193 (54%), Positives = 129/193 (67%), Gaps = 0/193 (0%) Query 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 LI IEG+DGAGKRTL + L+ GRSVA +AFPRY V A++ AEAL G HGDL Sbjct 4 LIVIEGLDGAGKRTLADGLTAELSRRGRSVARVAFPRYDADVHAELVAEALRGGHGDLGD 63 Query 62 SVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQ 121 SV+ MA L+ALDR GA ++ +DVV+LDRYVASNAAY AARLH++A G AW + Sbjct 64 SVHGMAVLYALDRRGAADALRVDLETHDVVLLDRYVASNAAYGAARLHQDAQGDFVAWTE 123 Query 122 RIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAE 181 +E R LP+PD Q+LL V E+A R+ R + + R RDN+E DA LQ+R G VYA+ Sbjct 124 ELEIKRFALPRPDLQLLLQVPTEVAAGRAAHRERTEAERQRDNFESDASLQERCGEVYAQ 183 Query 182 LAAQGWGGRWLVV 194 LA + W W VV Sbjct 184 LAERNWWSPWRVV 196 >gi|326383262|ref|ZP_08204950.1| thymidylate kinase [Gordonia neofelifaecis NRRL B-59395] gi|326198012|gb|EGD55198.1| thymidylate kinase [Gordonia neofelifaecis NRRL B-59395] Length=209 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 103/191 (54%), Positives = 127/191 (67%), Gaps = 0/191 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +L+A+EG+DGAGKRT+V ++ A G SV+TLAFPRYG+S+ AD+A+EALHG HGDL Sbjct 3 ILVAVEGLDGAGKRTIVGRIEAAATDRGASVSTLAFPRYGESITADLASEALHGRHGDLR 62 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 SVYAMA LFALDRA A ++ +D+VI DRY ASNAAYSAARL A + WV Sbjct 63 ESVYAMALLFALDRAAARRQLREALTAHDLVICDRYCASNAAYSAARLGGGADSEVVEWV 122 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +EF R LP PD Q+LL V ++A R+ GRA+ D R D+YERDAELQ VY Sbjct 123 ADLEFGRFQLPVPDHQLLLGVPPDVAMSRANGRAETDADRPVDSYERDAELQHAVYRVYG 182 Query 181 ELAAQGWGGRW 191 E W W Sbjct 183 EFVESHWMSSW 193 >gi|302530026|ref|ZP_07282368.1| thymidylate kinase [Streptomyces sp. AA4] gi|302438921|gb|EFL10737.1| thymidylate kinase [Streptomyces sp. AA4] Length=210 Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 118/208 (57%), Positives = 140/208 (68%), Gaps = 2/208 (0%) Query 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 ++ IEG+DGAGKRTL E L+ A AG SV +LAFPRYG+SV AD+ EALH HGDLA Sbjct 1 MVVIEGLDGAGKRTLSEGLTAALEDAGASVGSLAFPRYGRSVHADLVREALHRGHGDLAD 60 Query 62 SVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQ 121 SVY MA L+ALDR+GA I+ L DVV+LDRYVASNAAY+AARL E+A G WV Sbjct 61 SVYGMAMLYALDRSGAADEIRALLAANDVVLLDRYVASNAAYAAARLREHADGAVVQWVW 120 Query 122 RIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAE 181 +E R GLP+PD +LL VS E+A ER+ RA+ D R RD +E D LQQR AVY E Sbjct 121 DLEVTRFGLPRPDAHLLLRVSPEVAAERAVRRAESDAARTRDAFESDDSLQQRCAAVYDE 180 Query 182 LAAQGWGGRWLVVG--ADVDPGRLAATL 207 LAA W W V+ A VD LA +L Sbjct 181 LAAASWLAPWHVLDGVAGVDLPTLAKSL 208 >gi|134102882|ref|YP_001108543.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338] gi|133915505|emb|CAM05618.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338] Length=209 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 101/190 (54%), Positives = 127/190 (67%), Gaps = 0/190 (0%) Query 5 IEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVY 64 IEG+DGAGKRTL + L+ GRSVA +AFPRY V A++ AEAL G HGDL SV+ Sbjct 2 IEGLDGAGKRTLADGLTAELSRRGRSVARVAFPRYDADVHAELVAEALRGGHGDLGDSVH 61 Query 65 AMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIE 124 MA L+ALDR GA ++ +DVV+LDRYVASNAAY AARLH++A G AW + +E Sbjct 62 GMAVLYALDRRGAADALRVDLETHDVVLLDRYVASNAAYGAARLHQDAQGDFVAWTEELE 121 Query 125 FARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAELAA 184 R LP+PD Q+LL V E+A R+ R + + R RDN+E DA LQ+R G VYA+LA Sbjct 122 IKRFALPRPDLQLLLQVPTEVAAGRAAHRERTEAERQRDNFESDASLQERCGEVYAQLAE 181 Query 185 QGWGGRWLVV 194 + W W VV Sbjct 182 RNWWSPWRVV 191 >gi|296138803|ref|YP_003646046.1| thymidylate kinase [Tsukamurella paurometabola DSM 20162] gi|296026937|gb|ADG77707.1| thymidylate kinase [Tsukamurella paurometabola DSM 20162] Length=213 Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 119/210 (57%), Positives = 142/210 (68%), Gaps = 0/210 (0%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 L+A+EG+DGAGK TL ++ G +VA LAFPRYG+S+ AD+AAEALHG HGD Sbjct 3 TLVAVEGLDGAGKNTLTRAVTQRLTDRGLTVAALAFPRYGRSIHADLAAEALHGGHGDAT 62 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 +SVY M LFALDR GA I+GL G+DVV+LDRY AS+AAYSAARL E+A G A WV Sbjct 63 ASVYGMGLLFALDRRGAADEIRGLLAGHDVVLLDRYAASSAAYSAARLGEDAHGAVATWV 122 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 + +EF R G+P PD QV L V +A R++GR D RARD YE+DA LQ RTGAVYA Sbjct 123 RELEFERFGVPVPDLQVYLDVPVAVAAARAKGREAHDATRARDVYEKDAGLQARTGAVYA 182 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATLAPP 210 LAA W W V G D P LA +A P Sbjct 183 GLAAAQWVSPWRVHGVDDAPELLADAIANP 212 >gi|19551980|ref|NP_599982.1| thymidylate kinase [Corynebacterium glutamicum ATCC 13032] gi|62389641|ref|YP_225043.1| thymidylate kinase [Corynebacterium glutamicum ATCC 13032] gi|145294916|ref|YP_001137737.1| thymidylate kinase [Corynebacterium glutamicum R] gi|21323519|dbj|BAB98146.1| Thymidylate kinase [Corynebacterium glutamicum ATCC 13032] gi|41324976|emb|CAF19457.1| THYMIDYLATE KINASE, PUTATIVE [Corynebacterium glutamicum ATCC 13032] gi|140844836|dbj|BAF53835.1| hypothetical protein [Corynebacterium glutamicum R] gi|344043747|gb|EGV39435.1| thymidylate kinase [Corynebacterium glutamicum S9114] Length=203 Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 108/204 (53%), Positives = 131/204 (65%), Gaps = 12/204 (5%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 ++++IEG+DGAGK TLV L+ A LAFPRY S+ A +AAEALHG GDL Sbjct 1 MIVSIEGIDGAGKNTLVSALTQVIDAK-----VLAFPRYETSIHAQLAAEALHGRMGDLT 55 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 S YAMATLFALDR A+ + VV+LDRYVASNAAY+AARL ++ A + WV Sbjct 56 DSAYAMATLFALDRHFAIDDLNAPG----VVLLDRYVASNAAYTAARLLDDDAPR---WV 108 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +EF RLGLP+P QVLL AE+A +R+R R D RARD YE D+ LQQRT Y Sbjct 109 ADLEFGRLGLPRPTLQVLLDTPAEVAQDRARRREALDSARARDRYESDSALQQRTAEHYR 168 Query 181 ELAAQGWGGRWLVVGADVDPGRLA 204 LAA W W+VV D DPG +A Sbjct 169 RLAADNWESPWIVVAPDEDPGHVA 192 >gi|258654373|ref|YP_003203529.1| thymidylate kinase [Nakamurella multipartita DSM 44233] gi|258557598|gb|ACV80540.1| thymidylate kinase [Nakamurella multipartita DSM 44233] Length=213 Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 103/199 (52%), Positives = 134/199 (68%), Gaps = 1/199 (0%) Query 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 LI IEG+DG+GKRTL + L+ ++A GR+VATLAFPRYG V AD+ +AL+G GDL+ Sbjct 4 LIVIEGLDGSGKRTLTQALAARWQADGRTVATLAFPRYGLDVHADLVQDALYGRLGDLSD 63 Query 62 SVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARL-HENAAGKAAAWV 120 S+Y A LFALDR A I+ L + +DV++LDRYV SNAAY +ARL + AWV Sbjct 64 SIYGPAVLFALDRRAAAGQIRDLRQAHDVLLLDRYVTSNAAYGSARLGGPDRPTDFPAWV 123 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 + +E R G+P PD Q+LLA S ELAG+R+R RA +D RA D +E D LQ+RT A+Y Sbjct 124 RALEIDRFGVPAPDHQILLATSVELAGQRARNRADQDQDRALDRFEADDGLQRRTAAMYR 183 Query 181 ELAAQGWGGRWLVVGADVD 199 LA Q + W V+ D D Sbjct 184 RLAEQDYLSPWTVLTPDSD 202 >gi|227550018|ref|ZP_03980067.1| thymidylate kinase [Corynebacterium lipophiloflavum DSM 44291] gi|227077927|gb|EEI15890.1| thymidylate kinase [Corynebacterium lipophiloflavum DSM 44291] Length=201 Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 103/195 (53%), Positives = 126/195 (65%), Gaps = 9/195 (4%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 ++IA+EG+DGAGK TLV + G A T+AFPRY S+ A +A EALHG GDL Sbjct 1 MIIAVEGIDGAGKNTLVNAIKGELGAE-----TVAFPRYADSIYAQLAREALHGRMGDLV 55 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYD-VVILDRYVASNAAYSAARLHENAAGKAAAW 119 S + MATLFALDRAGA + D ++ILDRYVASNAAY+AAR ++AA + W Sbjct 56 DSAHGMATLFALDRAGAKPLLDTFATAPDKIIILDRYVASNAAYTAARTGDDAAAR---W 112 Query 120 VQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVY 179 V +EF RLGLP+PD QVL+ AG+R+R R + D R RD YE DA LQQ T A Y Sbjct 113 VFELEFVRLGLPRPDLQVLVDTDPAEAGQRARRREEGDAERVRDRYESDASLQQDTFAAY 172 Query 180 AELAAQGWGGRWLVV 194 LA GW GRW+V Sbjct 173 VRLAETGWAGRWVVT 187 >gi|343927672|ref|ZP_08767140.1| thymidylate kinase [Gordonia alkanivorans NBRC 16433] gi|343762313|dbj|GAA14066.1| thymidylate kinase [Gordonia alkanivorans NBRC 16433] Length=204 Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 107/187 (58%), Positives = 127/187 (68%), Gaps = 0/187 (0%) Query 5 IEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVY 64 +EG+DGAGK TLV L + A+G VAT FPRYGQS ADIA+EALHG HGDL SVY Sbjct 1 MEGLDGAGKNTLVAGLVERWTASGLRVATFTFPRYGQSATADIASEALHGSHGDLRDSVY 60 Query 65 AMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIE 124 AMA LFALDRA A I D+VILDRYVASNAAY+A RL ++A G+ WV +E Sbjct 61 AMALLFALDRADAAADITAATGSNDIVILDRYVASNAAYNAGRLEQDADGEVVRWVADLE 120 Query 125 FARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAELAA 184 + R G+P PD VLL V AE+A +R+ RA D RARD YERD++LQ+R AVY +LA Sbjct 121 YGRFGMPVPDRHVLLGVPAEVAMQRAESRAAVDASRARDAYERDSDLQRRVDAVYRQLAE 180 Query 185 QGWGGRW 191 W W Sbjct 181 ADWTSPW 187 >gi|227505511|ref|ZP_03935560.1| thymidylate kinase [Corynebacterium striatum ATCC 6940] gi|227197875|gb|EEI77923.1| thymidylate kinase [Corynebacterium striatum ATCC 6940] Length=204 Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 99/199 (50%), Positives = 123/199 (62%), Gaps = 7/199 (3%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LI+IEG+DGAGK TLV+++ V L FPRY +SV A +A +AL+G GDL Sbjct 1 MLISIEGIDGAGKNTLVQRIKKELSV---EVNVLGFPRYEESVHAQLAQDALYGRMGDLT 57 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 S +AMATLFALDR GA + D++ILDRYVASNAAYSAARL + WV Sbjct 58 DSAFAMATLFALDRLGAKERLLAAQESKDLLILDRYVASNAAYSAARL---GTDEVIDWV 114 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +EF R GLPKP Q+ L ELA R+ RA+ D R RD YE+D+ LQ T A Y Sbjct 115 FDLEFGRFGLPKPQLQIFLDTDVELAAARATSRAEEDSTRVRDRYEKDSTLQANTAAAYR 174 Query 181 ELAAQGWGGRWLVVGADVD 199 LA + WGG+W + AD D Sbjct 175 RLAERKWGGQW-IATADTD 192 >gi|319949855|ref|ZP_08023867.1| thymidylate kinase [Dietzia cinnamea P4] gi|319436480|gb|EFV91588.1| thymidylate kinase [Dietzia cinnamea P4] Length=222 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 105/195 (54%), Positives = 128/195 (66%), Gaps = 1/195 (0%) Query 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASS 62 + +EG+DGAGK TL +L A G SV LAFPRYG ++ AD+AA+ALHG A S Sbjct 1 MVVEGLDGAGKNTLTTRLVAELDARGLSVGRLAFPRYG-TLHADLAADALHGGQAGAADS 59 Query 63 VYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQR 122 +AMA LFALDR A+ + GL +DVV+LDRYVASNAAY+AARL + + AW+ Sbjct 60 PHAMALLFALDRHAALDALAGLAAAHDVVLLDRYVASNAAYTAARLGPDREDEVIAWIGA 119 Query 123 IEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAEL 182 +EF RLGLP P Q+LL E+A ER+ R DPGRARD YERDA+LQ TG VY L Sbjct 120 LEFDRLGLPAPHLQLLLDTPVEVAAERAGTREAADPGRARDRYERDADLQAATGEVYRRL 179 Query 183 AAQGWGGRWLVVGAD 197 AA W W V+G D Sbjct 180 AAAAWSSPWRVLGTD 194 >gi|300789814|ref|YP_003770105.1| dTMP kinase [Amycolatopsis mediterranei U32] gi|299799328|gb|ADJ49703.1| dTMP kinase [Amycolatopsis mediterranei U32] gi|340531482|gb|AEK46687.1| thymidylate kinase [Amycolatopsis mediterranei S699] Length=217 Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 117/208 (57%), Positives = 144/208 (70%), Gaps = 2/208 (0%) Query 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 L+ IEG+DGAGKRTL + L+ A A G SV +LAFPRYG+SV AD+ EALH HGDLA Sbjct 7 LVVIEGLDGAGKRTLTDGLTAALGAKGASVTSLAFPRYGESVHADLVREALHRGHGDLAD 66 Query 62 SVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQ 121 SVY MA L+ALDR+GA I+ L +DVV+LDRYVASNAAY+AARL ++AAG+ WV Sbjct 67 SVYGMAMLYALDRSGAADRIRELRDAHDVVLLDRYVASNAAYAAARLRQDAAGEVVKWVW 126 Query 122 RIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAE 181 +E R GLP+PD +LL V+ +A ER+ RA+ + GR RD +E D LQ+R AVY E Sbjct 127 ELEVDRFGLPRPDAHLLLRVAPAVAAERAERRAETETGRERDAFETDDGLQRRCAAVYDE 186 Query 182 LAAQGWGGRWLVVG--ADVDPGRLAATL 207 LAA GW W V+ A VD LA TL Sbjct 187 LAATGWLAPWHVLDGVAGVDLEALATTL 214 >gi|255323824|ref|ZP_05364950.1| dTMP kinase [Corynebacterium tuberculostearicum SK141] gi|255299004|gb|EET78295.1| dTMP kinase [Corynebacterium tuberculostearicum SK141] Length=204 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 107/200 (54%), Positives = 130/200 (65%), Gaps = 7/200 (3%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LI+IEG+DGAGK TLV L +F R V +AFPRY S+ A +A +AL+G+ GDL Sbjct 1 MLISIEGIDGAGKNTLVSALKESF---DRPVEVIAFPRYADSIHAQLAQKALYGKMGDLT 57 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 S YAMATLFALDR G +Q VV+LDRYVASNAAYSAARL ++A + WV Sbjct 58 DSAYAMATLFALDRYGVKDQLQRAKESDTVVLLDRYVASNAAYSAARLEDDAVME---WV 114 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +EF L LP+ D QV L + E+A ER++ RAQ D R RD YERD LQ+RT A Y Sbjct 115 HDLEFGTLCLPQADLQVYLDTAVEVASERAQARAQADASRERDRYERDGGLQERTAAAYR 174 Query 181 ELAAQGWGGRWLVVGADVDP 200 LA GWGGRW+ AD D Sbjct 175 RLADAGWGGRWIAT-ADADT 193 >gi|311739824|ref|ZP_07713658.1| thymidylate kinase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304897|gb|EFQ80966.1| thymidylate kinase [Corynebacterium pseudogenitalium ATCC 33035] Length=204 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 106/200 (53%), Positives = 129/200 (65%), Gaps = 7/200 (3%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LI+IEG+DGAGK TLV L + R V +AFPRY S+ A +A +AL+G+ GDL Sbjct 1 MLISIEGIDGAGKNTLVSALKESL---DRPVEVIAFPRYADSIHAQLAQKALYGKMGDLT 57 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 S YAMATLFALDR G +Q VV+LDRYVASNAAYSAARL ++A + WV Sbjct 58 DSAYAMATLFALDRYGVKDQLQRAKESDTVVLLDRYVASNAAYSAARLEDDAVME---WV 114 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +EF L LP+ D QV L + E+A ER++ RAQ D R RD YERD LQ+RT A Y Sbjct 115 HNLEFGTLSLPQADLQVYLDTAVEVASERAQARAQADASRERDRYERDGGLQERTAAAYR 174 Query 181 ELAAQGWGGRWLVVGADVDP 200 LA GWGGRW+ AD D Sbjct 175 RLADAGWGGRWIAT-ADADT 193 >gi|331698936|ref|YP_004335175.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190] gi|326953625|gb|AEA27322.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190] Length=214 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 108/193 (56%), Positives = 134/193 (70%), Gaps = 0/193 (0%) Query 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 L+ IEG+DGAGKRTL + L A AAG S A LAFPRY V A++A +AL+G GDL+ Sbjct 4 LVVIEGLDGAGKRTLTDGLCAALDAAGASTARLAFPRYDDDVHAELARDALYGRLGDLSD 63 Query 62 SVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQ 121 SV+ MA LFALDR AV + L +DV+I+DRYVASNAAY+AARLH++A+G+ AWV+ Sbjct 64 SVHGMAVLFALDRRAAVPVLADLLAAHDVLIVDRYVASNAAYNAARLHQDASGEVVAWVR 123 Query 122 RIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAE 181 +E R GLP PD Q+LL V +A R+ GRA+ + GR RD YE D LQ RT AVYA+ Sbjct 124 ELEIERFGLPVPDLQLLLQVPQSVAAARAAGRARTEAGRDRDAYESDDALQARTAAVYAQ 183 Query 182 LAAQGWGGRWLVV 194 LAA W W VV Sbjct 184 LAAASWLSEWEVV 196 >gi|25027324|ref|NP_737378.1| thymidylate kinase [Corynebacterium efficiens YS-314] gi|259506538|ref|ZP_05749440.1| thymidylate kinase [Corynebacterium efficiens YS-314] gi|23492605|dbj|BAC17578.1| putative thymidylate kinase [Corynebacterium efficiens YS-314] gi|259165958|gb|EEW50512.1| thymidylate kinase [Corynebacterium efficiens YS-314] Length=203 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 105/207 (51%), Positives = 129/207 (63%), Gaps = 12/207 (5%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 ++I+IEG+DGAGK TLV L+ A ++FPRY S+ A +AAEALHG GDL Sbjct 1 MIISIEGIDGAGKNTLVRALTERIDAR-----VISFPRYDTSIHAQLAAEALHGRMGDLT 55 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 S +AMATLFALDR A+ + +++LDRYVASNAAY+AA AA WV Sbjct 56 DSAHAMATLFALDRHDALDELTAPG----LLLLDRYVASNAAYTAA---RLRDDAAATWV 108 Query 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 +EF RLGLP+P QVLL +LA ER+R R D R RD YE D+ LQ+RT A Y Sbjct 109 AELEFGRLGLPRPALQVLLDTPTDLAQERARRREASDGARTRDRYETDSGLQERTAAQYR 168 Query 181 ELAAQGWGGRWLVVGADVDPGRLAATL 207 LAAQGW WLV D DPG +AA + Sbjct 169 RLAAQGWQSPWLVAAPDEDPGHVAARI 195 >gi|227832501|ref|YP_002834208.1| Thymidylate kinase [Corynebacterium aurimucosum ATCC 700975] gi|262183633|ref|ZP_06043054.1| thymidylate kinase [Corynebacterium aurimucosum ATCC 700975] gi|227453517|gb|ACP32270.1| Thymidylate kinase [Corynebacterium aurimucosum ATCC 700975] Length=206 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 99/200 (50%), Positives = 121/200 (61%), Gaps = 8/200 (4%) Query 1 VLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 +LI+IEG+DGAGK T+ ++L V L+FPRY S+ A +A EAL+G GDL Sbjct 1 MLISIEGIDGAGKNTITQRLREELAC---DVEVLSFPRYEDSIHAQLAQEALYGRMGDLT 57 Query 61 SSVYAMATLFALDRAGAVHTIQGLCRGYD-VVILDRYVASNAAYSAARLHENAAGKAAAW 119 SVY MATLFALDR GA + D ++ILDRYVASNAAYS+AR+ W Sbjct 58 DSVYGMATLFALDRRGAKEQLLAAAESTDSLLILDRYVASNAAYSSARV---GGELIVDW 114 Query 120 VQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVY 179 + +EF R GLP P Q+ L LAG+R+ RA D GR RD YERDA LQ RT A Y Sbjct 115 IYELEFERFGLPVPQLQIFLDTDVALAGQRAVARAAEDEGRNRDRYERDAALQSRTAAAY 174 Query 180 AELAAQGWGGRWLVVGADVD 199 LA Q W G+W + AD D Sbjct 175 RRLAEQQWAGQW-IATADAD 193 Lambda K H 0.319 0.133 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 254328062080 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40