BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3256c Length=346 Score E Sequences producing significant alignments: (Bits) Value gi|15610392|ref|NP_217773.1| hypothetical protein Rv3256c [Mycob... 644 0.0 gi|339633266|ref|YP_004724908.1| hypothetical protein MAF_32670 ... 642 0.0 gi|289571483|ref|ZP_06451710.1| conserved hypothetical protein [... 518 7e-145 gi|15827330|ref|NP_301593.1| hypothetical protein ML0764 [Mycoba... 452 3e-125 gi|41409466|ref|NP_962302.1| hypothetical protein MAP3368c [Myco... 447 1e-123 gi|336459668|gb|EGO38603.1| hypothetical protein MAPs_01900 [Myc... 446 3e-123 gi|118462855|ref|YP_883361.1| hypothetical protein MAV_4219 [Myc... 446 3e-123 gi|342861459|ref|ZP_08718106.1| hypothetical protein MCOL_21341 ... 444 7e-123 gi|183981308|ref|YP_001849599.1| hypothetical protein MMAR_1286 ... 444 1e-122 gi|118618071|ref|YP_906403.1| hypothetical protein MUL_2601 [Myc... 438 5e-121 gi|296168949|ref|ZP_06850618.1| TobH protein [Mycobacterium para... 430 2e-118 gi|240172600|ref|ZP_04751259.1| hypothetical protein MkanA1_2502... 426 4e-117 gi|118469644|ref|YP_886205.1| TobH protein [Mycobacterium smegma... 402 3e-110 gi|145225303|ref|YP_001135981.1| hypothetical protein Mflv_4725 ... 367 1e-99 gi|315445601|ref|YP_004078480.1| hypothetical protein Mspyr1_405... 365 8e-99 gi|126433967|ref|YP_001069658.1| hypothetical protein Mjls_1365 ... 362 5e-98 gi|333991645|ref|YP_004524259.1| hypothetical protein JDM601_300... 361 8e-98 gi|108798300|ref|YP_638497.1| hypothetical protein Mmcs_1329 [My... 346 3e-93 gi|120402738|ref|YP_952567.1| hypothetical protein Mvan_1738 [My... 343 3e-92 gi|169630682|ref|YP_001704331.1| hypothetical protein MAB_3602c ... 299 5e-79 gi|254823003|ref|ZP_05228004.1| hypothetical protein MintA_23949... 294 1e-77 gi|54026599|ref|YP_120841.1| hypothetical protein nfa46260 [Noca... 234 1e-59 gi|325675685|ref|ZP_08155369.1| hypothetical protein HMPREF0724_... 234 2e-59 gi|111023280|ref|YP_706252.1| hypothetical protein RHA1_ro06317 ... 233 3e-59 gi|312140685|ref|YP_004008021.1| hypothetical protein REQ_33460 ... 233 4e-59 gi|226365788|ref|YP_002783571.1| hypothetical protein ROP_63790 ... 226 4e-57 gi|333921458|ref|YP_004495039.1| hypothetical protein AS9A_3801 ... 197 2e-48 gi|229489392|ref|ZP_04383255.1| TobH protein [Rhodococcus erythr... 194 1e-47 gi|226305645|ref|YP_002765605.1| hypothetical protein RER_21580 ... 191 2e-46 gi|326381472|ref|ZP_08203166.1| hypothetical protein SCNU_00935 ... 180 2e-43 gi|296138915|ref|YP_003646158.1| hypothetical protein Tpau_1188 ... 176 7e-42 gi|296393060|ref|YP_003657944.1| hypothetical protein Srot_0631 ... 173 5e-41 gi|254821372|ref|ZP_05226373.1| hypothetical protein MintA_15652... 169 9e-40 gi|262203187|ref|YP_003274395.1| hypothetical protein Gbro_3298 ... 151 2e-34 gi|343926914|ref|ZP_08766407.1| hypothetical protein GOALK_072_0... 144 2e-32 gi|257057070|ref|YP_003134902.1| hypothetical protein Svir_31000... 138 1e-30 gi|331698950|ref|YP_004335189.1| hypothetical protein Psed_5199 ... 134 3e-29 gi|317506114|ref|ZP_07963939.1| zinc finger protein [Segniliparu... 130 3e-28 gi|256380313|ref|YP_003103973.1| hypothetical protein Amir_6325 ... 127 2e-27 gi|302530041|ref|ZP_07282383.1| predicted protein [Streptomyces ... 124 2e-26 gi|134102891|ref|YP_001108552.1| hypothetical protein SACE_6458 ... 121 1e-25 gi|66969194|gb|AAY59890.1| TobH [Streptoalloteichus tenebrarius] 117 3e-24 gi|300789828|ref|YP_003770119.1| hypothetical protein AMED_8013 ... 116 4e-24 gi|325000905|ref|ZP_08122017.1| hypothetical protein PseP1_19167... 107 3e-21 gi|152967782|ref|YP_001363566.1| RpiR family transcriptional reg... 87.4 3e-15 gi|302534799|ref|ZP_07287141.1| SIS regulatory protein [Streptom... 87.0 4e-15 gi|291453727|ref|ZP_06593117.1| conserved hypothetical protein [... 86.7 5e-15 gi|145294909|ref|YP_001137730.1| hypothetical protein cgR_0856 [... 86.7 6e-15 gi|344043752|gb|EGV39440.1| hypothetical protein CgS9114_13276 [... 85.5 1e-14 gi|19551975|ref|NP_599977.1| hypothetical protein NCgl0715 [Cory... 85.5 1e-14 >gi|15610392|ref|NP_217773.1| hypothetical protein Rv3256c [Mycobacterium tuberculosis H37Rv] gi|15842845|ref|NP_337882.1| hypothetical protein MT3354 [Mycobacterium tuberculosis CDC1551] gi|31794436|ref|NP_856929.1| hypothetical protein Mb3284c [Mycobacterium bovis AF2122/97] 73 more sequence titles Length=346 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/346 (99%), Positives = 346/346 (100%), Gaps = 0/346 (0%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 +NVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW Sbjct 1 MNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI Sbjct 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 Query 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR Sbjct 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM Sbjct 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 Query 241 LRIANQVVAATRLSDAVVALRAGTPPDALFHDEEIDGPAPQRLRVLALALAGERTVVAAR 300 LRIANQVVAATRLSDAVVALRAGTPPDALFHDEEIDGPAPQRLRVLALALAGERTVVAAR Sbjct 241 LRIANQVVAATRLSDAVVALRAGTPPDALFHDEEIDGPAPQRLRVLALALAGERTVVAAR 300 Query 301 VAGLDDAYLVAAEDVPELLDAPVGSGGAVLAVRLEMAAVYLRLVRG 346 VAGLDDAYLVAAEDVPELLDAPVGSGGAVLAVRLEMAAVYLRLVRG Sbjct 301 VAGLDDAYLVAAEDVPELLDAPVGSGGAVLAVRLEMAAVYLRLVRG 346 >gi|339633266|ref|YP_004724908.1| hypothetical protein MAF_32670 [Mycobacterium africanum GM041182] gi|339332622|emb|CCC28337.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=346 Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/346 (99%), Positives = 345/346 (99%), Gaps = 0/346 (0%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 +NVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW Sbjct 1 MNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 V GRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI Sbjct 61 VAGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 Query 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR Sbjct 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM Sbjct 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 Query 241 LRIANQVVAATRLSDAVVALRAGTPPDALFHDEEIDGPAPQRLRVLALALAGERTVVAAR 300 LRIANQVVAATRLSDAVVALRAGTPPDALFHDEEIDGPAPQRLRVLALALAGERTVVAAR Sbjct 241 LRIANQVVAATRLSDAVVALRAGTPPDALFHDEEIDGPAPQRLRVLALALAGERTVVAAR 300 Query 301 VAGLDDAYLVAAEDVPELLDAPVGSGGAVLAVRLEMAAVYLRLVRG 346 VAGLDDAYLVAAEDVPELLDAPVGSGGAVLAVRLEMAAVYLRLVRG Sbjct 301 VAGLDDAYLVAAEDVPELLDAPVGSGGAVLAVRLEMAAVYLRLVRG 346 >gi|289571483|ref|ZP_06451710.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289545237|gb|EFD48885.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=304 Score = 518 bits (1333), Expect = 7e-145, Method: Compositional matrix adjust. Identities = 276/279 (99%), Positives = 277/279 (99%), Gaps = 0/279 (0%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 +NVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW Sbjct 1 MNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI Sbjct 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 Query 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR Sbjct 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM Sbjct 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 Query 241 LRIANQVVAATRLSDAVVALRAGTPPDALFHDEEIDGPA 279 LRIANQVVAATRLSDAVVALRAGTPPDALFHDEEI PA Sbjct 241 LRIANQVVAATRLSDAVVALRAGTPPDALFHDEEIGWPA 279 >gi|15827330|ref|NP_301593.1| hypothetical protein ML0764 [Mycobacterium leprae TN] gi|221229808|ref|YP_002503224.1| hypothetical protein MLBr_00764 [Mycobacterium leprae Br4923] gi|13092879|emb|CAC30273.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932915|emb|CAR70858.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=365 Score = 452 bits (1163), Expect = 3e-125, Method: Compositional matrix adjust. Identities = 276/368 (75%), Positives = 299/368 (82%), Gaps = 25/368 (6%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 +N R IDLEDT+GLIAADR LLRAAS AGAQVRAIAAAA+EG L+ LR DRPR+VIW Sbjct 1 MNATRLIDLEDTKGLIAADRDGLLRAASSAGAQVRAIAAAAEEGALETLRAHDRPRTVIW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 V GRGTAETAG +LA+T G EPIV+AS APPWVGPLDVLIVAGDDPGDPALVGAAA Sbjct 61 VAGRGTAETAGAMLAATSGGATTEPIVVASEAPPWVGPLDVLIVAGDDPGDPALVGAAAT 120 Query 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 V RGARVVVVAPYEGPLRD+TAGRVAVLEPRLR+P+EFGL RYLAAGLAALQTVDP+LR Sbjct 121 AVGRGARVVVVAPYEGPLRDATAGRVAVLEPRLRIPNEFGLCRYLAAGLAALQTVDPRLR 180 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 +DLA LADELD+EAL NS G EVFTNPAK LAA VSG ++ALAGD AATLALARHGSSV+ Sbjct 181 LDLAMLADELDSEALHNSVGYEVFTNPAKTLAASVSGHRVALAGDCAATLALARHGSSVL 240 Query 241 LRIANQVVAATRLSDAVVALRAG--------TPPDALFHDEEIDGPAPQRLRVLALALAG 292 LRIA+QV +AT LSDAVVA+R+ T D LFHDEEIDG P+RLRVLAL LA Sbjct 241 LRIAHQVTSATGLSDAVVAVRSSVDVADYAPTSVDVLFHDEEIDGSLPERLRVLALTLAS 300 Query 293 ERTVVAARVAGLDDAYLVAAEDVPELLDAPVG------SGG--------AVLAVRLEMAA 338 ERTVVAARV GLDD YLVAAEDVP D P G SGG A+LAVRLEMAA Sbjct 301 ERTVVAARVVGLDDVYLVAAEDVP---DGPSGLAGLPVSGGADRAEQELAMLAVRLEMAA 357 Query 339 VYLRLVRG 346 VYLRLVRG Sbjct 358 VYLRLVRG 365 >gi|41409466|ref|NP_962302.1| hypothetical protein MAP3368c [Mycobacterium avium subsp. paratuberculosis K-10] gi|254776655|ref|ZP_05218171.1| hypothetical protein MaviaA2_18581 [Mycobacterium avium subsp. avium ATCC 25291] gi|41398297|gb|AAS05918.1| hypothetical protein MAP_3368c [Mycobacterium avium subsp. paratuberculosis K-10] Length=366 Score = 447 bits (1150), Expect = 1e-123, Method: Compositional matrix adjust. Identities = 266/369 (73%), Positives = 294/369 (80%), Gaps = 26/369 (7%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 +N RAIDLEDTEGL++ADR LLRAAS AGAQVRAIA A +EG L+ LR DRPRSVIW Sbjct 1 MNATRAIDLEDTEGLLSADRDGLLRAASSAGAQVRAIATAVEEGALEPLRVEDRPRSVIW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 V GRGTAETAG +L++TLG A++P LA APPWVGPLDVL+VAGDDPGDPALV AAA Sbjct 61 VAGRGTAETAGVMLSATLGGVASQPFALAGEAPPWVGPLDVLVVAGDDPGDPALVAAAAT 120 Query 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 GVRRGARVVVVAPYEGPLRDSTAGR AVL PRL VPDEFGL RYLAAGLA + VDP+ Sbjct 121 GVRRGARVVVVAPYEGPLRDSTAGRAAVLAPRLWVPDEFGLCRYLAAGLAVVHAVDPRPS 180 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 +DL LADELDAEALRNSAGRE+FTNPAK LAAR++ Q+ALAGD+AATLALARHGSSV+ Sbjct 181 VDLGLLADELDAEALRNSAGRELFTNPAKLLAARIADRQVALAGDSAATLALARHGSSVL 240 Query 241 LRIANQVVAATRLSDAVVALRAGTP-----PD-ALFHDEEIDGPAPQRLRVLALALAGER 294 LR+ANQV AT L+DAVVA+RA P PD ALFHDE+IDGP P RLRVLA+ LA E+ Sbjct 241 LRVANQVTPATGLADAVVAMRAAVPRALEDPDAALFHDEQIDGPLPPRLRVLAVVLAAEQ 300 Query 295 TVVAARVAGLDDAYLVAAEDVPELLDAPVGSGG-----------------AVLAVRLEMA 337 TVVAAR AGLDD YL+AAEDVP D P GS G AVLAVRLEMA Sbjct 301 TVVAARTAGLDDVYLLAAEDVP---DGPGGSAGSGVSPALGGPGRTEQQLAVLAVRLEMA 357 Query 338 AVYLRLVRG 346 AVY+RLVRG Sbjct 358 AVYMRLVRG 366 >gi|336459668|gb|EGO38603.1| hypothetical protein MAPs_01900 [Mycobacterium avium subsp. paratuberculosis S397] Length=366 Score = 446 bits (1147), Expect = 3e-123, Method: Compositional matrix adjust. Identities = 265/369 (72%), Positives = 294/369 (80%), Gaps = 26/369 (7%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 +N RAIDLEDTEGL++ADR LLRAAS AGAQVRAIA A +EG L+ LR DRPRSVIW Sbjct 1 MNATRAIDLEDTEGLLSADRDGLLRAASSAGAQVRAIATAVEEGALEPLRVEDRPRSVIW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 V GRGTAETAG +L++TLG A++P LA APPWVGPLDVL+VAGDDPGDPALV AAA Sbjct 61 VAGRGTAETAGVMLSATLGGVASQPFALAGEAPPWVGPLDVLVVAGDDPGDPALVAAAAT 120 Query 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 GVRRGARVVVVAPYEGPLRDSTAGR AVL PRL VPDEFGL RYLAAGLA + VDP+ Sbjct 121 GVRRGARVVVVAPYEGPLRDSTAGRAAVLAPRLWVPDEFGLCRYLAAGLAVVHAVDPRPS 180 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 +DL LADELDAEALRNSAGRE+FTNPAK LAAR++ Q+ALAGD+AATLALARHGSSV+ Sbjct 181 VDLGLLADELDAEALRNSAGRELFTNPAKLLAARIADRQVALAGDSAATLALARHGSSVL 240 Query 241 LRIANQVVAATRLSDAVVALRAGTP-----PD-ALFHDEEIDGPAPQRLRVLALALAGER 294 LR+ANQV AT L+DAVVA+RA P PD ALFHDE+IDGP P RLRVLA+ LA E+ Sbjct 241 LRVANQVTPATGLADAVVAMRAAVPRALEDPDAALFHDEQIDGPLPPRLRVLAVVLAAEQ 300 Query 295 TVVAARVAGLDDAYLVAAEDVPELLDAPVGSGG-----------------AVLAVRLEMA 337 TVVAAR AGLDD YL+AAEDVP D P GS G AVLAVRLEMA Sbjct 301 TVVAARTAGLDDVYLLAAEDVP---DGPGGSAGSGVSPALGGPGRTEQQLAVLAVRLEMA 357 Query 338 AVYLRLVRG 346 AVY+RLV+G Sbjct 358 AVYMRLVQG 366 >gi|118462855|ref|YP_883361.1| hypothetical protein MAV_4219 [Mycobacterium avium 104] gi|118164142|gb|ABK65039.1| conserved hypothetical protein [Mycobacterium avium 104] Length=366 Score = 446 bits (1146), Expect = 3e-123, Method: Compositional matrix adjust. Identities = 265/369 (72%), Positives = 294/369 (80%), Gaps = 26/369 (7%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 +N RAIDLEDTEGL++ADR LLRAAS AGAQVRAIA A +EG L+ LR DRPRSVIW Sbjct 1 MNATRAIDLEDTEGLLSADRDGLLRAASSAGAQVRAIATAVEEGALEPLRVEDRPRSVIW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 V GRGTAETAG +L++TLG A++P LA APPWVGPLDVL+VAGDDPGDPALV AAA Sbjct 61 VAGRGTAETAGVMLSATLGGVASQPFALAGEAPPWVGPLDVLVVAGDDPGDPALVAAAAT 120 Query 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 GVRRGARVVVVAPYEGPLRDSTAGR AVL PRL VPDEFGL RYLAAGLA + VDP+ Sbjct 121 GVRRGARVVVVAPYEGPLRDSTAGRAAVLAPRLWVPDEFGLCRYLAAGLAVVHAVDPRPS 180 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 +DL LADELDAEALRNSAGRE+FTNPAK LAAR++ Q+ALAGD+AATLALARHGSSV+ Sbjct 181 VDLGLLADELDAEALRNSAGRELFTNPAKLLAARIADRQVALAGDSAATLALARHGSSVL 240 Query 241 LRIANQVVAATRLSDAVVALRAGTP-----PD-ALFHDEEIDGPAPQRLRVLALALAGER 294 LR+ANQV AT L+DAVVA+RA P PD ALFHD++IDGP P RLRVLA+ LA E+ Sbjct 241 LRVANQVTPATGLADAVVAMRAAVPRALEDPDAALFHDDQIDGPLPPRLRVLAVVLAAEQ 300 Query 295 TVVAARVAGLDDAYLVAAEDVPELLDAPVGSGG-----------------AVLAVRLEMA 337 TVVAAR AGLDD YL+AAEDVP D P GS G AVLAVRLEMA Sbjct 301 TVVAARTAGLDDVYLLAAEDVP---DGPGGSAGSGVSPALGGPGRTEQQLAVLAVRLEMA 357 Query 338 AVYLRLVRG 346 AVY+RLVRG Sbjct 358 AVYMRLVRG 366 >gi|342861459|ref|ZP_08718106.1| hypothetical protein MCOL_21341 [Mycobacterium colombiense CECT 3035] gi|342130948|gb|EGT84237.1| hypothetical protein MCOL_21341 [Mycobacterium colombiense CECT 3035] Length=366 Score = 444 bits (1143), Expect = 7e-123, Method: Compositional matrix adjust. Identities = 262/369 (72%), Positives = 289/369 (79%), Gaps = 26/369 (7%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 +N RAIDLEDTEGL+AADR LLRAAS AGAQVRA+AAA DEG LDLLR DRPRSVIW Sbjct 1 MNATRAIDLEDTEGLLAADRDGLLRAASSAGAQVRAVAAAVDEGALDLLRADDRPRSVIW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 V GRGTAETAGTILA+TLG A++P LA+ APPW GPLDVLIVAG +PGDPALV AAA Sbjct 61 VAGRGTAETAGTILAATLGGTASQPFTLANEAPPWAGPLDVLIVAGGEPGDPALVAAAAT 120 Query 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 G+RRGARVVV APYEGPLRD+TAGR AVL PRL V DEFGL RYLAAGLA L VDP+ + Sbjct 121 GLRRGARVVVAAPYEGPLRDATAGRAAVLAPRLSVSDEFGLCRYLAAGLAVLHAVDPRPK 180 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 +DLA LADELDAEALRNSA RE+FTNPAK LAAR++ Q+ALAGD AATLALARHGSSV+ Sbjct 181 VDLAVLADELDAEALRNSATRELFTNPAKLLAARIAERQVALAGDGAATLALARHGSSVL 240 Query 241 LRIANQVVAATRLSDAVVALRAGT------PPDALFHDEEIDGPAPQRLRVLALALAGER 294 LR+ANQV A L+DA+VALRA P ALFHDEEIDGP P+RLRVL + LA E+ Sbjct 241 LRVANQVTPAAGLADALVALRAAASDGYQDPDAALFHDEEIDGPLPERLRVLTVVLAAEQ 300 Query 295 TVVAARVAGLDDAYLVAAEDVPELLDAPVGSGG-----------------AVLAVRLEMA 337 VAAR AGLD+ YL+AAEDVP D P GS G AVLAVRLEMA Sbjct 301 AGVAARTAGLDNVYLLAAEDVP---DGPGGSAGYGVSPALGGPGSPEQQLAVLAVRLEMA 357 Query 338 AVYLRLVRG 346 AVY+RLVRG Sbjct 358 AVYMRLVRG 366 >gi|183981308|ref|YP_001849599.1| hypothetical protein MMAR_1286 [Mycobacterium marinum M] gi|183174634|gb|ACC39744.1| conserved hypothetical protein [Mycobacterium marinum M] Length=369 Score = 444 bits (1141), Expect = 1e-122, Method: Compositional matrix adjust. Identities = 263/369 (72%), Positives = 293/369 (80%), Gaps = 23/369 (6%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 + +AIDLED +GLIAADR LLRAAS AGAQVRAIAAA+DEGELD L DRPR+VIW Sbjct 1 MKATQAIDLEDADGLIAADRDGLLRAASTAGAQVRAIAAASDEGELDSLNIDDRPRTVIW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 V GRGTA+TAG +LA+TLGA PI +A+ APPWVGPLDV++VAGDDPGDPALVGAAA+ Sbjct 61 VAGRGTAQTAGDMLAATLGATVGAPITIATEAPPWVGPLDVMVVAGDDPGDPALVGAAAM 120 Query 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 GVRRGARVV+ AP EGPLRD AGR AVL PRL VPDEFGL RYLAAGLA L+TVDPKLR Sbjct 121 GVRRGARVVIAAPNEGPLRDCAAGRAAVLAPRLSVPDEFGLCRYLAAGLAVLRTVDPKLR 180 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 IDLA+LAD+LDAE L NSAGREVFTNPAKALAAR+SG ++ LA D AATLALARHGSSV+ Sbjct 181 IDLAALADDLDAETLCNSAGREVFTNPAKALAARISGRRIVLAADGAATLALARHGSSVL 240 Query 241 LRIANQVVAATRLSDAVVALRAGTPP------DALFHDEEIDGPAPQRLRVLALALAGER 294 LRIA+QV AAT L+DAVVALRAG DALFHDEEIDGP P+++RVLAL LA ER Sbjct 241 LRIAHQVTAATWLADAVVALRAGAASGYDDGVDALFHDEEIDGPRPEQMRVLALTLAAER 300 Query 295 TVVAARVAGLDDAYLVAAEDVPELLDAPVGSGG-----------------AVLAVRLEMA 337 TVV ARVAGLD+ L+AAED ++ P G G AVLAVRLEMA Sbjct 301 TVVGARVAGLDNIDLIAAEDAAQVPGGPGGPAGSDRAPAPTAAPRAEQQLAVLAVRLEMA 360 Query 338 AVYLRLVRG 346 AVYLRLVRG Sbjct 361 AVYLRLVRG 369 >gi|118618071|ref|YP_906403.1| hypothetical protein MUL_2601 [Mycobacterium ulcerans Agy99] gi|118570181|gb|ABL04932.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=369 Score = 438 bits (1127), Expect = 5e-121, Method: Compositional matrix adjust. Identities = 262/369 (72%), Positives = 291/369 (79%), Gaps = 23/369 (6%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 + +AIDLED +GLIAADR LLRAAS AGAQVRAIAAA+DEGELD L DRPR+VIW Sbjct 1 MKATQAIDLEDADGLIAADRDGLLRAASTAGAQVRAIAAASDEGELDSLNIDDRPRTVIW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 V GRGTA+TAG +LA+TLGA PI +A+ APPWVGPLDV++VAGDDPGDPALVGAAA+ Sbjct 61 VPGRGTAQTAGDMLAATLGATVGAPITIATEAPPWVGPLDVMVVAGDDPGDPALVGAAAM 120 Query 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 GVRRGARVVV AP EGPLRD AGR AVL PRL VPDEFGL RYLAAGLA L+TV PKLR Sbjct 121 GVRRGARVVVAAPNEGPLRDCAAGRAAVLAPRLSVPDEFGLCRYLAAGLAVLRTVAPKLR 180 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 IDLA+LAD+LDAE L NSAGREVFTNPAKALAAR+SG ++ LA D AATLALARHGSS + Sbjct 181 IDLAALADDLDAETLCNSAGREVFTNPAKALAARISGRRIVLAADGAATLALARHGSSAL 240 Query 241 LRIANQVVAATRLSDAVVALRAGTPP------DALFHDEEIDGPAPQRLRVLALALAGER 294 LRIA+QV AAT L+DAVVALRAG DALFHDEEIDGP P+++RVLAL LA ER Sbjct 241 LRIAHQVTAATWLADAVVALRAGAASGYDDGVDALFHDEEIDGPRPEQMRVLALTLAAER 300 Query 295 TVVAARVAGLDDAYLVAAEDVPELLDAPVGSGG-----------------AVLAVRLEMA 337 TVV ARVAGLD+ L+AAED ++ P G G AVLAVRLEMA Sbjct 301 TVVGARVAGLDNIDLIAAEDAAQVPGGPGGPAGSDRAPAPTAAPRAEQQLAVLAVRLEMA 360 Query 338 AVYLRLVRG 346 AVYLRLVRG Sbjct 361 AVYLRLVRG 369 >gi|296168949|ref|ZP_06850618.1| TobH protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896418|gb|EFG76071.1| TobH protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=366 Score = 430 bits (1105), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 256/369 (70%), Positives = 288/369 (79%), Gaps = 26/369 (7%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 +N AIDLED EGL+AADR LLR+AS AGAQVRAI AA DEG LD LR RPRS++W Sbjct 1 MNAVGAIDLEDAEGLLAADRDGLLRSASSAGAQVRAITAAVDEGALDSLRADGRPRSLVW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 V GRGTA+ AG ILA+T+G A+EPI LA+ PPW+GPLDVLIVAGDDPGDPAL AAA+ Sbjct 61 VAGRGTADNAGAILAATVGGTASEPIALAAEVPPWIGPLDVLIVAGDDPGDPALTAAAAM 120 Query 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 G RRGARVVV APYEGPLRD+TAGR AVL PRL +PDEFGL RYLAAGLA + V+ + Sbjct 121 GARRGARVVVAAPYEGPLRDATAGRAAVLAPRLPIPDEFGLCRYLAAGLAVVHAVEQRPG 180 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 DL +LADELDAEALRNSAGRE+FTNPAK +AAR++G Q+ALAGD AATLALARHGSSV+ Sbjct 181 TDLRALADELDAEALRNSAGRELFTNPAKTIAARMAGRQVALAGDCAATLALARHGSSVL 240 Query 241 LRIANQVVAATRLSDAVVALRA------GTPPDALFHDEEIDGPAPQRLRVLALALAGER 294 LRIA++VVAAT LSDAVVALRA G P DALFHDE+IDGP P+RL VLAL L+GE+ Sbjct 241 LRIAHEVVAATGLSDAVVALRAGPSGGFGDPADALFHDEQIDGPLPRRLLVLALTLSGEQ 300 Query 295 TVVAARVAGLDDAYLVAAEDVPELLDAPVGSGG-----------------AVLAVRLEMA 337 +VAAR AGLDD YL+AAEDVP D P GS G AVLAVRLEMA Sbjct 301 PIVAARTAGLDDVYLLAAEDVP---DGPGGSAGSTVAPALGGAISAEQQLAVLAVRLEMA 357 Query 338 AVYLRLVRG 346 AVY RL RG Sbjct 358 AVYARLARG 366 >gi|240172600|ref|ZP_04751259.1| hypothetical protein MkanA1_25020 [Mycobacterium kansasii ATCC 12478] Length=366 Score = 426 bits (1094), Expect = 4e-117, Method: Compositional matrix adjust. Identities = 276/368 (75%), Positives = 298/368 (81%), Gaps = 24/368 (6%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 ++ +++DLED +GLIAADR LLRAAS AGAQVRAIAAA DEGELDLLRG DRPR+VIW Sbjct 1 MSAVQSVDLEDADGLIAADRDGLLRAASTAGAQVRAIAAAHDEGELDLLRGGDRPRTVIW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAI 120 V GRG AETAG +L STL A AAEPI LA APPWVGPLDVLIVAGDDPGDPALV AAA Sbjct 61 VGGRGPAETAGAMLVSTLAAAAAEPIALAREAPPWVGPLDVLIVAGDDPGDPALVAAAAT 120 Query 121 GVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR 180 GVRRGARVVVVAPY G LRDSTAGRVAVLEPRLRVPDEFGL RYLAAGLAAL TVDP+L+ Sbjct 121 GVRRGARVVVVAPYAGALRDSTAGRVAVLEPRLRVPDEFGLCRYLAAGLAALSTVDPRLQ 180 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 +DLASLADELDAEAL NSAGREVFTNPAK LAARVSG ++AL GDN+ATLALARHGSSV+ Sbjct 181 VDLASLADELDAEALHNSAGREVFTNPAKTLAARVSGRRVALTGDNSATLALARHGSSVL 240 Query 241 LRIANQVVAATRLSDAVVALRAGTPP-------DALFHDEEIDGPAPQRLRVLALALAGE 293 LRIA QV AA L+DAVVALRAG D LFHDE+IDGP P+R+RVLAL LAGE Sbjct 241 LRIAQQVAAAAWLADAVVALRAGVAAGAAGYSGDTLFHDEQIDGPLPERMRVLALTLAGE 300 Query 294 RTVVAARVAGLDDAYLVAAEDVPELLDAPV-GSGG--------------AVLAVRLEMAA 338 RTVV AR+AGLDD YLV AED + D V GS G A+LAVRLEMAA Sbjct 301 RTVVGARIAGLDDIYLVTAEDATQ--DPGVAGSDGLLIPADAQRPEQQLAILAVRLEMAA 358 Query 339 VYLRLVRG 346 VYLRL RG Sbjct 359 VYLRLARG 366 >gi|118469644|ref|YP_886205.1| TobH protein [Mycobacterium smegmatis str. MC2 155] gi|118170931|gb|ABK71827.1| TobH protein [Mycobacterium smegmatis str. MC2 155] Length=360 Score = 402 bits (1034), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 229/355 (65%), Positives = 266/355 (75%), Gaps = 17/355 (4%) Query 7 IDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGT 66 +DL+D +GL+AADRG LLRAA+MAGAQVRA AAA DEG D LR D R+VIWV GRGT Sbjct 8 VDLDDGDGLLAADRGGLLRAAAMAGAQVRATAAALDEGLFDPLRADDPARTVIWVAGRGT 67 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 AE AG +LA+TLG AA P+VLAS APPW+G LDVLIVAGDDPGDPALV AAA+GVRRGA Sbjct 68 AEHAGAVLAATLGPSAAAPVVLASEAPPWIGALDVLIVAGDDPGDPALVNAAAMGVRRGA 127 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTV------DPKLR 180 RVVV APYEGPLRD +AGR V+EPRL VPD+F RYLA GLAAL TV DP Sbjct 128 RVVVAAPYEGPLRDVSAGRAVVIEPRLWVPDDFAFVRYLAVGLAALHTVNRDRSRDPH-- 185 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 DL +LADELDAEALRNSA R++FTN AK L R+SG + LAGD AATLALARHG+++M Sbjct 186 ADLTALADELDAEALRNSAARDLFTNAAKTLVERMSGADVVLAGDTAATLALARHGATMM 245 Query 241 LRIANQVVAATRLSDAVVALRAGTPPDA----LFHDEEIDGPAPQRLRVLALALAGERTV 296 LRIA +VV+A L+D + ALR+G DA LFHDEEIDGP P R+R L L ER Sbjct 246 LRIAGEVVSAVGLADVLAALRSGARGDAGTRSLFHDEEIDGPLPDRMRTLVLTTDVERAA 305 Query 297 VAARVAGLDDAYLVAAEDVPELLDAPVGSGG-----AVLAVRLEMAAVYLRLVRG 346 VAAR+AG DD + A+DVP+ + + +G A+LAVRLEMAAVY +LVRG Sbjct 306 VAARIAGYDDISAIGADDVPDSTETTLPAGRPEQQVAILAVRLEMAAVYSKLVRG 360 >gi|145225303|ref|YP_001135981.1| hypothetical protein Mflv_4725 [Mycobacterium gilvum PYR-GCK] gi|145217789|gb|ABP47193.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=369 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 207/361 (58%), Positives = 253/361 (71%), Gaps = 22/361 (6%) Query 7 IDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGT 66 +DL+D EGL+AADR LLRAASMAGAQVRA AAA EG+LD +R PR+V+WV G GT Sbjct 10 VDLDDGEGLLAADRHGLLRAASMAGAQVRATAAALTEGDLDAVRSDSPPRTVVWVAGPGT 69 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 AE AG +LA+ LG PIV+A+ APPW+G LDV+++AGDDP P LV AAA VRRGA Sbjct 70 AEAAGMMLAAILGGSVGAPIVVAAEAPPWIGALDVVVLAGDDPARPELVTAAATAVRRGA 129 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRIDLASL 186 R+VVVAPYEGPLRD+TAGR + PRL VPD+F L RY AAGLA L V P +DL ++ Sbjct 130 RIVVVAPYEGPLRDATAGRSVSIPPRLPVPDDFALVRYFAAGLAVLHVVLPGFSVDLPAI 189 Query 187 ADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRIANQ 246 AD LD EA RNSAGRE+FTNPAK LA R+ + LAGD+AAT++LARH +VMLR+ +Q Sbjct 190 ADALDEEAFRNSAGRELFTNPAKVLAERMRDHDVVLAGDSAATISLARHACTVMLRVGHQ 249 Query 247 VVAATRLSDAVVALRAGTPPD-----ALFHDEEIDGPAPQRLRVLALALAGERTVVAARV 301 VVA+ LSDA+VA+ G ++FHDEE+DGP PQ+ R + L ER V+AR+ Sbjct 250 VVASAGLSDALVAIGTGWGRAGGGEASIFHDEELDGPLPQQGRTVVLTTDAERHNVSARL 309 Query 302 AGLDDAYLVAAEDVPELLDAPVGSGG----------------AVLAVRLEMAAVYLRLVR 345 G DD Y+V A DVP++ AP G+ A+LAVRLEMAAVY RLVR Sbjct 310 RGFDDVYVVNANDVPDVA-APGGNSEPGSATTPGSARPEQQLALLAVRLEMAAVYRRLVR 368 Query 346 G 346 G Sbjct 369 G 369 >gi|315445601|ref|YP_004078480.1| hypothetical protein Mspyr1_40590 [Mycobacterium sp. Spyr1] gi|315263904|gb|ADU00646.1| hypothetical protein Mspyr1_40590 [Mycobacterium sp. Spyr1] Length=369 Score = 365 bits (936), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 206/361 (58%), Positives = 251/361 (70%), Gaps = 22/361 (6%) Query 7 IDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGT 66 +DL+D EGL+AADR LLRAASMAGAQVRA AAA EG+LD +R PR+V+WV G GT Sbjct 10 VDLDDGEGLLAADRHGLLRAASMAGAQVRATAAALTEGDLDAVRSDSPPRTVVWVAGPGT 69 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 AE AG +LA+ LG PIV+A+ APPW+G LDV+++AGDDP P LV AAA VRRGA Sbjct 70 AEAAGMMLAAILGGSVGAPIVVAAEAPPWIGALDVVVLAGDDPARPELVTAAATAVRRGA 129 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRIDLASL 186 R+VVVAPYEGPLRD+TAGR + PRL VPD+F L RY AAGLA L V P +DL ++ Sbjct 130 RIVVVAPYEGPLRDATAGRSVSIPPRLPVPDDFALVRYFAAGLAVLHVVLPGFSVDLPAI 189 Query 187 ADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRIANQ 246 AD LD EA RNSAGRE+FTNPAK LA R+ + LAGD+AAT++LARH +VMLR+ +Q Sbjct 190 ADALDEEAFRNSAGRELFTNPAKVLAERMRDHDVVLAGDSAATISLARHACTVMLRVGHQ 249 Query 247 VVAATRLSDAVVALRAGTPPD-----ALFHDEEIDGPAPQRLRVLALALAGERTVVAARV 301 VVA LSD +VA+ G ++FHDEE+DGP PQ+ R + L ER V+AR+ Sbjct 250 VVAPAGLSDTLVAIGTGWGRAGGGEASIFHDEELDGPLPQQGRTVVLTTDAERHNVSARL 309 Query 302 AGLDDAYLVAAEDVPELLDAPVGSGG----------------AVLAVRLEMAAVYLRLVR 345 G DD Y+V A DVP++ AP G+ A+LAVRLEMAAVY RLVR Sbjct 310 RGFDDVYVVNANDVPDVA-APGGNSEPGSATTPGSARPEQQLALLAVRLEMAAVYRRLVR 368 Query 346 G 346 G Sbjct 369 G 369 >gi|126433967|ref|YP_001069658.1| hypothetical protein Mjls_1365 [Mycobacterium sp. JLS] gi|126233767|gb|ABN97167.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=363 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 230/358 (65%), Positives = 260/358 (73%), Gaps = 21/358 (5%) Query 7 IDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGT 66 +DL+D E L+AADR LLRAA+MAGAQVRA AAA DEG L+ LR PR+VIWV GRGT Sbjct 9 VDLDDGEALLAADRDGLLRAAAMAGAQVRATAAALDEGLLESLRSGQLPRTVIWVAGRGT 68 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 AETAG +LA+ GA A PIV + APPW+G LDV++VAGDDP DPALV AAA GVRRGA Sbjct 69 AETAGAVLAAAFGAVVAAPIVTVADAPPWIGALDVIVVAGDDPADPALVSAAATGVRRGA 128 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRIDLASL 186 RVVVVAPYEGPLRD+TAGR L PRL VPD+FGLSRYLAAGLA LQ V P LR+DL L Sbjct 129 RVVVVAPYEGPLRDATAGRAVALAPRLWVPDDFGLSRYLAAGLAVLQVVAPGLRVDLGEL 188 Query 187 ADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRIANQ 246 ADELDAEALRNSA RE+ TNPAKALA R+SG + LAGDNA TLALARHG++V+LR+A + Sbjct 189 ADELDAEALRNSAARELVTNPAKALAERMSGRDVVLAGDNATTLALARHGAAVLLRVAQE 248 Query 247 VVAATRLSDAVVALRAG-------TPPDALFHDEEIDGPAPQRLRVLALALAGERTVVAA 299 VAA L D +VALR+G +LFHDEE+DGP P+R R L ER V A Sbjct 249 TVAAVGLGDVLVALRSGFGAAASGHGGASLFHDEELDGPLPRRARTFVLTTEAERPTVTA 308 Query 300 RVAGLDDAYLVAAEDVPELLDAP-----------VGSGGAVLAVRLEMAAVYLRLVRG 346 RV+G DD LV AEDVP D P + A LAVRLEM AVYLRLVRG Sbjct 309 RVSGYDDLDLVNAEDVP---DGPEPGGAAAGGRGMEQQLAKLAVRLEMTAVYLRLVRG 363 >gi|333991645|ref|YP_004524259.1| hypothetical protein JDM601_3005 [Mycobacterium sp. JDM601] gi|333487613|gb|AEF37005.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=379 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 234/374 (63%), Positives = 273/374 (73%), Gaps = 30/374 (8%) Query 2 NVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDR---PRSV 58 + + +DL+D E L+AADR L AASMAGAQVRA AAA EG LD +RG R R++ Sbjct 7 SFSSTVDLDDAEALLAADRDGALWAASMAGAQVRATAAAVAEGALDTVRGDIRDFPARTL 66 Query 59 IWVTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAA 118 IWV RG A TAG++LA+ G A EP+VLA+ AP W+G LDVL+VAGDDPGDPALV AA Sbjct 67 IWVATRGAAATAGSLLAAARGDSAREPLVLAAEAPAWMGSLDVLVVAGDDPGDPALVAAA 126 Query 119 AIGVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTV--- 175 + GVRRGARVVV APY+GPLRD+TAGRVAVLEPR+ VPDEFGL RYLAAGLA L+ V Sbjct 127 SAGVRRGARVVVAAPYQGPLRDATAGRVAVLEPRVGVPDEFGLPRYLAAGLAVLEAVEPG 186 Query 176 DPKLRIDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARH 235 +P +IDL LADELDAEALRNSAGRE+FTNPAK LA R+ G +ALAGD AA+LALARH Sbjct 187 NPAAQIDLGVLADELDAEALRNSAGRELFTNPAKILADRIVGRDVALAGDCAASLALARH 246 Query 236 GSSVMLRIANQVVAATRLSDAVVALR------AGTPPDALFHDEEIDGPAPQRLRVLALA 289 GS++MLRI VAAT L+DAV ALR AG D +FHDE+IDGPA +RLRVLALA Sbjct 247 GSAMMLRIGRTAVAATGLADAVSALRARAADGAGGSAD-IFHDEQIDGPAAERLRVLALA 305 Query 290 LAGERTVVAARVAGLDDAYLVAAEDVPELLDAPVGSGG-----------------AVLAV 332 L+ ERTVVAAR++GL D L+ A DVP A + G AVLAV Sbjct 306 LSAERTVVAARISGLHDVDLIGAGDVPLTPAAAEETSGPAAVPAPAGPGRAEQQLAVLAV 365 Query 333 RLEMAAVYLRLVRG 346 RLEMAA Y+RL+RG Sbjct 366 RLEMAAAYVRLLRG 379 >gi|108798300|ref|YP_638497.1| hypothetical protein Mmcs_1329 [Mycobacterium sp. MCS] gi|119867396|ref|YP_937348.1| hypothetical protein Mkms_1346 [Mycobacterium sp. KMS] gi|108768719|gb|ABG07441.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119693485|gb|ABL90558.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=363 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 230/358 (65%), Positives = 261/358 (73%), Gaps = 21/358 (5%) Query 7 IDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGT 66 +DL+D E L+AADR LLRAA+MAGAQVRA AAA DEG L+ LR PR+VIWV GRGT Sbjct 9 VDLDDGEALLAADRDGLLRAAAMAGAQVRATAAALDEGLLESLRSGQLPRTVIWVAGRGT 68 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 AETAG +LA+ GA A PIV + APPW+G LDV+++AGDDP DPALV AAA GVRRGA Sbjct 69 AETAGAVLAAAFGAVVAAPIVTVAEAPPWIGALDVIVLAGDDPADPALVAAAATGVRRGA 128 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRIDLASL 186 RVVVVAPYEGPLRD+TAGR VL PRL VPD+FGLSRYLAAGLA LQ V P LR+DL L Sbjct 129 RVVVVAPYEGPLRDATAGRAVVLAPRLWVPDDFGLSRYLAAGLAVLQVVAPGLRVDLGEL 188 Query 187 ADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRIANQ 246 ADELDAEALRNSA RE+ TNPAKALA R+SG + LAGDNA TLALARHG++V+LR+A + Sbjct 189 ADELDAEALRNSAARELVTNPAKALAERMSGRDVVLAGDNATTLALARHGAAVLLRVAQE 248 Query 247 VVAATRLSDAVVALRAG-------TPPDALFHDEEIDGPAPQRLRVLALALAGERTVVAA 299 VAA L D +VALR+G +LFHDEE+DGP P+R R L ER V A Sbjct 249 TVAAVGLGDVLVALRSGFGAAGSGHAGASLFHDEELDGPLPRRARTFVLTTEAERPTVTA 308 Query 300 RVAGLDDAYLVAAEDVPELLDAP-----------VGSGGAVLAVRLEMAAVYLRLVRG 346 RV+G DD LV AEDVP D P + A LAVRLEM AVYLRLVRG Sbjct 309 RVSGYDDLDLVNAEDVP---DGPEPGGAAAGGRGMEQQLAKLAVRLEMTAVYLRLVRG 363 >gi|120402738|ref|YP_952567.1| hypothetical protein Mvan_1738 [Mycobacterium vanbaalenii PYR-1] gi|119955556|gb|ABM12561.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=371 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 207/361 (58%), Positives = 250/361 (70%), Gaps = 21/361 (5%) Query 7 IDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGT 66 +DL+DT+GL+AADR LLRAASMAGAQVRA AAA DEG+LD +R PR+++WV G G Sbjct 11 VDLDDTDGLLAADRQGLLRAASMAGAQVRATAAALDEGDLDAVRSDAPPRTIVWVAGHGN 70 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 AETAG++LA+ LG PIV+ + APPW+G LDV+I+AGDD GD LV AAA VRRGA Sbjct 71 AETAGSMLAALLGGSIGTPIVVVAEAPPWIGTLDVVILAGDDAGDAVLVSAAATAVRRGA 130 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRIDLASL 186 RV+VVAP EGPLRD+TAGR L PR+ VPD F +RYLAAGLA LQ V P +DL +L Sbjct 131 RVIVVAPQEGPLRDATAGRSLALPPRMPVPDHFTFARYLAAGLAVLQAVAPGYSVDLTAL 190 Query 187 ADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRIANQ 246 AD LDAEALRNSA RE+FTNPAK LA R+ + +AGD+AAT+ALARH S VMLR+A + Sbjct 191 ADALDAEALRNSAARELFTNPAKGLADRMQNRDVVVAGDSAATVALARHASVVMLRVAQR 250 Query 247 VVAATRLSDAVVALRAG------TPPDALFHDEEIDGPAPQRLRVLALALAGERTVVAAR 300 VAA L+DA+VAL +G T ++FHDEEIDGP PQR R + L ER+ VAAR Sbjct 251 TVAAAELADALVALGSGWGRGGDTGAASIFHDEEIDGPLPQRTRTIVLTSDAERSAVAAR 310 Query 301 VAGLDDAYLVAAEDVPELL----DAPVGSGGAVLAVRLEM-----------AAVYLRLVR 345 + G DD +V A DVP++ D GS + R E AAVY RLVR Sbjct 311 LQGFDDTQIVTANDVPDVAATGGDGEPGSATTPGSTRPEQQLALLALRLEMAAVYQRLVR 370 Query 346 G 346 G Sbjct 371 G 371 >gi|169630682|ref|YP_001704331.1| hypothetical protein MAB_3602c [Mycobacterium abscessus ATCC 19977] gi|169242649|emb|CAM63677.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=355 Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 176/344 (52%), Positives = 224/344 (66%), Gaps = 7/344 (2%) Query 7 IDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGT 66 IDL+D E L+AAD L+AASMAG+QVRA+ A EG L+ LR DR R+V+WV+GRGT Sbjct 5 IDLDDAEALLAADLDGSLQAASMAGSQVRAVGTAIAEGALEPLRSEDRSRAVVWVSGRGT 64 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 A TAG ILA L + P V A+ AP WVGPLDV+++AGDD GDPAL A +G RRGA Sbjct 65 AATAGAILAGALSDTVSLPFVTATRAPVWVGPLDVMVIAGDDAGDPALSAAVTLGTRRGA 124 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRIDLASL 186 RVV+ AP EGPL DS AGR L PRLRVPD F L+ +LA G A L +D + D+ ++ Sbjct 125 RVVIAAPDEGPLADSGAGRAISLAPRLRVPDTFSLAHHLAVGAAVLGVLDKSVAPDVMTI 184 Query 187 ADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRIANQ 246 ADE+D E RN+ GREVFTN AKA+AAR++ L GD +ATL LA H ++ +LR+ + Sbjct 185 ADEVDGEVSRNTVGREVFTNAAKAIAARLTSGPTVLCGDRSATLTLAGHAAATLLRLTQR 244 Query 247 VVAATRLSDAVVALR-----AGTPPDALFHDEEIDGP-APQRLRVLALALAGERTVVAAR 300 A L+ A+ A+R + +LFHDE IDGP A R+LALA + VAAR Sbjct 245 TATACGLAQALAAMRDALASKSSGESSLFHDEFIDGPRAEAPPRILALATDSDYQSVAAR 304 Query 301 VAGLDDAYLVAAEDVPELLDAPVGSGG-AVLAVRLEMAAVYLRL 343 + GLDDA LV+ D+ + P +L+ RLEMA+VY RL Sbjct 305 IEGLDDAELVSTTDLGPVAARPSELAQLMMLSTRLEMASVYARL 348 >gi|254823003|ref|ZP_05228004.1| hypothetical protein MintA_23949 [Mycobacterium intracellulare ATCC 13950] Length=247 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 172/250 (69%), Positives = 187/250 (75%), Gaps = 30/250 (12%) Query 124 RGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRIDL 183 RGARVVV APYEGPLRD+TAG AVL PRL VPDEFGL RYLAAGLA + VDP+ +D+ Sbjct 1 RGARVVVAAPYEGPLRDATAGHAAVLAPRLGVPDEFGLCRYLAAGLAVVHAVDPRPSVDV 60 Query 184 ASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRI 243 A LADELDAEALRNSA RE+FTNPAK LAAR++ Q+ALAGD AATLALARHGSSV+LRI Sbjct 61 ALLADELDAEALRNSAARELFTNPAKLLAARIADRQIALAGDGAATLALARHGSSVLLRI 120 Query 244 ANQVVAATRLSDAVVALRAGT----------PPDALFHDEEIDGPAPQRLRVLALALAGE 293 ANQV AT L+DAVVALRA P ALFHDEEIDGP P RLRVLA+ LA E Sbjct 121 ANQVTPATGLADAVVALRAAASSGFGGAIADPDAALFHDEEIDGPLPPRLRVLAIILAAE 180 Query 294 RTVVAARVAGLDDAYLVAAEDVPELLDAPVGSGG-----------------AVLAVRLEM 336 +TVVAAR AGLDD YL+AAEDVP D P GS G AVLAVRLEM Sbjct 181 QTVVAARTAGLDDVYLLAAEDVP---DGPGGSAGSGVSPALGGPGRVEQQLAVLAVRLEM 237 Query 337 AAVYLRLVRG 346 AAVY+RLVRG Sbjct 238 AAVYMRLVRG 247 >gi|54026599|ref|YP_120841.1| hypothetical protein nfa46260 [Nocardia farcinica IFM 10152] gi|54018107|dbj|BAD59477.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=419 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 181/379 (48%), Positives = 225/379 (60%), Gaps = 41/379 (10%) Query 7 IDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSD-RPRSVIWVTGRG 65 +DL+D L AAD G LR+A+ GAQVRA AAA GE L R +D RPRSV++V+G G Sbjct 12 LDLDDAASLEAADSGGALRSAASGGAQVRATAAAV--GENALARLADLRPRSVVFVSGSG 69 Query 66 TAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRG 125 A A +L LG A P+V A+ PPWVGPLDV++VAGDD GDP L+ A +RRG Sbjct 70 RAARAAGLLMMALGDRAGLPVVHAAGLPPWVGPLDVVLVAGDDAGDPRLIDAVDRALRRG 129 Query 126 ARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR----I 181 A VVV AP EGPLR + AGR A+LEPR+ V D L R+LAAG+A L+ VDP Sbjct 130 AEVVVAAPNEGPLRMAAAGRAALLEPRVPVLDHNRLLRFLAAGIAVLRMVDPARSGAAVP 189 Query 182 DLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVML 241 +L +LAD LDAEALR++ EVF NPAK LAAR+ L L GD+ A LA H + V+L Sbjct 190 ELTALADMLDAEALRDAPQNEVFHNPAKTLAARMQQRGLVLVGDSPAAAELADHAAEVLL 249 Query 242 RIANQVVAATRLSDAVVALRAGTPP--------DALFHDEEIDGPAP-QRLRVLALALAG 292 + A +V ++ L++AV A T D LFHDEE+DGPAP R+RV L+ Sbjct 250 QAAGRVASSADLAEAVAAGPQLTAAAGEQAPDFDPLFHDEELDGPAPVDRIRVFVLSTDP 309 Query 293 ERTVVAARVA-----GLDDAYLVAAE---------DVPELLDAP-----VGSGG------ 327 ++T R+A GL DA LV A+ D L P G G Sbjct 310 DQTAARRRLAVFGTGGLVDADLVTADIDLLRSALTDPAALTPQPEDRTATGDHGTELEQL 369 Query 328 AVLAVRLEMAAVYLRLVRG 346 AVLA+RLEMAA YLRL+ G Sbjct 370 AVLALRLEMAAAYLRLIGG 388 >gi|325675685|ref|ZP_08155369.1| hypothetical protein HMPREF0724_13151 [Rhodococcus equi ATCC 33707] gi|325553656|gb|EGD23334.1| hypothetical protein HMPREF0724_13151 [Rhodococcus equi ATCC 33707] Length=371 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 166/347 (48%), Positives = 211/347 (61%), Gaps = 25/347 (7%) Query 24 LRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAETAGTILASTLGAGAA 83 LR A++ GAQ+RA AAA E L L G RPRSV+ V+G G+A A + + +G+ Sbjct 25 LRFAALGGAQIRATAAAVHENALARLHGM-RPRSVVLVSGEGSASRAAELTQAAVGSRIG 83 Query 84 EPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARVVVVAPYEGPLRDSTA 143 P++ A PPWVGPLDV++VAGDD GDP LV + +RRGA VVVVAP EGP+R + A Sbjct 84 VPVLGAIGTPPWVGPLDVVVVAGDDAGDPRLVESVDSALRRGAEVVVVAPDEGPMRAAGA 143 Query 144 GRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVD----PKLRIDLASLADELDAEALRNSA 199 GR +L PR+ VP + GL RYLAA LA L VD K+ DL LAD +DAEA+R+ Sbjct 144 GRALLLPPRVAVPGQHGLLRYLAAFLAVLVAVDAERTAKIVPDLDRLADVVDAEAVRDHP 203 Query 200 GREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRIANQVVAATRLSDAVVA 259 EVF NPAK+LAAR+ G ++ L GD+ T +ARHGS +LR+ V AAT L DAV Sbjct 204 SNEVFHNPAKSLAARMQGRRVVLTGDSRTTALVARHGSEALLRVGADVAAATDLPDAVSG 263 Query 260 LR---AGTPP--DALFHDEEIDGPAPQRLRVLALALAGE-RTVVAARVAGLDDAYLVAA- 312 +R +GT D FHDEE+DGPAP + + E R +V RVA L DA +V A Sbjct 264 VRRFPSGTAAGYDPFFHDEELDGPAPAAAVRVVVLALEENRALVERRVAALPDADVVVAD 323 Query 313 --EDVPELLDAPV---GSGG--------AVLAVRLEMAAVYLRLVRG 346 E P+L + G GG A+L RLEM+A YLRL+ G Sbjct 324 GSESAPDLAGSASRSPGPGGTRTDLEQLAILVGRLEMSAAYLRLIGG 370 >gi|111023280|ref|YP_706252.1| hypothetical protein RHA1_ro06317 [Rhodococcus jostii RHA1] gi|110822810|gb|ABG98094.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=359 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 157/355 (45%), Positives = 209/355 (59%), Gaps = 19/355 (5%) Query 7 IDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGT 66 DL+D + L+AAD +LR+A+M GAQ+RA +A +EG L+ L+G RPRSV+ VTG G Sbjct 8 FDLDDGDALVAADTEGVLRSAAMGGAQIRATRSAVEEGALERLQGL-RPRSVVVVTGAGR 66 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 A IL + L P+V A+ P WVGPLDV++VAGDD GDP LV A VRRGA Sbjct 67 ASRGAAILTAVLAERIGFPLVRATRTPVWVGPLDVVVVAGDDAGDPRLVQAIDAAVRRGA 126 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR----ID 182 VVV AP EGPL+ + AGRV + PR+R GL RY A LA L+ V + D Sbjct 127 EVVVAAPDEGPLQAAAAGRVVMFAPRVRALTRHGLLRYFAVLLAVLRVVGSERWGDEVPD 186 Query 183 LASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLR 242 L +AD +D EALR+ EVF NPAK+LA+R+ G ++ L GD +T+ LARHG+ +L Sbjct 187 LEQIADAVDGEALRDRPNSEVFHNPAKSLASRMQGRRIVLTGDTESTVELARHGAEALLH 246 Query 243 IANQVVAATRLSDAVVAL------RAGTPPDALFHDEEIDG-PAPQRLRVLALALAGERT 295 A +V A+ L D + A +A + D++FHD E+DG P+ +R L+ +R Sbjct 247 -AGRVATASELPDVLSAAGTFRVDQALSAHDSIFHDPELDGPPSASPVRTFVLSADADRM 305 Query 296 VVAARVAGLDDAYLVAAE----DVPELLDAPVGSGGAVLAVRLEMAAVYLRLVRG 346 +V R+A L D LV A VP P AVL RL+M A YL+L+ G Sbjct 306 LVERRIAALGDVDLVVASSDEGQVPS--QRPELEQAAVLVGRLDMTAAYLQLIGG 358 >gi|312140685|ref|YP_004008021.1| hypothetical protein REQ_33460 [Rhodococcus equi 103S] gi|311890024|emb|CBH49342.1| hypothetical protein REQ_33460 [Rhodococcus equi 103S] Length=374 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 165/347 (48%), Positives = 211/347 (61%), Gaps = 25/347 (7%) Query 24 LRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAETAGTILASTLGAGAA 83 LR A++ GAQ+RA AAA E L L G +PRSV+ V+G G+A A + + +G+ Sbjct 28 LRFAALGGAQIRATAAAVHENALARLHGM-QPRSVVLVSGEGSASRAAELTQAAVGSRIG 86 Query 84 EPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARVVVVAPYEGPLRDSTA 143 P++ A PPWVGPLDV++VAGDD GDP LV + +RRGA VVVVAP EGP+R + A Sbjct 87 VPVLGAVGTPPWVGPLDVVVVAGDDAGDPRLVESVDSALRRGAEVVVVAPDEGPMRAAGA 146 Query 144 GRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVD----PKLRIDLASLADELDAEALRNSA 199 GR +L PR+ VP + GL RYLAA LA L VD K+ DL LAD +DAEA+R+ Sbjct 147 GRALLLPPRVAVPGQHGLLRYLAAFLAVLVAVDAERTAKIVPDLDRLADVVDAEAVRDHP 206 Query 200 GREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRIANQVVAATRLSDAVVA 259 EVF NPAK+LAAR+ G ++ L GD+ T +ARHGS +LR+ V AAT L DAV Sbjct 207 SNEVFHNPAKSLAARMQGRRVVLTGDSRTTALVARHGSEALLRVGADVAAATDLPDAVSG 266 Query 260 LR---AGTPP--DALFHDEEIDGPAPQRLRVLALALAGE-RTVVAARVAGLDDAYLVAA- 312 +R +GT D FHDEE+DGPAP + + E R +V RVA L DA +V A Sbjct 267 VRRFPSGTAAGYDPFFHDEELDGPAPAAAVRVVVLALEENRALVERRVAALPDADVVVAD 326 Query 313 --EDVPELLDAPV---GSGG--------AVLAVRLEMAAVYLRLVRG 346 E P+L + G GG A+L RLEM+A YLRL+ G Sbjct 327 GSESAPDLAGSASRSPGPGGTRTDLEQLAILVGRLEMSAAYLRLIGG 373 >gi|226365788|ref|YP_002783571.1| hypothetical protein ROP_63790 [Rhodococcus opacus B4] gi|226244278|dbj|BAH54626.1| hypothetical protein [Rhodococcus opacus B4] Length=359 Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 158/352 (45%), Positives = 204/352 (58%), Gaps = 31/352 (8%) Query 16 IAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAETAGTILA 75 ++AD +LR+A+M GAQ+RA +A +EG L+ L+G RPRSV+ VTG G A IL Sbjct 17 VSADTEGVLRSAAMGGAQIRATRSAVEEGALERLQGL-RPRSVVVVTGAGRASRGAGILT 75 Query 76 STLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARVVVVAPYE 135 + L P+V A+ P WVGPLDV++VAGDD GDP LV A VRRGA VVV AP E Sbjct 76 AVLAERIGFPLVRAARTPVWVGPLDVVVVAGDDAGDPRLVQAVDAAVRRGAEVVVAAPDE 135 Query 136 GPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLR----IDLASLADELD 191 GPL+ + AGRV + PR+R GL RY A LA L+ V + DL LAD +D Sbjct 136 GPLQAAAAGRVVMFAPRVRALTRHGLLRYFAVLLAVLRVVGSERWGDEVPDLEQLADAVD 195 Query 192 AEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRIANQVVAAT 251 EALR+ EVF NPAK+LA+R+ G ++ L GD +T+ LARHG+ +L A +V A+ Sbjct 196 GEALRDRPNSEVFHNPAKSLASRMQGRRIVLTGDTESTVELARHGAEALLH-AGRVATAS 254 Query 252 RLSDAVVALRAGT--------PPDALFHDEEIDGPAPQR-LRVLALALAGERTVVAARVA 302 L D + A AGT DA+FHD E+DGP P +R L+ +R +V R+A Sbjct 255 ELPDVLSA--AGTFRVDPALSAHDAIFHDPELDGPPPASPVRTFVLSADADRMLVERRIA 312 Query 303 GLDDAYLVAA--------EDVPELLDAPVGSGGAVLAVRLEMAAVYLRLVRG 346 L D LV A PEL A AVL RL+M A YL+L+ G Sbjct 313 VLGDVDLVVASSDEGQVSSQRPELEQA------AVLVGRLDMTAAYLQLIGG 358 >gi|333921458|ref|YP_004495039.1| hypothetical protein AS9A_3801 [Amycolicicoccus subflavus DQS3-9A1] gi|333483679|gb|AEF42239.1| hypothetical protein AS9A_3801 [Amycolicicoccus subflavus DQS3-9A1] Length=389 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 157/377 (42%), Positives = 211/377 (56%), Gaps = 40/377 (10%) Query 7 IDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGT 66 + L+D +GL+AADR LLR+A+++GAQVRA A AADEG L L + RPRS++ V RG+ Sbjct 11 VGLDDADGLLAADREGLLRSAALSGAQVRAAAVAADEGALAAL-STARPRSLVLVARRGS 69 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 A +A + + A P+V A AP WVGPLDV+I+AGDD GDP LV + VR G Sbjct 70 ALSAVETVCAAFSRQFAMPVVAADHAPTWVGPLDVVILAGDDAGDPVLVESVDRAVRHGC 129 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKL----RID 182 VVVVAP GPL+ + +GR L PR+ VPD F ++ Y+AA L ++ L ++D Sbjct 130 EVVVVAPDGGPLQAAGSGRAITLPPRVIVPDPFAMAGYIAAIATVLTAMEGALHDGVQMD 189 Query 183 LASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLR 242 L + AD LD EAL N RE + NPAK+L +V+ ++ +A D+AA+ A+A H S + +R Sbjct 190 LMACADALDHEALLNHPQRETYENPAKSLVEKVTNHRVVIAADSAASRAVASHASEIFVR 249 Query 243 IANQVVA----ATRLSDAVVALRAGTPP--DALFHDEEIDGPAP-QRLRVLALALAGERT 295 I + A LS V PP D LFHD ++DGP P LRVL LA + +R Sbjct 250 IGGHLAPDADLAGVLSGLPVLASVSVPPGFDPLFHDPQLDGPPPIAPLRVLLLATSRDRA 309 Query 296 VVAARVAGL-DDAYLVAAED-----VPELLDAPV----GSGG------------------ 327 R A L +A LV E +P + V GS Sbjct 310 EAERRSALLRGNAVLVVPEHTADGKLPGVEHQQVLPRDGSRAFSAEGQSDRGKMKELCEL 369 Query 328 AVLAVRLEMAAVYLRLV 344 VLA RLEMAAVY+++V Sbjct 370 MVLASRLEMAAVYVQMV 386 >gi|229489392|ref|ZP_04383255.1| TobH protein [Rhodococcus erythropolis SK121] gi|229323489|gb|EEN89247.1| TobH protein [Rhodococcus erythropolis SK121] Length=364 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 146/358 (41%), Positives = 195/358 (55%), Gaps = 21/358 (5%) Query 7 IDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGT 66 +DL+D+EGL AAD LLR+ +M GAQ+RA A+A EG + L G RPRSV+ + G G Sbjct 8 LDLDDSEGLSAADSEGLLRSVAMGGAQIRATASAVGEGVISRLAGL-RPRSVVLIAGAGG 66 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 A I + +G P+++ P W GPLDV++VAGDD GDP LV + VRRGA Sbjct 67 ARHGARIALALVGDSVGCPLLVLDRTPSWAGPLDVIVVAGDDAGDPRLVESVDSAVRRGA 126 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRID---- 182 VVV P EGP+R AGR L PRL ++R+LA LA ++ K I+ Sbjct 127 EVVVAVPDEGPMRAVAAGRTMPLPPRLYASPRHTMTRFLAVFLAVAAEIEGKGSIEDRSA 186 Query 183 -LASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVML 241 L +AD +DAEALR+ EVF NPAK+LA R+SG ++ L G + T ALA SSV L Sbjct 187 VLGRIADAVDAEALRDGPANEVFHNPAKSLATRMSGRRVVLCGSGSVTTALAEF-SSVAL 245 Query 242 RIANQVVAATRLSDAVVALRAGTPPDA----------LFHDEEIDGPAPQ-RLRVLALAL 290 + AA +S+ + + RA PDA FHD ++DG P R A Sbjct 246 MSSGLNAAAAEMSEVIRSARALFAPDAASRDSVFHDPFFHDPQLDGALPTPPARAFVFAT 305 Query 291 AGERTVVAARVAGLDDAYLVAA--EDVPELLDAPVGSGGAVLAVRLEMAAVYLRLVRG 346 R R+ L DA LV A ED ++ + + VLA R++MAA Y++L G Sbjct 306 ESTRGEARRRMDALADADLVVAADEDQTNVVISEM-EQVFVLASRVDMAATYVQLTGG 362 >gi|226305645|ref|YP_002765605.1| hypothetical protein RER_21580 [Rhodococcus erythropolis PR4] gi|226184762|dbj|BAH32866.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=364 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 144/358 (41%), Positives = 194/358 (55%), Gaps = 21/358 (5%) Query 7 IDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGT 66 +DL+D+EGL AAD LLR+ +M GAQ+RA A+A E + L G RPRSV+ + G G Sbjct 8 LDLDDSEGLSAADSEGLLRSVAMGGAQIRATASAVGESVISRLAGL-RPRSVVLIAGAGG 66 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 A + + +G P+++ P W GPLDV++VAGDD GDP LV + VRRGA Sbjct 67 ARHGARMALALVGDSIGCPLLVLDRTPSWAGPLDVIVVAGDDAGDPRLVESVDSAVRRGA 126 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRID---- 182 VVV P EGP+R AGR L PRL ++R+LA LA ++ K I+ Sbjct 127 EVVVAVPDEGPMRAVAAGRTMSLPPRLYASPRHTMTRFLAVFLAVAAEIEGKGSIEDRSA 186 Query 183 -LASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVML 241 L +AD +DAEALR+ EVF NPAK+LA R+SG ++ L G + T ALA SSV L Sbjct 187 VLGRIADAVDAEALRDGPANEVFHNPAKSLATRMSGRRVVLCGSGSVTTALAEF-SSVSL 245 Query 242 RIANQVVAATRLSDAVVALRAGTPPDA----------LFHDEEIDGPAPQ-RLRVLALAL 290 + AA +S+ + + RA PDA FHD ++DG P R A Sbjct 246 MSSGLNAAAAEMSEVIRSARALFAPDAASRDSVFHDPFFHDPQLDGALPTPPARAFVFAT 305 Query 291 AGERTVVAARVAGLDDAYLVAA--EDVPELLDAPVGSGGAVLAVRLEMAAVYLRLVRG 346 R R+ L DA LV A ED ++ + + VLA R++MAA Y++L G Sbjct 306 ESTRGEARRRMDALADADLVVAADEDQTNVVISEM-EQVFVLASRVDMAAAYVQLTGG 362 >gi|326381472|ref|ZP_08203166.1| hypothetical protein SCNU_00935 [Gordonia neofelifaecis NRRL B-59395] gi|326199719|gb|EGD56899.1| hypothetical protein SCNU_00935 [Gordonia neofelifaecis NRRL B-59395] Length=375 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 154/369 (42%), Positives = 203/369 (56%), Gaps = 36/369 (9%) Query 8 DLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTG-RGT 66 DL+D +GL+AADR LL++A+M GAQVRA++ A EG L+ L RPR+V+ VTG T Sbjct 7 DLDDVDGLLAADRDGLLQSAAMTGAQVRAVSQAQSEGALERL-ADLRPRAVVVVTGASAT 65 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 A A ++A+ + PI+ A A P W+GPLDV+ VAGDD GDPAL AA +RR A Sbjct 66 ARRAADLVAAVVAPRIDVPIITAPALPGWIGPLDVVAVAGDDAGDPALADAAMRTLRRRA 125 Query 127 RVVVVAPYEGPLRDSTAGRVAV-LEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRI---- 181 +V VAP EGPLRD+ + V L PRLRV D FG SR++AA L A+ T +R+ Sbjct 126 ELVAVAPVEGPLRDAIGSQPMVDLSPRLRVDDRFGFSRFVAA-LLAVCTALTAVRLTPAA 184 Query 182 -DLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 DLA LAD LD EA + G+E F N AK LA R++ +A AGD +A H S++ Sbjct 185 PDLAELADRLDGEAAADHPGQESFHNQAKLLALRLADRPVAWAGDTPGAAVIAAHASAIA 244 Query 241 LRIANQVVAATRLSDAVVALR------AGTPPDALFHDEEIDGPAPQRLRVLALALAGER 294 +A V AT ++ V+ALR P D +F+D EID P R + A R Sbjct 245 FAVAGTVSTAT--AEPVLALRLREGAAGAAPVDDIFYDPEIDPPRAASTRGILFTTAARR 302 Query 295 TVVAARVAGLDDAYLVA----------AEDVP--------ELLDAPVGSGGA-VLAVRLE 335 R A L D +VA E P + P G VLA+R E Sbjct 303 WYAERRSAALGDIDIVAEQPADGADGSGEPAPAAAMSAGDPFTETPADLGEYLVLALRAE 362 Query 336 MAAVYLRLV 344 +AAV++RL+ Sbjct 363 LAAVFVRLM 371 >gi|296138915|ref|YP_003646158.1| hypothetical protein Tpau_1188 [Tsukamurella paurometabola DSM 20162] gi|296027049|gb|ADG77819.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=366 Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 158/364 (44%), Positives = 202/364 (56%), Gaps = 35/364 (9%) Query 8 DLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTA 67 DL+D GLIAAD G LR+A++ GAQVRA+A+ D+G L L G PR+V+ V G G A Sbjct 6 DLDDPAGLIAADVGGHLRSAALGGAQVRAVASLVDDGALAPLDGF-APRAVVVVCGAGPA 64 Query 68 ETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGAR 127 A + + P+V ++ PPWVG LDV+IV G D GD L A A+ RRGA Sbjct 65 AAAAGFVEALTAGRLDVPLVRSTELPPWVGALDVVIVCGFDAGDLVLARAIAVAARRGAT 124 Query 128 VVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAAL-------QTVDPKLR 180 VVV P EGP+ ++ AGR L PRLRVP+ FG AA LA + + +P R Sbjct 125 VVVAVPMEGPVAEAAAGRAIDLSPRLRVPERFGFVGVAAALLAVIGRLSGTDKDAEPG-R 183 Query 181 IDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM 240 L +LAD LD EALR R + TNPAK LAAR++G ++AL D+AA LA+A H +S Sbjct 184 GYLFTLADALDEEALRGHPDRGLETNPAKQLAARLAGRRVALTADSAAGLAIAEHAASQA 243 Query 241 LRIANQVVAATRLSDAVV------------ALRAGTPPDALFHDEEIDGPAPQ-RLRVLA 287 L + QVVAA L+D + AL A T D LFHD +DGPA Q LRVL Sbjct 244 LTLGGQVVAAVGLADVELATPELAAAPSGGALGAST-VDPLFHDPFLDGPAAQVPLRVLI 302 Query 288 LALAGERTVVAARVAGLDDAYLV--------AAEDVPELLDAPVGSGGAVLAVRLEMAAV 339 L + VAAR+ L D + A E P + + S LAVR ++A+V Sbjct 303 LTVRDRAAQVAARMRALPDVESLPIDEDGAEAGERSPRVEATDLLS----LAVRFDLASV 358 Query 340 YLRL 343 Y RL Sbjct 359 YRRL 362 >gi|296393060|ref|YP_003657944.1| hypothetical protein Srot_0631 [Segniliparus rotundus DSM 44985] gi|296180207|gb|ADG97113.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=357 Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 126/312 (41%), Positives = 170/312 (55%), Gaps = 23/312 (7%) Query 52 SDRPRSVIWVTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGD 111 S +PR+++ V G A + A G P+V ++ P W GPLDVL+V G DPGD Sbjct 45 SIQPRALLSVAGSAEAAHGADVFALVAGDEWDVPVVRSARLPSWAGPLDVLLVVGSDPGD 104 Query 112 PALVGAAAIGVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLA- 170 P LV A + +RRG VV AP EGPL+ + +GR L PRL D FG + LAA +A Sbjct 105 PLLVEAVSTALRRGVTTVVSAPLEGPLQAAASGRALDLAPRLAGGDSFGFVQSLAAHIAV 164 Query 171 --ALQTVDPKLRIDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAA 228 A+++ +D+A+LAD++D E R VF NPA+ALA R+ G ++ LAGD A Sbjct 165 ARAVRSARGASLVDVAALADQIDQEIFSAHPSRPVFENPARALAERMRGRRVVLAGDGPA 224 Query 229 TLALARHGSSVMLRIANQVVAATRLSDAVVALRAG--------TPPDALFHDEEIDGPAP 280 +A+AR+G+ +LR+A + AT D V L AG + ALFHD E DGP P Sbjct 225 AVAVARYGADALLRVAGEPAQAT---DLVTTLFAGERLGVGGLSADAALFHDPEFDGPLP 281 Query 281 QRLRVLALALAGERTVVAARVAGLDDAYLVAAEDV---PELLDAPVGSGG------AVLA 331 RV AL+ R V A++ L DA V + + PE+ P AVLA Sbjct 282 AAPRVFALSAERGRWEVEAQIRRLPDAESVVVDPIQPEPEIRRFPRQEEFADLPQLAVLA 341 Query 332 VRLEMAAVYLRL 343 RL +A+VYLRL Sbjct 342 QRLALASVYLRL 353 >gi|254821372|ref|ZP_05226373.1| hypothetical protein MintA_15652 [Mycobacterium intracellulare ATCC 13950] Length=120 Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 89/119 (75%), Positives = 99/119 (84%), Gaps = 0/119 (0%) Query 1 VNVARAIDLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIW 60 +N +AIDLEDT+GL+ ADR LLRAAS AGAQVRAIA A +EG LD LR DRPRSVIW Sbjct 1 MNATQAIDLEDTDGLLTADRDGLLRAASSAGAQVRAIATAVEEGALDPLRAEDRPRSVIW 60 Query 61 VTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAA 119 V+GRGTAETAG ILA+TL + A++P LA APPWVGPLDVLIVAGDDPGDPALV AAA Sbjct 61 VSGRGTAETAGAILAATLNSVASQPFTLAGEAPPWVGPLDVLIVAGDDPGDPALVAAAA 119 >gi|262203187|ref|YP_003274395.1| hypothetical protein Gbro_3298 [Gordonia bronchialis DSM 43247] gi|262086534|gb|ACY22502.1| hypothetical protein Gbro_3298 [Gordonia bronchialis DSM 43247] Length=378 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 153/373 (42%), Positives = 190/373 (51%), Gaps = 41/373 (10%) Query 8 DLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWV-TGRGT 66 DL+D E L++AD LLR ++AGAQVR+IA AA EG L L+ RPRSV+ V +G G Sbjct 7 DLDDAEQLLSADVEGLLRGVALAGAQVRSIAEAAREGVLAPLQDL-RPRSVVIVYSGGGV 65 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 A A ++ +T+ A P+V A P W+GPLDV+IVAGDD GD AL AAA RR A Sbjct 66 AARAAALIVATVSARIDVPVVTVPALPGWIGPLDVVIVAGDDAGDMALSDAAARATRRRA 125 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRID---- 182 VVV AP GPLRD+ G L PR+ V ++AA LA + +R Sbjct 126 EVVVAAPIAGPLRDALGGNGIDLSPRVDVEPRLRFVGFVAAILAVFTALS-GVRFGGVPP 184 Query 183 -LASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVML 241 L +AD LD EA RE F N AK LA RV GD A + LA H SS L Sbjct 185 VLDEIADALDEEASSGHPDRESFHNRAKMLALRVQDRPTVWTGDTPAGVVLAGHASSTFL 244 Query 242 RIANQVVAATRLSDAVVALR-------AGTPPDALFHDEEIDGPAPQ-RLRVLALALAGE 293 +A V AA L+DA G+ D++F+D EIDGPA Q R + + A Sbjct 245 SLAGIVCAAADLADAARMAAVVAARTPGGSAADSIFYDPEIDGPAAQAPPRSMVITTATR 304 Query 294 RTVVAARVAGLDDAYLV---------------------AAEDVPELLDAPVGSGGAVLAV 332 RVAGL D LV A EDV D+P ++ V Sbjct 305 EWYTRQRVAGLGDVDLVIGADADSPAAPADREGPARPMAGEDV---ADSPGDLPAHLVTV 361 Query 333 -RLEMAAVYLRLV 344 R+E+AAVYLRLV Sbjct 362 LRVELAAVYLRLV 374 >gi|343926914|ref|ZP_08766407.1| hypothetical protein GOALK_072_01360 [Gordonia alkanivorans NBRC 16433] gi|343763274|dbj|GAA13333.1| hypothetical protein GOALK_072_01360 [Gordonia alkanivorans NBRC 16433] Length=382 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 150/373 (41%), Positives = 190/373 (51%), Gaps = 38/373 (10%) Query 8 DLEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRG-T 66 DL+D E L +AD LLRA ++AGAQVRA A A EG L L RPRSV+ V G Sbjct 7 DLDDAEELFSADVDGLLRAVALAGAQVRATAEAVREGVLAPL-ADLRPRSVVIVHGSSEV 65 Query 67 AETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGA 126 + A + +TL A P+V P WVGPLDV+IVAG+D GD AL AAA +RR A Sbjct 66 SHRAAELGVATLAARVDVPVVTGPVLPGWVGPLDVVIVAGEDAGDMALADAAARALRRRA 125 Query 127 RVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRID---- 182 VVV AP GPL+D+ G L PR V F ++AA LA + ++R+ Sbjct 126 EVVVAAPIAGPLQDALGGNGIDLSPRFDVEPRFRFVGFVAALLAVFGGLT-QVRVTGPVP 184 Query 183 -LASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVML 241 L LAD LDAEA + RE F N AK+LA RV G D+ A LA H S +L Sbjct 185 ALDDLADALDAEASGSHPSRETFHNRAKSLAVRVQGRPSVWTSDSPAGSVLAVHAVSSIL 244 Query 242 RIANQVVAATRLSDA--VVALRAGTP-----PDALFHDEEIDGPAPQRL-RVLALALAGE 293 A V A L D + LR P D++F+D E DGPA + R++ ++ A Sbjct 245 AFAGIVGAVAELGDVARMSRLRESRPGAAPAADSIFYDPEFDGPAQEPAPRIMIMSTARR 304 Query 294 RTVVAARVAGLDDAYLVA----AEDVPEL------------LDAPVGSGGA------VLA 331 RV GL D LV AE VP+ + PV G V+A Sbjct 305 EWYTRQRVMGLGDVDLVVGADEAEAVPQTGGQPSDGRRPVPGEDPVADGPGDLLDFLVVA 364 Query 332 VRLEMAAVYLRLV 344 +R+EM+AVYLRL+ Sbjct 365 LRVEMSAVYLRLI 377 >gi|257057070|ref|YP_003134902.1| hypothetical protein Svir_31000 [Saccharomonospora viridis DSM 43017] gi|256586942|gb|ACU98075.1| hypothetical protein Svir_31000 [Saccharomonospora viridis DSM 43017] Length=362 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/220 (46%), Positives = 127/220 (58%), Gaps = 4/220 (1%) Query 9 LEDTEGLIAADRGALLRAASMAGAQVRA-IAAAADEGELDLLRGSDRPRSVIWVTGRGTA 67 L+D L AD LLRAA+MAGAQVRA + AA+ G D L RPRS++ +T G Sbjct 8 LDDPTRLAEADGEDLLRAAAMAGAQVRATVETAAELGLADRL-DMGRPRSLVLLTRPGVG 66 Query 68 ETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGAR 127 TA ++L S + A ++ P+V + P WVG LDV+ V DDP D L + R GA Sbjct 67 RTAASLLKSLVMASSSAPVVTSDVVPSWVGALDVVFVHTDDPYDTELALSLERAARYGAG 126 Query 128 VVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRIDLASLA 187 VV+ AP EGP+ S AGR VL PR+ VP E L R LAAGL T+ + D+ LA Sbjct 127 VVLSAPSEGPVASSVAGRGLVLAPRVPVPAELALPRALAAGLLTANTLGLSV-ADVEGLA 185 Query 188 DELDAEALRNSAGREVFTNPAKALAARVSGCQLALAG-DN 226 D LD EA R G+E F NPAK+LA R++ L G DN Sbjct 186 DRLDHEAERCHPGQESFVNPAKSLALRLAEHTPLLWGLDN 225 >gi|331698950|ref|YP_004335189.1| hypothetical protein Psed_5199 [Pseudonocardia dioxanivorans CB1190] gi|326953639|gb|AEA27336.1| hypothetical protein Psed_5199 [Pseudonocardia dioxanivorans CB1190] Length=368 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 89/199 (45%), Positives = 116/199 (59%), Gaps = 4/199 (2%) Query 21 GALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAETAGTILASTLGA 80 G +LRAA+ AGAQVR+ A + DE + L G RPR ++ V G + TA ++A+ LG Sbjct 25 GGVLRAAATAGAQVRSAALSTDEAGVPDLSGH-RPRGLVLVRRPGVSATAMPLVAAVLGP 83 Query 81 GAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARVVVVAPYEGPLRD 140 P+VLA P W GPLDV++V DD D L A VRRG+ VV+ AP +GP+ Sbjct 84 ACPVPVVLADTVPLWTGPLDVVVVHTDDANDAELADAVGSAVRRGSDVVLSAPGDGPVAA 143 Query 141 STAGRVAVLEPRLRVPDEFGLSRYLAAGL---AALQTVDPKLRIDLASLADELDAEALRN 197 + AGRV ++EPR+ VP L R A GL L + + L +LAD LD EA RN Sbjct 144 AGAGRVRLVEPRIPVPPALDLPRAYAVGLVVAGTLGLLGAGFDVRLDALADALDGEAERN 203 Query 198 SAGREVFTNPAKALAARVS 216 G E F NPAKALA R++ Sbjct 204 QPGHEPFMNPAKALALRLA 222 >gi|317506114|ref|ZP_07963939.1| zinc finger protein [Segniliparus rugosus ATCC BAA-974] gi|316255613|gb|EFV14858.1| zinc finger protein [Segniliparus rugosus ATCC BAA-974] Length=233 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 97/223 (44%), Positives = 125/223 (57%), Gaps = 6/223 (2%) Query 17 AADRGA--LLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAETAGTIL 74 AA+R A L A+ GAQ RAI +A+ G L L S RPR++I VTG G + Sbjct 12 AAERAAMVLFEVAAHGGAQARAIGSASASGALAELE-SLRPRALISVTGSGDVAHGADVF 70 Query 75 ASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARVVVVAPY 134 A+ GA P+V + P W GPLDVL+VAG D GDP LV A + RRG V AP Sbjct 71 AAIAGADWDIPVVRSPRLPSWAGPLDVLLVAGADSGDPLLVEAVSTASRRGVATVASAPL 130 Query 135 EGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPK---LRIDLASLADELD 191 EGPLR + RV L PRL D FG + LAA +A + V +DL +LAD++D Sbjct 131 EGPLRAAADSRVIDLAPRLAGGDSFGFVQSLAAHVAVARAVRSSRGGSLVDLLALADQID 190 Query 192 AEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALAR 234 E R +F NPA+ALA R+ G ++ LAGD +A ++AR Sbjct 191 EEIFLAHPSRPIFENPARALAERMRGRRVVLAGDGSAAASVAR 233 >gi|256380313|ref|YP_003103973.1| hypothetical protein Amir_6325 [Actinosynnema mirum DSM 43827] gi|255924616|gb|ACU40127.1| hypothetical protein Amir_6325 [Actinosynnema mirum DSM 43827] Length=358 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 134/349 (39%), Positives = 187/349 (54%), Gaps = 20/349 (5%) Query 9 LEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAE 68 L+D L AD LLRAA+ AGAQVRA A AA E +D + +RPR+++ +T G Sbjct 7 LDDQRRLADADTDDLLRAAARAGAQVRATAEAAAELGVDRVM-RERPRALVLITRPGVGP 65 Query 69 TAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARV 128 ++ + LG P+V++ AP WVG LDV++ +DPGD L + + RRGARV Sbjct 66 AVANLVTALLGPRCPVPVVVSDEAPGWVGALDVVLAHTEDPGDHVLAESVDLAGRRGARV 125 Query 129 VVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRIDLASLAD 188 ++ A +GP+ S A ++ PR+ VP FG R AA +AL + L +DL +AD Sbjct 126 LLTAEPDGPVAASAARHALLVPPRVPVPQGFGFVRAFAAWSSALSALG-LLEVDLTQVAD 184 Query 189 ELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRIANQV- 247 ELD EA R+ E F NPAK+LA RV+ L G + A+A HG+ V+ R A V Sbjct 185 ELDREAERDHPVHESFVNPAKSLALRVAERTPLLWGLDDMATAVAGHGAGVLARHAGLVC 244 Query 248 -VAATRLSDAVVALR----AGTPPDALFHDEEIDGPAPQRLRVLALALAGERTVVAARVA 302 VA R + AL GT +F D + D P Q +RVL LA+ + A++A Sbjct 245 DVAPHRQAITRTALHRRAVQGTSGADIFADPD-DEPGGQ-VRVLLLAVRRGQQAEQAKLA 302 Query 303 GLDDAYLVAAEDVPELLDAPVGSGG-----AVLAVRLEMAAVYLRLVRG 346 + +A DV E A SGG A+LA+R E+A++YL L G Sbjct 303 AVRS---LAGADVLE--PAEEVSGGDAVCSALLALRFELASLYLGLAAG 346 >gi|302530041|ref|ZP_07282383.1| predicted protein [Streptomyces sp. AA4] gi|302438936|gb|EFL10752.1| predicted protein [Streptomyces sp. AA4] Length=361 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 132/347 (39%), Positives = 177/347 (52%), Gaps = 14/347 (4%) Query 9 LEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAE 68 L+D+ L ADR LLRAA+MAGAQVRA A AA E EL RPRS++ + G + Sbjct 7 LDDSARLADADRAGLLRAAAMAGAQVRATAEAAAELELSERLDVGRPRSLVLLDRPGVSR 66 Query 69 TAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARV 128 T +LA+ L P+V+A + P W+G LDV+ DD GD L + R GA V Sbjct 67 TLTRLLAALLAPSCPVPVVVAESVPAWIGALDVVFAHTDDAGDRELAASLERAARFGASV 126 Query 129 VVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRIDLASLAD 188 V+ AP EGP+ S AG+ +L PR+ VP E R LAAGL + L D+ +LAD Sbjct 127 VLSAPAEGPVAASVAGKGVLLAPRVPVPPELAFPRGLAAGLLTANALG-LLVADVQALAD 185 Query 189 ELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRIANQVV 248 +LD EA ++ RE F NPAKALA RV+ L G + +A+ H + A V Sbjct 186 QLDLEAEKDYLARESFANPAKALALRVADRVPLLWGLDPVAVAVGEHAAHAFAAHAALVC 245 Query 249 AATRLSDAV-------VALRAGTPPDALFHDEEIDGPAPQRLRVLALALAGERTVVAARV 301 A+ VA G D +F D + D P RVL L++ AAR Sbjct 246 DVEDYRQALARPALRRVAQSGGVQRD-IFADPD-DSPGGVATRVLLLSVRTGPATEAARY 303 Query 302 AGLDDAYLVAAEDV--PELLDAPVGSGGAVLAVRLEMAAVYLRLVRG 346 + ++ A+ + E ++A AVLA+R E+AAVYL L G Sbjct 304 QA--EEFMPGADLIAPAEEIEADEIVRAAVLALRFELAAVYLGLAAG 348 >gi|134102891|ref|YP_001108552.1| hypothetical protein SACE_6458 [Saccharopolyspora erythraea NRRL 2338] gi|291008024|ref|ZP_06565997.1| hypothetical protein SeryN2_26176 [Saccharopolyspora erythraea NRRL 2338] gi|133915514|emb|CAM05627.1| hypothetical protein SACE_6458 [Saccharopolyspora erythraea NRRL 2338] Length=359 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 129/349 (37%), Positives = 176/349 (51%), Gaps = 20/349 (5%) Query 9 LEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAE 68 +D L D G LLR+A+MAGAQVR+ A A E LD L RPR+V+ + G + Sbjct 7 FDDPARLADVDTGGLLRSAAMAGAQVRSAAEVAAETGLDDLSDG-RPRAVVLLARPGVSP 65 Query 69 TAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARV 128 +LA+ G P+V+A AP WVG LDV+ A DD GDP L + ++ RRGA V Sbjct 66 GVCRLLAALAGQSCPVPVVVAETAPTWVGALDVVFAATDDAGDPVLAESVSVAGRRGATV 125 Query 129 VVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRIDLASLAD 188 V+ P EGP+ + AGR V+ P++ VP + AGL+ + L D +LAD Sbjct 126 VLAVPAEGPVAAAAAGRAKVIAPKVPVPPALSFAHAFTAGLSLFGALG-LLHADTEALAD 184 Query 189 ELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVM-------- 240 ELD EA R E+ TNPAK+LA R++ L G + + A+A HG+ + Sbjct 185 ELDREASRAHPSHELLTNPAKSLAMRLADRAPLLWGLDQVSTAVAEHGAYALGCHAGTAC 244 Query 241 -LRIANQVVAATRLSDAVVALRAGTPPDALFHDEEIDGPAPQRLRVLALALAGERTVVA- 298 + Q VA L A L G+ D LF D E + R+ +++ E Sbjct 245 DVSSYQQAVARQALHRAAQGL--GSEAD-LFADPEDNPGGLMRVFLVSARFDAESEATER 301 Query 299 ARVAGLDDAYLVA-AEDVPELLDAPVGSGGAVLAVRLEMAAVYLRLVRG 346 A V L A LV E V + DA + S A+LA R ++AAVYL L G Sbjct 302 AAVRDLPAADLVTPGESVRD--DAVLRS--ALLAARFDLAAVYLGLAAG 346 >gi|66969194|gb|AAY59890.1| TobH [Streptoalloteichus tenebrarius] Length=359 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 102/265 (39%), Positives = 140/265 (53%), Gaps = 12/265 (4%) Query 33 QVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAETAGTILASTLGAGAAEPIVLASAA 92 QVR+ +A E LD G +RPR+++ VT G TA +LA+ LG P+VL+ AA Sbjct 31 QVRSTVESAAEAGLDAF-GGERPRALVLVTRPGAGATASRLLAAMLGPSCPVPVVLSDAA 89 Query 93 PPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARVVVVAPYEGPLRDSTAGRVAVLEPR 152 P WVG LD ++ DDPGD L + + RRG RV++ AP EGP+ + AG+ +L PR Sbjct 90 PSWVGALDAVVAHTDDPGDAVLAESVDLAARRGCRVLLTAPAEGPVAAAAAGQAVLLAPR 149 Query 153 LRVPDEFGLSRYLAAGLAALQTVDPKLRIDLASLADELDAEALRNSAGREVFTNPAKALA 212 + P SR A GL A+ + LR DL+++ADELD EA RN E NPAKALA Sbjct 150 VPSPTGLTFSRAFAGGLLAVNALG-LLRTDLSAVADELDREAERNYVAHESLVNPAKALA 208 Query 213 ARVSGCQLALAGDNAATLALARHGSSVMLRIANQVVAATRLSDAV-------VALRAGTP 265 R++ L G + A +A H + + A V A A+ A+RAG+ Sbjct 209 LRLAERTPLLWGLDPAATTVAGHAADALAGFAGVVADAAGYPQAMTRPVLHRTAVRAGSG 268 Query 266 PDALFHDEEIDGPAPQRLRVLALAL 290 D +E+ R RVL LA+ Sbjct 269 EDLFADPDEVPS---GRPRVLLLAV 290 >gi|300789828|ref|YP_003770119.1| hypothetical protein AMED_8013 [Amycolatopsis mediterranei U32] gi|299799342|gb|ADJ49717.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340531496|gb|AEK46701.1| hypothetical protein RAM_41170 [Amycolatopsis mediterranei S699] Length=362 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 134/349 (39%), Positives = 175/349 (51%), Gaps = 17/349 (4%) Query 9 LEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAE 68 L+D L AD LLRAA+MAGAQVRA A A E EL RPR+V+ + G + Sbjct 7 LDDPARLAEADSAGLLRAAAMAGAQVRATAELAAELELSERLDLGRPRAVVLIDRPGVSR 66 Query 69 TAGTILASTLGAGAAEPIVLASAAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARV 128 T +LA+ L P+V+A P W+G LDV+ DDPGD L + R GA V Sbjct 67 TLTRLLAALLAPSCPVPVVVAEVVPSWIGALDVVFAHTDDPGDRELAASLERAARYGASV 126 Query 129 VVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSRYLAAGLAALQTVDPKLRIDLASLAD 188 V+ P EGP+ + AG+ +L PR+ VP E R LAAGL + L D+ LAD Sbjct 127 VLSGPSEGPVAAAVAGKGLLLAPRIPVPPELAFPRGLAAGLLTANALG-LLISDVQVLAD 185 Query 189 ELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLALARHGSSVMLRIANQV- 247 +LD EA ++ RE F NPAKALA RV+ L G + +A+ H + A V Sbjct 186 QLDLEAEKDYLARESFANPAKALALRVADRVPLLWGLDPVAVAVGEHAAHAFAAHAATVC 245 Query 248 -VAATRLSDAVVALR----AGTPPDALFHDEEIDGPAPQRL--RVLALALAGERTVVAAR 300 V R + A ALR +G +F D D P+ + RVL L++ AAR Sbjct 246 DVEDYRQALARPALRRAAQSGGAERDIFADP--DDPSGDNIPTRVLLLSVRTGPATDAAR 303 Query 301 VAGLDDAYLVAAEDV---PELLDAPVGSGGAVLAVRLEMAAVYLRLVRG 346 D L+ DV E ++A AVLA+R E+AAVYL L G Sbjct 304 YQAED---LLPGADVIAPAEEIEADEIVRAAVLALRFELAAVYLGLAAG 349 >gi|325000905|ref|ZP_08122017.1| hypothetical protein PseP1_19167 [Pseudonocardia sp. P1] Length=323 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 80/217 (37%), Positives = 115/217 (53%), Gaps = 6/217 (2%) Query 43 EGELDLLRGSDRPRSVIWVTGRGTAETAGTILASTLGAGAAEPIVLASAAPPWVGPLDVL 102 E LD LRG RPR+++ + G + ++ + LG P+V A P W+GPLDV+ Sbjct 2 EAGLDRLRGF-RPRALVLLRRPGVSGAVADLVTALLGDRCPVPVVHAERVPGWIGPLDVV 60 Query 103 IVAGDDPGDPALVGAAAIGVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLS 162 + D DP L + A+ VRRGA V+ AP GP+ + AGR ++EPR+ +P+ G + Sbjct 61 VAHSTDSADPELAESIALAVRRGAETVLSAPDLGPVAQAGAGRARLVEPRIPLPEGLGFA 120 Query 163 RYLAAGLAA---LQTVDPKLRIDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQ 219 + L L L+ + P D +LA+ LD EA R G E F NPAK+LA R++ Sbjct 121 QALTVALTTVTELELLGPA--PDTEALAEVLDEEAERCQPGHEPFVNPAKSLALRMAERT 178 Query 220 LALAGDNAATLALARHGSSVMLRIANQVVAATRLSDA 256 L G + A A+ARHG+ + A V A L A Sbjct 179 PLLWGADPAAAAVARHGADALATHAGVVAQADGLGQA 215 >gi|152967782|ref|YP_001363566.1| RpiR family transcriptional regulator [Kineococcus radiotolerans SRS30216] gi|151362299|gb|ABS05302.1| putative transcriptional regulator, RpiR family [Kineococcus radiotolerans SRS30216] Length=385 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 127/367 (35%), Positives = 174/367 (48%), Gaps = 36/367 (9%) Query 9 LEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAE 68 L D +GL AD +LRA + AGAQVR + E + L DRPR+V+ G++ Sbjct 9 LADGDGLTGADETGVLRALASAGAQVREALDLSAEARVARLAEDDRPRAVVIAALAGSSV 68 Query 69 TAGTILASTLGAGAAEPIVLASAAP--PWVGPLDVLI---VAGDDPGDPALVGAAAIGVR 123 A I+ + G G P+V+ + P WVGPLD++I ++G PG AL A+ R Sbjct 69 VA-DIVTALAGRGCPVPVVVRHSGPLPSWVGPLDLVIAVSLSGRAPGPVALAAEAS---R 124 Query 124 RGARVVVVAPYEGPLRDSTA--GRVAVLEPRLRVPDEFGLSRYLAAGLAALQT------- 174 RGARV+ VA PL + A G V VL P V + G R L +L T Sbjct 125 RGARVLAVAGEGSPLAEIGARHGNVHVL-PARGVRADGGDPRSSRVALWSLVTPVLLACD 183 Query 175 ---VDPKLRIDLASLADELDAEALRNSAGREVFTNPAKALAARVSGCQLALAGDNAATLA 231 + P DLA +AD LDAEA E F NPAK +A VSG + GD A Sbjct 184 AMGLLPASAADLAGVADRLDAEAEACRPWSETFVNPAKVIALEVSGAVPVVLGDGDLMAA 243 Query 232 LARHGSSVMLRIANQVVAATRLSD---AVVALRAG---TPPDALFHDEEIDGPAPQRLRV 285 AR + ++ R A + L D VVA G + + +F D +DGP RL++ Sbjct 244 GARRAAGMLARTARVPAVSGALPDDASEVVATFGGPFASTVEDVFADPFLDGPPGPRLQL 303 Query 286 LA-----LALAGE-RTVVAARVAGLDDAYLVAAEDVPELLDAPVGSGGAVLAVRLEMAAV 339 L LA++ E R + A V DA + +E V + +P V+A R++ AA Sbjct 304 LVVRDSPLAVSDEDRRLADAVVTTATDAGVRVSEVVAD-EGSPAQRLAQVIA-RVDFAAA 361 Query 340 YLRLVRG 346 YL L G Sbjct 362 YLALASG 368 >gi|302534799|ref|ZP_07287141.1| SIS regulatory protein [Streptomyces sp. C] gi|302443694|gb|EFL15510.1| SIS regulatory protein [Streptomyces sp. C] Length=377 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 101/314 (33%), Positives = 141/314 (45%), Gaps = 38/314 (12%) Query 9 LEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAE 68 L+ + L ADR LLR A+ AGA+VR A A E L LR RPRSV+ + G GTA Sbjct 7 LDAPDDLARADRRGLLRGAAEAGARVRTAARHATEAGLADLRPDGRPRSVL-IAGSGTAA 65 Query 69 TAGTILASTLGAGAA-----EPIVLASAA-------PPWVGPLDVLIVAGDDPGDPALVG 116 T L L +A P +A AA P W GP+D+L++A D +P L Sbjct 66 TGVADLLGALAGTSAPVTRLHPTGVAHAAGALRWSLPGWAGPVDLLLIATTDGTEPGLAA 125 Query 117 AAAIGVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVP-DEFGLSRYLAAGLAALQTV 175 A RRG VV VAP PL ++ G VL P + P E+ S AAG AL + Sbjct 126 LAEQAYRRGCAVVAVAPERSPLGEAVNGAHGVLVPMAKAPYQEYDES--AAAGPGALWAL 183 Query 176 DPKL-----RIDLAS--------LADELDAEALRNSAGREVFTNPAKALAARVSGCQLAL 222 L ++ L S +AD LD A R ++NPAK LAA ++ + Sbjct 184 LTPLLVLLDKVGLISAAPDALQRVADRLDRTAERCGPAITTYSNPAKTLAAELADSLPLI 243 Query 223 AGDNAATLALARHGSSVMLRIANQVVAATRLSDAVVA--------LRAGTPPDALFHDEE 274 + + R ++ + +A + + L +A+ A AG PD F D Sbjct 244 WSEGEGAGPVGRRFAATLAELAGRPALSATLPEALPAHGVLLAGSFAAGADPDDFFRD-R 302 Query 275 IDGPAPQRLRVLAL 288 ++ P R R++ L Sbjct 303 VEEPQALRARIVLL 316 >gi|291453727|ref|ZP_06593117.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291356676|gb|EFE83578.1| conserved hypothetical protein [Streptomyces albus J1074] Length=385 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 97/320 (31%), Positives = 136/320 (43%), Gaps = 42/320 (13%) Query 9 LEDTEGLIAADRGALLRAASMAGAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAE 68 L+D E L AD LLR A+ AGA+VR A A E + L RPR+V+ + G GTA Sbjct 7 LDDPEALTRADPRGLLRDAAGAGARVRTAARLAAEAGITELHPDGRPRTVL-IAGPGTAA 65 Query 69 TAGTILASTLGAGAAE-----PIVLASAA-------PPWVGPLDVLIVAGDDPGDPALVG 116 TA L TL GA P +A+AA P W GP+D+L++A D G+P L Sbjct 66 TATADLLGTLAGGACPVVPLGPTGVAAAAGALRWTLPGWAGPVDLLLIATPDGGEPGLAL 125 Query 117 AAAIGVRRGARVVVVAPYEGPLRDSTAGRVAVLEPRLRVPDEFGLSR------------- 163 A RRG VV VAP P+ ++ G + P P E Sbjct 126 LAEQAYRRGCTVVAVAPDRTPVSEAVQGAHGLAVPMATAPGELPEEEPVEAYANGTTAAS 185 Query 164 --YLAAGLAALQTVDPKLRID-----LASLADELDAEALRNSAGREVFTNPAKALAARVS 216 + A L + +D + LAD LD A R ++NPAK LAA ++ Sbjct 186 GAFWALLTPLLLLLGRTGLVDADTDAVHDLADRLDTTAERCGPAVAAYSNPAKTLAAELA 245 Query 217 GCQLALAGDNAATLALARHGSSVMLRIANQVVAATRLSDAVVALRA--------GTPPDA 268 + + + R ++++ +A L +A+ A A + PD Sbjct 246 ESLPLVWTEGPGAGPIGRRFTALLAEVAGHPALTAALPEALPAHGALLVSGIADASDPDD 305 Query 269 LFHDEEIDGPAPQRLRVLAL 288 F D +D P P R RV+ L Sbjct 306 FFRD-RVDEPEPLRARVVLL 324 >gi|145294909|ref|YP_001137730.1| hypothetical protein cgR_0856 [Corynebacterium glutamicum R] gi|140844829|dbj|BAF53828.1| hypothetical protein [Corynebacterium glutamicum R] Length=335 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 84/254 (34%), Positives = 119/254 (47%), Gaps = 13/254 (5%) Query 31 GAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAETAGTILASTLGAGAAEPIVLAS 90 GAQVR I +G L G RPRSV+ V G + L TL + +P+V+ S Sbjct 28 GAQVRLIGGLVAQGALSAFEGL-RPRSVV-VMLDGQIHRSCVRLVETLHSPMRQPLVITS 85 Query 91 AAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARVVVVAPYEGPLRDSTAGRVAVLE 150 P ++G LDVLIV D+ D + A + +RG +++ P GPL D + VL Sbjct 86 TLPHYIGALDVLIVITDNGADEKALKALIMASQRGVTTLLIGPSSGPLIDESPQDTFVL- 144 Query 151 PRLRVPDEFGLS--RYLA--AGLAALQTVDPKLRID-LASLADELDAEALRNSAGREVFT 205 P L P GLS R +A + L L DP + D L LAD +D E S R+ Sbjct 145 PTL--PTAAGLSPARIVASISTLLDLLEADPSIISDRLEHLADCIDEEVESLSPERDELV 202 Query 206 NPAKALAARVSGCQLALAGDNAATLALARHGSSVMLR--IANQVVAATRLSDAVVALRAG 263 NP + L A V ++ G LA+A + + R + + V+ L +++ LR Sbjct 203 NPGRKLRAYVDHARIVHTGRTDVGLAIANVIAPIWTRRGLVSAVLDFPELMESLPELRGP 262 Query 264 TP-PDALFHDEEID 276 P D +FHD ID Sbjct 263 EPITDDIFHDPFID 276 >gi|344043752|gb|EGV39440.1| hypothetical protein CgS9114_13276 [Corynebacterium glutamicum S9114] Length=335 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/254 (34%), Positives = 118/254 (47%), Gaps = 13/254 (5%) Query 31 GAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAETAGTILASTLGAGAAEPIVLAS 90 GAQVR I +G L G RPRSV+ V G + L TL + +P+V+ S Sbjct 28 GAQVRLIGGLVAQGALSAFEGL-RPRSVV-VMLDGQIHRSCVRLVETLHSPMRQPLVITS 85 Query 91 AAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARVVVVAPYEGPLRDSTAGRVAVLE 150 P ++G LDVLIV D+ D + A +RG +++ P GPL D + VL Sbjct 86 TLPHYIGALDVLIVITDNGADEKALKALITASQRGVTTLLIGPSSGPLIDESPQDTFVL- 144 Query 151 PRLRVPDEFGLS--RYLA--AGLAALQTVDPKLRID-LASLADELDAEALRNSAGREVFT 205 P L P GLS R +A + L L DP + D L LAD +D E S R+ Sbjct 145 PTL--PTAAGLSPARIVASISTLLDLLEADPSIISDRLEHLADCIDEEVESLSPERDELV 202 Query 206 NPAKALAARVSGCQLALAGDNAATLALARHGSSVMLR--IANQVVAATRLSDAVVALRAG 263 NP + L A V ++ G LA+A + + R + + V+ L +++ LR Sbjct 203 NPGRKLRAYVDHARIVHTGRTDVGLAIANVIAPIWTRRGLVSAVLDFPELMESLPELRGP 262 Query 264 TP-PDALFHDEEID 276 P D +FHD ID Sbjct 263 EPITDDIFHDPFID 276 >gi|19551975|ref|NP_599977.1| hypothetical protein NCgl0715 [Corynebacterium glutamicum ATCC 13032] gi|62389636|ref|YP_225038.1| hypothetical protein cg0855 [Corynebacterium glutamicum ATCC 13032] gi|21323513|dbj|BAB98140.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] gi|41324971|emb|CAF19452.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length=335 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/254 (34%), Positives = 118/254 (47%), Gaps = 13/254 (5%) Query 31 GAQVRAIAAAADEGELDLLRGSDRPRSVIWVTGRGTAETAGTILASTLGAGAAEPIVLAS 90 GAQVR I +G L G RPRSV+ V G + L TL + +P+V+ S Sbjct 28 GAQVRQIGGLVAQGALSAFEGL-RPRSVV-VMLDGQIHRSCVRLVETLHSPMRQPLVITS 85 Query 91 AAPPWVGPLDVLIVAGDDPGDPALVGAAAIGVRRGARVVVVAPYEGPLRDSTAGRVAVLE 150 P ++G LDVLIV D+ D + A +RG +++ P GPL D + VL Sbjct 86 TLPHYIGALDVLIVITDNGADEKALKALITASQRGVATLLIGPSSGPLIDESPQDTFVL- 144 Query 151 PRLRVPDEFGLS--RYLA--AGLAALQTVDPKLRID-LASLADELDAEALRNSAGREVFT 205 P L P GLS R +A + L L DP + D L LAD +D E S R+ Sbjct 145 PTL--PTAAGLSPARIVASISTLLDLLEADPSIISDRLEHLADCIDEEVESLSPERDELV 202 Query 206 NPAKALAARVSGCQLALAGDNAATLALARHGSSVMLR--IANQVVAATRLSDAVVALRAG 263 NP + L A V ++ G LA+A + + R + + V+ L +++ LR Sbjct 203 NPGRKLRAYVDHARIVHTGRTDVGLAIANVIAPIWTRRGLVSAVLDFPELMESLPELRGP 262 Query 264 TP-PDALFHDEEID 276 P D +FHD ID Sbjct 263 EPITDDIFHDPFID 276 Lambda K H 0.318 0.134 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 636071322808 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40