BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3259
Length=139
Score E
Sequences producing significant alignments: (Bits) Value
gi|15842848|ref|NP_337885.1| hypothetical protein MT3357 [Mycoba... 271 2e-71
gi|289555537|ref|ZP_06444747.1| conserved hypothetical protein [... 271 2e-71
gi|15610395|ref|NP_217776.1| hypothetical protein Rv3259 [Mycoba... 269 8e-71
gi|342861462|ref|ZP_08718109.1| hypothetical protein MCOL_21356 ... 253 1e-65
gi|118465767|ref|YP_883363.1| hypothetical protein MAV_4222 [Myc... 252 1e-65
gi|296168946|ref|ZP_06850615.1| conserved hypothetical protein [... 251 3e-65
gi|41409469|ref|NP_962305.1| hypothetical protein MAP3371 [Mycob... 251 3e-65
gi|108798297|ref|YP_638494.1| hypothetical protein Mmcs_1326 [My... 250 6e-65
gi|126433964|ref|YP_001069655.1| hypothetical protein Mjls_1362 ... 249 9e-65
gi|254776658|ref|ZP_05218174.1| hypothetical protein MaviaA2_185... 248 2e-64
gi|15827327|ref|NP_301590.1| hypothetical protein ML0761 [Mycoba... 248 2e-64
gi|183981305|ref|YP_001849596.1| hypothetical protein MMAR_1283 ... 246 7e-64
gi|118618074|ref|YP_906406.1| hypothetical protein MUL_2604 [Myc... 244 4e-63
gi|240172511|ref|ZP_04751170.1| hypothetical protein MkanA1_2456... 243 7e-63
gi|254821369|ref|ZP_05226370.1| hypothetical protein MintA_15637... 242 1e-62
gi|333991648|ref|YP_004524262.1| hypothetical protein JDM601_300... 234 2e-60
gi|118473439|ref|YP_886202.1| hypothetical protein MSMEG_1832 [M... 234 3e-60
gi|145225306|ref|YP_001135984.1| hypothetical protein Mflv_4728 ... 228 2e-58
gi|120402735|ref|YP_952564.1| hypothetical protein Mvan_1735 [My... 224 3e-57
gi|169630685|ref|YP_001704334.1| hypothetical protein MAB_3605 [... 207 5e-52
gi|226305642|ref|YP_002765602.1| hypothetical protein RER_21550 ... 193 6e-48
gi|325675682|ref|ZP_08155366.1| hypothetical protein HMPREF0724_... 185 2e-45
gi|312140688|ref|YP_004008024.1| hypothetical protein REQ_33490 ... 185 2e-45
gi|226365785|ref|YP_002783568.1| hypothetical protein ROP_63760 ... 177 3e-43
gi|54026596|ref|YP_120838.1| hypothetical protein nfa46230 [Noca... 174 5e-42
gi|111023277|ref|YP_706249.1| hypothetical protein RHA1_ro06314 ... 173 7e-42
gi|333921462|ref|YP_004495043.1| hypothetical protein AS9A_3805 ... 169 1e-40
gi|262203189|ref|YP_003274397.1| hypothetical protein Gbro_3300 ... 163 6e-39
gi|296393057|ref|YP_003657941.1| hypothetical protein Srot_0628 ... 160 8e-38
gi|317506111|ref|ZP_07963936.1| hypothetical protein HMPREF9336_... 158 3e-37
gi|343926916|ref|ZP_08766409.1| hypothetical protein GOALK_072_0... 150 8e-35
gi|237786083|ref|YP_002906788.1| hypothetical protein ckrop_1516... 143 1e-32
gi|296138912|ref|YP_003646155.1| hypothetical protein Tpau_1185 ... 142 1e-32
gi|326381470|ref|ZP_08203164.1| hypothetical protein SCNU_00925 ... 141 3e-32
gi|227832489|ref|YP_002834196.1| hypothetical protein cauri_0661... 139 1e-31
gi|296118791|ref|ZP_06837367.1| conserved hypothetical protein [... 138 3e-31
gi|227505497|ref|ZP_03935546.1| conserved hypothetical protein [... 135 2e-30
gi|255323837|ref|ZP_05364963.1| conserved hypothetical protein [... 134 3e-30
gi|325000744|ref|ZP_08121856.1| hypothetical protein PseP1_18342... 134 4e-30
gi|340531500|gb|AEK46705.1| hypothetical protein RAM_41190 [Amyc... 134 4e-30
gi|300857925|ref|YP_003782908.1| hypothetical protein cpfrc_0050... 133 7e-30
gi|257057074|ref|YP_003134906.1| hypothetical protein Svir_31040... 133 1e-29
gi|213964775|ref|ZP_03392974.1| conserved hypothetical protein [... 133 1e-29
gi|337290178|ref|YP_004629199.1| hypothetical protein CULC22_005... 132 2e-29
gi|331698954|ref|YP_004335193.1| hypothetical protein Psed_5203 ... 130 6e-29
gi|302530045|ref|ZP_07282387.1| conserved hypothetical protein [... 130 9e-29
gi|62389633|ref|YP_225035.1| hypothetical protein cg0852 [Coryne... 129 1e-28
gi|38233292|ref|NP_939059.1| hypothetical protein DIP0685 [Coryn... 128 3e-28
gi|134102895|ref|YP_001108556.1| hypothetical protein SACE_6462 ... 125 1e-27
gi|172040154|ref|YP_001799867.1| hypothetical protein cur_0473 [... 125 2e-27
>gi|15842848|ref|NP_337885.1| hypothetical protein MT3357 [Mycobacterium tuberculosis CDC1551]
gi|148824461|ref|YP_001289215.1| hypothetical protein TBFG_13288 [Mycobacterium tuberculosis F11]
gi|253800301|ref|YP_003033302.1| hypothetical protein TBMG_03307 [Mycobacterium tuberculosis KZN
1435]
37 more sequence titles
Length=175
Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/139 (100%), Positives = 139/139 (100%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV
Sbjct 37 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 96
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA
Sbjct 97 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 156
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVAIYLDVDPSVIDPTIDD
Sbjct 157 QVAIYLDVDPSVIDPTIDD 175
>gi|289555537|ref|ZP_06444747.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|289440169|gb|EFD22662.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
Length=167
Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/139 (100%), Positives = 139/139 (100%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV
Sbjct 29 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 88
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA
Sbjct 89 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 148
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVAIYLDVDPSVIDPTIDD
Sbjct 149 QVAIYLDVDPSVIDPTIDD 167
>gi|15610395|ref|NP_217776.1| hypothetical protein Rv3259 [Mycobacterium tuberculosis H37Rv]
gi|31794439|ref|NP_856932.1| hypothetical protein Mb3287 [Mycobacterium bovis AF2122/97]
gi|121639148|ref|YP_979372.1| hypothetical protein BCG_3288 [Mycobacterium bovis BCG str. Pasteur
1173P2]
38 more sequence titles
Length=139
Score = 269 bits (688), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 139/139 (100%), Positives = 139/139 (100%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV
Sbjct 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA
Sbjct 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVAIYLDVDPSVIDPTIDD
Sbjct 121 QVAIYLDVDPSVIDPTIDD 139
>gi|342861462|ref|ZP_08718109.1| hypothetical protein MCOL_21356 [Mycobacterium colombiense CECT
3035]
gi|342130951|gb|EGT84240.1| hypothetical protein MCOL_21356 [Mycobacterium colombiense CECT
3035]
Length=140
Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/139 (92%), Positives = 136/139 (98%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIER WQ+R+++LD+AVDEIPRI+AKDPESV
Sbjct 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERSWQDRLAELDVAVDEIPRISAKDPESV 60
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEVIADGPI LARLIPAGVD+RGNATRARIVLFRKPIERRAKDT ELG+LLHEILVA
Sbjct 61 QWPPEVIADGPIPLARLIPAGVDIRGNATRARIVLFRKPIERRAKDTVELGDLLHEILVA 120
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVAIYLDV+PSVIDPTIDD
Sbjct 121 QVAIYLDVEPSVIDPTIDD 139
>gi|118465767|ref|YP_883363.1| hypothetical protein MAV_4222 [Mycobacterium avium 104]
gi|118167054|gb|ABK67951.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=197
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/139 (92%), Positives = 135/139 (98%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIER WQ+R++ LD+AVDEIPRI+AKDP+SV
Sbjct 58 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERDWQDRLADLDVAVDEIPRISAKDPDSV 117
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEVIADGPI LARLIPAGVD+RGNATRARIVLFRKPIERRAKDT ELGELLHEILVA
Sbjct 118 QWPPEVIADGPIPLARLIPAGVDIRGNATRARIVLFRKPIERRAKDTVELGELLHEILVA 177
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVAIYLDV+PSVIDPTIDD
Sbjct 178 QVAIYLDVEPSVIDPTIDD 196
>gi|296168946|ref|ZP_06850615.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896415|gb|EFG76068.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=140
Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/139 (93%), Positives = 134/139 (97%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIER WQ R++ LD+AVDEIPRIAAKDP+SV
Sbjct 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERHWQARLADLDVAVDEIPRIAAKDPDSV 60
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEVIADGPI LARLIPAGVDVRGNATRARIVLFRKPIERRAKDT ELG+LLHEILVA
Sbjct 61 QWPPEVIADGPIPLARLIPAGVDVRGNATRARIVLFRKPIERRAKDTVELGDLLHEILVA 120
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVAIYLDV+PSVIDPTIDD
Sbjct 121 QVAIYLDVEPSVIDPTIDD 139
>gi|41409469|ref|NP_962305.1| hypothetical protein MAP3371 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398300|gb|AAS05921.1| hypothetical protein MAP_3371 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459665|gb|EGO38600.1| hypothetical protein MAPs_01870 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=140
Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 127/139 (92%), Positives = 135/139 (98%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIER WQ+R++ LD+AVDEIPRI+AKDP+SV
Sbjct 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERDWQDRLADLDVAVDEIPRISAKDPDSV 60
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEVIADGPI LARLIPAGVD+RGNATRARIVLFRKPIERRAKDT ELGELLHEILVA
Sbjct 61 QWPPEVIADGPIPLARLIPAGVDIRGNATRARIVLFRKPIERRAKDTVELGELLHEILVA 120
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVAIYLDV+PSVIDPTIDD
Sbjct 121 QVAIYLDVEPSVIDPTIDD 139
>gi|108798297|ref|YP_638494.1| hypothetical protein Mmcs_1326 [Mycobacterium sp. MCS]
gi|119867393|ref|YP_937345.1| hypothetical protein Mkms_1343 [Mycobacterium sp. KMS]
gi|108768716|gb|ABG07438.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693482|gb|ABL90555.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=156
Score = 250 bits (638), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 124/139 (90%), Positives = 134/139 (97%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQ+RVS LD+AVDEIPR+A KDPESV
Sbjct 17 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQDRVSGLDVAVDEIPRMAPKDPESV 76
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEV+ADGP+ALARLIPAGVDVRGN+TRARIVLFRKPIERRAKD++EL ELLHE+LVA
Sbjct 77 QWPPEVVADGPVALARLIPAGVDVRGNSTRARIVLFRKPIERRAKDSDELAELLHEVLVA 136
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVA YL V+PSVIDPTIDD
Sbjct 137 QVATYLGVEPSVIDPTIDD 155
>gi|126433964|ref|YP_001069655.1| hypothetical protein Mjls_1362 [Mycobacterium sp. JLS]
gi|126233764|gb|ABN97164.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=140
Score = 249 bits (636), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/139 (90%), Positives = 134/139 (97%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQ+RVS LD+AVDEIPR+A KDPESV
Sbjct 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQDRVSGLDVAVDEIPRMAPKDPESV 60
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEV+ADGP+ALARLIPAGVDVRGN+TRARIVLFRKPIERRAKD++EL ELLHE+LVA
Sbjct 61 QWPPEVVADGPVALARLIPAGVDVRGNSTRARIVLFRKPIERRAKDSDELAELLHEVLVA 120
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVA YL V+PSVIDPTIDD
Sbjct 121 QVATYLGVEPSVIDPTIDD 139
>gi|254776658|ref|ZP_05218174.1| hypothetical protein MaviaA2_18596 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=140
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/139 (91%), Positives = 134/139 (97%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIER WQ+R++ LD+AVDEIPRI+AKDP+SV
Sbjct 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERDWQDRLADLDVAVDEIPRISAKDPDSV 60
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWP EVIADGPI LARLIPAGVD+RGNATRARIVLFRKPIERRAKDT ELGELLHEILVA
Sbjct 61 QWPTEVIADGPIPLARLIPAGVDIRGNATRARIVLFRKPIERRAKDTVELGELLHEILVA 120
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVAIYLDV+PSVIDPTIDD
Sbjct 121 QVAIYLDVEPSVIDPTIDD 139
>gi|15827327|ref|NP_301590.1| hypothetical protein ML0761 [Mycobacterium leprae TN]
gi|221229805|ref|YP_002503221.1| hypothetical protein MLBr_00761 [Mycobacterium leprae Br4923]
gi|13092876|emb|CAC30270.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932912|emb|CAR70855.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=167
Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/139 (90%), Positives = 134/139 (97%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RGPLLPPTVPGWRSRAERFDMAVLEAYEPIE+RWQ RVS+LD+AVDEIPRIAA++PE+V
Sbjct 29 IRGPLLPPTVPGWRSRAERFDMAVLEAYEPIEQRWQGRVSELDVAVDEIPRIAARNPENV 88
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEVIADGPIALARLIPAGVDVR NATRARIVLFRKPIERRA DT ELGELLH+ILVA
Sbjct 89 QWPPEVIADGPIALARLIPAGVDVRSNATRARIVLFRKPIERRAHDTVELGELLHDILVA 148
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVAIYLDV+PS IDPT+DD
Sbjct 149 QVAIYLDVEPSAIDPTMDD 167
>gi|183981305|ref|YP_001849596.1| hypothetical protein MMAR_1283 [Mycobacterium marinum M]
gi|183174631|gb|ACC39741.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=176
Score = 246 bits (629), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 126/135 (94%), Positives = 132/135 (98%), Gaps = 0/135 (0%)
Query 5 LLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQWPP 64
LLPPTVPGWRSRAERFDMAVLEAYEPIERRWQ+R+S+LDIAVDEIPRIAAKDP SVQWPP
Sbjct 41 LLPPTVPGWRSRAERFDMAVLEAYEPIERRWQDRLSELDIAVDEIPRIAAKDPHSVQWPP 100
Query 65 EVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQVAI 124
EVIADGPIALARLIPAGVDVRGN+TRARIVLFRKPIERRAKDT ELGELLHEILVAQVAI
Sbjct 101 EVIADGPIALARLIPAGVDVRGNSTRARIVLFRKPIERRAKDTIELGELLHEILVAQVAI 160
Query 125 YLDVDPSVIDPTIDD 139
+LDV+PSVIDPTI D
Sbjct 161 HLDVEPSVIDPTIGD 175
>gi|118618074|ref|YP_906406.1| hypothetical protein MUL_2604 [Mycobacterium ulcerans Agy99]
gi|118570184|gb|ABL04935.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=176
Score = 244 bits (622), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/135 (93%), Positives = 131/135 (98%), Gaps = 0/135 (0%)
Query 5 LLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQWPP 64
LLPPTVPGWRSRAERFDMAVLEAYEPIERRWQ+R+S+LDIAVDEIP IAAKDP SVQWPP
Sbjct 41 LLPPTVPGWRSRAERFDMAVLEAYEPIERRWQDRLSELDIAVDEIPGIAAKDPHSVQWPP 100
Query 65 EVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQVAI 124
EVIADGPIALARLIPAGVDVRGN+TRARIVLFRKPIERRAKDT ELGELLHEILVAQVAI
Sbjct 101 EVIADGPIALARLIPAGVDVRGNSTRARIVLFRKPIERRAKDTIELGELLHEILVAQVAI 160
Query 125 YLDVDPSVIDPTIDD 139
+LDV+PSVIDPTI D
Sbjct 161 HLDVEPSVIDPTIGD 175
>gi|240172511|ref|ZP_04751170.1| hypothetical protein MkanA1_24565 [Mycobacterium kansasii ATCC
12478]
Length=134
Score = 243 bits (620), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 123/133 (93%), Positives = 130/133 (98%), Gaps = 0/133 (0%)
Query 7 PPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQWPPEV 66
PPTVPGWRSR+ERFDMAVLEAYEPIERRWQ+RVS+LD+AVDEIPRI+AKDPESVQWPPEV
Sbjct 1 PPTVPGWRSRSERFDMAVLEAYEPIERRWQDRVSELDVAVDEIPRISAKDPESVQWPPEV 60
Query 67 IADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQVAIYL 126
IADGPI LARLIPAGVDVRGNATRARIVLFRKPIERRAKDT ELGELLHEILVAQVA YL
Sbjct 61 IADGPIPLARLIPAGVDVRGNATRARIVLFRKPIERRAKDTLELGELLHEILVAQVASYL 120
Query 127 DVDPSVIDPTIDD 139
DV+PSV+DPTIDD
Sbjct 121 DVEPSVVDPTIDD 133
>gi|254821369|ref|ZP_05226370.1| hypothetical protein MintA_15637 [Mycobacterium intracellulare
ATCC 13950]
Length=140
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/139 (88%), Positives = 132/139 (95%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRG LLPP+VPGWRSRAERFDMAVLEAYEPIER W +R++ LD+AVDEIPRIAAKDP+SV
Sbjct 1 MRGALLPPSVPGWRSRAERFDMAVLEAYEPIERSWHDRLADLDVAVDEIPRIAAKDPDSV 60
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWP EVIADGPI LARLIPAGVD+RGN+TRARIVLFRKPIERRAKDT ELG+LLHEILVA
Sbjct 61 QWPAEVIADGPIPLARLIPAGVDIRGNSTRARIVLFRKPIERRAKDTIELGDLLHEILVA 120
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVAIYLDV+PSVIDPTIDD
Sbjct 121 QVAIYLDVEPSVIDPTIDD 139
>gi|333991648|ref|YP_004524262.1| hypothetical protein JDM601_3008 [Mycobacterium sp. JDM601]
gi|333487616|gb|AEF37008.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=151
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/138 (85%), Positives = 132/138 (96%), Gaps = 0/138 (0%)
Query 2 RGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQ 61
RGPLLPPTVPGWR+RAERFDMAVLEAYEPIE+RW++R++ LD+AVDEIPRIAAKDP+SVQ
Sbjct 14 RGPLLPPTVPGWRTRAERFDMAVLEAYEPIEQRWKQRLAALDVAVDEIPRIAAKDPDSVQ 73
Query 62 WPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQ 121
WPPEV+ADGPI LARLIPAGVDVRGN TRARI+LFRKPIE+RA D+ ELG+LLHEILVAQ
Sbjct 74 WPPEVVADGPIPLARLIPAGVDVRGNPTRARILLFRKPIEQRANDSVELGDLLHEILVAQ 133
Query 122 VAIYLDVDPSVIDPTIDD 139
VA YLDV+P+VIDPTI+D
Sbjct 134 VATYLDVEPTVIDPTIED 151
>gi|118473439|ref|YP_886202.1| hypothetical protein MSMEG_1832 [Mycobacterium smegmatis str.
MC2 155]
gi|118174726|gb|ABK75622.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=154
Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/139 (85%), Positives = 128/139 (93%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RGPLLP +VPGWRSRAERFDMAVLEAYEPIERRW RVS LD+AVDEIPR+ KDP+SV
Sbjct 15 IRGPLLPRSVPGWRSRAERFDMAVLEAYEPIERRWSSRVSSLDVAVDEIPRMTPKDPDSV 74
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEV+ADGPIALARLIPAGVDVRGN+TRARIVLFRKPIERR K ++EL +LLHEILVA
Sbjct 75 QWPPEVVADGPIALARLIPAGVDVRGNSTRARIVLFRKPIERRVKGSDELADLLHEILVA 134
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVA YL V+PSVIDPTIDD
Sbjct 135 QVATYLGVEPSVIDPTIDD 153
>gi|145225306|ref|YP_001135984.1| hypothetical protein Mflv_4728 [Mycobacterium gilvum PYR-GCK]
gi|315445604|ref|YP_004078483.1| hypothetical protein Mspyr1_40620 [Mycobacterium sp. Spyr1]
gi|145217792|gb|ABP47196.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315263907|gb|ADU00649.1| hypothetical protein Mspyr1_40620 [Mycobacterium sp. Spyr1]
Length=140
Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/139 (90%), Positives = 133/139 (96%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRW ERV+ LD+AVDEIPR+A KDPESV
Sbjct 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWHERVATLDVAVDEIPRLAPKDPESV 60
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEV+ADGPIALARLIPAGVDVRGN+TRARIVLFRKPIERRAKDT+EL ELLHE+LVA
Sbjct 61 QWPPEVVADGPIALARLIPAGVDVRGNSTRARIVLFRKPIERRAKDTDELTELLHELLVA 120
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVA YL V+PSVIDPT+DD
Sbjct 121 QVATYLGVEPSVIDPTLDD 139
>gi|120402735|ref|YP_952564.1| hypothetical protein Mvan_1735 [Mycobacterium vanbaalenii PYR-1]
gi|119955553|gb|ABM12558.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=140
Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/139 (89%), Positives = 132/139 (95%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRW ERVS LD+AVDEIPRIA KDP+SV
Sbjct 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWHERVSTLDVAVDEIPRIAPKDPDSV 60
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWP EV+ADGPIALARLIPAGVDVRG++TRARIVLFRKPIERRAKDT+EL ELLHE+LVA
Sbjct 61 QWPAEVVADGPIALARLIPAGVDVRGDSTRARIVLFRKPIERRAKDTDELTELLHELLVA 120
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVA YL V+PSVIDPT+DD
Sbjct 121 QVATYLGVEPSVIDPTLDD 139
>gi|169630685|ref|YP_001704334.1| hypothetical protein MAB_3605 [Mycobacterium abscessus ATCC 19977]
gi|169242652|emb|CAM63680.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=166
Score = 207 bits (526), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/139 (81%), Positives = 122/139 (88%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
RGPLLPPTVPGWRSRAERFDMAVLEAYEPIER WQ R+ LD+AVDEIPRI KDP+SV
Sbjct 25 FRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERAWQSRLEGLDVAVDEIPRIQPKDPDSV 84
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEVIADGPI LARLIPAGVD RGN TRARIVLFRKPIE RAK + +L +LLH++LVA
Sbjct 85 QWPPEVIADGPIPLARLIPAGVDTRGNTTRARIVLFRKPIELRAKKSGDLSDLLHDLLVA 144
Query 121 QVAIYLDVDPSVIDPTIDD 139
QVA +L V+PSVIDPTI D
Sbjct 145 QVATHLGVEPSVIDPTITD 163
>gi|226305642|ref|YP_002765602.1| hypothetical protein RER_21550 [Rhodococcus erythropolis PR4]
gi|229489440|ref|ZP_04383303.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|226184759|dbj|BAH32863.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229323537|gb|EEN89295.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=162
Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/139 (66%), Positives = 116/139 (84%), Gaps = 0/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RGPLLPP VP R+RAE+FD+ VL+A+ P++ W +R+++LDIAVDE+P+I A DPESV
Sbjct 22 LRGPLLPPEVPARRTRAEKFDLLVLDAFSPVDLAWHDRLTKLDIAVDEVPKIHAHDPESV 81
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
WPPEVIADGP+ L+RLIPAG+D GN TRARIVLFR+P+E+RAKD EEL +L+H++LV
Sbjct 82 TWPPEVIADGPVPLSRLIPAGIDRHGNTTRARIVLFRRPLEQRAKDPEELTDLVHDVLVH 141
Query 121 QVAIYLDVDPSVIDPTIDD 139
QV YL VDP VIDPT+ D
Sbjct 142 QVGTYLGVDPQVIDPTLPD 160
>gi|325675682|ref|ZP_08155366.1| hypothetical protein HMPREF0724_13148 [Rhodococcus equi ATCC
33707]
gi|325553653|gb|EGD23331.1| hypothetical protein HMPREF0724_13148 [Rhodococcus equi ATCC
33707]
Length=174
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/137 (65%), Positives = 114/137 (84%), Gaps = 0/137 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RGPL PP +P R+RAE+FD VL A+EPI+ RW +R+++LDIAVDE+PRI A DP+SV
Sbjct 33 IRGPLFPPDLPAARTRAEKFDQLVLGAFEPIDARWHDRLTKLDIAVDEVPRIRAIDPDSV 92
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
WPPEV+ADGP+ L+RLIPAG+D RG ATRARIVLFR+PIE RAKD ++L +L+H++LV
Sbjct 93 NWPPEVVADGPVPLSRLIPAGIDRRGTATRARIVLFRRPIELRAKDPQDLEDLVHDVLVE 152
Query 121 QVAIYLDVDPSVIDPTI 137
QV+ YL VDP VIDP +
Sbjct 153 QVSTYLGVDPEVIDPDL 169
>gi|312140688|ref|YP_004008024.1| hypothetical protein REQ_33490 [Rhodococcus equi 103S]
gi|311890027|emb|CBH49345.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=174
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/137 (65%), Positives = 114/137 (84%), Gaps = 0/137 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RGPL PP +P R+RAE+FD VL A+EPI+ RW +R+++LDIAVDE+PRI A DP+SV
Sbjct 33 IRGPLFPPDLPAARTRAEKFDQLVLGAFEPIDARWHDRLTKLDIAVDEVPRIRAIDPDSV 92
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
WPPEV+ADGP+ L+RLIPAG+D RG ATRARIVLFR+PIE RAKD ++L +L+H++LV
Sbjct 93 NWPPEVVADGPVPLSRLIPAGIDRRGTATRARIVLFRRPIELRAKDPQDLEDLVHDVLVE 152
Query 121 QVAIYLDVDPSVIDPTI 137
QV+ YL VDP VIDP +
Sbjct 153 QVSTYLGVDPEVIDPDL 169
>gi|226365785|ref|YP_002783568.1| hypothetical protein ROP_63760 [Rhodococcus opacus B4]
gi|226244275|dbj|BAH54623.1| hypothetical protein [Rhodococcus opacus B4]
Length=163
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/137 (60%), Positives = 113/137 (83%), Gaps = 0/137 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RG + PP P RSRAE+FD+ VLEA+ PI+ RW+ER+++LDIAVDE+P+I A DP+SV
Sbjct 22 IRGSVFPPDAPARRSRAEKFDLVVLEAFAPIDSRWRERLTKLDIAVDEVPKIHALDPDSV 81
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
WP EV+ADGP+ L+RLIPAG+D G+ TRAR+VLFR+P+E+RAKD ++L +L+H++LV
Sbjct 82 NWPAEVVADGPVPLSRLIPAGIDRHGSTTRARVVLFRRPLEQRAKDPDDLTDLVHDVLVQ 141
Query 121 QVAIYLDVDPSVIDPTI 137
QV+ YL V+P VIDP +
Sbjct 142 QVSTYLGVEPEVIDPDL 158
>gi|54026596|ref|YP_120838.1| hypothetical protein nfa46230 [Nocardia farcinica IFM 10152]
gi|54018104|dbj|BAD59474.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=159
Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/135 (61%), Positives = 109/135 (81%), Gaps = 0/135 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RGP+LPPTVP WR+R ++FD VLEA+ PI+ RW +R+++LDIAVD++P+I P+SV
Sbjct 22 VRGPMLPPTVPAWRTRGQQFDRLVLEAFAPIDSRWHDRLTKLDIAVDDVPKIRPLHPDSV 81
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
WP EV+ADGP+ L+RL+PAG+D G ATRARIVLFRKP+E RA D ++L +LL E+L+
Sbjct 82 SWPDEVVADGPVPLSRLVPAGLDRHGAATRARIVLFRKPLELRAGDPDDLVDLLREVLIQ 141
Query 121 QVAIYLDVDPSVIDP 135
QVA YL VDP +IDP
Sbjct 142 QVATYLGVDPDIIDP 156
>gi|111023277|ref|YP_706249.1| hypothetical protein RHA1_ro06314 [Rhodococcus jostii RHA1]
gi|110822807|gb|ABG98091.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=138
Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 80/133 (61%), Positives = 110/133 (83%), Gaps = 0/133 (0%)
Query 5 LLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQWPP 64
+ PP P RSRAE+FD+ VLEA+ PI+ RW+ER+++LDIAVDE+P+I A DP+SV WP
Sbjct 1 MFPPDAPARRSRAEKFDLVVLEAFAPIDARWRERLTKLDIAVDEVPKIHALDPDSVNWPA 60
Query 65 EVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQVAI 124
EV+ADGP+ L+RLIPAG+D G+ TRAR+VLFR+P+E+RAKD ++L +L+H++LV QV+
Sbjct 61 EVVADGPVPLSRLIPAGIDRHGSTTRARVVLFRRPLEQRAKDPDDLTDLVHDVLVQQVST 120
Query 125 YLDVDPSVIDPTI 137
YL V+P VIDP +
Sbjct 121 YLGVEPEVIDPDL 133
>gi|333921462|ref|YP_004495043.1| hypothetical protein AS9A_3805 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483683|gb|AEF42243.1| hypothetical protein AS9A_3805 [Amycolicicoccus subflavus DQS3-9A1]
Length=135
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/134 (60%), Positives = 105/134 (79%), Gaps = 0/134 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRG L+ +VP W+SRA++FD L A+EPIE RW +R+ +LDIAVDE+P I A +PESV
Sbjct 1 MRGRLVQQSVPTWKSRAQKFDAVALAAFEPIEVRWHKRLGELDIAVDEVPMIRALNPESV 60
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
WPPE++ADGP+ L+RL+PAG+D RG ATRARIVLFR+ +E RA+ EEL +L+H+ILV
Sbjct 61 TWPPEIVADGPVPLSRLVPAGIDKRGQATRARIVLFRRALELRAETAEELTQLVHDILVE 120
Query 121 QVAIYLDVDPSVID 134
QVA YL + P +D
Sbjct 121 QVATYLGLSPDEVD 134
>gi|262203189|ref|YP_003274397.1| hypothetical protein Gbro_3300 [Gordonia bronchialis DSM 43247]
gi|262086536|gb|ACY22504.1| hypothetical protein Gbro_3300 [Gordonia bronchialis DSM 43247]
Length=138
Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/134 (59%), Positives = 102/134 (77%), Gaps = 0/134 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MR PLLPP+VP W SR++ FD LEA+ I+ RW ++++ LDIAVDEIPR+ +DPE+V
Sbjct 1 MRAPLLPPSVPAWNSRSDEFDAVALEAFADIDARWHDQIAGLDIAVDEIPRLLPRDPETV 60
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWP EV ADG + LARL+PAG+DV G TRA+I+LFR+P+E RAK +L EL+HE+LV
Sbjct 61 QWPDEVTADGAVPLARLMPAGIDVHGAPTRAQIILFRRPLESRAKRGADLLELVHEVLVQ 120
Query 121 QVAIYLDVDPSVID 134
QVA +L VD ID
Sbjct 121 QVATHLGVDEDTID 134
>gi|296393057|ref|YP_003657941.1| hypothetical protein Srot_0628 [Segniliparus rotundus DSM 44985]
gi|296180204|gb|ADG97110.1| hypothetical protein Srot_0628 [Segniliparus rotundus DSM 44985]
Length=190
Score = 160 bits (404), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/135 (58%), Positives = 100/135 (75%), Gaps = 0/135 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RG L+P +P WRS+ E+FD VLEA PI++RW + + LDIAVDE+PR+ + V
Sbjct 49 LRGDLVPQQLPAWRSKREKFDSLVLEALSPIDQRWHDHLVGLDIAVDEVPRMHPLHQQFV 108
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEV ADGP+ LARLIPAGVDV G TRAR+VLFR+P+E RA+D +EL +LLH +LV
Sbjct 109 QWPPEVTADGPVPLARLIPAGVDVSGRHTRARVVLFRRPLEDRAEDPDELVDLLHHVLVR 168
Query 121 QVAIYLDVDPSVIDP 135
Q+A YL + IDP
Sbjct 169 QIATYLGLTEEAIDP 183
>gi|317506111|ref|ZP_07963936.1| hypothetical protein HMPREF9336_00305 [Segniliparus rugosus ATCC
BAA-974]
gi|316255610|gb|EFV14855.1| hypothetical protein HMPREF9336_00305 [Segniliparus rugosus ATCC
BAA-974]
Length=190
Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/135 (57%), Positives = 100/135 (75%), Gaps = 0/135 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RG L+P +P WRS+ E+FD VLEA PI++RW + + LDIAVD++PR+ + V
Sbjct 49 LRGDLVPQQLPAWRSKREKFDSLVLEALSPIDQRWHDHLVGLDIAVDDVPRMHPLHQQFV 108
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
QWPPEV ADGP+ LARLIPAGVD+ G TRAR+VLFR+P+E RA+D +EL +LLH +LV
Sbjct 109 QWPPEVTADGPVPLARLIPAGVDLSGRHTRARVVLFRRPLEDRAEDPDELVDLLHHVLVR 168
Query 121 QVAIYLDVDPSVIDP 135
Q+A YL + IDP
Sbjct 169 QIATYLGLTEEAIDP 183
>gi|343926916|ref|ZP_08766409.1| hypothetical protein GOALK_072_01380 [Gordonia alkanivorans NBRC
16433]
gi|343763276|dbj|GAA13335.1| hypothetical protein GOALK_072_01380 [Gordonia alkanivorans NBRC
16433]
Length=173
Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/132 (56%), Positives = 98/132 (75%), Gaps = 0/132 (0%)
Query 3 GPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQW 62
PLLP VP + +R++ FD LEA+ I+ +W ++++ LDIAVDEIPR+ +DPE+V+W
Sbjct 38 SPLLPQNVPAYNTRSDEFDAVALEAFAEIDAQWHDQLAGLDIAVDEIPRLLPRDPETVEW 97
Query 63 PPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQV 122
P EV ADG + LARLIPAG+DV G TRA+I+LFR+P+E RAK +L EL+HE+LV QV
Sbjct 98 PDEVTADGAVPLARLIPAGMDVHGVPTRAQIILFRRPLESRAKKGTDLLELVHEVLVQQV 157
Query 123 AIYLDVDPSVID 134
A +L VD ID
Sbjct 158 ATHLGVDEDTID 169
>gi|237786083|ref|YP_002906788.1| hypothetical protein ckrop_1516 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758995|gb|ACR18245.1| hypothetical protein ckrop_1516 [Corynebacterium kroppenstedtii
DSM 44385]
Length=150
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/138 (53%), Positives = 96/138 (70%), Gaps = 1/138 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RGP+LPP VP W SR FD AVL+AY PI +W E + LDIA+D +PR+ ++ +V
Sbjct 14 IRGPILPPEVPRWTSRPAEFDQAVLDAYAPIHEQWSEELEHLDIALDTVPRMRSRQLTTV 73
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
WP EV+ADG + L RLIPAGVD G TR RIV+FR+PIE R ++ E ELLH I+
Sbjct 74 -WPDEVVADGAVPLGRLIPAGVDDDGRPTRPRIVVFRRPIEMRTQNMTERSELLHYIIGK 132
Query 121 QVAIYLDVDPSVIDPTID 138
VA YL+V+P +IDP ++
Sbjct 133 LVATYLNVEPRMIDPDLE 150
>gi|296138912|ref|YP_003646155.1| hypothetical protein Tpau_1185 [Tsukamurella paurometabola DSM
20162]
gi|296027046|gb|ADG77816.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=163
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/128 (55%), Positives = 97/128 (76%), Gaps = 0/128 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+R PL+P +P +R+RA+ FD VL+AY I+ W +R++ LDIAVD++P I +DP+SV
Sbjct 24 LRAPLVPRGLPAYRTRAQDFDEVVLDAYAEIDGLWHDRLTDLDIAVDDVPGILPRDPDSV 83
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
WP EV ADGPI LARL+PAG+D RGN TRAR++LFR+P++RRAK+ +L E + ILV
Sbjct 84 SWPDEVEADGPIPLARLVPAGIDRRGNHTRARLILFRRPLQRRAKNDADLLEEILAILVH 143
Query 121 QVAIYLDV 128
Q++ YL V
Sbjct 144 QISDYLGV 151
>gi|326381470|ref|ZP_08203164.1| hypothetical protein SCNU_00925 [Gordonia neofelifaecis NRRL
B-59395]
gi|326199717|gb|EGD56897.1| hypothetical protein SCNU_00925 [Gordonia neofelifaecis NRRL
B-59395]
Length=169
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/129 (55%), Positives = 95/129 (74%), Gaps = 0/129 (0%)
Query 6 LPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQWPPE 65
+P ++P R+RA+RFD A +EA+ I+ RW + ++ LD+AVD+IPR+ + E VQWP E
Sbjct 35 MPMSMPAHRTRADRFDAAAVEAFAEIDSRWHDHLTGLDVAVDDIPRMLPRGDEPVQWPDE 94
Query 66 VIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQVAIY 125
V ADG + LARLIPAGVDV G TRA+I+LFR+P+E RA D EEL E+L E+L+ QVA Y
Sbjct 95 VTADGQVPLARLIPAGVDVAGRPTRAQIILFRRPLELRAHDDEELPEILREVLIEQVATY 154
Query 126 LDVDPSVID 134
L VD ++
Sbjct 155 LGVDEETVE 163
>gi|227832489|ref|YP_002834196.1| hypothetical protein cauri_0661 [Corynebacterium aurimucosum
ATCC 700975]
gi|262183646|ref|ZP_06043067.1| hypothetical protein CaurA7_06621 [Corynebacterium aurimucosum
ATCC 700975]
gi|227453505|gb|ACP32258.1| hypothetical protein cauri_0661 [Corynebacterium aurimucosum
ATCC 700975]
Length=156
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/134 (56%), Positives = 92/134 (69%), Gaps = 1/134 (0%)
Query 2 RGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQ 61
RGPLLP P +RS AERFDMAVLEAY PI + E+++ LD+AVD +PR+ +V
Sbjct 20 RGPLLPHNTPRYRSSAERFDMAVLEAYAPIHNAFAEQLTGLDLAVDTVPRMRLSVDMTV- 78
Query 62 WPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQ 121
P EVIADGP+ L R++PAGVD G TRAR+V+FR P+E R +E ELL +L A
Sbjct 79 MPDEVIADGPVPLGRIVPAGVDSDGQPTRARLVIFRMPVEERVHSAQEREELLSTVLTAL 138
Query 122 VAIYLDVDPSVIDP 135
VA YL+VDP IDP
Sbjct 139 VANYLNVDPGDIDP 152
>gi|296118791|ref|ZP_06837367.1| conserved hypothetical protein [Corynebacterium ammoniagenes
DSM 20306]
gi|295968280|gb|EFG81529.1| conserved hypothetical protein [Corynebacterium ammoniagenes
DSM 20306]
Length=158
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 94/138 (69%), Gaps = 1/138 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RGPLLP P +R+R +RFDM VLEAY PI + E + LDIAVD +PR+ + ++
Sbjct 21 LRGPLLPQQTPRFRTRGQRFDMEVLEAYSPIHNAYLEELRGLDIAVDTVPRMRLRADMTI 80
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
P +++ADGP+ L R++PAGVD G TRAR+V+FRKPIE R +E ELL +L A
Sbjct 81 -LPDDIVADGPVPLGRIVPAGVDAGGRPTRARLVIFRKPIESRCASRQEREELLSAVLTA 139
Query 121 QVAIYLDVDPSVIDPTID 138
V+ YL++DP VIDP +
Sbjct 140 LVSNYLNIDPEVIDPRFN 157
>gi|227505497|ref|ZP_03935546.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
gi|227197919|gb|EEI77967.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
Length=156
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/132 (54%), Positives = 94/132 (72%), Gaps = 1/132 (0%)
Query 4 PLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQWP 63
PLLP T P +RS +ERFDMAVLEAY PI+ + E+++ LD+AVD +PR+ +V P
Sbjct 22 PLLPQTTPRFRSNSERFDMAVLEAYAPIQNAFAEQLAGLDLAVDTVPRMRLSADMTV-LP 80
Query 64 PEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQVA 123
E+IADGP+ L R++PAGVD G TRAR+V+FR PIE RA++ E ELL +L A VA
Sbjct 81 EEIIADGPVPLGRVVPAGVDSAGRPTRARMVIFRMPIEERAQNPGERAELLGTVLTALVA 140
Query 124 IYLDVDPSVIDP 135
YL++DP +DP
Sbjct 141 NYLNLDPEDVDP 152
>gi|255323837|ref|ZP_05364963.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|311739837|ref|ZP_07713671.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|255299017|gb|EET78308.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|311304910|gb|EFQ80979.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length=156
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/135 (53%), Positives = 91/135 (68%), Gaps = 1/135 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
MRGPLLP P +RS E FDMAVLEAY PI+ + ++ LD+AVD IPR+ P+
Sbjct 19 MRGPLLPQQTPRYRSAREHFDMAVLEAYAPIQNAFAPQLRGLDLAVDTIPRMRLS-PDMT 77
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
P E+IADGP+ L R++PAGVD G TRAR+V+FR PIE+RA E ELL ++ A
Sbjct 78 VLPDEIIADGPVPLGRVVPAGVDSEGQPTRARLVIFRMPIEQRASTPSERSELLGTVITA 137
Query 121 QVAIYLDVDPSVIDP 135
VA YL++DP +DP
Sbjct 138 LVANYLNLDPEEVDP 152
>gi|325000744|ref|ZP_08121856.1| hypothetical protein PseP1_18342 [Pseudonocardia sp. P1]
Length=157
Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/130 (51%), Positives = 93/130 (72%), Gaps = 0/130 (0%)
Query 5 LLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQWPP 64
+ P + P +R+RAERFD VLEA EPIE RW ++ LD+AVD++P + P+ V W
Sbjct 26 MYPVSTPAFRTRAERFDAKVLEALEPIEARWGPELADLDLAVDDVPAVDRTSPDEVTWGT 85
Query 65 EVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQVAI 124
V+AD + LA L+PAGVD G TRARIVL+R+P+E RA++ E+L +L+HE+LV QVA
Sbjct 86 GVLADVGVPLAHLVPAGVDPAGLPTRARIVLYRRPLEARARNGEDLADLVHEVLVEQVAE 145
Query 125 YLDVDPSVID 134
YL+++P +D
Sbjct 146 YLNIEPDAVD 155
>gi|340531500|gb|AEK46705.1| hypothetical protein RAM_41190 [Amycolatopsis mediterranei S699]
Length=154
Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/135 (54%), Positives = 97/135 (72%), Gaps = 5/135 (3%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RG L P T+P SRAERFD VL+A EPIE RW+ +++LD+AVD++P + E+
Sbjct 22 LRGTLYPATLPAAASRAERFDALVLDALEPIEARWRHELTKLDVAVDDVPEVR----ENG 77
Query 61 QWPPE-VIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILV 119
P + V+ DG + L+RL+PAGVD G TRARIVL+R+P+E RAKD EL EL+H++LV
Sbjct 78 HSPADGVLHDGAVPLSRLVPAGVDRTGLPTRARIVLYRRPLEARAKDPSELAELVHDVLV 137
Query 120 AQVAIYLDVDPSVID 134
QVA YL V+P VI+
Sbjct 138 EQVAGYLGVEPDVIE 152
>gi|300857925|ref|YP_003782908.1| hypothetical protein cpfrc_00508 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685379|gb|ADK28301.1| hypothetical protein cpfrc_00508 [Corynebacterium pseudotuberculosis
FRC41]
gi|302205654|gb|ADL09996.1| Hypothetical protein CpC231_0509 [Corynebacterium pseudotuberculosis
C231]
gi|302330205|gb|ADL20399.1| Hypothetical protein Cp1002_0505 [Corynebacterium pseudotuberculosis
1002]
gi|308275889|gb|ADO25788.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
I19]
gi|341824319|gb|AEK91840.1| Hypothetical protein CpPAT10_0508 [Corynebacterium pseudotuberculosis
PAT10]
Length=151
Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/135 (53%), Positives = 93/135 (69%), Gaps = 1/135 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RGP P VP +RSR FD AVLEAY PI++ + ++++ LDIAVD +PR+ + ++
Sbjct 14 LRGPTFPTAVPRYRSRRSLFDAAVLEAYAPIQQSFAQQLANLDIAVDTVPRMRL-NLDAA 72
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
P EV ADGPI L R+IPAG+D G TRARIVLFR PIE+R T+E ELL +L +
Sbjct 73 LLPDEVAADGPIPLGRVIPAGIDHLGRPTRARIVLFRMPIEQRTNSTQERQELLTMVLTS 132
Query 121 QVAIYLDVDPSVIDP 135
VA YL+V P+ IDP
Sbjct 133 LVANYLNVSPTDIDP 147
>gi|257057074|ref|YP_003134906.1| hypothetical protein Svir_31040 [Saccharomonospora viridis DSM
43017]
gi|256586946|gb|ACU98079.1| hypothetical protein Svir_31040 [Saccharomonospora viridis DSM
43017]
Length=143
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/138 (52%), Positives = 97/138 (71%), Gaps = 10/138 (7%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RGPL P TVP SRAE+FD VL+A EPIE RW+ +++LD+AVDE+P + +
Sbjct 10 LRGPLFPSTVPAASSRAEKFDALVLDALEPIEARWRHDLTELDVAVDEVPEV------HM 63
Query 61 QWPPE----VIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHE 116
+ PP V+ DG + L+RL+P GVD G TRARIVL+R+P+E RAKD EL EL+H+
Sbjct 64 EIPPTQIDGVLLDGRVPLSRLVPPGVDRDGLPTRARIVLYRRPLEARAKDPAELSELVHD 123
Query 117 ILVAQVAIYLDVDPSVID 134
+LV Q+A YL V+P +I+
Sbjct 124 VLVEQIANYLGVEPDIIE 141
>gi|213964775|ref|ZP_03392974.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
gi|213952311|gb|EEB63694.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
Length=160
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/130 (49%), Positives = 92/130 (71%), Gaps = 2/130 (1%)
Query 10 VPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQWPPEVIAD 69
VP W+SR+E FD AV++AY P+++RW ++S LDIA+D IPR+ + + +P E++AD
Sbjct 30 VPRWKSRSEAFDQAVIDAYAPLDQRWSRQLSHLDIAIDTIPRMQLR--PDMYFPEEIVAD 87
Query 70 GPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQVAIYLDVD 129
GP+ L RLIPAG+D GN TR +V+FR+PIERR EL ++L +L VA+YL +D
Sbjct 88 GPVPLGRLIPAGIDRVGNPTRPCVVVFRRPIERRVSGRVELDQMLQNVLTRLVAVYLGID 147
Query 130 PSVIDPTIDD 139
P +DP+ D+
Sbjct 148 PVEVDPSFDE 157
>gi|337290178|ref|YP_004629199.1| hypothetical protein CULC22_00564 [Corynebacterium ulcerans BR-AD22]
gi|334696300|gb|AEG81097.1| hypothetical protein CULC809_00557 [Corynebacterium ulcerans
809]
gi|334698484|gb|AEG83280.1| hypothetical protein CULC22_00564 [Corynebacterium ulcerans BR-AD22]
Length=151
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/135 (52%), Positives = 92/135 (69%), Gaps = 1/135 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RGP P VP +RSR FD AVLEAY PI++ + ++++ LDIAVD +PR+ + +
Sbjct 14 LRGPAFPTAVPRYRSRRSLFDAAVLEAYAPIQQSFAQQLAHLDIAVDTVPRMRL-NANAA 72
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
P EV ADGP+ L R+IPAG+D G+ TRARIVLFR PIE+R +E ELL +L +
Sbjct 73 LLPDEVAADGPVPLGRVIPAGIDHLGSPTRARIVLFRMPIEQRTNSAQERQELLTMVLTS 132
Query 121 QVAIYLDVDPSVIDP 135
VA YL+V P+ IDP
Sbjct 133 LVANYLNVSPTDIDP 147
>gi|331698954|ref|YP_004335193.1| hypothetical protein Psed_5203 [Pseudonocardia dioxanivorans
CB1190]
gi|326953643|gb|AEA27340.1| hypothetical protein Psed_5203 [Pseudonocardia dioxanivorans
CB1190]
Length=159
Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 93/128 (73%), Gaps = 0/128 (0%)
Query 7 PPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQWPPEV 66
P ++P R+RAE+FD+ VLEA EPIE RW +++LD+AVDE+P + P+ V W V
Sbjct 28 PVSLPASRTRAEKFDLLVLEALEPIELRWGPELAELDLAVDEVPEVDETSPDDVVWGAGV 87
Query 67 IADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQVAIYL 126
+AD + LA+L+PAGVD G +RARIV++R+P+E RA+ +L +LLHE+LV QVA YL
Sbjct 88 LADVGVPLAQLVPAGVDHAGLPSRARIVIYRRPLEARARGGADLADLLHEVLVEQVAEYL 147
Query 127 DVDPSVID 134
+++P +D
Sbjct 148 NIEPDAVD 155
>gi|302530045|ref|ZP_07282387.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302438940|gb|EFL10756.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=154
Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/136 (52%), Positives = 96/136 (71%), Gaps = 7/136 (5%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIP--RIAAKDPE 58
+RG L P ++P SRAERFD VL+A EPIE RW+ +++LD+AVD++P R+ + P
Sbjct 22 LRGTLYPASLPAAASRAERFDALVLDALEPIEARWRHELTKLDVAVDDVPEVRMDGRAPA 81
Query 59 SVQWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEIL 118
V+ DG + L+RL+PAGVD G TRARIVL+R+P+E RAKD EL +L+H++L
Sbjct 82 D-----GVLHDGAVPLSRLVPAGVDRTGLPTRARIVLYRRPLEARAKDPSELADLVHDVL 136
Query 119 VAQVAIYLDVDPSVID 134
V QVA YL V+P VI+
Sbjct 137 VEQVAGYLGVEPDVIE 152
>gi|62389633|ref|YP_225035.1| hypothetical protein cg0852 [Corynebacterium glutamicum ATCC
13032]
gi|145294906|ref|YP_001137727.1| hypothetical protein cgR_0853 [Corynebacterium glutamicum R]
gi|21323510|dbj|BAB98137.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41324968|emb|CAF19449.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
13032]
gi|140844826|dbj|BAF53825.1| hypothetical protein [Corynebacterium glutamicum R]
Length=152
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/139 (49%), Positives = 91/139 (66%), Gaps = 1/139 (0%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESV 60
+RGPL+P VP SR + FD AVLEAY P+ +Q+ +S LDIAVD +PR+ ++
Sbjct 14 LRGPLMPVEVPRHASRRQAFDRAVLEAYSPLYGIYQKELSNLDIAVDTVPRMRLSADLAI 73
Query 61 QWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVA 120
P E+ ADGP+ L R+IP +D +GN TRARIV+FR PIE+R + E ELL +L +
Sbjct 74 -LPDEITADGPVPLGRVIPPAIDTKGNPTRARIVIFRMPIEQRVTNAVERHELLTHVLTS 132
Query 121 QVAIYLDVDPSVIDPTIDD 139
VA YL++DP IDP D
Sbjct 133 LVANYLNIDPRDIDPGFQD 151
>gi|38233292|ref|NP_939059.1| hypothetical protein DIP0685 [Corynebacterium diphtheriae NCTC
13129]
gi|38199551|emb|CAE49202.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length=151
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/138 (50%), Positives = 93/138 (68%), Gaps = 3/138 (2%)
Query 1 MRGPLLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRI-AAKDPES 59
+RGPL +P + SR +RFD VLEAY P+++R+ +++ LDIAVD +PR+ DP
Sbjct 14 VRGPLFSSALPRYCSRRQRFDATVLEAYAPLQQRYAAQLTHLDIAVDTVPRMRLGFDPAL 73
Query 60 VQWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILV 119
V P EV+ADGP+ L R+IPAGVD G+ TRAR+VLFR IE+R +E EL+ +L
Sbjct 74 V--PDEVVADGPVPLGRVIPAGVDSSGHPTRARLVLFRMAIEQRVVSAQERRELVTTVLT 131
Query 120 AQVAIYLDVDPSVIDPTI 137
A VA YL++ P+ IDP
Sbjct 132 ALVANYLNISPTDIDPNF 149
>gi|134102895|ref|YP_001108556.1| hypothetical protein SACE_6462 [Saccharopolyspora erythraea NRRL
2338]
gi|291008020|ref|ZP_06565993.1| hypothetical protein SeryN2_26156 [Saccharopolyspora erythraea
NRRL 2338]
gi|133915518|emb|CAM05631.1| hypothetical protein SACE_6462 [Saccharopolyspora erythraea NRRL
2338]
Length=125
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/121 (55%), Positives = 90/121 (75%), Gaps = 0/121 (0%)
Query 14 RSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPESVQWPPEVIADGPIA 73
RSR++RFD VLEA EPIE+RW ++QLD+AVDE+P + E V W +V+ D +
Sbjct 3 RSRSQRFDALVLEALEPIEQRWHAELTQLDVAVDEVPEVTTTAAEKVVWDDDVVVDANVP 62
Query 74 LARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILVAQVAIYLDVDPSVI 133
LARL+PAGVD RG TRARIVL+R+P+E RA+D ++ +LLH++L+ QVA YL +DP VI
Sbjct 63 LARLVPAGVDRRGLPTRARIVLYRRPLEARARDGTDMADLLHDVLIEQVATYLGLDPDVI 122
Query 134 D 134
+
Sbjct 123 E 123
>gi|172040154|ref|YP_001799867.1| hypothetical protein cur_0473 [Corynebacterium urealyticum DSM
7109]
gi|171851458|emb|CAQ04434.1| hypothetical protein cu0473 [Corynebacterium urealyticum DSM
7109]
Length=154
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/139 (48%), Positives = 96/139 (70%), Gaps = 3/139 (2%)
Query 2 RGP--LLPPTVPGWRSRAERFDMAVLEAYEPIERRWQERVSQLDIAVDEIPRIAAKDPES 59
RGP +L P +P +R+R+E FD AVL+AYE I R+ ++++ LD+AVD +PR+ + +
Sbjct 14 RGPRGILLPDLPRYRTRSEDFDQAVLDAYERILDRFDDQLASLDLAVDLVPRMRLQHGYT 73
Query 60 VQWPPEVIADGPIALARLIPAGVDVRGNATRARIVLFRKPIERRAKDTEELGELLHEILV 119
QWP +V+ADG + L RLIPAGVD G+ TR R+++FR+P+E RA+ EE ++L I+
Sbjct 74 -QWPSDVVADGKVPLGRLIPAGVDSSGSPTRPRLIVFRRPVEMRARSKEERADMLRYIVT 132
Query 120 AQVAIYLDVDPSVIDPTID 138
VA YL+V P IDP D
Sbjct 133 RLVAHYLNVGPETIDPRFD 151
Lambda K H
0.320 0.139 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131443546824
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40