BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3258c Length=163 Score E Sequences producing significant alignments: (Bits) Value gi|15610394|ref|NP_217775.1| hypothetical protein Rv3258c [Mycob... 318 1e-85 gi|289763447|ref|ZP_06522825.1| conserved hypothetical protein [... 316 9e-85 gi|308378248|ref|ZP_07482015.2| hypothetical protein TMIG_02775 ... 313 6e-84 gi|289751952|ref|ZP_06511330.1| conserved hypothetical protein [... 282 2e-74 gi|339296085|gb|AEJ48196.1| hypothetical protein CCDC5079_3006 [... 251 2e-65 gi|41409468|ref|NP_962304.1| hypothetical protein MAP3370c [Myco... 238 3e-61 gi|118618073|ref|YP_906405.1| hypothetical protein MUL_2603 [Myc... 235 2e-60 gi|15827328|ref|NP_301591.1| hypothetical protein ML0762 [Mycoba... 232 2e-59 gi|118471977|ref|YP_886203.1| hypothetical protein MSMEG_1833 [M... 199 9e-50 gi|145225305|ref|YP_001135983.1| hypothetical protein Mflv_4727 ... 183 8e-45 gi|119867394|ref|YP_937346.1| hypothetical protein Mkms_1344 [My... 183 9e-45 gi|108798298|ref|YP_638495.1| hypothetical protein Mmcs_1327 [My... 178 2e-43 gi|240172598|ref|ZP_04751257.1| hypothetical protein MkanA1_2501... 177 3e-43 gi|118465957|ref|YP_883362.1| hypothetical protein MAV_4221 [Myc... 175 2e-42 gi|254776657|ref|ZP_05218173.1| hypothetical protein MaviaA2_185... 174 4e-42 gi|296168947|ref|ZP_06850616.1| conserved hypothetical protein [... 174 4e-42 gi|254821370|ref|ZP_05226371.1| hypothetical protein MintA_15642... 173 9e-42 gi|126433965|ref|YP_001069656.1| hypothetical protein Mjls_1363 ... 171 2e-41 gi|120402736|ref|YP_952565.1| hypothetical protein Mvan_1736 [My... 169 9e-41 gi|315445603|ref|YP_004078482.1| hypothetical protein Mspyr1_406... 166 9e-40 gi|342861461|ref|ZP_08718108.1| hypothetical protein MCOL_21351 ... 162 2e-38 gi|333991647|ref|YP_004524261.1| hypothetical protein JDM601_300... 148 3e-34 gi|226365786|ref|YP_002783569.1| hypothetical protein ROP_63770 ... 145 2e-33 gi|54026597|ref|YP_120839.1| hypothetical protein nfa46240 [Noca... 144 6e-33 gi|312140687|ref|YP_004008023.1| hypothetical protein REQ_33480 ... 143 7e-33 gi|226305643|ref|YP_002765603.1| hypothetical protein RER_21560 ... 142 1e-32 gi|229489531|ref|ZP_04383394.1| conserved hypothetical protein [... 141 3e-32 gi|169630684|ref|YP_001704333.1| hypothetical protein MAB_3604c ... 141 4e-32 gi|111023278|ref|YP_706250.1| hypothetical protein RHA1_ro06315 ... 140 6e-32 gi|317506112|ref|ZP_07963937.1| hypothetical protein HMPREF9336_... 127 5e-28 gi|296393058|ref|YP_003657942.1| hypothetical protein Srot_0629 ... 126 9e-28 gi|319948498|ref|ZP_08022631.1| hypothetical protein ES5_03971 [... 126 9e-28 gi|296138913|ref|YP_003646156.1| hypothetical protein Tpau_1186 ... 125 3e-27 gi|213964882|ref|ZP_03393081.1| conserved hypothetical protein [... 120 5e-26 gi|331698953|ref|YP_004335192.1| hypothetical protein Psed_5202 ... 119 2e-25 gi|256380316|ref|YP_003103976.1| hypothetical protein Amir_6328 ... 118 3e-25 gi|325675683|ref|ZP_08155367.1| hypothetical protein HMPREF0724_... 118 3e-25 gi|284992678|ref|YP_003411232.1| hypothetical protein Gobs_4299 ... 117 5e-25 gi|257057073|ref|YP_003134905.1| hypothetical protein Svir_31030... 117 5e-25 gi|325000743|ref|ZP_08121855.1| hypothetical protein PseP1_18337... 117 5e-25 gi|116669757|ref|YP_830690.1| hypothetical protein Arth_1196 [Ar... 115 1e-24 gi|117927672|ref|YP_872223.1| hypothetical protein Acel_0463 [Ac... 115 2e-24 gi|302534802|ref|ZP_07287144.1| conserved hypothetical protein [... 115 2e-24 gi|145593507|ref|YP_001157804.1| hypothetical protein Strop_0949... 115 2e-24 gi|302530044|ref|ZP_07282386.1| conserved hypothetical protein [... 114 5e-24 gi|25027317|ref|NP_737371.1| hypothetical protein CE0761 [Coryne... 114 5e-24 gi|325962631|ref|YP_004240537.1| hypothetical protein Asphe3_122... 114 6e-24 gi|159036546|ref|YP_001535799.1| hypothetical protein Sare_0891 ... 114 6e-24 gi|336119564|ref|YP_004574341.1| hypothetical protein MLP_39240 ... 114 7e-24 gi|296130181|ref|YP_003637431.1| hypothetical protein Cfla_2342 ... 114 7e-24 >gi|15610394|ref|NP_217775.1| hypothetical protein Rv3258c [Mycobacterium tuberculosis H37Rv] gi|15842847|ref|NP_337884.1| hypothetical protein MT3356 [Mycobacterium tuberculosis CDC1551] gi|31794438|ref|NP_856931.1| hypothetical protein Mb3286c [Mycobacterium bovis AF2122/97] 68 more sequence titles Length=163 Score = 318 bits (816), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%) Query 1 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW 60 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW Sbjct 1 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW 60 Query 61 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP 120 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP Sbjct 61 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP 120 Query 121 LHGFDDFPAAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD 163 LHGFDDFPAAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD Sbjct 121 LHGFDDFPAAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD 163 >gi|289763447|ref|ZP_06522825.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289710953|gb|EFD74969.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=163 Score = 316 bits (809), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 162/163 (99%), Positives = 162/163 (99%), Gaps = 0/163 (0%) Query 1 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW 60 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW Sbjct 1 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW 60 Query 61 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP 120 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP Sbjct 61 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP 120 Query 121 LHGFDDFPAAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD 163 LHGFDDFPAAATGAPTGGG LAPPEPGAGRRRGHLRVLPDPAD Sbjct 121 LHGFDDFPAAATGAPTGGGGLAPPEPGAGRRRGHLRVLPDPAD 163 >gi|308378248|ref|ZP_07482015.2| hypothetical protein TMIG_02775 [Mycobacterium tuberculosis SUMu009] gi|308379466|ref|ZP_07486367.2| hypothetical protein TMJG_03442 [Mycobacterium tuberculosis SUMu010] gi|308406101|ref|ZP_07495132.2| hypothetical protein TMLG_02030 [Mycobacterium tuberculosis SUMu012] gi|308353206|gb|EFP42057.1| hypothetical protein TMIG_02775 [Mycobacterium tuberculosis SUMu009] gi|308356946|gb|EFP45797.1| hypothetical protein TMJG_03442 [Mycobacterium tuberculosis SUMu010] gi|308364486|gb|EFP53337.1| hypothetical protein TMLG_02030 [Mycobacterium tuberculosis SUMu012] gi|339299696|gb|AEJ51806.1| hypothetical protein CCDC5180_2969 [Mycobacterium tuberculosis CCDC5180] Length=161 Score = 313 bits (802), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 160/161 (99%), Positives = 161/161 (100%), Gaps = 0/161 (0%) Query 3 VSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDL 62 +SGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDL Sbjct 1 MSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDL 60 Query 63 CVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLH 122 CVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLH Sbjct 61 CVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLH 120 Query 123 GFDDFPAAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD 163 GFDDFPAAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD Sbjct 121 GFDDFPAAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD 161 >gi|289751952|ref|ZP_06511330.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289692539|gb|EFD59968.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=162 Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 149/163 (92%), Positives = 149/163 (92%), Gaps = 1/163 (0%) Query 1 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW 60 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW Sbjct 1 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW 60 Query 61 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP 120 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP Sbjct 61 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP 120 Query 121 LHGFDDFPAAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD 163 LHGFDDFPAAATGAPTG L P G G R VLPDPAD Sbjct 121 LHGFDDFPAAATGAPTGVACLRRPSLGPGAARTST-VLPDPAD 162 >gi|339296085|gb|AEJ48196.1| hypothetical protein CCDC5079_3006 [Mycobacterium tuberculosis CCDC5079] Length=130 Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 129/130 (99%), Positives = 130/130 (100%), Gaps = 0/130 (0%) Query 34 VATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRHAGPLPSHPDEDD 93 +ATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRHAGPLPSHPDEDD Sbjct 1 MATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRHAGPLPSHPDEDD 60 Query 94 LVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGVLAPPEPGAGRRRG 153 LVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGVLAPPEPGAGRRRG Sbjct 61 LVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGVLAPPEPGAGRRRG 120 Query 154 HLRVLPDPAD 163 HLRVLPDPAD Sbjct 121 HLRVLPDPAD 130 >gi|41409468|ref|NP_962304.1| hypothetical protein MAP3370c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398299|gb|AAS05920.1| hypothetical protein MAP_3370c [Mycobacterium avium subsp. paratuberculosis K-10] Length=165 Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 126/166 (76%), Positives = 134/166 (81%), Gaps = 4/166 (2%) Query 1 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW 60 MRVSGASAA HDSLS VNVPRRCCRPGCPHYAVATLTFVYSDSTAV+GPLATAREPHSW Sbjct 1 MRVSGASAAFAHDSLSSVNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATAREPHSW 60 Query 61 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP 120 DLCV HAGRITAPRGW+LVRHAGPLP+HPDEDDLVALADAVREGG SA R G P Sbjct 61 DLCVNHAGRITAPRGWDLVRHAGPLPTHPDEDDLVALADAVREGG-SAERTLPYAGAAVP 119 Query 121 LHGFDD---FPAAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD 163 +GF D P A ++APPE +GRRRGHLRVLPDP+D Sbjct 120 RNGFGDPHLHPGGAQATAPSSSLIAPPEQRSGRRRGHLRVLPDPSD 165 >gi|118618073|ref|YP_906405.1| hypothetical protein MUL_2603 [Mycobacterium ulcerans Agy99] gi|183981306|ref|YP_001849597.1| hypothetical protein MMAR_1284 [Mycobacterium marinum M] gi|118570183|gb|ABL04934.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] gi|183174632|gb|ACC39742.1| conserved hypothetical protein [Mycobacterium marinum M] Length=165 Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 128/166 (78%), Positives = 134/166 (81%), Gaps = 4/166 (2%) Query 1 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW 60 MRVS SAA HDSL +VNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW Sbjct 1 MRVSAPSAAFPHDSLCLVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW 60 Query 61 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP 120 DLCVGHAGRITAPRGWELVRHAGPLP+HPDEDDLVALADAVRE GP+A G GA Sbjct 61 DLCVGHAGRITAPRGWELVRHAGPLPTHPDEDDLVALADAVREQGPTADAS-CAGATGAA 119 Query 121 LHGFDDFPAAATGAPT---GGGVLAPPEPGAGRRRGHLRVLPDPAD 163 +GF D GA GGVLA PE +GRRRGHLRVLPDP+D Sbjct 120 HNGFSDQVMRHAGAHATAPSGGVLASPEHRSGRRRGHLRVLPDPSD 165 >gi|15827328|ref|NP_301591.1| hypothetical protein ML0762 [Mycobacterium leprae TN] gi|221229806|ref|YP_002503222.1| hypothetical protein MLBr_00762 [Mycobacterium leprae Br4923] gi|13092877|emb|CAC30271.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932913|emb|CAR70856.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=165 Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 128/168 (77%), Positives = 134/168 (80%), Gaps = 8/168 (4%) Query 1 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW 60 MRVSGASA HDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAV+GPLAT REPHSW Sbjct 1 MRVSGASATFSHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATVREPHSW 60 Query 61 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNG-- 118 DLCV HA RITAPRGWELVRHAGPLPS+PDEDDLVALADAVREG G H GNG Sbjct 61 DLCVDHAARITAPRGWELVRHAGPLPSNPDEDDLVALADAVREG---PGGEHGSYGNGAR 117 Query 119 APLHGFDDFPAAATGAPT---GGGVLAPPEPGAGRRRGHLRVLPDPAD 163 A L GF D + GA GG+LAP E +GRRRGHLRVLPDP+D Sbjct 118 ASLGGFADPQLQSAGAHATVPSGGLLAPSELRSGRRRGHLRVLPDPSD 165 >gi|118471977|ref|YP_886203.1| hypothetical protein MSMEG_1833 [Mycobacterium smegmatis str. MC2 155] gi|118173264|gb|ABK74160.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=139 Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 111/150 (74%), Positives = 118/150 (79%), Gaps = 15/150 (10%) Query 18 VNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWE 77 +NVPRRCCRPGCPHYAVATLTFVYSDSTAV+GPLAT EPHSWDLCVGHA RITAP+GWE Sbjct 1 MNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATVSEPHSWDLCVGHASRITAPKGWE 60 Query 78 LVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTG 137 LVRHAGPLP+HPDEDDLVALADAVREG R PG + GF D PA TG+ Sbjct 61 LVRHAGPLPTHPDEDDLVALADAVREG------RTGPGPVNGVVAGFSD-PATGTGS--- 110 Query 138 GGVLAP----PEPGAGRRRGHLRVLPDPAD 163 G V+AP PEP GRRRGHLRVLPDP D Sbjct 111 GAVIAPPVRQPEPN-GRRRGHLRVLPDPTD 139 >gi|145225305|ref|YP_001135983.1| hypothetical protein Mflv_4727 [Mycobacterium gilvum PYR-GCK] gi|145217791|gb|ABP47195.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=181 Score = 183 bits (464), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 113/166 (69%), Positives = 126/166 (76%), Gaps = 7/166 (4%) Query 1 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW 60 +RVSG A+VH +L +VNVPRRCCRPGCPHYAVATLTFVY+DSTAV+GPLAT EPHSW Sbjct 20 LRVSGVMQAIVHANLLLVNVPRRCCRPGCPHYAVATLTFVYADSTAVVGPLATVSEPHSW 79 Query 61 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP 120 DLCV HAGRITAPRGWELVRHAGPLP+HPD+DDLVALADAVREG G G + Sbjct 80 DLCVMHAGRITAPRGWELVRHAGPLPTHPDDDDLVALADAVREGREVPGAGVTAGFSAGL 139 Query 121 LHGFDDFPAAATGAPTGGGVLAPPE---PGAGRRRGHLRVLPDPAD 163 GF D + A GG ++APP GRRRGHLRVLPDPA+ Sbjct 140 NTGFTDPVSGA----HGGALMAPPARRPETNGRRRGHLRVLPDPAE 181 >gi|119867394|ref|YP_937346.1| hypothetical protein Mkms_1344 [Mycobacterium sp. KMS] gi|119693483|gb|ABL90556.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=155 Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 117/165 (71%), Positives = 124/165 (76%), Gaps = 14/165 (8%) Query 3 VSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDL 62 +SG + L DSL VNVPRRCCRPGCPHYAVATLTFVYSDSTAV+GPLAT EPHSWDL Sbjct 1 MSGTTRRLSRDSLPFVNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATVSEPHSWDL 60 Query 63 CVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLH 122 CVGHAGRITAPRGWELVRHAGPLPSH D+DDLVALADAVREG S G GA + Sbjct 61 CVGHAGRITAPRGWELVRHAGPLPSHTDDDDLVALADAVREGRDSTG-----PTAGAVVP 115 Query 123 GFDDFPAAATGAPTGGGVLAP----PEPGAGRRRGHLRVLPDPAD 163 GF D T G +LAP PEP GRRRGHLRVLPDPA+ Sbjct 116 GFSD----PTSGAQSGALLAPPVRRPEP-TGRRRGHLRVLPDPAE 155 >gi|108798298|ref|YP_638495.1| hypothetical protein Mmcs_1327 [Mycobacterium sp. MCS] gi|108768717|gb|ABG07439.1| conserved hypothetical protein [Mycobacterium sp. MCS] Length=148 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 114/158 (73%), Positives = 120/158 (76%), Gaps = 14/158 (8%) Query 10 LVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGR 69 + DSL VNVPRRCCRPGCPHYAVATLTFVYSDSTAV+GPLAT EPHSWDLCVGHAGR Sbjct 1 MSRDSLPFVNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATVSEPHSWDLCVGHAGR 60 Query 70 ITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPA 129 ITAPRGWELVRHAGPLPSH D+DDLVALADAVREG S G GA + GF D Sbjct 61 ITAPRGWELVRHAGPLPSHTDDDDLVALADAVREGRDSTG-----PTAGAVVPGFSD--- 112 Query 130 AATGAPTGGGVLAP----PEPGAGRRRGHLRVLPDPAD 163 T G +LAP PEP GRRRGHLRVLPDPA+ Sbjct 113 -PTSGAQSGALLAPPVRRPEP-TGRRRGHLRVLPDPAE 148 >gi|240172598|ref|ZP_04751257.1| hypothetical protein MkanA1_25010 [Mycobacterium kansasii ATCC 12478] Length=140 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/140 (73%), Positives = 107/140 (77%), Gaps = 10/140 (7%) Query 34 VATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRHAGPLPSHPDEDD 93 +ATLTFVYSDSTAV+GPLATAREPHSWDLCV HAGRITAPRGWELVRHAGPLP++PDEDD Sbjct 1 MATLTFVYSDSTAVVGPLATAREPHSWDLCVSHAGRITAPRGWELVRHAGPLPTNPDEDD 60 Query 94 LVALADAVREGGPSAGRRH---HPGGNGAPLHGFDDFPAAATGAPTG-------GGVLAP 143 LVALADAVREGGP A + HPG NG+ GF D G G GGVLAP Sbjct 61 LVALADAVREGGPVAAGAYSVAHPGRNGSSHDGFPDPVVHHAGVHAGVHAKAPSGGVLAP 120 Query 144 PEPGAGRRRGHLRVLPDPAD 163 PE GRRRGHLRVLPDP D Sbjct 121 PEHRNGRRRGHLRVLPDPPD 140 >gi|118465957|ref|YP_883362.1| hypothetical protein MAV_4221 [Mycobacterium avium 104] gi|118167244|gb|ABK68141.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336459666|gb|EGO38601.1| Protein of unknown function (DUF3499) [Mycobacterium avium subsp. paratuberculosis S397] Length=132 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/133 (72%), Positives = 104/133 (79%), Gaps = 4/133 (3%) Query 34 VATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRHAGPLPSHPDEDD 93 +ATLTFVYSDSTAV+GPLATAREPHSWDLCV HAGRITAPRGW+LVRHAGPLP+HPDEDD Sbjct 1 MATLTFVYSDSTAVVGPLATAREPHSWDLCVNHAGRITAPRGWDLVRHAGPLPTHPDEDD 60 Query 94 LVALADAVREGGPSAGRRHHPGGNGAPLHGFDD---FPAAATGAPTGGGVLAPPEPGAGR 150 LVALADAVREGG SA R G P +GF D P A ++APPE +GR Sbjct 61 LVALADAVREGG-SAERTLPYAGAAVPRNGFGDPHLHPGGAQATAPSSSLIAPPEQRSGR 119 Query 151 RRGHLRVLPDPAD 163 RRGHLRVLPDP+D Sbjct 120 RRGHLRVLPDPSD 132 >gi|254776657|ref|ZP_05218173.1| hypothetical protein MaviaA2_18591 [Mycobacterium avium subsp. avium ATCC 25291] Length=132 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 94/133 (71%), Positives = 103/133 (78%), Gaps = 4/133 (3%) Query 34 VATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRHAGPLPSHPDEDD 93 +ATLTFVYSDSTAV+GPLATAREPHSWDLCV HAGRITAPRGW+LVRHAGPLP+HPDEDD Sbjct 1 MATLTFVYSDSTAVVGPLATAREPHSWDLCVNHAGRITAPRGWDLVRHAGPLPTHPDEDD 60 Query 94 LVALADAVREGGPSAGRRHHPGGNGAPLHGFDD---FPAAATGAPTGGGVLAPPEPGAGR 150 LVALADAVREGG SA R G P +GF D P ++APPE +GR Sbjct 61 LVALADAVREGG-SAERTLPYAGAAVPRNGFGDPHLHPGGTQATAPSSSLIAPPEQRSGR 119 Query 151 RRGHLRVLPDPAD 163 RRGHLRVLPDP+D Sbjct 120 RRGHLRVLPDPSD 132 >gi|296168947|ref|ZP_06850616.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896416|gb|EFG76069.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=133 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 100/136 (74%), Positives = 110/136 (81%), Gaps = 9/136 (6%) Query 34 VATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRHAGPL---PSHPD 90 +ATLTFVYSDSTAV+GPLATAREPHSWDLCVGHAGRITAPRGW+LVRHAGPL P+HPD Sbjct 1 MATLTFVYSDSTAVVGPLATAREPHSWDLCVGHAGRITAPRGWDLVRHAGPLFSEPTHPD 60 Query 91 EDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDD--FPAAATGAPT-GGGVLAPPEPG 147 EDDLVALADAVREG P G R P G GAP++GF D P + + A VLAPPE Sbjct 61 EDDLVALADAVREGAP--GERAMPYG-GAPINGFADPHIPHSGSQATAPSSSVLAPPEHR 117 Query 148 AGRRRGHLRVLPDPAD 163 +GRRRGHLRVLPDP+D Sbjct 118 SGRRRGHLRVLPDPSD 133 >gi|254821370|ref|ZP_05226371.1| hypothetical protein MintA_15642 [Mycobacterium intracellulare ATCC 13950] Length=132 Score = 173 bits (438), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 99/135 (74%), Positives = 108/135 (80%), Gaps = 8/135 (5%) Query 34 VATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRHAGPLPSHPDEDD 93 +ATLTFVYSDSTAV+GPLATAREPHSWDLCV HAGRITAPRGWELVRHAGPLP+HPDEDD Sbjct 1 MATLTFVYSDSTAVVGPLATAREPHSWDLCVNHAGRITAPRGWELVRHAGPLPTHPDEDD 60 Query 94 LVALADAVREGGPSAGRRHHP-GGNGAPLHGFDD----FPAAATGAPTGGGVLAPPEPGA 148 LVALADAVREGG +G R P GG P++GF D AP+ VLAPPE + Sbjct 61 LVALADAVREGG--SGDRGAPYGGAPTPVNGFADPHLHHGGTQATAPS-SSVLAPPEHRS 117 Query 149 GRRRGHLRVLPDPAD 163 GRRRGHLRVLPDP+D Sbjct 118 GRRRGHLRVLPDPSD 132 >gi|126433965|ref|YP_001069656.1| hypothetical protein Mjls_1363 [Mycobacterium sp. JLS] gi|126233765|gb|ABN97165.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=140 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 110/150 (74%), Positives = 116/150 (78%), Gaps = 14/150 (9%) Query 18 VNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWE 77 +NVPRRCCRPGCPHYAVATLTFVYSDSTAV+GPLAT EPHSWDLCVGHAGRITAPRGWE Sbjct 1 MNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATVSEPHSWDLCVGHAGRITAPRGWE 60 Query 78 LVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTG 137 LVRHAGPLPSH D+DDLVALADAVREG S G GA + GF D T Sbjct 61 LVRHAGPLPSHTDDDDLVALADAVREGRDSTG-----PTAGAVVPGFSD----PTSGAQS 111 Query 138 GGVLAP----PEPGAGRRRGHLRVLPDPAD 163 G +LAP PEP GRRRGHLRVLPDPA+ Sbjct 112 GALLAPPVRRPEP-TGRRRGHLRVLPDPAE 140 >gi|120402736|ref|YP_952565.1| hypothetical protein Mvan_1736 [Mycobacterium vanbaalenii PYR-1] gi|119955554|gb|ABM12559.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=138 Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 108/150 (72%), Positives = 115/150 (77%), Gaps = 16/150 (10%) Query 18 VNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWE 77 +NVPRRCCRPGCPHYAVATLTFVYSDSTAV+GPLAT EPHSWDLCV HAGRITAPRGWE Sbjct 1 MNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATVSEPHSWDLCVMHAGRITAPRGWE 60 Query 78 LVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFD-DFPAAATGAPT 136 LVRHAGPLPSHPD+DDLVALADAVRE G + AP+ GF F TGA Sbjct 61 LVRHAGPLPSHPDDDDLVALADAVRE-----------GRDAAPVAGFTVGFSDPVTGA-H 108 Query 137 GGGVLAPPE---PGAGRRRGHLRVLPDPAD 163 GG ++APP GRRRGHLRVLPDP D Sbjct 109 GGALMAPPARRPETNGRRRGHLRVLPDPTD 138 >gi|315445603|ref|YP_004078482.1| hypothetical protein Mspyr1_40610 [Mycobacterium sp. Spyr1] gi|315263906|gb|ADU00648.1| hypothetical protein Mspyr1_40610 [Mycobacterium sp. Spyr1] Length=145 Score = 166 bits (421), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 104/149 (70%), Positives = 113/149 (76%), Gaps = 7/149 (4%) Query 18 VNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWE 77 +NVPRRCCRPGCPHYAVATLTFVY+DSTAV+GPLAT EPHSWDLCV HAGRITAPRGWE Sbjct 1 MNVPRRCCRPGCPHYAVATLTFVYADSTAVVGPLATVSEPHSWDLCVMHAGRITAPRGWE 60 Query 78 LVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTG 137 LVRHAGPLP+HPD+DDLVALADAVREG G G GF D + A G Sbjct 61 LVRHAGPLPTHPDDDDLVALADAVREGREVPGAGVTAGFTAGLNTGFTDPVSGA----HG 116 Query 138 GGVLAPPE---PGAGRRRGHLRVLPDPAD 163 G ++APP GRRRGHLRVLPDPA+ Sbjct 117 GALMAPPARRPETNGRRRGHLRVLPDPAE 145 >gi|342861461|ref|ZP_08718108.1| hypothetical protein MCOL_21351 [Mycobacterium colombiense CECT 3035] gi|342130950|gb|EGT84239.1| hypothetical protein MCOL_21351 [Mycobacterium colombiense CECT 3035] Length=131 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/136 (68%), Positives = 101/136 (75%), Gaps = 11/136 (8%) Query 34 VATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRHAGPL---PSHPD 90 +ATLTFVYSDSTAV+GPLATAREPHSWDLCV HAGRITAPRGWELVRHAGPL P+HPD Sbjct 1 MATLTFVYSDSTAVVGPLATAREPHSWDLCVNHAGRITAPRGWELVRHAGPLLSEPAHPD 60 Query 91 EDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPT---GGGVLAPPEPG 147 EDDLVALADAVREG A P++GF D G+ +LAPPE Sbjct 61 EDDLVALADAVREGDDRAAPY-----AATPVNGFADAHIHHGGSQATAPSSSLLAPPEHR 115 Query 148 AGRRRGHLRVLPDPAD 163 +GRRRGHLRVLPDP+D Sbjct 116 SGRRRGHLRVLPDPSD 131 >gi|333991647|ref|YP_004524261.1| hypothetical protein JDM601_3007 [Mycobacterium sp. JDM601] gi|333487615|gb|AEF37007.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=130 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 88/140 (63%), Positives = 97/140 (70%), Gaps = 20/140 (14%) Query 34 VATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRHAGPLPSHPDEDD 93 +ATLTFVYSDSTAV+GPLATA EPHSWDLC HAGRITAPRGWELVRH GP S P+EDD Sbjct 1 MATLTFVYSDSTAVVGPLATAAEPHSWDLCFSHAGRITAPRGWELVRHPGPWVS-PEEDD 59 Query 94 LVALADAVREGGPSAGRRHHPGGNGAPLHGF-------DDFPAAATGAPTGGGVLAPPEP 146 L+ALA+AVREG G AP +G+ D A+ GGGVLAPP P Sbjct 60 LIALAEAVREG---------QSGQAAPANGWYPQAGPADTGSRGASSGTPGGGVLAPPGP 110 Query 147 ---GAGRRRGHLRVLPDPAD 163 GRRRGHLRVLPDP+D Sbjct 111 PGKSNGRRRGHLRVLPDPSD 130 >gi|226365786|ref|YP_002783569.1| hypothetical protein ROP_63770 [Rhodococcus opacus B4] gi|226244276|dbj|BAH54624.1| hypothetical protein [Rhodococcus opacus B4] Length=138 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 84/147 (58%), Positives = 91/147 (62%), Gaps = 17/147 (11%) Query 18 VNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWE 77 V RRCCRPGC + AVATLT+VYSDSTAV+GPLAT EPHSWDLC HA RITAP+GWE Sbjct 8 VRSLRRCCRPGCKNPAVATLTYVYSDSTAVVGPLATVDEPHSWDLCETHASRITAPKGWE 67 Query 78 LVRHAGPLPSH-PDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPT 136 LVR+ G S PDEDDL ALA+AVRE G G G A TG Sbjct 68 LVRYEGGFSSSTPDEDDLTALAEAVREAG--------LGDRGRSERALSTEERAETG--- 116 Query 137 GGGVLAPPEPGAGRRRGHLRVLPDPAD 163 P P RRGHLRVLPDPA+ Sbjct 117 -----TQPGPARTGRRGHLRVLPDPAN 138 >gi|54026597|ref|YP_120839.1| hypothetical protein nfa46240 [Nocardia farcinica IFM 10152] gi|54018105|dbj|BAD59475.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=125 Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 82/142 (58%), Positives = 93/142 (66%), Gaps = 22/142 (15%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 RRCCRPGC + AVATLT+VYSDSTAV+GPLAT EPHSWDLC HA RITAP+GWELVRH Sbjct 2 RRCCRPGCKNPAVATLTYVYSDSTAVVGPLATVAEPHSWDLCETHASRITAPKGWELVRH 61 Query 82 AGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGVL 141 G + PD+DDL ALA+AVRE G RR P + G+ ++ Sbjct 62 EGGFSTSPDDDDLTALAEAVREAG---LRRRPPEADQ---RGYREY-------------- 101 Query 142 APPEPGAGR--RRGHLRVLPDP 161 APP R RRGHLRVLPDP Sbjct 102 APPPQRTTRTGRRGHLRVLPDP 123 >gi|312140687|ref|YP_004008023.1| hypothetical protein REQ_33480 [Rhodococcus equi 103S] gi|311890026|emb|CBH49344.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=132 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/143 (60%), Positives = 94/143 (66%), Gaps = 16/143 (11%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 RRCCRPGC + AVATLT+VYSDSTAV+GPLAT EPHSWDLC HA RITAP+GWELVR+ Sbjct 5 RRCCRPGCKNPAVATLTYVYSDSTAVVGPLATVAEPHSWDLCETHASRITAPKGWELVRY 64 Query 82 AGPLPSH-PDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGV 140 G S PDEDDL ALA+AVRE G R G P + +GA Sbjct 65 EGGFSSSTPDEDDLTALAEAVREAGLGERPRTDDGS-----------PESRSGASVPS-- 111 Query 141 LAPPEPGAGRRRGHLRVLPDPAD 163 APP G RRGHLRVLPDPA+ Sbjct 112 -APPTVRTG-RRGHLRVLPDPAN 132 >gi|226305643|ref|YP_002765603.1| hypothetical protein RER_21560 [Rhodococcus erythropolis PR4] gi|226184760|dbj|BAH32864.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=144 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/144 (60%), Positives = 96/144 (67%), Gaps = 22/144 (15%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 RRCCRPGC + AVATLT+VYSDSTAV+GPLAT EPHSWDLC H RITAP+GWELVRH Sbjct 21 RRCCRPGCKNPAVATLTYVYSDSTAVVGPLATVAEPHSWDLCDTHGSRITAPKGWELVRH 80 Query 82 AGPLPSH-PDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDF-PAAATGAPTGGG 139 G S PDEDDL ALA+AVRE G G R N + + +D PAA + A TG Sbjct 81 EGGFASSTPDEDDLTALAEAVREAG--LGDR-----NKSNVDADEDIRPAAPSTARTG-- 131 Query 140 VLAPPEPGAGRRRGHLRVLPDPAD 163 RRGHLRVLPDP++ Sbjct 132 -----------RRGHLRVLPDPSN 144 >gi|229489531|ref|ZP_04383394.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229323628|gb|EEN89386.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=169 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 84/143 (59%), Positives = 93/143 (66%), Gaps = 20/143 (13%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 RRCCRPGC + AVATLT+VYSDSTAV+GPLAT EPHSWDLC H RITAP+GWELVRH Sbjct 46 RRCCRPGCKNPAVATLTYVYSDSTAVVGPLATVAEPHSWDLCDTHGSRITAPKGWELVRH 105 Query 82 AGPLPSH-PDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGV 140 G S PDEDDL ALA+AVRE G G R + D PAA + A TG Sbjct 106 EGGFASSTPDEDDLTALAEAVREAG--LGDRSKSNVDADE----DIRPAAPSTARTG--- 156 Query 141 LAPPEPGAGRRRGHLRVLPDPAD 163 RRGHLRVLPDP++ Sbjct 157 ----------RRGHLRVLPDPSN 169 >gi|169630684|ref|YP_001704333.1| hypothetical protein MAB_3604c [Mycobacterium abscessus ATCC 19977] gi|169242651|emb|CAM63679.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=121 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 80/131 (62%), Positives = 91/131 (70%), Gaps = 11/131 (8%) Query 34 VATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRHAGPLPSHPDEDD 93 +ATLTFVY+DSTAV+GPLAT+ EPHSWDLC HA RITAPRGWELVR+ GPLPS+P++DD Sbjct 1 MATLTFVYADSTAVVGPLATSSEPHSWDLCAQHASRITAPRGWELVRYNGPLPSNPEDDD 60 Query 94 LVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGVLAPPEPG-AGRRR 152 LVALADAVRE GG GF + PA AP P P GRRR Sbjct 61 LVALADAVRETT---------GGVRVAAAGFSE-PALDVSAPAPNVAPRPVHPAPVGRRR 110 Query 153 GHLRVLPDPAD 163 GHLRVLPDP++ Sbjct 111 GHLRVLPDPSE 121 >gi|111023278|ref|YP_706250.1| hypothetical protein RHA1_ro06315 [Rhodococcus jostii RHA1] gi|110822808|gb|ABG98092.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=162 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 84/151 (56%), Positives = 95/151 (63%), Gaps = 18/151 (11%) Query 14 SLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAP 73 SL+V ++ RRCCRPGC + AVATLT+VYSDSTAV+GPLAT EPHSWDLC HA RITAP Sbjct 29 SLAVRSL-RRCCRPGCKNPAVATLTYVYSDSTAVVGPLATVDEPHSWDLCETHASRITAP 87 Query 74 RGWELVRHAGPLPSH-PDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAAT 132 +GWELVR+ G S PDEDDL ALA+AVRE G G A T Sbjct 88 KGWELVRYEGGFSSSTPDEDDLTALAEAVREAG--------LGDRWRSERTVSTEDRAET 139 Query 133 GAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD 163 G P P RRGHLRVLPDP++ Sbjct 140 G--------TQPGPARTGRRGHLRVLPDPSN 162 >gi|317506112|ref|ZP_07963937.1| hypothetical protein HMPREF9336_00306 [Segniliparus rugosus ATCC BAA-974] gi|316255611|gb|EFV14856.1| hypothetical protein HMPREF9336_00306 [Segniliparus rugosus ATCC BAA-974] Length=121 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 72/147 (49%), Positives = 88/147 (60%), Gaps = 29/147 (19%) Query 18 VNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWE 77 + +PRRC RPGC AVATLT+VY++STAV+GPLAT EPH+WDLC HA RITAP+GW Sbjct 1 MRIPRRCSRPGCKMPAVATLTYVYAESTAVVGPLATNAEPHAWDLCEIHAQRITAPKGWA 60 Query 78 LVRHAGPL-PSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPT 136 ++R G P H ++DDL ALA+AVRE G R+ P Sbjct 61 MMRCEGSFTPVHAEDDDLTALAEAVREAG-RGERKSRP---------------------- 97 Query 137 GGGVLAPPEPGAGRRRGHLRVLPDPAD 163 APP + RRGHLRV+PDP D Sbjct 98 -----APPAASSTGRRGHLRVVPDPVD 119 >gi|296393058|ref|YP_003657942.1| hypothetical protein Srot_0629 [Segniliparus rotundus DSM 44985] gi|296180205|gb|ADG97111.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=128 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 75/147 (52%), Positives = 89/147 (61%), Gaps = 27/147 (18%) Query 18 VNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWE 77 + +PRRC RPGC AVATLT+VY++STAV+GPLAT EPH+WDLC HA RITAP+GW Sbjct 1 MRIPRRCSRPGCKMPAVATLTYVYAESTAVVGPLATNAEPHAWDLCEIHAQRITAPKGWA 60 Query 78 LVRHAGPL-PSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPT 136 ++R G P H ++DDL ALA+AVRE AGR G PA A T Sbjct 61 MMRCEGSFTPVHAEDDDLTALAEAVRE----AGRGERKGAR---------LPAVAGAGAT 107 Query 137 GGGVLAPPEPGAGRRRGHLRVLPDPAD 163 G RRGHLRV+PD AD Sbjct 108 G-------------RRGHLRVVPDLAD 121 >gi|319948498|ref|ZP_08022631.1| hypothetical protein ES5_03971 [Dietzia cinnamea P4] gi|319437835|gb|EFV92822.1| hypothetical protein ES5_03971 [Dietzia cinnamea P4] Length=168 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 80/147 (55%), Positives = 90/147 (62%), Gaps = 15/147 (10%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 RRCCRPGCP+ AVATLT+VY+DSTAVIGPL +EPH+WDLC HA RITAPRGW+LVRH Sbjct 5 RRCCRPGCPNRAVATLTYVYADSTAVIGPLPAVQEPHAWDLCAVHALRITAPRGWDLVRH 64 Query 82 AGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPL--------HGFDDFPAAATG 133 L + ++ DL AL DAV GGP GRR GA L G D A Sbjct 65 PD-LDTSAEDSDLTALLDAV-TGGPVGGRR-----TGAALVDADRLRRLGVSDPEPALDR 117 Query 134 APTGGGVLAPPEPGAGRRRGHLRVLPD 160 A G L P P G R HLRV+PD Sbjct 118 ALAGSDPLPAPGPSTGSGRPHLRVVPD 144 >gi|296138913|ref|YP_003646156.1| hypothetical protein Tpau_1186 [Tsukamurella paurometabola DSM 20162] gi|296027047|gb|ADG77817.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=180 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 85/177 (49%), Positives = 101/177 (58%), Gaps = 35/177 (19%) Query 14 SLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAP 73 +L +VN R+CCRPGC ++AVATLTF Y S AV+GPL T EPHSWDLC HA R+TAP Sbjct 12 NLLLVNPVRQCCRPGCRNHAVATLTFDYRQSIAVLGPLGTTSEPHSWDLCDFHASRMTAP 71 Query 74 RGWELVRHAGPLPSHPD--------EDDLVALADAVREGGPSAGRRHH-------PGGN- 117 RGWE++R+ LP++ +DDL ALAD VREG P R PGG+ Sbjct 72 RGWEMLRN---LPAYSAASVGGAALDDDLTALADTVREGAPGLARERGPRPVVDVPGGDV 128 Query 118 --------GA--PLH-GFDDFPAAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD 163 GA P+H G P A G + G PG RRGHLRVLPDP D Sbjct 129 PARSLPPIGAMRPVHDGMSQVPPAGQG--SAGAPKHAARPG---RRGHLRVLPDPVD 180 >gi|213964882|ref|ZP_03393081.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213952418|gb|EEB63801.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length=135 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 73/147 (50%), Positives = 88/147 (60%), Gaps = 16/147 (10%) Query 18 VNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWE 77 ++V RRCCRPGC AVATLT+ Y++STAV+GPLA A EPHSWDLC HA ITAP GWE Sbjct 1 MSVFRRCCRPGCGKPAVATLTYAYAESTAVVGPLAAASEPHSWDLCEKHARSITAPLGWE 60 Query 78 LVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTG 137 LVR+ P P+ D+DDL ALA+AVRE G +A G L D P Sbjct 61 LVRYDVPTPAQ-DDDDLTALAEAVREAGRNA--------TGLVLRDEVD------NRPQT 105 Query 138 GGVLAPPEPGAGRR-RGHLRVLPDPAD 163 + + P + RGHL V+ DP D Sbjct 106 YKIDSSRHPSTRKSARGHLHVVRDPED 132 >gi|331698953|ref|YP_004335192.1| hypothetical protein Psed_5202 [Pseudonocardia dioxanivorans CB1190] gi|326953642|gb|AEA27339.1| hypothetical protein Psed_5202 [Pseudonocardia dioxanivorans CB1190] Length=120 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/139 (54%), Positives = 81/139 (59%), Gaps = 28/139 (20%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 RRC R GC AVATLT+VY+DSTAV+GPLAT EPHS+DLC HA R+TAPRGWE+VR Sbjct 5 RRCSRTGCTELAVATLTYVYADSTAVVGPLATQAEPHSYDLCTAHAHRLTAPRGWEVVRF 64 Query 82 AGPL-PSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGV 140 G P P DDL ALA+AVRE G A R PL PA TG Sbjct 65 EGEFAPPQPSADDLTALAEAVREAG-RADR---------PLDPPPSVPAQGTG------- 107 Query 141 LAPPEPGAGRRRGHLRVLP 159 RRGHLRVLP Sbjct 108 ----------RRGHLRVLP 116 >gi|256380316|ref|YP_003103976.1| hypothetical protein Amir_6328 [Actinosynnema mirum DSM 43827] gi|255924619|gb|ACU40130.1| hypothetical protein Amir_6328 [Actinosynnema mirum DSM 43827] Length=116 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/144 (51%), Positives = 84/144 (59%), Gaps = 32/144 (22%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 RRC R GC + AVATLT+ Y+DSTAV+GPLAT+ EPHS+DLC HA R+TAPRGWE+VR+ Sbjct 2 RRCSRTGCANPAVATLTYAYADSTAVVGPLATSSEPHSYDLCEEHALRLTAPRGWEVVRY 61 Query 82 AGPL-PSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGV 140 G P P DDL ALA+AVRE G D P Sbjct 62 QGEFAPPEPTVDDLTALAEAVREAG-----------------RVDRSP------------ 92 Query 141 LAPPE-PGAGRRRGHLRVLPDPAD 163 PPE P RRGHLRVLPDP + Sbjct 93 -QPPEVPLGTIRRGHLRVLPDPRE 115 >gi|325675683|ref|ZP_08155367.1| hypothetical protein HMPREF0724_13149 [Rhodococcus equi ATCC 33707] gi|325553654|gb|EGD23332.1| hypothetical protein HMPREF0724_13149 [Rhodococcus equi ATCC 33707] Length=113 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/128 (57%), Positives = 81/128 (64%), Gaps = 16/128 (12%) Query 37 LTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRHAGPLPSH-PDEDDLV 95 +T+VYSDSTAV+GPLAT EPHSWDLC HA RITAP+GWELVR+ G S PDEDDL Sbjct 1 MTYVYSDSTAVVGPLATVAEPHSWDLCETHASRITAPKGWELVRYEGGFSSSTPDEDDLT 60 Query 96 ALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGVLAPPEPGAGRRRGHL 155 ALA+AVRE G R G P + +GA APP G RRGHL Sbjct 61 ALAEAVREAGLGERPRTDDGS-----------PESRSGASVPS---APPTVRTG-RRGHL 105 Query 156 RVLPDPAD 163 RVLPDPA+ Sbjct 106 RVLPDPAN 113 >gi|284992678|ref|YP_003411232.1| hypothetical protein Gobs_4299 [Geodermatophilus obscurus DSM 43160] gi|284065923|gb|ADB76861.1| conserved hypothetical protein [Geodermatophilus obscurus DSM 43160] Length=117 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/145 (50%), Positives = 84/145 (58%), Gaps = 31/145 (21%) Query 17 VVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGW 76 +V RRC R GC A ATLT+VY++STAV+GPLAT EPHS+DLC HAGR+T PRGW Sbjct 1 MVRQSRRCSRSGCAQPAAATLTYVYAESTAVVGPLATFSEPHSYDLCEFHAGRLTVPRGW 60 Query 77 ELVRHAGPLP-SHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAP 135 E+VRH + S P DDL+ALADAVRE R P N Sbjct 61 EVVRHEIDVEDSGPTGDDLLALADAVREAA-----RPEPPRN------------------ 97 Query 136 TGGGVLAPPEPGAGRRRGHLRVLPD 160 P + G+G RRGHLRVLPD Sbjct 98 -------PADDGSGTRRGHLRVLPD 115 >gi|257057073|ref|YP_003134905.1| hypothetical protein Svir_31030 [Saccharomonospora viridis DSM 43017] gi|256586945|gb|ACU98078.1| hypothetical protein Svir_31030 [Saccharomonospora viridis DSM 43017] Length=122 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/140 (52%), Positives = 85/140 (61%), Gaps = 27/140 (19%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 R+C R GC AVATLT+ YSDSTAV+GPLATA EPHS+DLC HA R+TAP+GWE+VRH Sbjct 5 RKCSRTGCLEPAVATLTYAYSDSTAVVGPLATASEPHSYDLCEAHALRLTAPKGWEVVRH 64 Query 82 AGPLPS-HPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGV 140 G P D+L ALA+AVRE G R+ D PA + P Sbjct 65 EGEFAVPEPSSDELTALAEAVREAG-----RY-------------DRPAPQSSEP----- 101 Query 141 LAPPEPGAGR-RRGHLRVLP 159 P +P G+ RRGHLRVLP Sbjct 102 --PEQPRRGQGRRGHLRVLP 119 >gi|325000743|ref|ZP_08121855.1| hypothetical protein PseP1_18337 [Pseudonocardia sp. P1] Length=117 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 74/144 (52%), Positives = 80/144 (56%), Gaps = 32/144 (22%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 RRC R GC AVATLT+VY+DSTAV+GPLAT EPHS+DLC GHA +TAPRGWE+VR Sbjct 2 RRCSRTGCTELAVATLTYVYADSTAVVGPLATQAEPHSYDLCTGHAHNLTAPRGWEVVRF 61 Query 82 AGPL--PSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGG 139 G P H E DL ALADAVRE AGR P Sbjct 62 EGEFAPPQHTGE-DLTALADAVRE----AGRLDRP------------------------- 91 Query 140 VLAPPEPGAGRRRGHLRVLPDPAD 163 V PG RRGHLR LP P D Sbjct 92 VEVVARPGGTGRRGHLRALPTPGD 115 >gi|116669757|ref|YP_830690.1| hypothetical protein Arth_1196 [Arthrobacter sp. FB24] gi|116609866|gb|ABK02590.1| conserved hypothetical protein [Arthrobacter sp. FB24] Length=129 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/144 (49%), Positives = 87/144 (61%), Gaps = 22/144 (15%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 R+C R C + AVATLT+VY+DSTAV+GPLAT EPH +DLC HAG +T PRGWE++R Sbjct 5 RQCSRSACRNSAVATLTYVYADSTAVLGPLATYAEPHCYDLCEQHAGSLTVPRGWEVLRL 64 Query 82 AGP-LPSHPDEDDLVALADAVREGG--PSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGG 138 A P P P DDL+ALA+AVRE PS+ G+ AP G + Sbjct 65 AMPATPPQPGPDDLLALANAVREAALRPSS-------GDSAP------------GQRSAH 105 Query 139 GVLAPPEPGAGRRRGHLRVLPDPA 162 L P P G RRGHLR+L +P+ Sbjct 106 AALEAPPPAEGARRGHLRILREPS 129 >gi|117927672|ref|YP_872223.1| hypothetical protein Acel_0463 [Acidothermus cellulolyticus 11B] gi|117648135|gb|ABK52237.1| conserved hypothetical protein [Acidothermus cellulolyticus 11B] Length=117 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/140 (50%), Positives = 80/140 (58%), Gaps = 29/140 (20%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 RRCCR C AVATLT+VY+DSTAV+GPLAT EPHS+DLC H+ R+TAP GWE++R Sbjct 5 RRCCRAACGQPAVATLTYVYADSTAVLGPLATYAEPHSYDLCSKHSARLTAPLGWEIIRL 64 Query 82 AGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGVL 141 P P DDLVALADA+RE G P G G DD + + G Sbjct 65 EISEPPAPGPDDLVALADAIREAG------RQPAG------GVDDDQSRSQG-------- 104 Query 142 APPEPGAGRRRGHLRVLPDP 161 RRGHLRVL P Sbjct 105 ---------RRGHLRVLRSP 115 >gi|302534802|ref|ZP_07287144.1| conserved hypothetical protein [Streptomyces sp. C] gi|302443697|gb|EFL15513.1| conserved hypothetical protein [Streptomyces sp. C] Length=154 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/147 (50%), Positives = 86/147 (59%), Gaps = 24/147 (16%) Query 16 SVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRG 75 +VV++ RRC R C AVATLT+VY+DSTAV+GPLAT EPH +DLC H+ R+TAPRG Sbjct 29 NVVSLVRRCSRTACGRPAVATLTYVYADSTAVLGPLATYAEPHCYDLCAEHSERLTAPRG 88 Query 76 WELVRHA-GPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGA 134 WE+VR + G PS P DDL ALA+AVRE R GG+G GA Sbjct 89 WEVVRLSDGSGPSRPSGDDLEALANAVREAARPPERAAEAGGSG-------------PGA 135 Query 135 PTGGGVLAPPEPGAGRRRGHLRVLPDP 161 P G RRGHLRVL P Sbjct 136 PVAGET----------RRGHLRVLRSP 152 >gi|145593507|ref|YP_001157804.1| hypothetical protein Strop_0949 [Salinispora tropica CNB-440] gi|145302844|gb|ABP53426.1| hypothetical protein Strop_0949 [Salinispora tropica CNB-440] Length=135 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/145 (51%), Positives = 87/145 (60%), Gaps = 24/145 (16%) Query 16 SVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRG 75 + V PRRC R GCP AVATLT+VY++STAV+GPLA EPH++DLC HA +TAPRG Sbjct 11 AAVRSPRRCTRNGCPRQAVATLTYVYNESTAVVGPLAAFAEPHTYDLCEPHARSLTAPRG 70 Query 76 WELVRHAGPL-PSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGA 134 W++VRH G P P DDLVALA+AVRE P P G D PA +T + Sbjct 71 WDVVRHEGEFEPPPPTTDDLVALAEAVREAA-------RPVAPRPPEDGHD--PATSTSS 121 Query 135 PTGGGVLAPPEPGAGRRRGHLRVLP 159 TG RRGHLRV+P Sbjct 122 -TG-------------RRGHLRVIP 132 >gi|302530044|ref|ZP_07282386.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302438939|gb|EFL10755.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=132 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/148 (48%), Positives = 82/148 (56%), Gaps = 32/148 (21%) Query 14 SLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAP 73 S +V R+C R GC AVATLT+ Y DSTAV+GPLATA EPHS+DLC HA R+T P Sbjct 12 SFRIVRSVRKCSRTGCLEPAVATLTYAYQDSTAVVGPLATASEPHSYDLCEAHALRLTVP 71 Query 74 RGWELVRHAGPLPS-HPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAAT 132 +GWE+VRH G + D+L ALA+AVRE G S D P A Sbjct 72 KGWEVVRHEGAFAAPEQSADELTALAEAVREAGRS------------------DVPPAQ- 112 Query 133 GAPTGGGVLAPPEP-GAGRRRGHLRVLP 159 PEP G RRGHLRVLP Sbjct 113 -----------PEPEGPSGRRGHLRVLP 129 >gi|25027317|ref|NP_737371.1| hypothetical protein CE0761 [Corynebacterium efficiens YS-314] gi|259506545|ref|ZP_05749447.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23492598|dbj|BAC17571.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165965|gb|EEW50519.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=151 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/163 (46%), Positives = 92/163 (57%), Gaps = 19/163 (11%) Query 1 MRVSGASAALVHDSLSVVNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSW 60 M + ++ L D +SV RRC RPGC AVATLT+ YS+STAV+GPLA A EPHSW Sbjct 1 MTIQTSTKGL--DFVSVSQF-RRCSRPGCGKPAVATLTYAYSESTAVVGPLAPAAEPHSW 57 Query 61 DLCVGHAGRITAPRGWELVRHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAP 120 DLC HA RITAP GWE++R P D++DL ALA+AVRE G R+ G + Sbjct 58 DLCEHHAERITAPLGWEMLRVNDIFPE--DDEDLTALAEAVREAG-----RNASGLVSSE 110 Query 121 LHGFDDFPAAATGAPTGGGVLAPPEPGAGRRRGHLRVLPDPAD 163 ++ P + A RRGHL V+PDP D Sbjct 111 EEVGENHPVNRS---------ARRAEYRAHRRGHLYVVPDPED 144 >gi|325962631|ref|YP_004240537.1| hypothetical protein Asphe3_12240 [Arthrobacter phenanthrenivorans Sphe3] gi|323468718|gb|ADX72403.1| hypothetical protein Asphe3_12240 [Arthrobacter phenanthrenivorans Sphe3] Length=128 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 67/142 (48%), Positives = 82/142 (58%), Gaps = 19/142 (13%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 R+C R C AVATLT+VY+DSTAV+GPLAT EPH +DLC HA +T PRGWE++R Sbjct 5 RQCSRSACRQSAVATLTYVYADSTAVLGPLATYAEPHCYDLCEQHADSLTVPRGWEVLRL 64 Query 82 AGP-LPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGV 140 A P P P DDL+ALA+AVR+ + P G P +A AP G Sbjct 65 AMPSTPQQPGPDDLLALANAVRDAAALPAQPQQPAQRG---------PHSALEAPAG--- 112 Query 141 LAPPEPGAGRRRGHLRVLPDPA 162 G RRGHLRVL +P+ Sbjct 113 ------TEGTRRGHLRVLREPS 128 >gi|159036546|ref|YP_001535799.1| hypothetical protein Sare_0891 [Salinispora arenicola CNS-205] gi|157915381|gb|ABV96808.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length=123 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 70/143 (49%), Positives = 83/143 (59%), Gaps = 24/143 (16%) Query 18 VNVPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWE 77 + PRRC R GCP AVATLT+VY++STAV+GPLA EPH++DLC HA +TAPRGW+ Sbjct 1 MRSPRRCTRNGCPRQAVATLTYVYNESTAVVGPLAAFAEPHTYDLCEPHARSLTAPRGWD 60 Query 78 LVRHAGPL-PSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPT 136 +VRH G P P DDLVALA+AVRE P P D AT P+ Sbjct 61 VVRHEGEFEPPPPTTDDLVALAEAVREAA-------RPAVPRPPEDDHD----PATSTPS 109 Query 137 GGGVLAPPEPGAGRRRGHLRVLP 159 G RRGHLRV+P Sbjct 110 TG------------RRGHLRVIP 120 >gi|336119564|ref|YP_004574341.1| hypothetical protein MLP_39240 [Microlunatus phosphovorus NM-1] gi|334687353|dbj|BAK36938.1| hypothetical protein MLP_39240 [Microlunatus phosphovorus NM-1] Length=128 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 72/142 (51%), Positives = 84/142 (60%), Gaps = 18/142 (12%) Query 20 VPRRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELV 79 V RRC R GCP AVATLT+VYSDSTAV+GPLA EPH +DLC HA + APRGWE++ Sbjct 2 VSRRCSRAGCPGAAVATLTYVYSDSTAVLGPLAARNEPHGYDLCHTHAENLRAPRGWEVI 61 Query 80 RHAGPLPSHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGG 139 R P P DDL+ALA+AVRE G S + P+H D PA G Sbjct 62 RKEIPTEPEPSSDDLLALANAVREVGFSYDQ---------PVH---DRPAEVRPREQRPG 109 Query 140 VLAPPEPGAGRRRGHLRVLPDP 161 ++ E G RRGHL VL DP Sbjct 110 IV---ELG---RRGHLTVLADP 125 >gi|296130181|ref|YP_003637431.1| hypothetical protein Cfla_2342 [Cellulomonas flavigena DSM 20109] gi|296021996|gb|ADG75232.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109] Length=129 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 73/139 (53%), Positives = 84/139 (61%), Gaps = 23/139 (16%) Query 22 RRCCRPGCPHYAVATLTFVYSDSTAVIGPLATAREPHSWDLCVGHAGRITAPRGWELVRH 81 R+C R CPH AVATLT+VY+DSTAV+GPLA EPHS+DLCV HA R+TAPRGWE+VR Sbjct 5 RQCSRTACPHAAVATLTYVYADSTAVLGPLAQLAEPHSYDLCVEHADRLTAPRGWEVVRL 64 Query 82 AGPLP-SHPDEDDLVALADAVREGGPSAGRRHHPGGNGAPLHGFDDFPAAATGAPTGGGV 140 L + P DDLVALA+AVRE AGRR Sbjct 65 LPDLQAAAPSHDDLVALAEAVRE----AGRRR------------------VPEPAPALAP 102 Query 141 LAPPEPGAGRRRGHLRVLP 159 +APP P RRRGHLRV+P Sbjct 103 VAPPAPDTSRRRGHLRVVP 121 Lambda K H 0.319 0.139 0.455 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129924364284 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40