BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3263 Length=553 Score E Sequences producing significant alignments: (Bits) Value gi|15610399|ref|NP_217780.1| DNA methylase (modification methyla... 1131 0.0 gi|253800306|ref|YP_003033307.1| DNA methylase [Mycobacterium tu... 1129 0.0 gi|289747081|ref|ZP_06506459.1| DNA methylase [Mycobacterium tub... 1128 0.0 gi|289444845|ref|ZP_06434589.1| DNA methylase [Mycobacterium tub... 1125 0.0 gi|340628241|ref|YP_004746693.1| putative DNA methylase [Mycobac... 1124 0.0 gi|308232399|ref|ZP_07415929.2| DNA methylase [Mycobacterium tub... 1078 0.0 gi|339296090|gb|AEJ48201.1| DNA methylase [Mycobacterium tubercu... 1077 0.0 gi|294993796|ref|ZP_06799487.1| putative DNA methylase [Mycobact... 1054 0.0 gi|15827322|ref|NP_301585.1| DNA methylase [Mycobacterium leprae... 910 0.0 gi|240172506|ref|ZP_04751165.1| putative DNA methylase [Mycobact... 820 0.0 gi|183981301|ref|YP_001849592.1| DNA methylase [Mycobacterium ma... 795 0.0 gi|342861466|ref|ZP_08718113.1| BpmI methyltransferase [Mycobact... 794 0.0 gi|41409474|ref|NP_962310.1| hypothetical protein MAP3376 [Mycob... 793 0.0 gi|336459661|gb|EGO38596.1| adenine-specific DNA methylase [Myco... 791 0.0 gi|118462723|ref|YP_883367.1| BpmI methyltransferase [Mycobacter... 791 0.0 gi|118618078|ref|YP_906410.1| DNA methylase [Mycobacterium ulcer... 784 0.0 gi|254776662|ref|ZP_05218178.1| BpmI methyltransferase [Mycobact... 783 0.0 gi|254821365|ref|ZP_05226366.1| hypothetical protein MintA_15617... 779 0.0 gi|296168942|ref|ZP_06850611.1| DNA (cytosine-5-)-methyltransfer... 778 0.0 gi|21914204|gb|AAM81324.1|AF522187_2 BpmI methyltransferase [Bac... 378 1e-102 gi|344203797|ref|YP_004788940.1| modification methyltransferase ... 346 7e-93 gi|317153586|ref|YP_004121634.1| N-6 DNA methylase [Desulfovibri... 342 7e-92 gi|334135654|ref|ZP_08509137.1| N-6 DNA Methylase [Paenibacillus... 338 2e-90 gi|150025617|ref|YP_001296443.1| modification methyltransferase ... 337 3e-90 gi|308274110|emb|CBX30709.1| hypothetical protein N47_E42210 [un... 335 2e-89 gi|308229512|gb|ADO24167.1| M.AcuI [Acinetobacter calcoaceticus] 332 1e-88 gi|291461471|dbj|BAI83353.1| conserved hypothetical protein [Mac... 331 2e-88 gi|15896770|ref|NP_350119.1| site-specific modification DNA-meth... 320 4e-85 gi|73669700|ref|YP_305715.1| DNA methylase [Methanosarcina barke... 317 4e-84 gi|255027083|ref|ZP_05299069.1| DNA methylase (modification meth... 314 3e-83 gi|225868543|ref|YP_002744491.1| type II restriction enzyme and ... 309 9e-82 gi|336055457|ref|YP_004563743.1| hypothetical protein WANG_p2038... 300 3e-79 gi|342218184|ref|ZP_08710809.1| hypothetical protein HMPREF1040_... 300 6e-79 gi|325563988|gb|ADZ31407.1| M.TliI [Thermococcus litoralis] 292 8e-77 gi|262045267|ref|ZP_06018292.1| modification methylase Eco57IB [... 273 7e-71 gi|331019596|gb|EGH99652.1| modification methyltransferase [Pseu... 272 1e-70 gi|298485666|ref|ZP_07003745.1| N6 adenine-specific DNA methyltr... 269 9e-70 gi|254361369|ref|ZP_04977511.1| possible type IV site-specific d... 266 9e-69 gi|309704638|emb|CBJ03988.1| putative modification methylase [Es... 248 2e-63 gi|345391662|gb|EGX21448.1| modification methylase Eco57IB [Esch... 248 2e-63 gi|145221937|ref|YP_001132615.1| N-6 DNA methylase [Mycobacteriu... 248 2e-63 gi|315446326|ref|YP_004079205.1| type I restriction-modification... 243 8e-62 gi|120406392|ref|YP_956221.1| methyltransferase small [Mycobacte... 240 6e-61 gi|311741945|ref|ZP_07715755.1| conserved hypothetical protein [... 236 7e-60 gi|308176337|ref|YP_003915743.1| adenine-specific DNA-methyltran... 222 1e-55 gi|127406|sp|P25240.1|MT57_ECOLX RecName: Full=Modification meth... 219 8e-55 gi|319947854|ref|ZP_08022041.1| hypothetical protein ES5_00957 [... 218 2e-54 gi|295837644|ref|ZP_06824577.1| modification methylase [Streptom... 217 6e-54 gi|297622882|ref|YP_003704316.1| type I restriction-modification... 217 6e-54 gi|269217860|ref|ZP_06161714.1| DNA (cytosine-5-)-methyltransfer... 214 3e-53 >gi|15610399|ref|NP_217780.1| DNA methylase (modification methylase) (methyltransferase) [Mycobacterium tuberculosis H37Rv] gi|15842853|ref|NP_337890.1| modification methylase [Mycobacterium tuberculosis CDC1551] gi|31794443|ref|NP_856936.1| DNA methylase (modification methylase) (methyltransferase) [Mycobacterium bovis AF2122/97] 34 more sequence titles Length=553 Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust. Identities = 553/553 (100%), Positives = 553/553 (100%), Gaps = 0/553 (0%) Query 1 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA 60 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA Sbjct 1 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA 60 Query 61 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS 120 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS Sbjct 61 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS 120 Query 121 WDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG 180 WDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG Sbjct 121 WDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG 180 Query 181 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT 240 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT Sbjct 181 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT 240 Query 241 VRLGDANDLNALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL 300 VRLGDANDLNALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL Sbjct 241 VRLGDANDLNALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL 300 Query 301 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR 360 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR Sbjct 301 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR 360 Query 361 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP 420 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP Sbjct 361 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP 420 Query 421 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE 480 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE Sbjct 421 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE 480 Query 481 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL Sbjct 481 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 Query 541 TLRDRRTKRGSRR 553 TLRDRRTKRGSRR Sbjct 541 TLRDRRTKRGSRR 553 >gi|253800306|ref|YP_003033307.1| DNA methylase [Mycobacterium tuberculosis KZN 1435] gi|289555541|ref|ZP_06444751.1| DNA methylase [Mycobacterium tuberculosis KZN 605] gi|297635917|ref|ZP_06953697.1| DNA methylase [Mycobacterium tuberculosis KZN 4207] 6 more sequence titles Length=553 Score = 1129 bits (2920), Expect = 0.0, Method: Compositional matrix adjust. Identities = 552/553 (99%), Positives = 552/553 (99%), Gaps = 0/553 (0%) Query 1 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA 60 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA Sbjct 1 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA 60 Query 61 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS 120 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS Sbjct 61 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS 120 Query 121 WDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG 180 WDGVAGNPPYIRFGNWASEQRDPALELMRRV LRPTKLTNAWVPFVVASTTLARDGGRVG Sbjct 121 WDGVAGNPPYIRFGNWASEQRDPALELMRRVSLRPTKLTNAWVPFVVASTTLARDGGRVG 180 Query 181 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT 240 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT Sbjct 181 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT 240 Query 241 VRLGDANDLNALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL 300 VRLGDANDLNALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL Sbjct 241 VRLGDANDLNALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL 300 Query 301 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR 360 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR Sbjct 301 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR 360 Query 361 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP 420 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP Sbjct 361 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP 420 Query 421 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE 480 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE Sbjct 421 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE 480 Query 481 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL Sbjct 481 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 Query 541 TLRDRRTKRGSRR 553 TLRDRRTKRGSRR Sbjct 541 TLRDRRTKRGSRR 553 >gi|289747081|ref|ZP_06506459.1| DNA methylase [Mycobacterium tuberculosis 02_1987] gi|289759404|ref|ZP_06518782.1| DNA methylase [Mycobacterium tuberculosis T85] gi|289687609|gb|EFD55097.1| DNA methylase [Mycobacterium tuberculosis 02_1987] gi|289714968|gb|EFD78980.1| DNA methylase [Mycobacterium tuberculosis T85] gi|326902509|gb|EGE49442.1| DNA methylase [Mycobacterium tuberculosis W-148] Length=553 Score = 1128 bits (2918), Expect = 0.0, Method: Compositional matrix adjust. Identities = 552/553 (99%), Positives = 552/553 (99%), Gaps = 0/553 (0%) Query 1 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA 60 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA Sbjct 1 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA 60 Query 61 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS 120 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS Sbjct 61 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS 120 Query 121 WDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG 180 WDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG Sbjct 121 WDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG 180 Query 181 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT 240 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT Sbjct 181 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT 240 Query 241 VRLGDANDLNALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL 300 VRLGDANDLNALGDKDFTNESAPALLHEK KWTKYFLDPAQIRLLRGLKQSATMIRLGEL Sbjct 241 VRLGDANDLNALGDKDFTNESAPALLHEKAKWTKYFLDPAQIRLLRGLKQSATMIRLGEL 300 Query 301 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR 360 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR Sbjct 301 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR 360 Query 361 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP 420 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP Sbjct 361 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP 420 Query 421 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE 480 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE Sbjct 421 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE 480 Query 481 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL Sbjct 481 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 Query 541 TLRDRRTKRGSRR 553 TLRDRRTKRGSRR Sbjct 541 TLRDRRTKRGSRR 553 >gi|289444845|ref|ZP_06434589.1| DNA methylase [Mycobacterium tuberculosis T46] gi|289571491|ref|ZP_06451718.1| DNA methylase [Mycobacterium tuberculosis T17] gi|289751957|ref|ZP_06511335.1| DNA methylase [Mycobacterium tuberculosis T92] gi|289417764|gb|EFD15004.1| DNA methylase [Mycobacterium tuberculosis T46] gi|289545245|gb|EFD48893.1| DNA methylase [Mycobacterium tuberculosis T17] gi|289692544|gb|EFD59973.1| DNA methylase [Mycobacterium tuberculosis T92] Length=553 Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 552/553 (99%), Positives = 552/553 (99%), Gaps = 0/553 (0%) Query 1 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA 60 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA Sbjct 1 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA 60 Query 61 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS 120 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS Sbjct 61 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS 120 Query 121 WDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG 180 WDGVAGNPPYIRFGN ASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG Sbjct 121 WDGVAGNPPYIRFGNRASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG 180 Query 181 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT 240 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT Sbjct 181 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT 240 Query 241 VRLGDANDLNALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL 300 VRLGDANDLNALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL Sbjct 241 VRLGDANDLNALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL 300 Query 301 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR 360 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR Sbjct 301 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR 360 Query 361 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP 420 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP Sbjct 361 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP 420 Query 421 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE 480 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE Sbjct 421 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE 480 Query 481 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL Sbjct 481 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 Query 541 TLRDRRTKRGSRR 553 TLRDRRTKRGSRR Sbjct 541 TLRDRRTKRGSRR 553 >gi|340628241|ref|YP_004746693.1| putative DNA methylase [Mycobacterium canettii CIPT 140010059] gi|340006431|emb|CCC45613.1| putative DNA methylase (modification methylase) (methyltransferase) [Mycobacterium canettii CIPT 140010059] Length=553 Score = 1124 bits (2908), Expect = 0.0, Method: Compositional matrix adjust. Identities = 550/553 (99%), Positives = 552/553 (99%), Gaps = 0/553 (0%) Query 1 MQPSHPTRPGAVIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA 60 MQPSHPTRPGAVIRYVGSS DTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA Sbjct 1 MQPSHPTRPGAVIRYVGSSPDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQA 60 Query 61 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS 120 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS Sbjct 61 GPKILEPSCGDGRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGS 120 Query 121 WDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG 180 WDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG Sbjct 121 WDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVG 180 Query 181 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRT 240 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDG+LQEVVLFCGVVGPGPAHIRT Sbjct 181 LVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGVLQEVVLFCGVVGPGPAHIRT 240 Query 241 VRLGDANDLNALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL 300 VRLGDANDL+ALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL Sbjct 241 VRLGDANDLSALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGEL 300 Query 301 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR 360 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR Sbjct 301 ADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHR 360 Query 361 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP 420 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP Sbjct 361 TWLLDAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP 420 Query 421 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE 480 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE Sbjct 421 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE 480 Query 481 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL Sbjct 481 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 Query 541 TLRDRRTKRGSRR 553 TLRDRRTKRGSRR Sbjct 541 TLRDRRTKRGSRR 553 >gi|308232399|ref|ZP_07415929.2| DNA methylase [Mycobacterium tuberculosis SUMu001] gi|308370208|ref|ZP_07420651.2| DNA methylase [Mycobacterium tuberculosis SUMu002] gi|308371293|ref|ZP_07424458.2| DNA methylase [Mycobacterium tuberculosis SUMu003] 18 more sequence titles Length=529 Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 529/529 (100%), Positives = 529/529 (100%), Gaps = 0/529 (0%) Query 25 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH 84 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH Sbjct 1 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH 60 Query 85 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 144 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA Sbjct 61 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 120 Query 145 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 204 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY Sbjct 121 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 180 Query 205 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPA 264 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPA Sbjct 181 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPA 240 Query 265 LLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQA 324 LLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQA Sbjct 241 LLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQA 300 Query 325 LGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEA 384 LGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEA Sbjct 301 LGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEA 360 Query 385 AGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPNV 444 AGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPNV Sbjct 361 AGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPNV 420 Query 445 DPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLLL 504 DPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLLL Sbjct 421 DPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLLL 480 Query 505 KANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGSRR 553 KANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGSRR Sbjct 481 KANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGSRR 529 >gi|339296090|gb|AEJ48201.1| DNA methylase [Mycobacterium tuberculosis CCDC5079] gi|339299701|gb|AEJ51811.1| DNA methylase [Mycobacterium tuberculosis CCDC5180] Length=529 Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/529 (99%), Positives = 528/529 (99%), Gaps = 0/529 (0%) Query 25 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH 84 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH Sbjct 1 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH 60 Query 85 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 144 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA Sbjct 61 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 120 Query 145 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 204 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY Sbjct 121 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 180 Query 205 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPA 264 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPA Sbjct 181 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPA 240 Query 265 LLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQA 324 LLHEK KWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQA Sbjct 241 LLHEKAKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQA 300 Query 325 LGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEA 384 LGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEA Sbjct 301 LGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEA 360 Query 385 AGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPNV 444 AGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPNV Sbjct 361 AGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPNV 420 Query 445 DPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLLL 504 DPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLLL Sbjct 421 DPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLLL 480 Query 505 KANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGSRR 553 KANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGSRR Sbjct 481 KANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGSRR 529 >gi|294993796|ref|ZP_06799487.1| putative DNA methylase [Mycobacterium tuberculosis 210] Length=531 Score = 1054 bits (2726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/523 (99%), Positives = 518/523 (99%), Gaps = 0/523 (0%) Query 31 KTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDHAHGVEL 90 + ADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDHAHGVEL Sbjct 9 QNGCVADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDHAHGVEL 68 Query 91 VAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPALELMRR 150 VAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPALELMRR Sbjct 69 VAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPALELMRR 128 Query 151 VGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRYREITLV 210 VGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRYREITLV Sbjct 129 VGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRYREITLV 188 Query 211 TFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPALLHEKE 270 TFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPALLHEK Sbjct 189 TFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPALLHEKA 248 Query 271 KWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQALGLRAH 330 KWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQALGLRAH Sbjct 249 KWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQALGLRAH 308 Query 331 CVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEAAGVHLG 390 CVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEAAGVHLG Sbjct 309 CVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEAAGVHLG 368 Query 391 YKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPNVDPATLA 450 YKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPNVDPATLA Sbjct 369 YKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPNVDPATLA 428 Query 451 AVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLLLKANEID 510 AVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLLLKANEID Sbjct 429 AVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLLLKANEID 488 Query 511 KALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGSRR 553 KALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGSRR Sbjct 489 KALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGSRR 531 >gi|15827322|ref|NP_301585.1| DNA methylase [Mycobacterium leprae TN] gi|221229800|ref|YP_002503216.1| putative DNA methylase [Mycobacterium leprae Br4923] gi|13092871|emb|CAC30265.1| probable DNA methylase [Mycobacterium leprae] gi|219932907|emb|CAR70850.1| probable DNA methylase [Mycobacterium leprae Br4923] Length=555 Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/541 (82%), Positives = 474/541 (88%), Gaps = 0/541 (0%) Query 12 VIRYVGSSLDTCPMTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGD 71 VI Y+G++ DTC MTTFAGKTAASADKVRGGYYTP VARFLA WV QAG KILEPSCGD Sbjct 2 VITYIGAAPDTCSMTTFAGKTAASADKVRGGYYTPAPVARFLARWVRQAGQKILEPSCGD 61 Query 72 GRILRELSAITDHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYI 131 GRILRE++A+T AHGVEL+A EA+KSR F SVDTEN FTWL KTQ+GSWDGVAGNPPYI Sbjct 62 GRILREIAALTTQAHGVELLAHEARKSRKFCSVDTENFFTWLSKTQVGSWDGVAGNPPYI 121 Query 132 RFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVT 191 RFGNWA++QRDPALELMR VGLRPTKLTNAWVPFVVASTTL RDGGRVGLVVPAELLQVT Sbjct 122 RFGNWAADQRDPALELMRHVGLRPTKLTNAWVPFVVASTTLVRDGGRVGLVVPAELLQVT 181 Query 192 YAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNA 251 YAAQLREFLLS YREI LVTFERLVFDGILQEVVLFCGVVG GPA IRT+ L DA LN+ Sbjct 182 YAAQLREFLLSLYREIILVTFERLVFDGILQEVVLFCGVVGAGPAQIRTINLRDAESLNS 241 Query 252 LGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGR 311 L + + ESAPALLHEKEKWTKY LDPAQIRLLR LK + M R GE+ADVDVGIVTGR Sbjct 242 LAESNLGVESAPALLHEKEKWTKYLLDPAQIRLLRKLKHANAMTRFGEVADVDVGIVTGR 301 Query 312 NSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPT 371 NSFFTFTDA A AL LR HCVPLVSRS QL+G++YD +CRA D+A HRTWLLDA +PT Sbjct 302 NSFFTFTDADAHALKLRKHCVPLVSRSTQLAGIVYDTNCRANDIAAKHRTWLLDAPHHPT 361 Query 372 DPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATS 431 D ALV HI AG+ AGV GYKCSIRKPWWSTPSLW+PDLFMLRQIH APRLTVNAAAATS Sbjct 362 DSALVTHIDAGKRAGVDKGYKCSIRKPWWSTPSLWIPDLFMLRQIHLAPRLTVNAAAATS 421 Query 432 TDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAY 491 TDTVHRVRL +VDP LAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLP+PPPAY Sbjct 422 TDTVHRVRLIADVDPTALAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPIPPPAY 481 Query 492 GSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGS 551 S EL QD+DLLLKANEI+KALD+VDR VLIDGLGLSP LVA CR AW +LRDRRTKRGS Sbjct 482 ASTELGQDIDLLLKANEIEKALDIVDRRVLIDGLGLSPDLVAQCRTAWASLRDRRTKRGS 541 Query 552 R 552 R Sbjct 542 R 542 >gi|240172506|ref|ZP_04751165.1| putative DNA methylase [Mycobacterium kansasii ATCC 12478] Length=525 Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/518 (80%), Positives = 449/518 (87%), Gaps = 3/518 (0%) Query 25 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH 84 MTTFAGK AASA+KVRGGYYTPPAVARFLA WV +AGP+ILEPSCGDGRILREL+A+T Sbjct 1 MTTFAGKAAASAEKVRGGYYTPPAVARFLARWVCEAGPRILEPSCGDGRILRELAALTSQ 60 Query 85 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 144 AHGVELVA EA KSR+FA VD +N FTWLH + GSWDG+AGNPPYIRFGNWAS+QR+PA Sbjct 61 AHGVELVAAEAGKSREFACVDVDNFFTWLHTARPGSWDGIAGNPPYIRFGNWASDQREPA 120 Query 145 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 204 LELMR GLRPTKLTNAWVPFVVASTTL R+GGRVGLVVPAELLQV YAAQLR+FL+S Y Sbjct 121 LELMRSAGLRPTKLTNAWVPFVVASTTLVREGGRVGLVVPAELLQVGYAAQLRDFLVSHY 180 Query 205 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPA 264 REIT+VTFERLVFDG+LQEVVLFCGVVG GPA +RTV L DA LG T E+APA Sbjct 181 REITVVTFERLVFDGVLQEVVLFCGVVGAGPARVRTVNLADAG---GLGAASLTGETAPA 237 Query 265 LLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQA 324 LLHEKEKWT YFLDP QI LLR L++S TM+RL +LA VDVGIVTGRNSFFTFTDA+A A Sbjct 238 LLHEKEKWTTYFLDPPQIELLRALRRSGTMVRLRDLAQVDVGIVTGRNSFFTFTDAEAGA 297 Query 325 LGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEA 384 LGLR HCV LVSRSAQLSGL+YDEDCRA DVA HRTWLL+A P D A+ AHI AGEA Sbjct 298 LGLRQHCVALVSRSAQLSGLVYDEDCRASDVAAGHRTWLLNAPTTPADAAVAAHIAAGEA 357 Query 385 AGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPNV 444 AGV LGYKCSIR PWW TPSLW+PDLFMLRQIH APRLTVNAAAATSTDTVHRVR+DP V Sbjct 358 AGVQLGYKCSIRTPWWRTPSLWIPDLFMLRQIHHAPRLTVNAAAATSTDTVHRVRVDPTV 417 Query 445 DPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLLL 504 DPA LAA FHNS TFAFAEIMGRSYGGG+LELEP EAE LP+PPPAY S ELA+DVDLLL Sbjct 418 DPARLAAAFHNSVTFAFAEIMGRSYGGGVLELEPGEAELLPVPPPAYTSTELARDVDLLL 477 Query 505 KANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTL 542 KANE++KALD+VDRHVLI+ LGLS LVA CRAAW TL Sbjct 478 KANEMEKALDIVDRHVLIERLGLSADLVASCRAAWSTL 515 >gi|183981301|ref|YP_001849592.1| DNA methylase [Mycobacterium marinum M] gi|183174627|gb|ACC39737.1| DNA methylase [Mycobacterium marinum M] Length=528 Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/531 (77%), Positives = 443/531 (84%), Gaps = 6/531 (1%) Query 25 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH 84 M TFAGKTAASADKVRGGYYTP VARFLA WV +AG KILEPSCGDGRIL EL+A + Sbjct 1 MKTFAGKTAASADKVRGGYYTPAPVARFLARWVGRAGTKILEPSCGDGRILAELAAASGS 60 Query 85 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 144 A GVEL+A EA K+R FA VD NLFTWL ++ G WDGVAGNPPYIRFGNW ++QRDPA Sbjct 61 ARGVELIADEAAKARRFAPVDHTNLFTWLDESATGRWDGVAGNPPYIRFGNWPADQRDPA 120 Query 145 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 204 LELMR+VGL PT+LTNAWVPFVVAST + RDGGRVGLV+PAELLQV YA QLREFLL+R+ Sbjct 121 LELMRQVGLNPTRLTNAWVPFVVASTIVVRDGGRVGLVLPAELLQVGYAGQLREFLLNRF 180 Query 205 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPA 264 REITLVTF+RLVFDG+LQEVVLFCGVVG A IRTV LGDA +AL D E A A Sbjct 181 REITLVTFDRLVFDGVLQEVVLFCGVVGSDAAQIRTVNLGDA---DALATADLEVEPAAA 237 Query 265 LLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQA 324 LLHE EKWTKYFLDP QI+ +R LKQ MIRLG +ADV+VGIVTGRNSFFTFTD A+ Sbjct 238 LLHENEKWTKYFLDPRQIQTMRALKQCDAMIRLGAVADVNVGIVTGRNSFFTFTDTVARQ 297 Query 325 LGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEA 384 LGL AHCVPLVSRSAQL GL+YD DCRA D+A +HRTWLLDA P DPAL+AHI AGEA Sbjct 298 LGLAAHCVPLVSRSAQLRGLVYDPDCRASDIAADHRTWLLDAPADPADPALIAHIDAGEA 357 Query 385 AGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLD--- 441 AGVHLGYKCSIRKPWWSTPSLW+PDLFMLRQIH PRL+VN+AAATSTDTVHRVR+ Sbjct 358 AGVHLGYKCSIRKPWWSTPSLWVPDLFMLRQIHRTPRLSVNSAAATSTDTVHRVRIKTAG 417 Query 442 PNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVD 501 P VDP LA FHNS TFAFAEIMGRSYGGGILELEPREAE LP+PPP AELA DVD Sbjct 418 PRVDPTALAVAFHNSVTFAFAEIMGRSYGGGILELEPREAELLPIPPPTRAGAELATDVD 477 Query 502 LLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGSR 552 LLLKA+EIDKALD+VDRHVLI LG++P VA CR+AW+TLRDRR KRGSR Sbjct 478 LLLKADEIDKALDLVDRHVLIGELGMAPDAVARCRSAWMTLRDRRIKRGSR 528 >gi|342861466|ref|ZP_08718113.1| BpmI methyltransferase [Mycobacterium colombiense CECT 3035] gi|342130955|gb|EGT84244.1| BpmI methyltransferase [Mycobacterium colombiense CECT 3035] Length=527 Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/518 (77%), Positives = 433/518 (84%), Gaps = 6/518 (1%) Query 28 FAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDHAHG 87 FAGK AASADKVRGGYYTP VARFLA WV AGP+I+EPSCGDG ILREL++++D A G Sbjct 3 FAGKAAASADKVRGGYYTPAPVARFLAAWVRAAGPRIVEPSCGDGAILRELASLSDQARG 62 Query 88 VELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPALEL 147 VEL+A EA KSR FA VD E+LF WL + G WDGVAGNPPYIRFGNW+S QRDPAL+L Sbjct 63 VELIADEAAKSRRFAPVDAESLFAWLATAEAGGWDGVAGNPPYIRFGNWSSRQRDPALDL 122 Query 148 MRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRYREI 207 MRR GLRPT+LTNAWVPFVVAST LARDGGRVGLV+PAELLQV YAAQLR+FLLSR+REI Sbjct 123 MRREGLRPTRLTNAWVPFVVASTVLARDGGRVGLVLPAELLQVGYAAQLRDFLLSRFREI 182 Query 208 TLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNES---APA 264 TL+TFERLVFDGILQEVVLFCGVVG GPA IRTV L DA+ AL D E PA Sbjct 183 TLLTFERLVFDGILQEVVLFCGVVGAGPARIRTVHLADAD---ALTQTDLGVEHTAFGPA 239 Query 265 LLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQA 324 LLHE EKWTKYFLDPA IRLLR L+ S + RLG +A+VDVGIVTGRN+FFTFTDA+A Sbjct 240 LLHENEKWTKYFLDPAAIRLLRALRSSGALTRLGSVAEVDVGIVTGRNAFFTFTDAQAGE 299 Query 325 LGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEA 384 LGLR HCVPLV+RSAQLSGL+YD DCRA D+A R WLL+A P DP L AHI AGEA Sbjct 300 LGLRPHCVPLVARSAQLSGLVYDTDCRATDLAAGQRGWLLNAPREPADPELRAHIRAGEA 359 Query 385 AGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPNV 444 AGVH GYKCSIR PWW+TPSLW+PDLF+LRQIH APRLTVNAAAATSTDTVHRVRL V Sbjct 360 AGVHRGYKCSIRTPWWTTPSLWVPDLFLLRQIHRAPRLTVNAAAATSTDTVHRVRLTARV 419 Query 445 DPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLLL 504 +PA LAA FHNS TFAF EIMGRSYGGG+LELEPREAEQLP+PPPA+ AELA DVDLLL Sbjct 420 EPAALAAAFHNSVTFAFTEIMGRSYGGGVLELEPREAEQLPIPPPAHADAELACDVDLLL 479 Query 505 KANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTL 542 KANEI+KALDVVDR VLIDGLG+ VA CRAAW++L Sbjct 480 KANEIEKALDVVDRRVLIDGLGMPAEAVADCRAAWVSL 517 >gi|41409474|ref|NP_962310.1| hypothetical protein MAP3376 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398305|gb|AAS05926.1| hypothetical protein MAP_3376 [Mycobacterium avium subsp. paratuberculosis K-10] Length=526 Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/519 (77%), Positives = 429/519 (83%), Gaps = 4/519 (0%) Query 25 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH 84 MTTFAGK AASADKVRGGYYTP VARFLAHWV +AGP+I+EPSCGDG ILREL+ ++D Sbjct 1 MTTFAGKAAASADKVRGGYYTPAPVARFLAHWVRRAGPRIVEPSCGDGAILRELARLSDR 60 Query 85 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 144 HGVEL+ EA K+R FA V E+LF+WL + G WDGVAGNPPYIRFGNWAS QRDPA Sbjct 61 VHGVELIPHEAAKARRFAPVSAESLFSWLATAEDGGWDGVAGNPPYIRFGNWASPQRDPA 120 Query 145 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 204 L L+RR GLRPT+LTNAWVPFVVA T L RDGGRVGLV+PAELLQV YAAQLREFLLSR+ Sbjct 121 LALLRREGLRPTRLTNAWVPFVVAGTVLVRDGGRVGLVLPAELLQVGYAAQLREFLLSRF 180 Query 205 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTN-ESAP 263 R+ITL+TFERLVFDG+LQEVVLFCGVVG GPA IRTV L A+ AL D D SAP Sbjct 181 RDITLLTFERLVFDGVLQEVVLFCGVVGTGPARIRTVTLAGAD---ALADIDVERLASAP 237 Query 264 ALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQ 323 ALLHE EKWTKYFLDPA I LLR LK SAT+ RLG LA+VDVGIVTGRN+FFTFTD + Sbjct 238 ALLHEHEKWTKYFLDPAAIELLRALKASATLTRLGALAEVDVGIVTGRNAFFTFTDEQVT 297 Query 324 ALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGE 383 ALGLR HCVPLVSRSAQLSGLIYD DCRA D+A R WLL+A P DPAL AHI AGE Sbjct 298 ALGLRRHCVPLVSRSAQLSGLIYDTDCRASDLAARQRGWLLNAPREPADPALTAHIRAGE 357 Query 384 AAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPN 443 AAGVH GYKCSIR PWWSTPSLW PDLF+LRQIH APRLTVNAA TSTDTVHRVR+ P Sbjct 358 AAGVHRGYKCSIRTPWWSTPSLWQPDLFLLRQIHAAPRLTVNAAGPTSTDTVHRVRVGPG 417 Query 444 VDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLL 503 VDPA LAAVFHNS TFAFAEIMGRSYGGG+LELEPREAEQLP+P P A+L DVDLL Sbjct 418 VDPAALAAVFHNSVTFAFAEIMGRSYGGGVLELEPREAEQLPLPRPECADADLVGDVDLL 477 Query 504 LKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTL 542 LKA E+DKALDVVDR VLID LG+ PR VA CRAAW L Sbjct 478 LKAGELDKALDVVDRRVLIDALGVPPRAVADCRAAWACL 516 >gi|336459661|gb|EGO38596.1| adenine-specific DNA methylase [Mycobacterium avium subsp. paratuberculosis S397] Length=526 Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/519 (77%), Positives = 429/519 (83%), Gaps = 4/519 (0%) Query 25 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH 84 MTTFAGK AASADKVRGGYYTP VARFLAHWV +AGP+I+EPSCGDG ILREL+ ++D Sbjct 1 MTTFAGKAAASADKVRGGYYTPAPVARFLAHWVRRAGPRIVEPSCGDGAILRELARLSDR 60 Query 85 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 144 HGVEL+ EA K+R FA V E+LF+WL + G WDGVAGNPPYIRFGNWAS QRDPA Sbjct 61 VHGVELIPHEAAKARRFAPVSAESLFSWLATAEDGGWDGVAGNPPYIRFGNWASPQRDPA 120 Query 145 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 204 L L+RR GLRPT+LTNAWVPFVVA T L RDGGRVGLV+PAELLQV YAAQLREFLLSR+ Sbjct 121 LALLRREGLRPTRLTNAWVPFVVAGTVLVRDGGRVGLVLPAELLQVGYAAQLREFLLSRF 180 Query 205 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTN-ESAP 263 R+ITL+TFERLVFDG+LQEVVLFCGVVG GPA IRTV L A+ AL D D SAP Sbjct 181 RDITLLTFERLVFDGVLQEVVLFCGVVGTGPARIRTVTLAGAD---ALADIDVERLASAP 237 Query 264 ALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQ 323 ALLHE EKWTKYFLDPA I LLR LK SAT+ RLG LA+VDVGIVTGRN+FFTFTD + Sbjct 238 ALLHEHEKWTKYFLDPAAIELLRALKASATLTRLGALAEVDVGIVTGRNAFFTFTDEQVT 297 Query 324 ALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGE 383 ALGLR HCVPLVSRSAQLSGLIY+ DCRA D+A R WLL+A P DPAL AHI AGE Sbjct 298 ALGLRRHCVPLVSRSAQLSGLIYNTDCRASDLAARQRGWLLNAPREPADPALTAHIRAGE 357 Query 384 AAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPN 443 AAGVH GYKCSIR PWWSTPSLW PDLF+LRQIH APRLTVNAA TSTDTVHRVR+ P Sbjct 358 AAGVHRGYKCSIRTPWWSTPSLWQPDLFLLRQIHAAPRLTVNAAGPTSTDTVHRVRVGPG 417 Query 444 VDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLL 503 VDPA LAAVFHNS TFAFAEIMGRSYGGG+LELEPREAEQLP+P P A+L DVDLL Sbjct 418 VDPAALAAVFHNSVTFAFAEIMGRSYGGGVLELEPREAEQLPLPRPECADADLVGDVDLL 477 Query 504 LKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTL 542 LKA E+DKALDVVDR VLID LG+ PR VA CRAAW L Sbjct 478 LKAGELDKALDVVDRRVLIDALGVPPRAVADCRAAWACL 516 >gi|118462723|ref|YP_883367.1| BpmI methyltransferase [Mycobacterium avium 104] gi|118164010|gb|ABK64907.1| BpmI methyltransferase [Mycobacterium avium 104] Length=526 Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/519 (77%), Positives = 429/519 (83%), Gaps = 4/519 (0%) Query 25 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH 84 MTTFAGK AASADKVRGGYYTP VARFL+ WV +AGP+I+EPSCGDG ILREL+ ++D Sbjct 1 MTTFAGKAAASADKVRGGYYTPAPVARFLSRWVRRAGPRIVEPSCGDGAILRELARLSDR 60 Query 85 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 144 HGVEL+ EA K+R FA V E+LF+WL + G WDGVAGNPPYIRFGNWAS QRDPA Sbjct 61 VHGVELIPHEAAKARRFAPVSAESLFSWLATAEDGGWDGVAGNPPYIRFGNWASPQRDPA 120 Query 145 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 204 L L+RR GLRPT+LTNAWVPFVVA T L RDGGRVGLV+PAELLQV YAAQLREFLLSR+ Sbjct 121 LALLRREGLRPTRLTNAWVPFVVAGTVLVRDGGRVGLVLPAELLQVGYAAQLREFLLSRF 180 Query 205 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTN-ESAP 263 R+ITL+TFERLVFDG+LQEVVLFCGVVG GPA IRTV L A+ AL D D SAP Sbjct 181 RDITLLTFERLVFDGVLQEVVLFCGVVGTGPARIRTVTLAGAD---ALADIDVERLASAP 237 Query 264 ALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQ 323 ALLHE EKWTKYFLDPA I LLR LK SAT+ RLG LA+VDVGIVTGRN+FFTFTD + Sbjct 238 ALLHEHEKWTKYFLDPAAIELLRALKASATLTRLGALAEVDVGIVTGRNAFFTFTDEQVT 297 Query 324 ALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGE 383 ALGLR HCVPLVSRSAQLSGLIYD DCRA D+A R WLL+A P DPAL AHI AGE Sbjct 298 ALGLRRHCVPLVSRSAQLSGLIYDTDCRASDLAAGQRGWLLNAPRKPADPALTAHIRAGE 357 Query 384 AAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPN 443 AAGVH GYKCSIR PWWSTPSLW PDLF+LRQIH APRLTVNAA ATSTDTVHRVR+ P Sbjct 358 AAGVHRGYKCSIRTPWWSTPSLWQPDLFLLRQIHAAPRLTVNAAGATSTDTVHRVRVGPG 417 Query 444 VDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLL 503 VDPA LAAVFHNS TFAFAEIMGRSYGGG+LELEPREAEQLP+P P A+L DVDLL Sbjct 418 VDPAALAAVFHNSVTFAFAEIMGRSYGGGVLELEPREAEQLPLPRPECADADLVGDVDLL 477 Query 504 LKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTL 542 LKA E+DKALDVVDR VLID LG+ PR VA CRAAW L Sbjct 478 LKAGELDKALDVVDRRVLIDALGVPPRAVADCRAAWACL 516 >gi|118618078|ref|YP_906410.1| DNA methylase [Mycobacterium ulcerans Agy99] gi|118570188|gb|ABL04939.1| DNA methylase [Mycobacterium ulcerans Agy99] Length=528 Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/531 (76%), Positives = 438/531 (83%), Gaps = 6/531 (1%) Query 25 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH 84 M TFAGKTAASADKVRGGYYTP V RFLA WV +AG KILEPSCGDGRIL EL+A + Sbjct 1 MKTFAGKTAASADKVRGGYYTPAPVVRFLARWVGRAGTKILEPSCGDGRILAELAAASGS 60 Query 85 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 144 A GVEL+A EA K+R FA VD NLFTWL ++ G WDGVAGNPPYIRFGNW ++QRDPA Sbjct 61 ARGVELIADEAAKARRFAPVDNTNLFTWLDESATGRWDGVAGNPPYIRFGNWPADQRDPA 120 Query 145 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 204 LELMR+VGL PT+LTNAWVPFVVAST + RDGGRVGLV+PAELLQV YA QLREFLL+R+ Sbjct 121 LELMRQVGLNPTRLTNAWVPFVVASTIVVRDGGRVGLVLPAELLQVGYAGQLREFLLNRF 180 Query 205 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPA 264 REITLVTF+RLVFDG+LQEVVLFC VG A IRTV LGDA +AL D E A A Sbjct 181 REITLVTFDRLVFDGVLQEVVLFCSDVGSDAAQIRTVNLGDA---DALATADLEVEPAAA 237 Query 265 LLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQA 324 L HE EKWTKYFLDP QI+ +R LKQ MIRLG +ADV+VGIVTGRNSFFTFTD A+ Sbjct 238 LRHENEKWTKYFLDPRQIQTMRALKQCDAMIRLGAVADVNVGIVTGRNSFFTFTDTVARQ 297 Query 325 LGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEA 384 LGL AHCVPLVSRSAQL GL+YD DCRA D+A +HRTWLLDA P DPAL+AHI AGEA Sbjct 298 LGLAAHCVPLVSRSAQLRGLVYDPDCRASDIAADHRTWLLDAPADPADPALIAHIDAGEA 357 Query 385 AGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLD--- 441 AGVHLGYKCSIRKPWWSTPSLW+PDLFMLRQIH PRL+VN+AAATSTDTVHRVR+ Sbjct 358 AGVHLGYKCSIRKPWWSTPSLWVPDLFMLRQIHRTPRLSVNSAAATSTDTVHRVRIKTAG 417 Query 442 PNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVD 501 P VDP LA FHNS TFAFAEIM RSYGGGILELEPREAE LP+PPP AELA DVD Sbjct 418 PRVDPTALAVAFHNSVTFAFAEIMDRSYGGGILELEPREAELLPIPPPTRAGAELATDVD 477 Query 502 LLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGSR 552 LLLKA+EIDKALD+VDRHVLI LG++P VA CR+AW+TLRDRR KRGSR Sbjct 478 LLLKADEIDKALDLVDRHVLIGELGMAPDAVARCRSAWMTLRDRRIKRGSR 528 >gi|254776662|ref|ZP_05218178.1| BpmI methyltransferase [Mycobacterium avium subsp. avium ATCC 25291] Length=526 Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/519 (76%), Positives = 426/519 (83%), Gaps = 4/519 (0%) Query 25 MTTFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDH 84 MTTFAGK AASADKVRGGYYTP VARFLA WV +AGP+I+EPSCGDG ILREL+ ++D Sbjct 1 MTTFAGKAAASADKVRGGYYTPAPVARFLARWVRRAGPRIVEPSCGDGAILRELARLSDR 60 Query 85 AHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 144 HGVEL+ EA K+R FA V E+LF+WL + G WDGVAGNPPYIRFGNWAS QRDPA Sbjct 61 VHGVELIPHEAAKARRFAPVSAESLFSWLATAEDGGWDGVAGNPPYIRFGNWASPQRDPA 120 Query 145 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 204 L L+RR GLRPT+LTNAWVPFVVA T L RDGGRVGLV+ AELLQV YAAQLREFLLSR+ Sbjct 121 LALLRREGLRPTRLTNAWVPFVVAGTVLVRDGGRVGLVLSAELLQVGYAAQLREFLLSRF 180 Query 205 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTN-ESAP 263 R+ITL+TFERLVFDG+LQEVVLFCGVVG GPA IRTV L A+ AL D D SAP Sbjct 181 RDITLLTFERLVFDGVLQEVVLFCGVVGTGPARIRTVTLAGAD---ALADIDVERLASAP 237 Query 264 ALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQ 323 ALLHE EKWTKYFLDPA I LLR LK SAT+ RLG LA+VDVGIVTGRN+FFTFTD + Sbjct 238 ALLHEHEKWTKYFLDPAAIELLRALKASATLTRLGALAEVDVGIVTGRNAFFTFTDEQVT 297 Query 324 ALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGE 383 ALGLR HCVPLVSRSAQLSGLIYD DCRA D+A R WLL+A P DPAL AHI AGE Sbjct 298 ALGLRRHCVPLVSRSAQLSGLIYDTDCRASDLAAGQRGWLLNAPREPADPALTAHIRAGE 357 Query 384 AAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPN 443 AAGVH GYKCSIR PWWSTPSLW PDLF+LRQIH APRLTVNAA ATS DTVHRVR+ P Sbjct 358 AAGVHRGYKCSIRTPWWSTPSLWQPDLFLLRQIHAAPRLTVNAAGATSIDTVHRVRVGPG 417 Query 444 VDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLL 503 V PA LAAVFHNS TFAFAEIMGRSYGGG+LELEPREAEQLP+P P A+L DVDLL Sbjct 418 VVPAALAAVFHNSVTFAFAEIMGRSYGGGVLELEPREAEQLPLPRPECADADLVGDVDLL 477 Query 504 LKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTL 542 LKA E+DKALDVVDR VLID LG+ PR VA CRAAW L Sbjct 478 LKAGELDKALDVVDRRVLIDALGVPPRAVADCRAAWACL 516 >gi|254821365|ref|ZP_05226366.1| hypothetical protein MintA_15617 [Mycobacterium intracellulare ATCC 13950] Length=532 Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/535 (75%), Positives = 439/535 (83%), Gaps = 13/535 (2%) Query 27 TFAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDHAH 86 FAGK AASADKVRGGYYTP VARFLA+WV +AGPKI+EPSCGDG ILREL+A++D AH Sbjct 2 NFAGKAAASADKVRGGYYTPAPVARFLANWVREAGPKIVEPSCGDGAILRELAALSDRAH 61 Query 87 GVELVAREAKKSRDFASVDTENLFTWLHKTQLGS---WDGVAGNPPYIRFGNWASEQRDP 143 GVEL+AREA K+R FA VDT++LFTW+ + WDGVAGNPPYIRFGNWAS+ RDP Sbjct 62 GVELIAREATKARRFAPVDTDSLFTWMARAAEAGAGGWDGVAGNPPYIRFGNWASQHRDP 121 Query 144 ALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSR 203 ALELMRR GLRPT+LTNAWVPFVVA+T L RDGGRVGLV+PAELLQV+YAA LR+FL+SR Sbjct 122 ALELMRREGLRPTRLTNAWVPFVVAATLLVRDGGRVGLVLPAELLQVSYAAPLRDFLVSR 181 Query 204 YREITLVTFERLVFDGILQEVVLFCGVV---GPGPAHIRTVRLGDANDLNALGDKDFTNE 260 +R+ITL+TF+RLVFDGILQEVVLFCGV G GPA IRTV L DA +AL D Sbjct 182 FRDITLLTFQRLVFDGILQEVVLFCGVRDTGGSGPARIRTVHLPDA---DALARADLDAG 238 Query 261 SAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDA 320 APALLHE EKWTKYFLDPA IRLLR LK S ++ LG +A+VDVGIVTGRN+FFT TDA Sbjct 239 WAPALLHENEKWTKYFLDPAAIRLLRALKGSGALLPLGSVAEVDVGIVTGRNAFFTLTDA 298 Query 321 KAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHIT 380 +A LGLR HCVPLVSRSAQLSGL+YD DCRA D+A HR WLL+A P DPAL+AHI Sbjct 299 QAAELGLRPHCVPLVSRSAQLSGLVYDTDCRASDLAAEHRGWLLNAPREPADPALIAHIR 358 Query 381 AGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRL 440 AGEAAGVH GYKCSIR PWW TPSLW PDLF+LRQIH APRLTVN A STDTVHRVRL Sbjct 359 AGEAAGVHRGYKCSIRTPWWRTPSLWAPDLFLLRQIHRAPRLTVNGVGAVSTDTVHRVRL 418 Query 441 ---DPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELA 497 DP VDPA LAAVFHNS TFAFAEIMGRSYGGG+LELEPREAEQLP+P PA+ +LA Sbjct 419 SGEDP-VDPAALAAVFHNSVTFAFAEIMGRSYGGGVLELEPREAEQLPIPAPAHADPDLA 477 Query 498 QDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGSR 552 DVDLLLKA EIDKALD+VDR VLIDGLGL VA CR AW +L DRR +RG+R Sbjct 478 VDVDLLLKAGEIDKALDLVDRRVLIDGLGLPAEAVADCRRAWASLADRRKRRGTR 532 >gi|296168942|ref|ZP_06850611.1| DNA (cytosine-5-)-methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896411|gb|EFG76064.1| DNA (cytosine-5-)-methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=524 Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/515 (77%), Positives = 428/515 (84%), Gaps = 3/515 (0%) Query 28 FAGKTAASADKVRGGYYTPPAVARFLAHWVHQAGPKILEPSCGDGRILRELSAITDHAHG 87 FAGK AASA+K RGGYYTP VARFLA WV +AGP+ILEPSCGDG ILREL+ + G Sbjct 3 FAGKAAASAEKARGGYYTPAPVARFLARWVREAGPRILEPSCGDGAILRELARLGGRPRG 62 Query 88 VELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPALEL 147 VELVA EA K+R+FA VD NLFTWL T+ G WDGVAGNPPYIRFGNWA EQRDPALEL Sbjct 63 VELVAEEAAKAREFAPVDAANLFTWLAATEPGEWDGVAGNPPYIRFGNWACEQRDPALEL 122 Query 148 MRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRYREI 207 MRR GLRPT+LTNAWVPFVVAS+ L RDGGRVGLV+PAELLQVTYAA LREFLLSR+R+I Sbjct 123 MRREGLRPTRLTNAWVPFVVASSILVRDGGRVGLVLPAELLQVTYAAPLREFLLSRFRDI 182 Query 208 TLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPALLH 267 TLVTFERLVFDGILQEVVLFCG+ G GPA +RTV L DA+ L A D E+APALLH Sbjct 183 TLVTFERLVFDGILQEVVLFCGLAGAGPARVRTVHLADADALAA---ADLDVEAAPALLH 239 Query 268 EKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQALGL 327 E EKWT+YFLDPA IRLLR LK S M RLG +ADVDVGIVTGRNSFFTFTDA+A+ LGL Sbjct 240 ENEKWTQYFLDPAAIRLLRSLKASTAMTRLGSVADVDVGIVTGRNSFFTFTDAQARELGL 299 Query 328 RAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAGEAAGV 387 HCVPLVSRSAQLSGL+YD DCR DVA R WLL+A P DPAL+AHI AGEAAGV Sbjct 300 LPHCVPLVSRSAQLSGLVYDTDCRTSDVAAGRRGWLLNAPRDPADPALLAHIGAGEAAGV 359 Query 388 HLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPNVDPA 447 H GYKCSIR PWW+TPSLW PDLF+LRQIH APRLTVNAAAATSTDTVHRVRL VD Sbjct 360 HRGYKCSIRTPWWTTPSLWTPDLFLLRQIHLAPRLTVNAAAATSTDTVHRVRLAAGVDAT 419 Query 448 TLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLLLKAN 507 LAAVFHNS TFAFAEI+GRSYGGGILELEPREAEQLP+PPPA LA DVDLLLKA+ Sbjct 420 ALAAVFHNSVTFAFAEIVGRSYGGGILELEPREAEQLPIPPPALAGGGLACDVDLLLKAD 479 Query 508 EIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTL 542 E +KALD+VDRHVLIDGLGL P +VA CRAAW L Sbjct 480 EAEKALDLVDRHVLIDGLGLEPGVVAQCRAAWAAL 514 >gi|21914204|gb|AAM81324.1|AF522187_2 BpmI methyltransferase [Bacillus pumilus] Length=549 Score = 378 bits (971), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 204/544 (38%), Positives = 295/544 (55%), Gaps = 27/544 (4%) Query 34 ASADKVRGGYYTPPAVARFLAHWVHQAGPK-ILEPSCGDGRIL-------RELSAITDHA 85 + K+RGGYYTP +A FL W Q K +LEPSCGDG + +ELS + Sbjct 8 VNLQKLRGGYYTPKVIADFLCQWSIQDDTKSVLEPSCGDGNFIESAILRFKELSIDNEQL 67 Query 86 HG----VELVAREAKKSRDFA--------SVDTENLFTWLHKTQLGSWDGVAGNPPYIRF 133 G VEL+ EA K ++ A S+ + F ++ + +D + GNPP+IR+ Sbjct 68 KGRITGVELIEEEALKVQNRANELGVDKNSIVNSDFFQFVKDNKNKKFDTIIGNPPFIRY 127 Query 134 GNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYA 193 N+ E R A+E+M +GL+P KLTN WVPF+V S TL + G++ +V+PAEL QV YA Sbjct 128 QNFPEEHRSIAMEMMEELGLKPNKLTNIWVPFLVVSATLLNEQGKMAMVIPAELFQVKYA 187 Query 194 AQLREFLLSRYREITLVTFERLVFDGILQEVV-LFCGVVGPGPAHIRTVRLGDANDLNAL 252 A+ R FL + IT++TFE+LVF+ I QEV+ L C IR + + + LN++ Sbjct 188 AETRIFLSKFFDRITIITFEKLVFENIQQEVILLLCEKKVNKGKGIRVIECENLDGLNSI 247 Query 253 GDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRN 312 + + H EKWTKYFL+ +I LL+ LK+ + + +VG+VTGRN Sbjct 248 DFVAINGSNVKPIEHRTEKWTKYFLNEDEILLLQSLKEDKRVKNCNDYFKTEVGLVTGRN 307 Query 313 SFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDED---CRACDVAGNHRTWLLDAADY 369 FF + + + L + +P+ RS QL G+ + E+ + + H +L D+ Sbjct 308 EFFMMKENQVKEWNLEEYTIPVTGRSNQLKGITFTENDFHENSMEQKAIH-LFLPPDEDF 366 Query 370 PTDP-ALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAA 428 P +I GE G H GYK IRK W+ TPS W+PD F LRQ+ P+L +N Sbjct 367 EKLPIECQNYIKYGEEKGFHQGYKTRIRKRWYITPSRWVPDAFALRQVDGYPKLILNETD 426 Query 429 ATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPP 488 A+STDT+HRVR ++ F NS TFA +EI GRSYGGG++ EP E ++ +P Sbjct 427 ASSTDTIHRVRFKEGINEKLAVVSFLNSLTFASSEITGRSYGGGVMTFEPTEIGEILIPS 486 Query 489 PAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTK 548 S + + +D L++ EI+K LD+VD +LI G S + V R W L RR Sbjct 487 FDNLSIDFDK-IDALIREKEIEKVLDIVDEALLIKYHGFSEKEVKQLRGIWKKLSQRRNN 545 Query 549 RGSR 552 R + Sbjct 546 RTKK 549 >gi|344203797|ref|YP_004788940.1| modification methyltransferase [Muricauda ruestringensis DSM 13258] gi|343955719|gb|AEM71518.1| modification methyltransferase [Muricauda ruestringensis DSM 13258] Length=535 Score = 346 bits (887), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 196/536 (37%), Positives = 296/536 (56%), Gaps = 25/536 (4%) Query 34 ASADKVRGGYYTPPAVARFLAHWVHQAGPK--ILEPSCGDGRILRELSA---ITDHAHGV 88 AS +K+RGG+YTP +A F+ W + ILEPSCGDG L E+ + + Sbjct 7 ASEEKLRGGFYTPNPIAAFILKWAFNGNKELEILEPSCGDGVFLEEIQKGGYKYNSVTAI 66 Query 89 ELVAREAKKSRDFASVDTENLFTWLHKTQLGS---WDGVAGNPPYIRFGNWASEQRDPAL 145 E EA+KSR+ D++ + + H + + +D + GNPPYIR+ + +Q+ A Sbjct 67 EFDEVEAEKSRNIGLADSKVIHSDFHDFCINTKKRFDLIIGNPPYIRYQYFDKQQQKFAA 126 Query 146 ELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRYR 205 E+ + L+ +KLTNAWV FVV S+ L ++ G++G V+PAE+LQV+YA LREFL Y Sbjct 127 EIFDKANLKYSKLTNAWVSFVVGSSLLLKEQGKIGFVLPAEILQVSYAQTLREFLAKFYN 186 Query 206 EITLVTFERLVFDGILQEVVLFCGVVGPGPAH-IRTVRLGDANDLNALGDKDFTNESAPA 264 +I +V+FE+LVF I QEVVL H I + L DA +L L D + +P Sbjct 187 KINIVSFEKLVFPDIQQEVVLLLCEKNNSKTHLIEHLELRDAEELQNL---DVSRLKSPK 243 Query 265 --LLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKA 322 + + KWT YFLD +I L L+++ + +LG+ A V+VGI TG N FFT + Sbjct 244 KRIDFKSNKWTFYFLDQKEIDFLERLQENQQIQKLGKYAKVEVGITTGSNPFFTVPLSTV 303 Query 323 QALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVA----- 377 Q L + PLV RS Q+ I+ + + A RT LL +P L Sbjct 304 QFYDLEKYAKPLVGRSVQVPSAIFTQKDWQKNRAMEARTHLLT---FPKKNDLNGSLGAR 360 Query 378 -HITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVH 436 +I GE ++ GYKC IR W PSL + D +R+ + P+L +N A A +TDT+H Sbjct 361 DYIAWGEEQKINEGYKCRIRDEWQIVPSLRISDALFIRRNNLYPKLIINEAEAYTTDTMH 420 Query 437 RVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAEL 496 RV + PN + L A ++NS + AF+EI GRS+GGG+LEL P E E++ +P + +A+L Sbjct 421 RVMVKPNAEIKALTASYYNSLSLAFSEICGRSHGGGVLELMPNEVEEILLPYNS-NNADL 479 Query 497 AQDVDLLLKA-NEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRGS 551 ++D +++A +I + L + ++ +L + G + + + W L RR RG Sbjct 480 LPEIDKMIRAKKDISEILKITNQKILKENFGFTDSEIELADSIWRKLSKRRLNRGK 535 >gi|317153586|ref|YP_004121634.1| N-6 DNA methylase [Desulfovibrio aespoeensis Aspo-2] gi|316943837|gb|ADU62888.1| N-6 DNA methylase [Desulfovibrio aespoeensis Aspo-2] Length=587 Score = 342 bits (878), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 202/543 (38%), Positives = 288/543 (54%), Gaps = 37/543 (6%) Query 32 TAASADKVRGGYYTPPAVARFLAHW-VHQAGPKILEPSCGDGRILRELSAI--------- 81 T DK+RGGYYT +AR+L W + +LEPSCGDG L SA Sbjct 28 TELDPDKLRGGYYTSLELARWLCAWAIRDPKESVLEPSCGDGSFLEAASARLEELGTHGP 87 Query 82 --TDHAHGVELVAREAKKSRDFAS----------VDTENLFTWLHKTQLGSWDGVAGNPP 129 + GVE++ EA K+R V++ + F W + ++D V GNPP Sbjct 88 SRANQLCGVEIIPDEADKARRRLRGGLGYRADDVVESSDFFAWWSRPGRSTFDVVIGNPP 147 Query 130 YIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQ 189 +IR+ ++ R A+ +M++ GL P ++TN WVPFVVA+ + ++GGR+ LV+PAELLQ Sbjct 148 FIRYQSFPEPHRSRAMSIMKQQGLLPNRMTNIWVPFVVAALAVLKEGGRMALVLPAELLQ 207 Query 190 VTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCG---------VVGPGPAHIRT 240 V+YAAQLR FL R+ I ++ L F+ QEV+LF + P + Sbjct 208 VSYAAQLRSFLTDRFSRIDIIACNELFFEKAEQEVLLFLADEARTAPSDLSVSNPCKVNL 267 Query 241 VRLGDANDLNALGDKDFTNESAP-ALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGE 299 D+ + + P + H+ EKW KYFL +I +R L+ S LG Sbjct 268 TESDSVADIVKREPLTVLHGALPKTVCHDSEKWLKYFLSSDEITFMRALRASDNTTDLGT 327 Query 300 LADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNH 359 A V+VG+VTG+N FF + + LGL + +PL+ RSA L G + DE Sbjct 328 FASVNVGVVTGKNQFFVLCKSDVEELGLEEYTIPLIGRSAHLEGALIDEAGWRMLADDEQ 387 Query 360 RTWLLDAADYP-TDP--ALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQI 416 R LL A T P AL ++ GE GV GYKCSIRKPW++ PS+++PD F+ RQI Sbjct 388 RVHLLHLAPINGTKPMGALAHYLRLGEEQGVDKGYKCSIRKPWYAVPSVYIPDAFVFRQI 447 Query 417 HFAPRLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILEL 476 + PR+ +N AT+TDT+HR+R DP + A ++ T A AEI GRSYGGG+LEL Sbjct 448 YDFPRIVLNRTGATATDTIHRMR-SKGSDPQAIVANSYSYLTAASAEIEGRSYGGGVLEL 506 Query 477 EPREAEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCR 536 EP EAE++ MP + + ++ D L++A ++ L+ VL +GLS R Sbjct 507 EPTEAEKVLMPATLVDAIPV-EECDALIRAGRLETVLEENSSCVLRGQMGLSKTECKMLR 565 Query 537 AAW 539 W Sbjct 566 DIW 568 >gi|334135654|ref|ZP_08509137.1| N-6 DNA Methylase [Paenibacillus sp. HGF7] gi|333606849|gb|EGL18180.1| N-6 DNA Methylase [Paenibacillus sp. HGF7] Length=548 Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 192/534 (36%), Positives = 284/534 (54%), Gaps = 28/534 (5%) Query 31 KTAASADKVRGGYYTPPAVARFLAHW--VHQAGPKILEPSCGDGRILRELSAITD--HAH 86 K A+A+K+RGGYYTP A+A F+ W ++LEPSCGDG + L A+ Sbjct 4 KENATAEKLRGGYYTPTALADFITRWGFTDNNVRRVLEPSCGDGAFVESLLAVEQPFSCT 63 Query 87 GVELVAREAKKSR------DFASVDTENLFTWLHKTQLGS-WDGVAGNPPYIRFGNWASE 139 +E++ E K + D +V E+ ++W + G +D V GNPPYIR+ + + Sbjct 64 AIEIIHDEMIKVQNMTTRNDHFNVIHEDFYSWYRENLNGERYDLVVGNPPYIRYQYLSED 123 Query 140 QRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREF 199 QR+ ++ G+R KL NAWV FVVA +L G++G V+PAELLQV Y+ LR + Sbjct 124 QREEQSRILTSNGMRSNKLINAWVSFVVACVSLLDRNGKIGFVIPAELLQVAYSEDLRNY 183 Query 200 LLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTN 259 L+ + IT+VTF LVF+ I QEVVL G A +R+ + +++ L + +F Sbjct 184 LMRNLQHITIVTFRELVFEDIEQEVVLLLGEKDVEHAEEHQIRILEFDNIIDLVE-NFET 242 Query 260 ESAPALLHE--KEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTF 317 + P + E KWT+YFL L+ ++QS I+ E+A+VD+GI TG N+FF Sbjct 243 NTVPFVDIEFTNTKWTRYFLSTKDNVLINEIRQSTDFIQFNEIAEVDIGITTGNNNFFCV 302 Query 318 TDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLD--AADYPTDP-A 374 A A+ GL PL++RS + G+ ++E +V + +LLD D+ P Sbjct 303 DRATAEDYGLIDISRPLIARSVSMDGIYFNEQVWQANVDRGAKAYLLDFPTIDFEQYPEG 362 Query 375 LVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDT 434 +I GE G + GYKC IR W+ PS+W PD F LR+ + P+ +N A STDT Sbjct 363 QRRYIIEGEKRGENTGYKCRIRNRWYQVPSIWTPDAFFLRRNYLYPKFVLNDFNAVSTDT 422 Query 435 VHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSA 494 +HR+R +D ++NS T AF EI GRSYGGG+LE+ P E E++ + P Sbjct 423 MHRIRFADGIDSRRAILAYYNSITLAFTEIEGRSYGGGVLEILPGEVEKIFV--PNLFQI 480 Query 495 ELAQDV---------DLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAW 539 EL D D + K ++I L +D +L++ L + V R W Sbjct 481 ELTDDYIEQLLHLIDDHVKKNDDILGILPEIDSRILVEILNIPMETVTAFRDMW 534 >gi|150025617|ref|YP_001296443.1| modification methyltransferase [Flavobacterium psychrophilum JIP02/86] gi|149772158|emb|CAL43634.1| Probable modification methyltransferase [Flavobacterium psychrophilum JIP02/86] Length=534 Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 190/530 (36%), Positives = 284/530 (54%), Gaps = 17/530 (3%) Query 34 ASADKVRGGYYTPPAVARFLAHWVHQ--AGPKILEPSCGDGRILRELSAIT---DHAHGV 88 ASA+K+RGG+YTP +A F+ W ILEPSCGDG + ++ + G+ Sbjct 7 ASAEKLRGGFYTPEKIAAFVLKWAINGSVNSDILEPSCGDGVFIEQIKENNYQYNSITGI 66 Query 89 ELVAREAKKSRDF----ASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 144 E EA+KS + ++ E+ + + + +D + GNPPYIR+ + EQ++ A Sbjct 67 EFDEIEAQKSDNIMLQNCTIINEDFHKYCNNIE-NRFDIIVGNPPYIRYQYFDVEQQNEA 125 Query 145 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 204 +++ + GL+ +KLTNAWV FV+ S+ L ++ G++G V+PAE+LQV+YA QLREFL Y Sbjct 126 IKIFNKSGLKYSKLTNAWVSFVIGSSQLLKENGKIGFVLPAEILQVSYAIQLREFLAKFY 185 Query 205 REITLVTFERLVFDGILQEVV-LFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAP 263 +I +V+FE+LVF I QEVV L C I + + DA L L + N + Sbjct 186 NKINIVSFEKLVFPDIQQEVVLLLCEKNQTNTHQIEHIEVRDAEALYKLDLRLLKNPTKR 245 Query 264 ALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQ 323 + + KWT YFL+ +I + + + +G A V+VGI TG N FFT Sbjct 246 IDI-KNNKWTFYFLEQEEIDFIEEIANRRNLPTIGNYAKVEVGITTGSNDFFTVPKTIVD 304 Query 324 ALGLRAHCVPLVSRSAQLSGLIYD----EDCRACDVAGNHRTWLLDAADYPTDPALVAHI 379 L+ P+V RS Q++ +I+ E + N + + A D AL +I Sbjct 305 LFELQEFAKPMVGRSVQVNSVIFSKQDWEQNQQTKAKSNLLVFPPNGALKNKDGAL-RYI 363 Query 380 TAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVR 439 GE G++ GYK IR+ W+ PS+ D +R+ + PRL VN A A +TDT+HRV Sbjct 364 ANGETLGINKGYKTGIREDWYVVPSIKKSDALFIRRNNLYPRLIVNEAEAYTTDTMHRVN 423 Query 440 LDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQD 499 PN D A ++NS +FAFAEI+GRSYGGG+LEL P E E++ +P S L + Sbjct 424 TKPNADIRAFTASYYNSLSFAFAEIVGRSYGGGVLELMPSEVEKILLPYNETHSNLLPEI 483 Query 500 VDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKR 549 ++ ID L+ D +L GL+ ++ + W L +RR R Sbjct 484 DKMIRDKVNIDTILEYTDNLLLKQTYGLTDIEISTAKRIWKKLSNRRLGR 533 >gi|308274110|emb|CBX30709.1| hypothetical protein N47_E42210 [uncultured Desulfobacterium sp.] Length=535 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 192/534 (36%), Positives = 294/534 (56%), Gaps = 25/534 (4%) Query 34 ASADKVRGGYYTPPAVARFLAHWVHQAGP--KILEPSCGDGRILRELSAITDHAH----G 87 A+A+K+RGG+YTP +A F+ W +ILEPSCGDG L +L +H Sbjct 7 ATAEKLRGGFYTPEPIAAFILKWGINGSSDYEILEPSCGDGIFLEQLKE-NNHKFKSVTA 65 Query 88 VELVAREAKKSRDFASVDTENL----FTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDP 143 +E EA+K+ D ++ +N+ F +D V GNPPYIR+ + EQ++ Sbjct 66 IEFDDVEAEKA-DKIKLNKKNVINTDFHLYCNDTTQKFDLVVGNPPYIRYQYFQEEQQNE 124 Query 144 ALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSR 203 A+++ R L+ +KLTNAWV FVV S+ L ++ G++G V+PAELLQV+YA QLREFL Sbjct 125 AIKVFNRAKLKYSKLTNAWVSFVVGSSLLLKEKGKIGFVIPAELLQVSYAQQLREFLAHF 184 Query 204 YREITLVTFERLVFDGILQEVVLF-CGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESA 262 Y ++ +++FE+LVF I QEVVL C G I + L DA+DL L D + + Sbjct 185 YNKMNIISFEKLVFPDIQQEVVLLLCEKNGSDSHLIEHLELRDASDLEKL-DVNILKSPS 243 Query 263 PALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKA 322 + + KWT YFL+ +I L + + + A V+VGI TG N +FT Sbjct 244 KKIDFKSNKWTYYFLEQEEIDFLEQIANKRKVPTIDNYASVEVGITTGANDYFTVPLPVV 303 Query 323 QALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAH---- 378 +A L+ + P+V RS Q++ +I+ E + + LL +P + H Sbjct 304 EAYDLKEYAKPMVGRSVQVNSVIFTEKDWKLNRQTKAKAHLLV---FPAKEKINGHKGVN 360 Query 379 --ITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVH 436 I GE+ GV+ GYK IR W+ PS+ + D +R+ + PRL +N A A +TDT+H Sbjct 361 SYIRWGESMGVNKGYKTGIRDDWFVIPSIKLSDALFIRRNNLYPRLILNEANAYTTDTMH 420 Query 437 RVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAEL 496 RV + + D A F+NS + AF+EI+GRSYGGG+LEL P EA ++ +P +A+L Sbjct 421 RVFMKKDTDKNAFIASFYNSLSLAFSEIVGRSYGGGVLELMPSEAGKILLPYQT-DNADL 479 Query 497 AQDVDLLLKANE-IDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKR 549 +D +++ + ID+ L++ ++ +L DG + + + + W L RR R Sbjct 480 LATIDKMMREKKSIDEILEITNKQILKDGYDFTDKEIKLADSIWKKLSCRRLNR 533 >gi|308229512|gb|ADO24167.1| M.AcuI [Acinetobacter calcoaceticus] Length=535 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 195/532 (37%), Positives = 278/532 (53%), Gaps = 19/532 (3%) Query 34 ASADKVRGGYYTPPAVARFLAHWVHQAGPK--ILEPSCGDGRILRELSA---ITDHAHGV 88 ASA+K+RGG+YTP +A F+ W ILEPSCGDG L +L + Sbjct 7 ASAEKLRGGFYTPEPIAAFILKWGINGSSDYDILEPSCGDGVFLEQLKKKDFCFQSVTAI 66 Query 89 ELVAREAKKSR--DFASVDTENL-FTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPAL 145 E EA K+ D A+ N F T +D V GNPPYIR+ + Q+ A Sbjct 67 EFDTIEANKANQIDIANKKVINQDFHLYCNTTSQKFDLVVGNPPYIRYQYFDKSQQIEAD 126 Query 146 ELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRYR 205 ++ ++ GL+ +KLTNAWV F+V S+ L ++ G++G VVPAELLQV+YA QLREFL Y Sbjct 127 KIFKKAGLKYSKLTNAWVSFIVGSSLLLKEKGKIGFVVPAELLQVSYAQQLREFLAHFYN 186 Query 206 EITLVTFERLVFDGILQEVVLFCGVVGPGPAH-IRTVRLGDANDLNALGDKDFTNESAPA 264 +I +++FE+LVF I QEVVL H I + L DA+DL L D + Sbjct 187 KINIISFEKLVFPDIQQEVVLLLCEKNSDTTHLIEHLELKDASDLEKL-DVNLLKSPRKQ 245 Query 265 LLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQA 324 + + KWT YFL+ +I L + + + LG+ ADV+VGI TG NS+FT + + Sbjct 246 IDFKSNKWTYYFLEQEEIDFLENIAERKNIPILGDFADVEVGITTGANSYFTVPISTVKE 305 Query 325 LGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAH------ 378 L P+V RS Q++ + + E ++ + LL +P + H Sbjct 306 FNLEQFAKPMVGRSVQVNSITFTESDWLQNLQMEAKANLL---VFPNRNQISNHSGANKY 362 Query 379 ITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRV 438 I GE GV+ GYK IR W+ PS+ + D +R+ + PRL +N A A +TDT+HRV Sbjct 363 IEYGEELGVNKGYKTRIRDDWFVIPSIKLSDALFIRRNNLFPRLILNEAQAYTTDTMHRV 422 Query 439 RLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQ 498 + + A F+NS + AF+EI+GRSYGGG+LEL P EA ++ +P L Q Sbjct 423 FIKQETNKQAFIASFYNSLSLAFSEIVGRSYGGGVLELMPSEAARILLPYQVDNDKLLDQ 482 Query 499 DVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRG 550 L+ + ID L + + +L G S + + W L RR RG Sbjct 483 IDKLMREKRSIDDILHISNDIILRQAYGFSKKEIELADRIWKKLSARRLNRG 534 >gi|291461471|dbj|BAI83353.1| conserved hypothetical protein [Macrococcus caseolyticus] Length=549 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 186/546 (35%), Positives = 283/546 (52%), Gaps = 26/546 (4%) Query 31 KTAASADKVRGGYYTPPAVARFLAHW-VHQAGPKILEPSCGDGRILRELSAITD--HAHG 87 KT S K+RG YYTP ++A F+ +W + + ILEPSCGDG L LS + Sbjct 4 KTNTSDKKLRGAYYTPSSLANFMTNWAIDKNTYSILEPSCGDGVFLTSLSKYKNDFKCTA 63 Query 88 VELVAREAKKSRD-------FASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQ 140 +E+ E K+ F ++ + + + + +D V GNPPYIR+ ++EQ Sbjct 64 IEIFEEEYLKAHKNVGGDSRFDVINADFYRQFENDLKNKHYDLVIGNPPYIRYQYLSAEQ 123 Query 141 RDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFL 200 R ++ G++ KL NAWV F VAS L G++ LV+PAELLQV YA LR++L Sbjct 124 RAEQSLILTDNGMKSNKLINAWVSFTVASVQLMNSNGKIALVIPAELLQVKYAEDLRKYL 183 Query 201 LSRYREITLVTFERLVFDGILQEVVLFCG---VVGPGPAHIRTVRLGDANDLNALGDKDF 257 + ++IT++TF++L+F + QEVV+ G G IR + D D + L Sbjct 184 MKHLQKITIITFKKLIFPDVEQEVVVLLGEKISNETGTHQIRIIEYDDIADFDNLEKSSM 243 Query 258 TNESAP--ALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFF 315 P + KWT+YFL QI L+ +++ +ADVD+GI TG N +F Sbjct 244 PLNKVPFKDIDFNTTKWTRYFLSKNQIELINSIQKDKKFYPFSNIADVDIGITTGNNKYF 303 Query 316 TFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLD--AADYPTDP 373 +A L PL++RS +SG+ ++E ++ T+LLD + +Y Sbjct 304 CLDLNTVKAYDLFEVTRPLIARSVNISGITFNEKDWKYNIERGANTYLLDYNSKEYKELN 363 Query 374 ALVA-HITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTV-NAAAATS 431 +L +I GE ++GYKC IRK W+ PS++ PD F LR+ H P+ + N A S Sbjct 364 SLQKEYIQLGEDNSENVGYKCRIRKEWFKIPSIYSPDAFFLRRNHHFPKFVLNNVNNAVS 423 Query 432 TDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAY 491 TDT+HR+R +D ++NS AF E+ RSYGGG+LE+ P E E++ +P Sbjct 424 TDTMHRIRFPFYIDRRKAILAYYNSIALAFTELEARSYGGGVLEILPGELEKVTIPNLDN 483 Query 492 GSAE-------LAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRD 544 E L + D+ + ++I+K L +VD+ VL D L +S +++ W L+D Sbjct 484 IDFEENEIDHLLNKIDDIFREDSDIEKVLKLVDQIVLKDKLNISSKVINEFNNIWHVLKD 543 Query 545 RRTKRG 550 RR R Sbjct 544 RRLNRN 549 >gi|15896770|ref|NP_350119.1| site-specific modification DNA-methyltransferase [Clostridium acetobutylicum ATCC 824] gi|337738741|ref|YP_004638188.1| site-specific modification DNA-methyltransferase [Clostridium acetobutylicum DSM 1731] gi|15026627|gb|AAK81459.1|AE007849_13 Site-specific modification DNA-methyltransferase [Clostridium acetobutylicum ATCC 824] gi|325510941|gb|ADZ22577.1| Site-specific modification DNA-methyltransferase [Clostridium acetobutylicum EA 2018] gi|336293023|gb|AEI34157.1| site-specific modification DNA-methyltransferase [Clostridium acetobutylicum DSM 1731] Length=571 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 188/571 (33%), Positives = 298/571 (53%), Gaps = 56/571 (9%) Query 31 KTAASADKVRGGYYTPPAVARFLAHWVHQAGP--KILEPSCGDGRIL-----------RE 77 + A+ +++ G Y+TP +A ++ WV Q KILEPSCG+G L R Sbjct 4 RKDATEERLTGRYFTPKDLASYIIDWVIQDNNINKILEPSCGNGVFLECLGERRLEDGRN 63 Query 78 LSAIT-------------------DHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQL 118 ++AI ++ + + R + V + F +++ +L Sbjct 64 ITAIEIDEDVSFEASMQIDNSLRFNNCYDYQRALRNDGDIVNNGIVIINDDFYKVYEQEL 123 Query 119 GS--WDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDG 176 + + GNPPYIR+ + +QR+ +++ R +RP KL NAWV FVVA + Sbjct 124 QGQRFQAIVGNPPYIRYQYLSEQQREEQSKILIRNNMRPNKLINAWVSFVVACAEILDGN 183 Query 177 GRVGLVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPA 236 G++GLV+PAELLQV YA LR F++ ++ IT+VTF LVF + QEVVL +V Sbjct 184 GKMGLVIPAELLQVAYAEDLRRFIMRTFQRITIVTFRELVFPNVQQEVVLL--LVEKEIL 241 Query 237 HIR--TVRLGDANDLNALGDKDFTNESAPALLHEKE-KWTKYFLDPAQIRLLRGLKQSAT 293 H R +R+ + D+N L + + +E + E KWTKYFL IRL+ ++++ Sbjct 242 HTREHQLRIVEYQDINELTESNDLDEYPFNDVEINESKWTKYFLSANDIRLINNIRENDK 301 Query 294 MIRLGELADVDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRAC 353 +R ++A V+VGI TG N +F + L C PL++RS ++G+ + + Sbjct 302 FVRFSDVARVEVGITTGNNDYFCVNRRVVEEYDLERVCRPLIARSVNINGVKFTYEDWKS 361 Query 354 DVAGNHRTWLLDAADYPTDPALVA---HITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDL 410 ++ +T+L+D D P D ++ +I G + GYKC IR W+ PS+W+PD Sbjct 362 NIENGAKTYLIDFPDVPYDEYQLSYKQYIEYGIHNDKNSGYKCRIRDRWYKVPSIWVPDA 421 Query 411 FMLRQIHFAPRLTVNA--AAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRS 468 F LR+ H P+ +N+ A STDT+HRVR + + D + ++NS AF EI GRS Sbjct 422 FFLRRNHLYPKFVLNSQEVNAVSTDTMHRVRFNNHDDRERILLSYYNSIALAFTEIEGRS 481 Query 469 YGGGILELEPREAEQLPMPPPAYGSAELAQD---------VDLLLKANE-IDKALDVVDR 518 YGGG+LE+ PRE ++ MP + EL D +D +++N+ I +D +D Sbjct 482 YGGGVLEILPREVGRIIMPDLR--NRELIDDATVSNLLNRIDGYIRSNDNILGIVDEIDE 539 Query 519 HVLIDGLGLSPRLVAGCRAAWLTLRDRRTKR 549 +L++ +G+ +V R WLTL+ RR R Sbjct 540 IILVEIMGVDENVVREFRNIWLTLQRRRLNR 570 >gi|73669700|ref|YP_305715.1| DNA methylase [Methanosarcina barkeri str. Fusaro] gi|72396862|gb|AAZ71135.1| probable DNA methylase (modification methylase) (methyltransferase) [Methanosarcina barkeri str. Fusaro] Length=415 Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 160/379 (43%), Positives = 223/379 (59%), Gaps = 5/379 (1%) Query 148 MRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRYREI 207 M R GL P +LTN WVPFV+AST L D GR+ +V+PAEL QV YAA+ R FL + +I Sbjct 1 MERAGLHPNRLTNIWVPFVIASTLLLTDHGRLAMVIPAELFQVKYAAETRRFLCENFSKI 60 Query 208 TLVTFERLVFDGILQEVVLFCGVV-GPGPAHIRTVRLGDANDLNALGDKDFTNESAPALL 266 T++TF++L+FD QE++LF G G + IR + L + +DL D + Sbjct 61 TILTFKKLLFDDAQQEIILFLGEKNGKENSGIRMIELDNLDDLLTYSSDDINHLEFKPTN 120 Query 267 HEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQALG 326 EKWTKY+LD +I+LL LK + + G+ DVDVG+VTG N FF + K + Sbjct 121 SSNEKWTKYYLDRDEIQLLETLKHNENITLSGKAIDVDVGVVTGDNKFFILNEEKMKKYN 180 Query 327 LRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPA---LVAHITAGE 383 ++ +V+RSA L G ++ +V + T+LL + P D +I GE Sbjct 181 IKEPLQKIVTRSAHLKGTVFTNTDFEDNVQKGYPTYLLKPQNNPIDKLSEHFQNYIKMGE 240 Query 384 AAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDPN 443 GVH GYKC IRK W+ PS+W+PD FMLRQ+H P++ +N AT TDTVHRV+ Sbjct 241 KLGVHKGYKCKIRKQWYIVPSVWIPDAFMLRQVHAYPKIALNKTNATCTDTVHRVKFINR 300 Query 444 VDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDLL 503 D ++A F NS T AFAEI GRSYGGG+L EP E+E LP+P L++ +D L Sbjct 301 YDGELVSAAFLNSLTLAFAEITGRSYGGGVLTFEPSESEMLPIPLVNAEKLNLSK-IDEL 359 Query 504 LKANEIDKALDVVDRHVLI 522 ++ ++I LD+ D+ + I Sbjct 360 IRKDDIQTVLDINDKILFI 378 >gi|255027083|ref|ZP_05299069.1| DNA methylase (modification methylase) (methyltransferase) [Listeria monocytogenes FSL J2-003] Length=408 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 165/407 (41%), Positives = 232/407 (58%), Gaps = 5/407 (1%) Query 147 LMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRYRE 206 +M+ +GL+P KLTN WVPF+V S ++ D G++ +V+PAEL QV YAA+ R FL + ++ Sbjct 1 MMQELGLKPNKLTNIWVPFLVKSASILTDNGKLAMVIPAELFQVKYAAETRIFLSTFFKR 60 Query 207 ITLVTFERLVFDGILQEVVLF-CGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPAL 265 IT+VTF++LVF I QEVVL C IR + + DL +L N + L Sbjct 61 ITIVTFKKLVFQDIQQEVVLLLCEKETINDEGIRVIECENLEDLESLNLNLINNLAVKPL 120 Query 266 LHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQAL 325 H EKWTKYFL+ +I LLR LK + +I G++ +VG+VTGRN FF + Sbjct 121 DHSSEKWTKYFLNNDEIVLLRNLKDDSRIISCGDIFKSEVGLVTGRNEFFMMKKKDVEKW 180 Query 326 GLRAHCVPLVSRSAQLSGLIY-DEDCRACDVAGNHRTWLLD-AADYPTDPALVA-HITAG 382 L + +P+VS+S QL G+ + D D + V+ L D+ P +I G Sbjct 181 NLEEYTIPVVSKSNQLQGITFSDNDFQENSVSQKAIYLFLPPDKDFEELPKTCQDYIKYG 240 Query 383 EAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDP 442 E G H GYK IRK W+ TPS W+PD F LRQ+ P++ +N A+STDT+HRVR Sbjct 241 EEKGFHTGYKTRIRKRWYITPSRWIPDAFALRQVGDYPKIILNETDASSTDTIHRVRFKE 300 Query 443 NVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQDVDL 502 N++ F NS TFAF+EI GRSYGGG++ EP E ++ +P S + ++D Sbjct 301 NINKKKAILAFFNSLTFAFSEITGRSYGGGVMTFEPTETIEIKIPQFDDLSVDF-DEIDK 359 Query 503 LLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKR 549 L++ EI+K LD++D +LI+ G S V R W L RR R Sbjct 360 LIRKREIEKVLDIIDEALLIEQHGFSKNEVTMLRNIWKKLSLRRINR 406 >gi|225868543|ref|YP_002744491.1| type II restriction enzyme and methylase [Streptococcus equi subsp. zooepidemicus] gi|225701819|emb|CAW99254.1| type II restriction enzyme and methylase [Streptococcus equi subsp. zooepidemicus] Length=540 Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 171/520 (33%), Positives = 268/520 (52%), Gaps = 21/520 (4%) Query 36 ADKVRGGYYTPPAVARFLAHW-VHQAGPKILEPSCGDGRILRELSAI---------TDHA 85 + K RGGYYTP + F+A W + K+LEPS GDGR + + TD Sbjct 7 SKKNRGGYYTPQKLTDFIAKWAISTPSDKVLEPSAGDGRFVDSAYKVFQNFDVAFNTDQI 66 Query 86 HGVELVAREA-KKSRDFASVDTENLFTWLHKT--QLGSWDGVAGNPPYIRFGNWASEQRD 142 +E EA K + A V + F + + +++ + GNPP+IR+ + E Sbjct 67 LAIEYNESEALKIDNNKAKVINSDFFKFFQEKLQNKETFNVILGNPPFIRYQSIDKEISA 126 Query 143 PALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLS 202 A + M G P K+TN W PF++ S L GR+G+++PAELLQV YAA++R +LL Sbjct 127 KAFDSMIYYGFNPNKMTNLWAPFLLLSAELLTADGRLGMIIPAELLQVDYAAEIRAYLLQ 186 Query 203 RYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNES- 261 ++ E+TL++F +F+G QE+V+ G + R + L +DL L + NE+ Sbjct 187 KFSELTLISFNDNLFEGAQQEIVVLLGKIKSKNTGFRFIELNSLSDLETL---ELNNEAT 243 Query 262 -APALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDA 320 + KEKW KYFL P +I + ++ + ++A+V+VG+VTG+N+FF Sbjct 244 FVKDIEISKEKWLKYFLTPNEINNFKSAISNSKLKLFDDIAEVNVGVVTGQNNFFVVNKE 303 Query 321 KAQALGLRAHC-VPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHI 379 L + +VSR+ Q++G+ + + R ++ ++ L +I Sbjct 304 IIDTFDLENDSLIDIVSRAEQINGIELN-NSRLKELYNENKKVKLFMPKKVLSNNERKYI 362 Query 380 TAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVR 439 GE+ H GYK IRK W+ P W P+ F LRQ+H P++ +N AT+TDT+H+VR Sbjct 363 DFGESKEYHSGYKTRIRKEWYRVPVSWAPEAFFLRQVHEYPKIVINKTNATNTDTLHKVR 422 Query 440 LDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAELAQD 499 N + +A F NS T E+ GRSYGGG+L EP E L +P + + E + Sbjct 423 ARKNYEIGNIALSFLNSLTLLQCELTGRSYGGGVLTFEPGEVRSLKVPYYQFDAVERSML 482 Query 500 VDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAW 539 + LL EI +A+D+VD VL + S + + ++ W Sbjct 483 MKLLSNG-EIQQAVDIVDEIVLKNKCNFSKQEILKFKSGW 521 >gi|336055457|ref|YP_004563743.1| hypothetical protein WANG_p2038 [Lactobacillus kefiranofaciens ZW3] gi|333959034|gb|AEG41840.1| hypothetical protein WANG_p2038 [Lactobacillus kefiranofaciens ZW3] Length=526 Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 165/483 (35%), Positives = 257/483 (54%), Gaps = 17/483 (3%) Query 31 KTAASADKVRGGYYTPPAVARFLAHWVHQAGPK-ILEPSCGDGRILRELSAITDHAHGVE 89 K +A K+RGGYYTP +A +L +V + PK +LEP+ GDG +L+ + + +E Sbjct 4 KETQTARKLRGGYYTPYPIAEYLWKYVKENNPKQVLEPAAGDGALLKPIDNSDINIDAIE 63 Query 90 LVAREAKK-SRDF----ASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPA 144 EA+K +++ V + F W ++ +D V NPPYIR+ QR Sbjct 64 YQDSEAEKINKNINIPQVKVYVTDFFKWFDDHKIQEYDAVLSNPPYIRYQYLTDRQRTIQ 123 Query 145 LELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRY 204 E++ +R +L NAWV FVVA+ ++ ++GGR+GLV+P++LLQVTYA LR+F+L Sbjct 124 SEILVDNSMRSNRLINAWVAFVVAAISMLKEGGRIGLVIPSDLLQVTYAKDLRQFMLRNL 183 Query 205 REITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESAPA 264 +E+ +++F VF Q +L G+ G G + + + D +DL D S Sbjct 184 KELNIISFRNAVFPETEQRFILLLGIKGRGEPKFKHIVVDDIHDL-----PDLNKISTEP 238 Query 265 LLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQA 324 L EKW+ L + L K+ + LA+V+VGI TG N FF+ T + Sbjct 239 LPENSEKWSDLVLPRREREFLYSHKKDWEL--FNNLANVEVGITTGANPFFSLTQEQVLN 296 Query 325 LGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLD--AADYPTDP-ALVAHITA 381 + + PL+ RS ++GL Y+++ + + WLLD DY + P L +I+ Sbjct 297 IDAKDFVRPLLGRSVSVNGLFYNKEKLIENAEKGQKVWLLDLNNKDYISLPIKLRNYISE 356 Query 382 GEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLD 441 E V+ YK IR W+ PS+W+P F+LR+I P+L +N A STDT HRV + Sbjct 357 AEHNHVNTAYKLRIRNIWYQIPSIWVPQAFLLRRIGNLPKLVINKVNAVSTDTFHRVSIL 416 Query 442 PNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPP-PAYGSAELAQDV 500 V+ L F++S + + E+ GRSYGGG LE+ P ++ Q +P Y S +L ++V Sbjct 417 DKVNINLLLIAFYSSLSLVYVELAGRSYGGGALEILPGDSSQFRLPAVNYYQSIDLNKEV 476 Query 501 DLL 503 +L Sbjct 477 KIL 479 >gi|342218184|ref|ZP_08710809.1| hypothetical protein HMPREF1040_0938 [Megasphaera sp. UPII 135-E] gi|341590892|gb|EGS34118.1| hypothetical protein HMPREF1040_0938 [Megasphaera sp. UPII 135-E] Length=530 Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 167/530 (32%), Positives = 278/530 (53%), Gaps = 15/530 (2%) Query 31 KTAASADKVRGGYYTPPAVARFLAHWV--HQAGPKILEPSCGDGRILRELSAITDHAH-- 86 K+ + +K+ G +YTP + FL W+ Q +LEPS GDGR ++++ + D A+ Sbjct 4 KSKQTEEKLNGVFYTPFEIVDFLTRWITDKQQISNVLEPSAGDGRFVKQIVELADKANVT 63 Query 87 GVEL--VAREAKKSRDFASVDTENLFTWLHKTQ-LG-SWDGVAGNPPYIRFGNWASEQRD 142 VE+ + E K+ D V ++ + + + + +G +D V GNPPYIR+ + EQR+ Sbjct 64 AVEIDPLECEIIKAIDNTKVINDDFYNFYEEIKDIGIKYDAVIGNPPYIRYQFLSEEQRN 123 Query 143 PALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLS 202 ++++R G++P KL N+WV F VAS L GG+ V+P +LLQV+YA +LR+F+ Sbjct 124 YQSDILKRNGMKPNKLINSWVAFTVASIELLSLGGKFAFVLPTDLLQVSYAKELRKFIFK 183 Query 203 RYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTNESA 262 +E+T++ F+ +VF GI Q+VVL G+ + +R D++ L +K + Sbjct 184 ELKEVTIIRFDNIVFSGIQQDVVLIFGIKRDMESKKTLIRNISVKDMSQLSNKIYAIPFE 243 Query 263 PALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKA 322 +KW K+ L ++ + T + +++ ++VGI TG N F + Sbjct 244 YYDFDNSDKWRKFLLSKNFMKFYEDKFINETT-SIKDISTIEVGITTGNNKVFVVNNETV 302 Query 323 QALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHITAG 382 L + VPLV RS + GL Y E+ + + + WLLD + + +I Sbjct 303 NKYSLDDYKVPLVGRSLDVFGLFYTENDISHNSLNCRKVWLLDFNNRKLNRGAKKYIKEV 362 Query 383 EAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRLDP 442 E+ H GYK +R+ W+ PS+W+PD F+LR++ P++ N ATSTDT HR+R + Sbjct 363 ESRDEHKGYKLGLREKWYEVPSIWIPDAFLLRRMGNFPKIVKNEIKATSTDTFHRIRFNE 422 Query 443 NVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYG--SAELAQDV 500 +D A F++S T E+ GR +GGG LE+ P + + + +P G E+++ + Sbjct 423 GIDVAKTLVSFYSSVTLLSFELEGRVFGGGALEILPGDLKNIRLPKINDGIDFIEISKKI 482 Query 501 DLLLKAN-EIDKALDVVDRHVLIDGL-GLSPRLVAGCRAAWLTLRDRRTK 548 D L+AN E + + VD LI L G + + W +LR R + Sbjct 483 DEKLRANHEFTEIVKWVDS--LIQSLSGFNKSEINEIYDVWNSLRRNRVE 530 >gi|325563988|gb|ADZ31407.1| M.TliI [Thermococcus litoralis] Length=567 Score = 292 bits (748), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 198/572 (35%), Positives = 304/572 (54%), Gaps = 64/572 (11%) Query 33 AASADKVR--GGYYTPPAVARFLAHWVHQAGPK--ILEPSCGDGRILR-------ELSA- 80 A + DK++ G TP +A FL +W ++ PK ILEPSCGDG LR EL A Sbjct 4 APTLDKIKKLGQVLTPFEIAEFLVNWAIKS-PKDLILEPSCGDGIFLRAAIRRLMELGAS 62 Query 81 ---ITDHAHGVELVAREAKKSR-----DFASVDT---------------ENLFTWLHKTQ 117 I+ +GVE+ + +K++ +F+ V T + L L + Sbjct 63 PESISKQVYGVEIDSEILEKTKKLLLTEFSFVPTLINADFFDLEPPRGQQTLNNLLTAPK 122 Query 118 LGSWDGVAGNPPYIRFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGG 177 + D + GNPPYIR+ +++ + R+ AL G++ +LT +WVPFV+ + + G Sbjct 123 IPRVDVIVGNPPYIRYQSFSGKTREKALRTALEEGVKLPELTASWVPFVIHAEKFLKKDG 182 Query 178 RVGLVVPAELLQVTYAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAH 237 R+ +V+P++LL V YA R++LL ++ IT+++FER VF GIL++ VL GP Sbjct 183 RLAMVLPSKLLHVGYAKPFRKWLLKKFSNITIISFERRVFPGILEDTVLLLA-SKSGPYG 241 Query 238 IRTVRLGDANDLNALGDKDFTNESAPALL---HEKEKWTKYFLDPAQIRLLRGL---KQS 291 +R V + D +L+ L D ES+ +L + EKWTKY L P + G K Sbjct 242 VRFVEVTDERELSGL---DL--ESSTFVLTRPNPDEKWTKYIL-PQNLESSLGEILNKVQ 295 Query 292 ATMIRLGELADVDVGIVTGRNSFFTFTDAKAQALGL-RAHCVPLVSRSAQLSGL-IYDED 349 ++ LGEL V +G+VTG N FFT T+ +A + G+ + + VPLVSR+ Q+SG+ I D Sbjct 296 EKVVLLGELGIVTIGVVTGSNEFFTLTEEEASSWGIEKEYLVPLVSRAEQISGVEITTSD 355 Query 350 CRACDVAGNHRTWLLDAADYPTDPALVA----HITAGEAAGVHLGYKCSIRKPWWSTPSL 405 G + +LL+ P D + I G+ V YK IRK W++ P + Sbjct 356 WELIKKLG-QKCYLLEVTK-PWDELGMGVREYLIKRGDELNVRARYKVRIRKTWYTVPGV 413 Query 406 WMPDLFMLRQIHFAPRL-----TVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFA 460 PDLFM H P++ VN ATST+T+H++ L ++P L+ +F+NS T Sbjct 414 RFPDLFMSYMSHEVPKMASNEIVVNERKATSTNTIHQIFLKRKLEPRLLSTLFYNSLTLL 473 Query 461 FAEIMGRSYGGGILELEPREAEQ--LPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDR 518 E++GR YGGG+L++EP+EAE+ +PM +++ VD LL+A A+ +V+ Sbjct 474 STELVGRFYGGGVLKIEPKEAEKILIPMAEEPKEILDISSKVDRLLRAKRTADAVAIVNE 533 Query 519 HVLIDGLGLSPRLVAGCRAAWLTLRDRRTKRG 550 +L LGL PR V W L++RR K+ Sbjct 534 VILEGELGLKPRDVEVIEETWKYLQERRMKKS 565 >gi|262045267|ref|ZP_06018292.1| modification methylase Eco57IB [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037323|gb|EEW38569.1| modification methylase Eco57IB [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length=542 Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 173/545 (32%), Positives = 260/545 (48%), Gaps = 34/545 (6%) Query 31 KTAASADKVRGGYYTPPAVARFLAHWVHQAGPK-ILEPSCGDGRILRELSA----ITDHA 85 K +A K+RGGYYTP +A F WV PK ILEPSCGDG + L Sbjct 4 KADQTAQKLRGGYYTPQNIADFTTKWVLNNKPKSILEPSCGDGVFFQSLYNNKFDKNTKV 63 Query 86 HGVELVAREAKKSRD------FASVD-TENLFTWLHKTQLG----SWDGVAGNPPYIRFG 134 G EL EAKKS + F+ V+ TE F K + S+D + GNPP+IR+ Sbjct 64 QGYELFDIEAKKSMELCKSLGFSDVEITEGDFLEWAKVAIQKKNTSFDAIIGNPPFIRYQ 123 Query 135 NWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAA 194 + ++ + + + L+ TK TNAWVPF+++ +L GGR+G+V+P+E++ V +A Sbjct 124 FLEKDFQENTEAIFKLLDLKFTKHTNAWVPFILSGVSLLNPGGRLGMVIPSEIINVMHAQ 183 Query 195 QLREFLLSRYREITLVTFERLVFDGILQEVVLF---------CGVVGPGPAHIRTVRLGD 245 LR FL +I ++ + + F LQ V+ C G G + Sbjct 184 SLRTFLGEHCSKIVIIDPKEIWFSETLQGAVILLVEKKINLDCASQGVGIKGVSGFDFLQ 243 Query 246 ANDLNALGDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDV 305 N + + + N K KWTK LD ++ LL + + + +A+V+V Sbjct 244 KNPEDIFNETNTINGDTV-----KGKWTKAVLDKNEVNLLNEIIKHPNVHSFDTIANVEV 298 Query 306 GIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLL- 364 G+VTG N FF A L P+ RS G+IYDE ++ + L Sbjct 299 GMVTGANEFFLVNKDVVDAFDLSEFTHPMFGRSQHCQGVIYDEVQHLANIENKLPVYFLY 358 Query 365 -DAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLT 423 D + +I GE G H YKC IRKPW+ PS++ L ML++ H APRL Sbjct 359 LDKEFHELPKKTQEYIFNGELQGFHKRYKCRIRKPWYKVPSVFSTKLAMLKRSHDAPRLI 418 Query 424 VNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQ 483 N A +TDT +R++ N++ L+ F N T FAE+ GRSYGGG++EL P E + Sbjct 419 YNQYQAYTTDTAYRIKPKSNINEEKLSYCFLNPLTAIFAELEGRSYGGGVMELVPSEIRK 478 Query 484 LPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLR 543 L +P P +L++ + ++ N + + V + +G +V W L+ Sbjct 479 LFIPLPEKIEFDLSELNNSMM--NRSMEQILVEQGKKIFSHMGYDDEVVEKLIHIWNKLK 536 Query 544 DRRTK 548 +RR + Sbjct 537 NRRQR 541 >gi|331019596|gb|EGH99652.1| modification methyltransferase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length=544 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 187/543 (35%), Positives = 282/543 (52%), Gaps = 40/543 (7%) Query 35 SADKVRGGYYTPPAVARFLAHWVHQAGPKI-LEPSCGDGRILRELSAI----TDHAHGVE 89 + K+RGGYYTP +A FLA WV Q+G KI LEPSCGDG L+ + + E Sbjct 8 TEQKLRGGYYTPLDIATFLARWVQQSGAKIVLEPSCGDGVFLKAFDNVGFSKSSIISAFE 67 Query 90 LVAREAKKSRDF-------ASVDTENLFTWLHKTQLG---SWDGVAGNPPYIRFGNWASE 139 L EA KSR A V + W G +DGV GNPP+IR+ Sbjct 68 LDFIEAAKSRSLSDGFEFKADVVNADFLAWALPRLGGDKEQFDGVVGNPPFIRYQYLPEL 127 Query 140 QRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREF 199 + A ++ + +G + TK TNAWVPFV+AS L + GGR+ +V+P+EL+ V +A LR F Sbjct 128 FQATAEKVFKMLGCKFTKHTNAWVPFVLASIALLKPGGRLAMVLPSELIHVLHAQSLRTF 187 Query 200 LLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDFTN 259 L +++ ++ E + F+G LQ V+ ++ A+I G L + + F + Sbjct 188 LAKECKKLVIIDPEEIWFEGTLQGAVI---LMAEKKANISQPNEGLG--LLPVTGRSFLS 242 Query 260 ESAPALLHEKE---------KWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTG 310 E+ A+ E KWT FL P+ LL ++ + R ++A+VDVGIVTG Sbjct 243 ENPQAVFDRAEPVTGKALGGKWTIAFLKPSVRDLLDEVETFPRIDRFKDVAEVDVGIVTG 302 Query 311 RNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDE----DCRACDVAGNHRTWLLDA 366 N FF D + GL+ + RS G+IYDE R + N + + Sbjct 303 ANKFFLVDDETVEKFGLQRWAHKMFGRSEHCPGIIYDEFQHLQNRDRGLPSNFLWFPEGS 362 Query 367 ADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNA 426 A+Y + + A+I+ GE+ + YKCS+R+ W++ PS++ D+ ML++ H APRL +N Sbjct 363 ANYHAE--IAAYISYGESQDLQTRYKCSVRRCWYTVPSVYTTDIGMLKRCHDAPRLILNE 420 Query 427 AAATSTDTVHRVRLDPNVDPAT-LAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLP 485 A A +TDT +R+R PA + + F N T AE+ GR+YGGG+LEL P E E+L Sbjct 421 AKAYTTDTAYRIR--SLQQPAEGIVSAFVNPLTALSAELEGRTYGGGVLELVPSEIEKLI 478 Query 486 MPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDR 545 M P + + L + ++ +K + A+ VL + GL V +AW+ +R+R Sbjct 479 MVSPKHQISTL-KVLNENVKRTSMRNAILTHGCEVLRNA-GLHISQVEDIASAWVFMRNR 536 Query 546 RTK 548 R + Sbjct 537 RQR 539 >gi|298485666|ref|ZP_07003745.1| N6 adenine-specific DNA methyltransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159692|gb|EFI00734.1| N6 adenine-specific DNA methyltransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length=544 Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 187/545 (35%), Positives = 283/545 (52%), Gaps = 44/545 (8%) Query 35 SADKVRGGYYTPPAVARFLAHWVHQAGPKI-LEPSCGDGRILRELSAI----TDHAHGVE 89 + K+RGGYYTP +A FLA WV Q+G KI LEPSCGDG L+ + + E Sbjct 8 TEQKLRGGYYTPLDIATFLALWVQQSGAKIVLEPSCGDGVFLKAFDNVGFSKSSIISAFE 67 Query 90 LVAREAKKSRDFASVDTENLFTWLHKTQLGSW------------DGVAGNPPYIRFGNWA 137 L EA KSR + D T + T +W DGV GNPP+IR+ Sbjct 68 LDFIEAAKSRSLS--DGFEFKTDVVNTDFLAWALPRLGGDKEQFDGVVGNPPFIRYQYLP 125 Query 138 SEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLR 197 + A ++ + +G + TK TNAWVPFV+AS L + GGR+ +V+P+EL+ V +A LR Sbjct 126 ELFQATAEKVFKMLGCKFTKHTNAWVPFVLASIALLKPGGRLAMVLPSELIHVLHAQSLR 185 Query 198 EFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDF 257 FL +++ ++ E + F+G LQ V+ ++ A+I G L + + F Sbjct 186 TFLAKECKKLVIIDPEEIWFEGTLQGAVI---LMAEKKANISQPNEGLG--LLPVTGRSF 240 Query 258 TNESAPALLHEKE---------KWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIV 308 +E+ A+ E KWT FL P+ LL ++ + R ++A+VDVGIV Sbjct 241 LSENPQAVFDRAEPVTGKALGGKWTIAFLKPSVRDLLDEVETLPRIDRFKDVAEVDVGIV 300 Query 309 TGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDE----DCRACDVAGNHRTWLL 364 TG N FF D + GL+ + RS G+IYDE R + N + Sbjct 301 TGANKFFLVDDETVEKFGLQRWAHKMFGRSEHCPGIIYDEFQHLQNRDRGLPSNFLWFPE 360 Query 365 DAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTV 424 +A+Y + A A+I+ GE+ + YKCS+R+ W++ PS++ D+ ML++ H APRL + Sbjct 361 GSANYHAEIA--AYISYGESQDLQTRYKCSVRRCWYTVPSVYTTDIGMLKRCHDAPRLIL 418 Query 425 NAAAATSTDTVHRVRLDPNVDPAT-LAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQ 483 N A A +TDT +R+R PA + + F N T AE+ GR+YGGG+LEL P E E+ Sbjct 419 NEAKAYTTDTAYRIR--SLQQPAEGIVSAFVNPLTALSAELEGRTYGGGVLELVPSEIEK 476 Query 484 LPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLR 543 L + P + + L + ++ +K + A+ VL + GL V +AW+ +R Sbjct 477 LIIVSPKHQISTL-KTLNENVKRTSMRNAILTHGCEVLRNA-GLHISQVEDIASAWVFMR 534 Query 544 DRRTK 548 +RR + Sbjct 535 NRRQR 539 >gi|254361369|ref|ZP_04977511.1| possible type IV site-specific deoxyribonuclease, methyltransferase subunit [Mannheimia haemolytica PHL213] gi|153092870|gb|EDN73907.1| possible type IV site-specific deoxyribonuclease, methyltransferase subunit [Mannheimia haemolytica PHL213] Length=539 Score = 266 bits (679), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 165/542 (31%), Positives = 267/542 (50%), Gaps = 29/542 (5%) Query 31 KTAASADKVRGGYYTPPAVARFLAHWVHQAGPK-ILEPSCGDGRILREL----SAITDHA 85 K + K+RGGYYTP +A ++ WV P ILEPSCGDGR ++ L S + Sbjct 4 KDEQTEQKLRGGYYTPQYLADYITKWVLGINPSSILEPSCGDGRFIQALFNNNSEKEKNI 63 Query 86 HGVELVAREAKKSR--------DFASVDTENLFTWL---HKTQLGSWDGVAGNPPYIRFG 134 EL+ EA KS+ + SV + + W K ++G+ GNPP+IR+ Sbjct 64 TCFELIDSEADKSKYLLKSLGFNNFSVYSSDFLRWSVDNFKADQIEFEGIIGNPPFIRYQ 123 Query 135 NWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAA 194 E ++ A + + + TK TN+WV F+++S + ++GGR+G+++P+E+L V +A Sbjct 124 YLNEEFQESAKNVFDLLNFKFTKHTNSWVSFLISSLSFLKEGGRLGMIIPSEILNVIHAQ 183 Query 195 QLREFLLSRYREITLVTFERLVFDGILQE--VVLFCGVVGPGPAHIRTVRLGDANDLNAL 252 LR+F+ ++ ++ + + F+ LQ ++L V I + + D + +N Sbjct 184 SLRDFISQGLHKVLIINPKNIWFENTLQGALIILIEKVDNESKKGISILNVEDDDFINID 243 Query 253 GDKDFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRN 312 +K F +KW L ++ L+ +K ++ + ++A V+VGIVTG N Sbjct 244 PNKLFVKSKYIDFKDLPDKWVGANLTEEELSLINKVKNHRSVYKFSDIATVEVGIVTGAN 303 Query 313 SFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTD 372 FF D L P+ +S G+IYD + + N T + D ++ Sbjct 304 DFFLVNDHIVSKYKLDRFVYPMFGKSQHCKGIIYDNEQHFENKEKNLPTNFIYLEDNESN 363 Query 373 -PALV-AHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAAT 430 P LV +I GE A H YKC IRKPW+ PS++ ++ ML++ H AP+L +N A Sbjct 364 LPLLVQTYIKEGEDAEYHKRYKCKIRKPWYKVPSVYSTNIGMLKRSHEAPKLILNKLGAY 423 Query 431 STDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPA 490 +TDT +R++ + D L F N T +E+ GR YGGG+LEL P E L +P Sbjct 424 TTDTAYRIKSNKFQD-EILVCCFLNPLTMILSELNGRFYGGGVLELVPSEIRNLYIPIIE 482 Query 491 ---YGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRT 547 + EL ++V KA I+ + +L + LG S A + W L++ R Sbjct 483 NIDFNIEELNEEV----KAGNIENVIRNNGEKILTN-LGFSQEDNAMLMSIWKKLKNNRL 537 Query 548 KR 549 +R Sbjct 538 RR 539 >gi|309704638|emb|CBJ03988.1| putative modification methylase [Escherichia coli ETEC H10407] Length=541 Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 167/549 (31%), Positives = 265/549 (49%), Gaps = 41/549 (7%) Query 31 KTAASADKVRGGYYTPPAVARFLAHWVHQAGPK-ILEPSCGDGRILRELSAITDHAHG-- 87 K ++ K+RGGYYTP +A ++ WV PK ILEPSCGDG ++ AI ++ + Sbjct 4 KADQTSQKLRGGYYTPQNLADYVTKWVLSKNPKTILEPSCGDGVFIQ---AIANNGYNSN 60 Query 88 -----VELVAREAKKS------RDF--ASVDTENLFTWLH---KTQLGSWDGVAGNPPYI 131 EL EA K+ +F A++ + W + K +DG GNPP+I Sbjct 61 IELFCFELFDTEASKALERCKLNNFSNATITEGDFLVWANECLKKNKQIFDGALGNPPFI 120 Query 132 RFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVT 191 R+ ++ A + + L+ TK TNAWVPF+++S L + GGR+G+V+P+E+ V Sbjct 121 RYQFLEKNFQEQAQLVFEHLDLKFTKHTNAWVPFLLSSLALLKQGGRIGMVIPSEISHVM 180 Query 192 YAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNA 251 +A LR +L +I ++ + + F+ LQ V+ P + + Sbjct 181 HAQSLRSYLGHVCSKIVIIDPKEIWFEDTLQGAVILLAEKKQYPD-----EASQGVGIVS 235 Query 252 LGDKDFTNESAPALLHE---------KEKWTKYFLDPAQIRLLRGLKQSATMIRLGELAD 302 + +F E L ++ + KWTK L +++L++ + + + ++A Sbjct 236 VSGFEFLQEDPNVLFNDTAGINGETVEGKWTKATLSIDELQLIKRVIAHPDVRKFKDIAK 295 Query 303 VDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTW 362 VDVGIVTG N++F + + L P+ RS G+IYDE + T Sbjct 296 VDVGIVTGANNYFLVDNETVKLYKLERFAHPMFGRSQHCPGIIYDEKQHVENQEKGLPTN 355 Query 363 LL--DAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP 420 L D ++ +I GE H YKC IRKPW+ PS++ ++ ML++ H AP Sbjct 356 FLYIDEEFEYLSKSVKNYIKLGEVEEYHKRYKCRIRKPWFKVPSVYSTEIGMLKRCHDAP 415 Query 421 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE 480 RL N A +TDT +RV L F N T AE+ GR YGGG+LEL P E Sbjct 416 RLIHNRVRAYTTDTAYRVS-STVTSTENLVCSFLNPITVITAELEGRFYGGGVLELVPSE 474 Query 481 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 E+L + P G ++++LL+K +I++ + +++D LG + W Sbjct 475 IEKLYI-PIVEGLEHNVEELNLLIKDGQIERVIR-QQGSLILDKLGFTQEENEKLVEIWK 532 Query 541 TLRDRRTKR 549 LRDRR ++ Sbjct 533 KLRDRRLRK 541 >gi|345391662|gb|EGX21448.1| modification methylase Eco57IB [Escherichia coli STEC_S1191] Length=541 Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 167/549 (31%), Positives = 265/549 (49%), Gaps = 41/549 (7%) Query 31 KTAASADKVRGGYYTPPAVARFLAHWVHQAGPK-ILEPSCGDGRILRELSAITDHAHG-- 87 K ++ K+RGGYYTP +A ++ WV PK ILEPSCGDG ++ AI ++ + Sbjct 4 KADQTSQKLRGGYYTPQNLADYVTKWVLSKNPKTILEPSCGDGVFIQ---AIANNGYNSN 60 Query 88 -----VELVAREAKKS------RDF--ASVDTENLFTWLH---KTQLGSWDGVAGNPPYI 131 EL EA K+ +F A++ + W + K +DG GNPP+I Sbjct 61 IELFCFELFDTEASKALERCKLNNFSNATITEGDFLVWANECLKKNKQIFDGALGNPPFI 120 Query 132 RFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVT 191 R+ ++ A + + L+ TK TNAWVPF+++S L + GGR+G+V+P+E+ V Sbjct 121 RYQFLERNFQEQAQLVFEHLDLKFTKHTNAWVPFLLSSLALLKQGGRIGMVIPSEISHVM 180 Query 192 YAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNA 251 +A LR +L +I ++ + + F+ LQ V+ P + + Sbjct 181 HAQSLRSYLGHVCSKIVIIDPKEIWFEDTLQGAVILLAEKKQYPD-----EASQGVGIVS 235 Query 252 LGDKDFTNESAPALLHE---------KEKWTKYFLDPAQIRLLRGLKQSATMIRLGELAD 302 + +F E L ++ + KWTK L +++L++ + + + ++A Sbjct 236 VSGFEFLQEDPNVLFNDTAGINGETIEGKWTKATLSIDELQLIKRVIAHPDVRKFKDIAK 295 Query 303 VDVGIVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTW 362 VDVGIVTG N++F + + L P+ RS G+IYDE + T Sbjct 296 VDVGIVTGANNYFLVDNETVKLYKLERFAHPMFGRSQHCPGIIYDEKQHVENQEKGLPTN 355 Query 363 LL--DAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAP 420 L D ++ +I GE H YKC IRKPW+ PS++ ++ ML++ H AP Sbjct 356 FLYIDEEFEYLSKSVKNYIKLGEVEEYHKRYKCRIRKPWFKVPSVYSTEIGMLKRCHDAP 415 Query 421 RLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPRE 480 RL N A +TDT +RV L F N T AE+ GR YGGG+LEL P E Sbjct 416 RLIHNRVRAYTTDTAYRVS-STVTSTENLVCSFLNPITVITAELEGRFYGGGVLELVPSE 474 Query 481 AEQLPMPPPAYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 E+L + P G ++++LL+K +I++ + +++D LG + W Sbjct 475 IEKLYI-PIVEGLEHNVEELNLLIKDGQIERVIR-QQGSLILDKLGFTQEENEKLVEIWK 532 Query 541 TLRDRRTKR 549 LRDRR ++ Sbjct 533 KLRDRRLRK 541 >gi|145221937|ref|YP_001132615.1| N-6 DNA methylase [Mycobacterium gilvum PYR-GCK] gi|145214423|gb|ABP43827.1| N-6 DNA methylase [Mycobacterium gilvum PYR-GCK] Length=554 Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 194/546 (36%), Positives = 266/546 (49%), Gaps = 36/546 (6%) Query 34 ASADKVRGGYYTPPAVARFLAHW-VHQAGPKILEPSCGDGRILRELSAITDHAH------ 86 A+ K RG ++TPP VARFL W V G +LEPSCG+ L E+ D Sbjct 10 AALRKSRGAFFTPPPVARFLVDWAVRDPGHAVLEPSCGEAVFLHEIGRRGDGGRPHTGPL 69 Query 87 -GVEL---VAREAKKSRDFASVD-TENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQR 141 GVE+ A A++S A V T + + + G +D V GNPPY+R+ ++A E R Sbjct 70 VGVEIHPGSAAAAEQSLRAAGVGATIHARDFFGHNEFGRYDAVVGNPPYVRYQDFAGESR 129 Query 142 DPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLL 201 A E R G+ + L ++W F V S R GGR+GLV+PAELL V YAA +R+FL+ Sbjct 130 ARAREAALRAGVTLSNLASSWAAFTVHSALHLRTGGRLGLVLPAELLSVNYAAGVRQFLM 189 Query 202 SRYREITLVTFERLVFDGILQEVVL-----FCGVVGPGPAHIRTVRLGDANDLNAL-GDK 255 + + LV F+ VF G+L+EVVL + G G H++ ++ DA L L + Sbjct 190 DHFSSVGLVLFDERVFPGVLEEVVLLLADGYDAAGGNGATHMQLSQVRDAEGLARLTASR 249 Query 256 DFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFF 315 +T + A KW+ L A + S L D +G+VTG N FF Sbjct 250 RWTPPAGGA------KWSAGLLSSAGLSAFDAAVGSDAFTVLETWGDTTLGMVTGSNRFF 303 Query 316 TFTDAKAQALGLRAHCVPLVS--RSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDP 373 T + AK ALGL V +S S L GL A T+L P+ P Sbjct 304 TLSPAKVAALGLAPSDVLSLSPPGSRHLRGLGLTPQALHTLGADGRSTFLFRPKGEPS-P 362 Query 374 ALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTD 433 A +I +GE VH YKC +RKPWW P L DLF+ PR+T N A A + Sbjct 363 AAWHYIRSGEDLDVHQAYKCRVRKPWWRVPYLRPADLFLTYMNADTPRVTSNRAQAHHLN 422 Query 434 TVHRVRL--DPNVDPATLAAVFH-NSATFAFAEIMGRSYGGGILELEPREAEQLPMPPP- 489 +VH V L D D +L + NS T AE +GR+YGGG+L++EPREA+ LP+P P Sbjct 423 SVHGVYLRDDLRRDGMSLLPLAALNSVTLLGAETVGRAYGGGMLKIEPREADVLPVPSPE 482 Query 490 -----AYGSAELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRD 544 A G + V L+ + A+ +VD +L+ L+ R + R L Sbjct 483 LVRRNADGLQAVRSAVAARLRDGRLLDAVALVDDALLLSTSSLTVRQLRALRRDHGALTA 542 Query 545 RRTKRG 550 RR RG Sbjct 543 RRVARG 548 >gi|315446326|ref|YP_004079205.1| type I restriction-modification system methyltransferase subunit [Mycobacterium sp. Spyr1] gi|315264629|gb|ADU01371.1| type I restriction-modification system methyltransferase subunit [Mycobacterium sp. Spyr1] Length=554 Score = 243 bits (619), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 178/479 (38%), Positives = 241/479 (51%), Gaps = 30/479 (6%) Query 34 ASADKVRGGYYTPPAVARFLAHW-VHQAGPKILEPSCGDGRILRELSAITDHAH------ 86 A+ K RG ++TPP VARFL W V G +LEPSCG+ L E+ D Sbjct 10 AALRKSRGAFFTPPPVARFLVDWAVRDPGHAVLEPSCGEAVFLHEIGRRGDGGRPHTGPL 69 Query 87 -GVEL---VAREAKKSRDFASVD-TENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQR 141 GVE+ A A++S A V T + + + G +D V GNPPY+R+ ++A E R Sbjct 70 VGVEIHPGSAAAAEQSLRAAGVGATIHARDFFGHNEFGRYDAVVGNPPYVRYQDFAGESR 129 Query 142 DPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLL 201 A E R G+ + L ++W F V S R GGR+GLV+PAELL V YAA +R+FL+ Sbjct 130 ARAREAALRAGVTLSNLASSWAAFTVHSALHLRTGGRLGLVLPAELLSVNYAAGVRQFLM 189 Query 202 SRYREITLVTFERLVFDGILQEVVL-----FCGVVGPGPAHIRTVRLGDANDLNAL-GDK 255 + + LV F+ VF G+L+EVVL + G G H++ ++ DA L L + Sbjct 190 DHFSSVGLVLFDERVFPGVLEEVVLLLADGYDAAGGNGATHMQLSQVRDAEGLARLTASR 249 Query 256 DFTNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFF 315 +T + A KW+ L A + S L D +G+VTG N FF Sbjct 250 RWTPPAGGA------KWSAGLLSSAGLSAFDAAVGSDAFTVLETWGDTTLGMVTGSNRFF 303 Query 316 TFTDAKAQALGLRAHCVPLVS--RSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDP 373 T + AK ALGL V +S S L GL A T+L P+ P Sbjct 304 TLSPAKVAALGLAPSDVLSLSPPGSRHLRGLGLTPQALHTLGADGRSTFLFRPKGEPS-P 362 Query 374 ALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTD 433 A +I +GE VH YKC +RKPWW P L DLF+ PR+T N A A + Sbjct 363 AAWHYIRSGEDLDVHQAYKCRVRKPWWRVPYLRPADLFLTYMNADTPRVTSNRAQAHHLN 422 Query 434 TVHRVRL--DPNVDPATLAAVFH-NSATFAFAEIMGRSYGGGILELEPREAEQLPMPPP 489 +VH V L D D +L + NS T AE +GR+YGGG+L++EPREA+ LP+P P Sbjct 423 SVHGVYLRDDLRRDGMSLLPLAALNSVTLLGAETVGRAYGGGMLKIEPREADVLPVPSP 481 >gi|120406392|ref|YP_956221.1| methyltransferase small [Mycobacterium vanbaalenii PYR-1] gi|119959210|gb|ABM16215.1| methyltransferase small [Mycobacterium vanbaalenii PYR-1] Length=552 Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 189/541 (35%), Positives = 268/541 (50%), Gaps = 38/541 (7%) Query 38 KVRGGYYTPPAVARFLAHW-VHQAGPKILEPSCGDGRILRELSAITDHAH---GVEL--- 90 K RG ++TP VARFL W V +LEPSCG+ L E+ H GVE+ Sbjct 13 KARGAFFTPTPVARFLTDWAVRHPEHSVLEPSCGEAVFLHEIGQRGGHTGPLVGVEIHPG 72 Query 91 VAREAKKSRDFASVD-TENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPALELMR 149 A E+++S +D T + + + GS+D V GNPPY+R+ ++A E R A + Sbjct 73 SAEESQRSLRARGIDATIHARDFFSHAEFGSYDAVVGNPPYVRYQDFAGEARARARQAAL 132 Query 150 RVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRYREITL 209 R G+ + L ++W F V S R GGR+GLV+PAELL V YAA +R++L+ + ++ L Sbjct 133 RAGVALSNLASSWAAFTVHSALHLRPGGRLGLVLPAELLSVNYAAGVRQYLMDHFGQVGL 192 Query 210 VTFERLVFDGILQEVVLFCG-----VVGPGPAHIRTVRLGDANDLNAL-GDKDFTNESAP 263 V F+ VF G+L+EVVL G G H+R ++ DA L L G + ++ Sbjct 193 VLFDERVFPGVLEEVVLLLADGYQPDGGRGATHMRLSQVRDAAGLARLTGSRRWSPPGNG 252 Query 264 ALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQ 323 A KW+ + A + + + L D +G+VTG N FFT + K Sbjct 253 A------KWSAGLMSAAGLSAFDSVVRGDAFTFLETWGDTTLGMVTGSNRFFTLSPDKVD 306 Query 324 ALGLR-AHCVPLV-SRSAQLSGL-IYDEDCRACDVAGNHRTWLLDAADYPTDPALVAHIT 380 ALGL + +PL S L GL + + RA G T+L AD P+ PA +I Sbjct 307 ALGLAPSDLIPLSPPGSRHLRGLALTPKALRALGEEGRS-TYLFRPADEPS-PAGWHYIA 364 Query 381 AGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRVRL 440 +GE VH YKC +R PWW P L DLF+ PRLT N A ++VH V L Sbjct 365 SGEDLDVHRAYKCRVRTPWWRVPYLRPADLFLTYMNADTPRLTSNRARTHHLNSVHGVYL 424 Query 441 -----DPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAE 495 ++ LA++ NS T AE +GR+YGGG+L++EPREA+ LP+P P Sbjct 425 RDEFRQDGMNLLPLASL--NSVTLLGAETVGRAYGGGMLKIEPREADVLPVPSPDLVRRN 482 Query 496 LAQ------DVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKR 549 Q V L+ + A+ +VD +L+ LS R + R L RR R Sbjct 483 ADQLRRIRPAVATCLRDARLLDAVALVDEVLLLGTSTLSERALRAVRRDHAGLTARRITR 542 Query 550 G 550 G Sbjct 543 G 543 >gi|311741945|ref|ZP_07715755.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311314438|gb|EFQ84345.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length=547 Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 168/527 (32%), Positives = 250/527 (48%), Gaps = 36/527 (6%) Query 38 KVRGGYYTPPAVARFLAHW-VHQAGPKILEPSCGDGRILRE--------------LSAIT 82 K RG ++TPPA+A F+ W V AG ++LEPSCG+ L +S + Sbjct 15 KARGAFFTPPAIADFVVEWAVRGAGERVLEPSCGEAAFLERSVHRLRSLGAESPTVSGVD 74 Query 83 DHAHGVELVAREAKKSRDFASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRD 142 HA V AR +S + + FT + +D V GNPP+IR+ +++ E R Sbjct 75 IHAASVREAARIVTESGGKPDILEGDFFTVPPEP---IYDAVVGNPPFIRYHDFSGEARL 131 Query 143 PALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLS 202 + + G+ + L ++W F V + + GGR+GLVVPAELL V YAA +R FLL Sbjct 132 RSRQAALEAGVSISGLASSWAAFTVHAALFLKVGGRMGLVVPAELLSVNYAAHVRRFLLQ 191 Query 203 RYREITLVTFERLVFDGILQEVVLFC--GVVGPGPAHIRTVRLGDANDLNALGDKDFTNE 260 + + LV F VF + +EVVL G H + +A+DL + + Sbjct 192 SFSRVDLVLFTERVFPEVQEEVVLLLAEGFRQGNTDHANIYQAHNADDLGEV----LASS 247 Query 261 SAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDA 320 + L +KWT L + + L S + L +G+VTG N +F + Sbjct 248 TTWKPLDPADKWTPLLLSREALHVYTDLVASGAYVPLQNWGKTSLGMVTGNNKYFALSPQ 307 Query 321 KAQALGL-RAHCVPLV-SRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPTDPALVAH 378 KA LG+ R V L S L GL + T+L P++ A + Sbjct 308 KAAELGIARNELVRLSPPGSRHLRGLGLSDYAMTEMGRRGSATYLFRPPGEPSEAAQ-RY 366 Query 379 ITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRV 438 I AGE AGV+L YKC +RKPWW P + DL + PR+T N A A ++VH + Sbjct 367 IDAGETAGVNLAYKCRVRKPWWRVPLVKPADLLLTYMNADTPRITTNGAGALHLNSVHGI 426 Query 439 RL---DPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGSAE 495 L ++ L S T AE +GR+YGGG+L++EPREA++LP+P PA +A Sbjct 427 YLRSEHSSLGRELLPLASLTSMTLVGAETVGRAYGGGMLKIEPREADRLPVPSPALVAAN 486 Query 496 ------LAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCR 536 + + LL+ + +A +VD +++ LG+ VA R Sbjct 487 RDALLAVRPQMATLLRNGRLTEAAKIVDEVLMVKSLGMRRNDVATLR 533 >gi|308176337|ref|YP_003915743.1| adenine-specific DNA-methyltransferase [Arthrobacter arilaitensis Re117] gi|307743800|emb|CBT74772.1| putative site-specific DNA-methyltransferase (adenine specific) [Arthrobacter arilaitensis Re117] Length=549 Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 177/549 (33%), Positives = 257/549 (47%), Gaps = 48/549 (8%) Query 34 ASADKVRGGYYTPPAVARFLAHW-VHQAGPKILEPSCGDGRILRELSAITDHAH------ 86 A+A RG Y+TP VA F+A W + Q G ++LEPSCG+ + L ++ D Sbjct 10 ATARHARGAYFTPEPVASFMAQWALGQQGSRVLEPSCGEAQFLAAAHSVLDEQREQLDML 69 Query 87 GVEL------VAREAKKSRDF-ASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASE 139 G+EL AR+ ++ A ++ N F + G +D V GNPPY+R+ Sbjct 70 GLELHEPSVQAARQRMRAAGINARIEQANFF---EVSGHGDFDAVIGNPPYVRYQLHRGA 126 Query 140 QRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREF 199 R + + G+ +L + W FVV +T+ GGR+ LV+PAEL+ V YA +R+ Sbjct 127 DRQLSRAAAKASGVELNELASIWAAFVVHATSFLAVGGRLALVLPAELMFVNYAGPVRQM 186 Query 200 LLSRYREITLVTFERLVFDGILQEVVLFC--GVVGPGPAHIRTVRLGDANDLNALGDKDF 257 LL R+ ++ L FE +F +EVVL G + +A DL LG+ Sbjct 187 LLERFADVHLAVFEERLFADAQEEVVLLLAKGYREGASGSFNLHQFRNAQDLQTLGE--- 243 Query 258 TNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTF 317 P + ++WT +L + M L + +G VTG N +FT Sbjct 244 GVRHTPVRM--SDRWTGSLAGLEAQGILATALAAGRMAPLQSWGETSLGAVTGNNKWFTL 301 Query 318 TDAKAQALGLRAHCVPLVS--RSAQLSGL-IYDEDCRACDVAGNHRTWLLDAADYPTDPA 374 + + LGL + +S S L GL + +ED G T++ A P+ A Sbjct 302 SAGQIHQLGLVREDLIRISPPGSRHLRGLELSEEDWEKLTEHGAA-TYMFRPAAEPS-AA 359 Query 375 LVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDT 434 + +GE V YKC +R PWW P L +PDLFM PRLT N A ++ Sbjct 360 GARLVASGELQNVDQAYKCRVRSPWWRVPVLSVPDLFMTYMNADTPRLTANEAGVHHINS 419 Query 435 VHRVRLDPNVDP---ATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAY 491 +H V L +V L+ N+ + AE++GRSYGGGIL+LEPREA+QLP+P Sbjct 420 IHGVYLGADVRQLGRELLSVASLNTLSMLGAEMVGRSYGGGILKLEPREADQLPVP---- 475 Query 492 GSAELAQ-----------DVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWL 540 S +L Q V LL+ +A D+VD VL LGL VA AA Sbjct 476 -SIDLVQRHAKRLRSIKPTVRELLQQGRKQEATDLVDNVVLKQMLGLDRAAVAAVHAART 534 Query 541 TLRDRRTKR 549 ++ +RR R Sbjct 535 SMLERRKAR 543 >gi|127406|sp|P25240.1|MT57_ECOLX RecName: Full=Modification methylase Eco57IB; Short=M.Eco57IB; AltName: Full=Adenine-specific methyltransferase Eco57IB gi|41320|emb|CAA43433.1| methyltransferase [Escherichia coli] gi|145138|gb|AAA23388.1| methyltransferase [Escherichia coli] Length=544 Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 153/514 (30%), Positives = 245/514 (48%), Gaps = 41/514 (7%) Query 31 KTAASADKVRGGYYTPPAVARFLAHWVHQAGPK-ILEPSCGDGRILRELSAITDHAHG-- 87 K ++ K+RGGYYTP +A ++ WV PK ILEPSCGDG ++ AI ++ + Sbjct 4 KADQTSQKLRGGYYTPQNLADYVTKWVLSKNPKTILEPSCGDGVFIQ---AIANNGYNSN 60 Query 88 -----VELVAREAKKS------RDF--ASVDTENLFTWLH---KTQLGSWDGVAGNPPYI 131 EL EA K+ +F A++ + W + K +DG GNPP+I Sbjct 61 IELFCFELFDTEASKALERCKLNNFSNATITEGDFLVWANECLKKNKQIFDGALGNPPFI 120 Query 132 RFGNWASEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVT 191 R+ ++ A + + L+ TK TNAWVPF+++S L + GGR+G+V+P+E+ V Sbjct 121 RYQFLERNFQEQAQLVFEHLDLKFTKHTNAWVPFLLSSLALLKQGGRIGMVIPSEISHVM 180 Query 192 YAAQLREFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNA 251 +A LR +L +I ++ + + F+ LQ V+ P + + Sbjct 181 HAQSLRSYLGHVCSKIVIIDPKEIWFEDTLQGAVILLAEKKQYPD-----EASQGVGIVS 235 Query 252 LGDKDFTNESAPALLHE---------KEKWTKYFLDPAQIRLLRGLKQSATMIRLGELAD 302 + +F E L ++ + KWTK L +++L++ + + + ++A Sbjct 236 VSGFEFLQEDPNVLFNDTAGINGETVEGKWTKATLSIDELQLIKRVIAHPDVRKFKDIAK 295 Query 303 VDVG-IVTGRNSFFTFTDAKAQALGLRAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRT 361 VDVG G N++F + + L P+ RS G+IYDE + T Sbjct 296 VDVGRYCDGANNYFLVDNETVKLYKLERFAHPMFGRSQHCPGIIYDEKQHIENQEKGLPT 355 Query 362 WLL--DAADYPTDPALVAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFA 419 L D ++ +I GE H YKC IRKPW+ PS++ ++ ML++ H A Sbjct 356 NFLYIDEEFEYLSKSVKNYIKLGEVEEYHKRYKCRIRKPWFKVPSVYSTEIGMLKRCHDA 415 Query 420 PRLTVNAAAATSTDTVHRVRLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPR 479 PRL N A +TDT +RV L F N T AE+ G YGGG+LEL P Sbjct 416 PRLIHNRVRAYTTDTAYRVS-STVTSTENLVCSFLNPITVITAELEGLFYGGGVLELVPS 474 Query 480 EAEQLPMPPPAYGSAELAQDVDLLLKANEIDKAL 513 E E+L + G ++++LL+K +I++ + Sbjct 475 EIEKLYI-LIVEGLEHNVEELNLLIKDGQIERVI 507 >gi|319947854|ref|ZP_08022041.1| hypothetical protein ES5_00957 [Dietzia cinnamea P4] gi|319438460|gb|EFV93393.1| hypothetical protein ES5_00957 [Dietzia cinnamea P4] Length=551 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 183/546 (34%), Positives = 258/546 (48%), Gaps = 47/546 (8%) Query 38 KVRGGYYTPPAVARFLAHW-VHQAGPKILEPSCGDGRIL-------RELSAITDHAHGVE 89 K RG ++TPP +ARF++ W + +ILEPS GD L + L + G E Sbjct 15 KARGAFFTPPPIARFISSWAIRHPSDRILEPSMGDAEFLVHAVERLQSLGRSSPEVFGSE 74 Query 90 LVAREAKKSRD-------FASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRD 142 L A A++ + A VD + F + +D V GNPPYIRF +++ EQR Sbjct 75 LHAWSAERGKQRVAERGGTALVDIGDFFA---REDPCPFDAVIGNPPYIRFQDFSGEQRT 131 Query 143 PALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLS 202 A R G+ T L +AW F V +T GGR+G V+PAE+L YAA +R F+ Sbjct 132 AAQAAALRGGVALTGLASAWAAFTVHATLKLAVGGRLGFVLPAEILTANYAAPVRRFIFD 191 Query 203 RYREITLVTFERLVF-DGILQEVVLFCGVVGPGP---AHIRTVRLGDANDLNALGDKDFT 258 + ++ LV FE VF + + V+L G G A IR VR +A L ++ Sbjct 192 NFGDVELVLFEEKVFGEADTETVLLLASSFGQGATKNAKIRQVR--NAASLTSMPPATVW 249 Query 259 NESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFT 318 PA ++W+ ++ A ++L + L + +GIVTG+NS+F + Sbjct 250 TPEDPA-----DRWSGATVNAAASKVLMDSVPAGHFKALKTWGETTLGIVTGKNSYFAIS 304 Query 319 DAKAQALGLR-AHCVPLV-SRSAQLSGLIYDEDCRACDVAGNHRTWLLDAADYPT-DPAL 375 + L L A VPL SA L GL + A RT L PT D +L Sbjct 305 PEQEIDLALDPAETVPLSPPGSAHLRGLELSDLALAELGRLGKRTRLF----RPTGDMSL 360 Query 376 VA--HITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTD 433 A +I AGE+AGVH YKC +RK WW P L DL + RL N A + Sbjct 361 GARNYIAAGESAGVHNAYKCRVRKTWWLVPLLEPADLLLTYMNADTVRLVSNTARVHHLN 420 Query 434 TVHRVRLDPNVDP---ATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQ--LPMPP 488 +VH V L V L NS T AEI GR+YGGG+L++EP EA++ +P Sbjct 421 SVHGVYLREEVRSIGMELLPIASLNSVTMLSAEIAGRAYGGGVLKMEPGEADRWLVPSLK 480 Query 489 PAYGSAE----LAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRD 544 SAE + + L+ ++D+A+ +VD +L+D LG + V R A L Sbjct 481 AVENSAERLRSIKPQIGGRLRGGKLDEAVKLVDDALLVDVLGFTRSEVHVVREARNELAG 540 Query 545 RRTKRG 550 RR RG Sbjct 541 RRGNRG 546 >gi|295837644|ref|ZP_06824577.1| modification methylase [Streptomyces sp. SPB74] gi|197695990|gb|EDY42923.1| modification methylase [Streptomyces sp. SPB74] Length=543 Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 168/542 (31%), Positives = 259/542 (48%), Gaps = 40/542 (7%) Query 35 SADKVRGGYYTPPAVARFLAHWVHQ-----AGPKILEPSCGDGRILR-----ELSAITDH 84 S DK+RGG+Y+P + + +G +LEPS GDG LR +++A + Sbjct 8 SDDKLRGGFYSPDVLVELCIRRSAELLEGRSGLSVLEPSAGDGAFLRGIRRSDVAACVER 67 Query 85 AHGVELVAREAKKSRDF-------ASVDTENLFTWLHKTQLGSWDGVAGNPPYIRFGNWA 137 VE+ A EA K+ D V EN+ W + + +D V NPPY+RF + Sbjct 68 VEAVEIFAEEAAKAADVLRSMDVRGHVANENVLEW-SQGRAPEFDWVLANPPYVRFQFIS 126 Query 138 SEQRDPALELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLR 197 E + A E+ +G + ++N W+P + S + RDGG +++P E L A +R Sbjct 127 DEDKQRAKEISSGLGATGSSVSNLWIPVFLLSLSKLRDGGVFSVILPTEFLTGISANAVR 186 Query 198 EFLLSRYREITLVTFERLVFDGILQEVVLFCGVVGPGPAHIRTVRLGDANDLNALGDKDF 257 +LL+ ++T+ FE F +LQEV++ G + G VR D N + + Sbjct 187 NWLLAHATDLTIDLFEPGSFPTVLQEVLILSGRLSKGADSGSVVRFHDHNG----SVRSW 242 Query 258 TNESAPALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTF 317 ++ A A WT Y L P Q L ++ + RLG++A V VTG N +F Sbjct 243 SHRVATA----SGTWTSYLLPPEQNDALAAVQSIPAVGRLGDVARFSVSTVTGANGYFCV 298 Query 318 TDAKAQALGLRAHCVPLVSRSAQLSGLIY-DEDCRACDVAGNHRTWLLDAADYPTDPALV 376 A + GL +PL+ R+ GLI+ E+ R AG WLL A + P Sbjct 299 DSALLEDYGLEEWAIPLLPRARHAEGLIFTSEEQRDLADAGRP-AWLLSFAATTSSPE-- 355 Query 377 AHITAGEA--AGVHLG----YKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAAT 430 AH A + GV L +KC +R+PW+ P + DL + ++ + PR+ N A Sbjct 356 AHGPARQYLDEGVRLKIPQRFKCRVREPWYRVPVVPAGDLLLSKRSNRYPRVISNHAKVV 415 Query 431 STDTVHRVRLDPNVDPAT--LAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPP 488 +TDT+++ ++ A A FHNS T AEI GRS+GGG+LEL P E L +P Sbjct 416 TTDTIYKGKILAGAPIAADDFTAAFHNSLTMLSAEIEGRSFGGGVLELVPSEVSTLRVPV 475 Query 489 PAYGSAELAQDVDLLLKANEIDKAL-DVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRT 547 +AEL + +D + + ++ +AL + D+ + L R + A TL DRR Sbjct 476 VPGAAAELPE-LDKISRTHDDPEALIEATDKMLTRLIPELDTRTMGVLSDARHTLMDRRL 534 Query 548 KR 549 +R Sbjct 535 QR 536 >gi|297622882|ref|YP_003704316.1| type I restriction-modification system methyltransferase subunit-like protein [Truepera radiovictrix DSM 17093] gi|297164062|gb|ADI13773.1| type I restriction-modification system methyltransferase subunit-like protein [Truepera radiovictrix DSM 17093] Length=557 Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 185/536 (35%), Positives = 252/536 (48%), Gaps = 27/536 (5%) Query 38 KVRGGYYTPPAVARFLAHWVHQAGP-KILEPSCGDGRILRELSAITDHAHGVELV----- 91 K G +YT AVA F+ W + G ++L+PS G G L A + G Sbjct 17 KAFGAFYTGAAVADFVVRWALRRGSDRVLDPSFGGGVFLAAALARLEALGGGAGGVYGAE 76 Query 92 ---AREAKKSRDFASVDTENL---FTWLHKTQLGSWDGVAGNPPYIRFGNWASEQRDPAL 145 A A+ S + L F L T L D V GNPP+IR+ E R A Sbjct 77 LDGAVHARVSGALPVAPRQLLRADFFDLSPTDLPPLDAVVGNPPFIRYQRLGREARKKAA 136 Query 146 ELMRRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRYR 205 G+ + L ++W FVV S R GGR+G+V+PAEL YA + L YR Sbjct 137 LRALEAGVALSDLASSWAAFVVHSAAFLRPGGRLGMVLPAELGHAGYARPVLAHLSRTYR 196 Query 206 EITLVTFERLVFDGILQEVVLFC----GVVGPGPAHIRTVRLGDANDLNALGDKDFTNES 261 +TL+TF+ +F + Q+ +L G G R+ D L + E+ Sbjct 197 RVTLLTFQERLFPELSQDTLLLLAEDKGAPFEGFFWRDVARVADLATPLPLEPTERLPEA 256 Query 262 APALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAK 321 LL +EK F+ A L R L Q + RLG LA+V +G VTG N FF + Sbjct 257 --PLLEGREKLVTRFVPAAARELYRELAQHPAVTRLGALAEVGIGYVTGANGFFHLAPER 314 Query 322 AQALGL-RAHCVPLVSRSAQLSGLIYDEDCRACDVAGNHRTWLL-----DAADYPTDPAL 375 A+ALGL AH V R A LSGL + E H ++L D PAL Sbjct 315 ARALGLPAAHLQRAVFRGAALSGLRFGEADWHGAARWGHAGYVLHVTGDDVEVSDLAPAL 374 Query 376 VAHITAGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTV 435 A++ AG A GV YKC R PW+ P + PD F+ P+L NAA A + +T+ Sbjct 375 RAYLEAGAAQGVPRAYKCRTRTPWYRVPHVSAPDAFLTYMSGARPQLVANAAGAAAPNTL 434 Query 436 HRVRLDP--NVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGS 493 H VRL P NV LAA++ +S T AE+ G + GGG+L+LEPREA ++ + P S Sbjct 435 HVVRLRPQANVSATALAALWQSSLTRLSAELEGHALGGGMLKLEPREARRVLVATPEV-S 493 Query 494 AELAQDVDLLLKANEIDKALDVVDRHVLIDGLGLSPRLVAGCRAAWLTLRDRRTKR 549 L +++D LL D+ +VD+ +L LGLS + + A TLR RR R Sbjct 494 TGLTEELDELLWQGRTDEVQTIVDKVLLQYALGLSAKACTLLKHAACTLRHRRYYR 549 >gi|269217860|ref|ZP_06161714.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212795|gb|EEZ79135.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 848 str. F0332] Length=601 Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 180/570 (32%), Positives = 258/570 (46%), Gaps = 87/570 (15%) Query 27 TFAGKTAASADKVRGGYYTPPAVARFLAHW-VHQAGPKILEPSCGDGRILR-------EL 78 + + +A+ A K RG ++TP +ARF+ W V +AG +L+PSCGD L EL Sbjct 2 SMSESSASDARKARGAFFTPAPIARFIVDWAVRRAGDSVLDPSCGDAAFLAPAATKLLEL 61 Query 79 SAITDHAHGV------ELVAREAKKSRDFASVDTENLFTWLHKTQ--------------- 117 S++ A V E AR+ K+ R V ++ ++ Sbjct 62 SSVRQVAACVRKPATGEGCARKEKEIRGEGPVGEKSAGREAEVSEAVPREIRVDGVDVDP 121 Query 118 ------------LGS-----------------WDGVAGNPPYIRFGNWASEQRDPALELM 148 LG+ +D V GNPPY+R+ +A R E Sbjct 122 PSAAAARERVVALGAHAHVQVADFFAIPAEARYDAVVGNPPYVRYQGFAGASRTAGREAA 181 Query 149 RRVGLRPTKLTNAWVPFVVASTTLARDGGRVGLVVPAELLQVTYAAQLREFLLSRYREIT 208 R G+ T L ++W PFVV + GGR+G V+PAELL V YAA +R FL + I Sbjct 182 LRAGVSLTALASSWAPFVVHACQFLVRGGRLGFVLPAELLSVNYAAPVRRFLFDSFSGIE 241 Query 209 LVTFERLVFDGILQEVVLFCGV-VGPGPAHIRTVRLGDANDLNALGDKDFTNES----AP 263 LV FE VFD +VVL G +H ++ D DL A + AP Sbjct 242 LVLFESRVFDEAQADVVLLLAEGYGGSTSHAAVRQVRDERDLAAASPRPRAARHDGMWAP 301 Query 264 ALLHEKEKWTKYFLDPAQIRLLRGLKQSATMIRLGELADVDVGIVTGRNSFFTFTDAKAQ 323 A + KWT+ + L L+ S+ + L E V +G VTG N +FT + ++A+ Sbjct 302 A--SPEAKWTELLAPATALANLDELRDSSALTPLSEWGAVKLGAVTGNNGYFTLSPSRAR 359 Query 324 ALGLRAHCVPLVS--RSAQLSGLIYDEDCRACDVAGNH-RTWLLDAADYPTDPALVAHIT 380 LGL + +S S+ L G+ +A + G R LL P A +I Sbjct 360 ELGLDRRDLLRISPAGSSHLRGMSL--TSKALAILGEEGRGTLLFRPRTPLSAAARRYIR 417 Query 381 AGEAAGVHLGYKCSIRKPWWSTPSLWMPDLFMLRQIHFAPRLTVNAAAATSTDTVHRV-- 438 G GV L YKC +R PW+ P +PDLF+ PRL N+A ++VH V Sbjct 418 TGSETGVDLAYKCRVRDPWYIVPLPAVPDLFLTAMNAETPRLVANSARVHHLNSVHGVCL 477 Query 439 -----RLDPNVDPATLAAVFHNSATFAFAEIMGRSYGGGILELEPREAEQLPMPPPAYGS 493 RL + P LA++ NSA+ AE+ GRSYGGGIL+LEP EA + +P P S Sbjct 478 AEELRRLGTELLP--LASL--NSASRLSAELSGRSYGGGILKLEPGEARRWLVPSPTLVS 533 Query 494 AELAQ------DVDLLLKANEIDKALDVVD 517 L + V +L+ E+ +A ++VD Sbjct 534 ERLEELRSIKASVARVLRRGELSRATEMVD 563 Lambda K H 0.321 0.137 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1228723937424 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40