BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3266c
Length=304
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610402|ref|NP_217783.1| dTDP-6-deoxy-L-lyxo-4-hexulose redu... 607 5e-172
gi|254552368|ref|ZP_05142815.1| dTDP-6-deoxy-L-lyxo-4-hexulose r... 606 1e-171
gi|31794446|ref|NP_856939.1| dTDP-rhamnose modification protein ... 605 3e-171
gi|340628244|ref|YP_004746696.1| dTDP-6-deoxy-L-lyxo-4-hexulose ... 602 2e-170
gi|342861470|ref|ZP_08718117.1| dTDP-4-dehydrorhamnose reductase... 439 2e-121
gi|240172502|ref|ZP_04751161.1| putative dTDP-rhamnose modificat... 429 2e-118
gi|254821361|ref|ZP_05226362.1| RmlD [Mycobacterium intracellula... 429 2e-118
gi|183981297|ref|YP_001849588.1| dTDP-6-deoxy-L-lyxo-4-hexulose ... 427 7e-118
gi|118618082|ref|YP_906414.1| dTDP-6-deoxy-L-lyxo-4-hexulose red... 424 9e-117
gi|15827318|ref|NP_301581.1| dTDP-rhamnose modification protein ... 416 3e-114
gi|41409478|ref|NP_962314.1| RmlD [Mycobacterium avium subsp. pa... 397 9e-109
gi|118465938|ref|YP_883372.1| dTDP-4-dehydrorhamnose reductase [... 394 1e-107
gi|254776666|ref|ZP_05218182.1| RmlD [Mycobacterium avium subsp.... 394 1e-107
gi|296168938|ref|ZP_06850607.1| dTDP-4-dehydrorhamnose reductase... 387 2e-105
gi|120402727|ref|YP_952556.1| dTDP-4-dehydrorhamnose reductase [... 347 9e-94
gi|118472789|ref|YP_886196.1| dTDP-4-dehydrorhamnose reductase [... 338 6e-91
gi|315445612|ref|YP_004078491.1| dTDP-4-dehydrorhamnose reductas... 331 7e-89
gi|108798290|ref|YP_638487.1| dTDP-4-dehydrorhamnose reductase [... 326 3e-87
gi|126433957|ref|YP_001069648.1| dTDP-4-dehydrorhamnose reductas... 325 8e-87
gi|333991657|ref|YP_004524271.1| dTDP-6-deoxy-L-lyxo-4-hexulose ... 320 1e-85
gi|169630693|ref|YP_001704342.1| dTDP-rhamnose modification prot... 314 9e-84
gi|145225314|ref|YP_001135992.1| dTDP-4-dehydrorhamnose reductas... 313 2e-83
gi|54026611|ref|YP_120853.1| putative dTDP-4-dehydrorhamnose red... 283 2e-74
gi|325675653|ref|ZP_08155337.1| dTDP-4-dehydrorhamnose reductase... 279 3e-73
gi|312140708|ref|YP_004008044.1| dtdp-4-dehydrorhamnose reductas... 278 1e-72
gi|262201794|ref|YP_003273002.1| dTDP-4-dehydrorhamnose reductas... 275 7e-72
gi|229489527|ref|ZP_04383390.1| dTDP-4-dehydrorhamnose reductase... 274 1e-71
gi|226305634|ref|YP_002765594.1| dTDP-6-deoxy-L-lyxo-4-hexulose ... 267 2e-69
gi|226365778|ref|YP_002783561.1| dTDP-6-deoxy-L-lyxo-4-hexulose ... 266 3e-69
gi|333921472|ref|YP_004495053.1| dTDP-4-dehydrorhamnose reductas... 254 1e-65
gi|258654332|ref|YP_003203488.1| dTDP-4-dehydrorhamnose reductas... 253 3e-65
gi|117927625|ref|YP_872176.1| dTDP-4-dehydrorhamnose reductase [... 251 1e-64
gi|296395056|ref|YP_003659940.1| dTDP-4-dehydrorhamnose reductas... 248 6e-64
gi|343928006|ref|ZP_08767471.1| dTDP-6-deoxy-L-lyxo-4-hexulose r... 247 1e-63
gi|302556045|ref|ZP_07308387.1| dTDP-4-dehydrorhamnose reductase... 245 5e-63
gi|86739428|ref|YP_479828.1| dTDP-4-dehydrorhamnose reductase [F... 244 2e-62
gi|312199899|ref|YP_004019960.1| dTDP-4-dehydrorhamnose reductas... 241 7e-62
gi|256380334|ref|YP_003103994.1| dTDP-4-dehydrorhamnose reductas... 238 9e-61
gi|296138790|ref|YP_003646033.1| dTDP-4-dehydrorhamnose reductas... 238 9e-61
gi|84498709|ref|ZP_00997450.1| dTDP-4-dehydrorhamnose reductase ... 237 1e-60
gi|111023268|ref|YP_706240.1| dTDP-4-dehydrorhamnose reductase [... 237 2e-60
gi|297718754|gb|ADI50278.1| 4-ketoreductase [Streptomyces sp. MK... 236 3e-60
gi|317508993|ref|ZP_07966625.1| RmlD substrate binding domain-co... 236 4e-60
gi|291439684|ref|ZP_06579074.1| dTDP-4-dehydrorhamnose reductase... 233 2e-59
gi|111220689|ref|YP_711483.1| dTDP-4-dehydrorhamnose reductase [... 231 8e-59
gi|257054676|ref|YP_003132508.1| dTDP-4-dehydrorhamnose reductas... 230 2e-58
gi|271962203|ref|YP_003336399.1| dTDP-4-dehydrorhamnose reductas... 229 3e-58
gi|158056583|emb|CAP11383.1| 4-ketoreductase [Streptomyces oliva... 227 2e-57
gi|256397292|ref|YP_003118856.1| dTDP-4-dehydrorhamnose reductas... 226 3e-57
gi|326382032|ref|ZP_08203725.1| dTDP-4-dehydrorhamnose reductase... 225 5e-57
>gi|15610402|ref|NP_217783.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium
tuberculosis H37Rv]
gi|15842856|ref|NP_337893.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis
CDC1551]
gi|148663129|ref|YP_001284652.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis
H37Ra]
57 more sequence titles
Length=304
Score = 607 bits (1566), Expect = 5e-172, Method: Compositional matrix adjust.
Identities = 304/304 (100%), Positives = 304/304 (100%), Gaps = 0/304 (0%)
Query 1 MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN 60
MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN
Sbjct 1 MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN 60
Query 61 CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPY 120
CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPY
Sbjct 61 CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPY 120
Query 121 EPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGR 180
EPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGR
Sbjct 121 EPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGR 180
Query 181 VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ 240
VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ
Sbjct 181 VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ 240
Query 241 RVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLP 300
RVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLP
Sbjct 241 RVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLP 300
Query 301 STRD 304
STRD
Sbjct 301 STRD 304
>gi|254552368|ref|ZP_05142815.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
Length=304
Score = 606 bits (1563), Expect = 1e-171, Method: Compositional matrix adjust.
Identities = 303/304 (99%), Positives = 304/304 (100%), Gaps = 0/304 (0%)
Query 1 MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN 60
MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTS+QWDITDPAAAERIIRHGDVVIN
Sbjct 1 MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSAQWDITDPAAAERIIRHGDVVIN 60
Query 61 CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPY 120
CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPY
Sbjct 61 CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPY 120
Query 121 EPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGR 180
EPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGR
Sbjct 121 EPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGR 180
Query 181 VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ 240
VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ
Sbjct 181 VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ 240
Query 241 RVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLP 300
RVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLP
Sbjct 241 RVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLP 300
Query 301 STRD 304
STRD
Sbjct 301 STRD 304
>gi|31794446|ref|NP_856939.1| dTDP-rhamnose modification protein RmlD [Mycobacterium bovis
AF2122/97]
gi|121639155|ref|YP_979379.1| putative dTDP-rhamnose modification protein rmlD [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224991648|ref|YP_002646337.1| putative dTDP-rhamnose modification protein [Mycobacterium bovis
BCG str. Tokyo 172]
18 more sequence titles
Length=304
Score = 605 bits (1559), Expect = 3e-171, Method: Compositional matrix adjust.
Identities = 303/304 (99%), Positives = 303/304 (99%), Gaps = 0/304 (0%)
Query 1 MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN 60
MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN
Sbjct 1 MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN 60
Query 61 CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPY 120
CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPY
Sbjct 61 CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPY 120
Query 121 EPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGR 180
EPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGR
Sbjct 121 EPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGR 180
Query 181 VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ 240
VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ
Sbjct 181 VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ 240
Query 241 RVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLP 300
RVRPVSSAQFPRPAPR SYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLP
Sbjct 241 RVRPVSSAQFPRPAPRPSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLP 300
Query 301 STRD 304
STRD
Sbjct 301 STRD 304
>gi|340628244|ref|YP_004746696.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RMLD [Mycobacterium
canettii CIPT 140010059]
gi|340006434|emb|CCC45616.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RMLD (dTDP-rhamnose
modification protein) (dTDP-rhamnose biosynthesis protein) (dTDP-rhamnose
synthase) [Mycobacterium canettii CIPT 140010059]
Length=304
Score = 602 bits (1553), Expect = 2e-170, Method: Compositional matrix adjust.
Identities = 302/304 (99%), Positives = 302/304 (99%), Gaps = 0/304 (0%)
Query 1 MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN 60
MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN
Sbjct 1 MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN 60
Query 61 CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPY 120
CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPY
Sbjct 61 CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPY 120
Query 121 EPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGR 180
EPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGR
Sbjct 121 EPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGR 180
Query 181 VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ 240
VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ
Sbjct 181 VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ 240
Query 241 RVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLP 300
RV PVSSAQFPRPAPR SYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLP
Sbjct 241 RVLPVSSAQFPRPAPRPSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLP 300
Query 301 STRD 304
STRD
Sbjct 301 STRD 304
>gi|342861470|ref|ZP_08718117.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium colombiense CECT
3035]
gi|342130959|gb|EGT84248.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium colombiense CECT
3035]
Length=304
Score = 439 bits (1130), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 224/303 (74%), Positives = 251/303 (83%), Gaps = 3/303 (0%)
Query 5 SERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAY 64
S R+VI GAGGQLG +LT+ AA +GRD +A TSSQWDITDPAAAERI+R GDVVINC AY
Sbjct 2 SGRIVIAGAGGQLGGYLTSLAASQGRDAVAFTSSQWDITDPAAAERIVRPGDVVINCGAY 61
Query 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124
TDVDGAE++EA A+AVN TGP H+ARACA+ GA+LIHVSTDYVF+GDFGGA PRPYEP+D
Sbjct 62 TDVDGAETDEAGAFAVNETGPGHIARACAQAGAQLIHVSTDYVFNGDFGGAPPRPYEPSD 121
Query 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184
+TAPQGVYARSK+AGE+AVLAA PEA VVRTAWVYTGGTGKDFVAVMRRLAAG G V+VV
Sbjct 122 QTAPQGVYARSKVAGERAVLAALPEAVVVRTAWVYTGGTGKDFVAVMRRLAAGDGPVNVV 181
Query 185 DDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRP 244
DDQ GSPTYV DLA ALL + D GV G +LHAANEG SRF QARAVFEECGADP+RVRP
Sbjct 182 DDQIGSPTYVGDLAAALLQIVDDGVPGPILHAANEGACSRFEQARAVFEECGADPERVRP 241
Query 245 VSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSAL---ATALAAPANSTSIDRRLPS 301
V++ FPRPAPR +YSALSS Q AG+ PLR WR AL A A + + DR LPS
Sbjct 242 VTTDHFPRPAPRPAYSALSSGQSVAAGMRPLRPWRPALVAALAASHNAAGAVAADRPLPS 301
Query 302 TRD 304
TRD
Sbjct 302 TRD 304
>gi|240172502|ref|ZP_04751161.1| putative dTDP-rhamnose modification protein [Mycobacterium kansasii
ATCC 12478]
Length=304
Score = 429 bits (1104), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 237/303 (79%), Positives = 252/303 (84%), Gaps = 3/303 (0%)
Query 5 SERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAY 64
S R+VITGAGGQLG AQAAR GR++LA TSSQWDITDP AA II+ GDVV+NCAAY
Sbjct 2 SGRIVITGAGGQLGRVAAAQAARAGREVLAQTSSQWDITDPGAAGAIIQTGDVVLNCAAY 61
Query 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124
TDVD AES+EA AYAVNA+GP+HLARACARVGARLIHVSTDYVF+GDF GA+P PYEP D
Sbjct 62 TDVDAAESDEARAYAVNASGPEHLARACARVGARLIHVSTDYVFNGDFNGAQPHPYEPGD 121
Query 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184
TAPQ VYARSKLAGEQAVLAA P+A VVRTAWVYTGG G DFVAVMRRLAAG G +DVV
Sbjct 122 ATAPQSVYARSKLAGEQAVLAALPQAVVVRTAWVYTGGDGTDFVAVMRRLAAGDGPIDVV 181
Query 185 DDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRP 244
DQTGSPTYVADLA ALL +A AGV G VLHAANEG VSRF QA AVFEECGADP+RVRP
Sbjct 182 SDQTGSPTYVADLAAALLEVAGAGVPGGVLHAANEGAVSRFAQACAVFEECGADPRRVRP 241
Query 245 VSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANST---SIDRRLPS 301
VSSAQFPRPAPR SYSAL R WA AGLTPLR WRSALA ALAA + R LPS
Sbjct 242 VSSAQFPRPAPRPSYSALGGRAWAAAGLTPLRPWRSALAAALAAACGAAPGHPAQRPLPS 301
Query 302 TRD 304
TRD
Sbjct 302 TRD 304
>gi|254821361|ref|ZP_05226362.1| RmlD [Mycobacterium intracellulare ATCC 13950]
Length=295
Score = 429 bits (1104), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 224/300 (75%), Positives = 247/300 (83%), Gaps = 6/300 (2%)
Query 5 SERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAY 64
S R+VI GAGGQLG +L++ AA +GR++LA +SSQWDITDPAAA RI++ GDVVINCAAY
Sbjct 2 SGRIVIAGAGGQLGGYLSSLAADQGREVLAHSSSQWDITDPAAAGRIVQRGDVVINCAAY 61
Query 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124
TDVDGAE++EA A+AVN GP H+ARACAR GA+LIHVSTDYVF+GDFGGA PRPYEP+D
Sbjct 62 TDVDGAETDEAGAFAVNEAGPGHIARACARAGAQLIHVSTDYVFNGDFGGAAPRPYEPSD 121
Query 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184
+TAPQGVYARSK AGEQAVLAA PEA VVRTAWVYTGG GKDFVAVMRRLAAG G VDVV
Sbjct 122 QTAPQGVYARSKAAGEQAVLAALPEAVVVRTAWVYTGGAGKDFVAVMRRLAAGDGPVDVV 181
Query 185 DDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRP 244
DDQ GSPTYV DLA ALL + D V G +LHAANEG VSRF QARAVFEECGADP RVRP
Sbjct 182 DDQIGSPTYVGDLAAALLQIVDDRVPGPILHAANEGAVSRFEQARAVFEECGADPARVRP 241
Query 245 VSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPSTRD 304
VS+ QFPRPAPR Y+ALSS Q A AGL PLR WR AL A + DR LPSTRD
Sbjct 242 VSTEQFPRPAPRPPYTALSSGQSAAAGLRPLRPWRPALVAA------LAAADRPLPSTRD 295
>gi|183981297|ref|YP_001849588.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium
marinum M]
gi|183174623|gb|ACC39733.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium
marinum M]
Length=308
Score = 427 bits (1099), Expect = 7e-118, Method: Compositional matrix adjust.
Identities = 236/308 (77%), Positives = 255/308 (83%), Gaps = 4/308 (1%)
Query 1 MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN 60
M GRSERLVITGA GQLG L AQA R GRD+LA TSS+WDITD AA E II GDVVIN
Sbjct 1 MVGRSERLVITGAAGQLGGVLAAQAVRAGRDVLAKTSSEWDITDAAATEEIIGTGDVVIN 60
Query 61 CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFG----GAE 116
CAAYTDVD AES+EA AYAVNATGP++LA+ACAR GA LIHVSTDYVFDGD GA+
Sbjct 61 CAAYTDVDSAESDEARAYAVNATGPENLAKACARAGAALIHVSTDYVFDGDHADLPDGAQ 120
Query 117 PRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAA 176
P+PYEP D+TAPQGVYARSK AGE+AVLAA P+A VVR+AWVYTGGTG DFVA+MRRLAA
Sbjct 121 PQPYEPGDKTAPQGVYARSKFAGERAVLAALPDAVVVRSAWVYTGGTGSDFVAIMRRLAA 180
Query 177 GHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECG 236
G G VDVVDDQTGSPTYVADLA ALL +ADAGVRGR+LHAAN G VSRFG ARAVFEECG
Sbjct 181 GEGPVDVVDDQTGSPTYVADLAAALLEVADAGVRGRLLHAANGGAVSRFGLARAVFEECG 240
Query 237 ADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSID 296
DPQRVRPVS+AQFPRPA R YSAL RQWA AGLTPLR WRSAL ALAA ++
Sbjct 241 TDPQRVRPVSTAQFPRPAVRPGYSALGGRQWAAAGLTPLRPWRSALVAALAAASDRALAG 300
Query 297 RRLPSTRD 304
R +PST D
Sbjct 301 RPVPSTSD 308
>gi|118618082|ref|YP_906414.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium
ulcerans Agy99]
gi|118570192|gb|ABL04943.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium
ulcerans Agy99]
Length=308
Score = 424 bits (1090), Expect = 9e-117, Method: Compositional matrix adjust.
Identities = 234/308 (76%), Positives = 253/308 (83%), Gaps = 4/308 (1%)
Query 1 MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN 60
M GRSERLVI GA GQLG L AQA R GRD+LA TSS+WDITD AA E II GDVVIN
Sbjct 1 MVGRSERLVIAGAAGQLGGVLAAQAVRAGRDVLAKTSSEWDITDAAATEEIIGTGDVVIN 60
Query 61 CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFG----GAE 116
CAAYTDVD AES+EA AYAVNATGP++LA+ACAR GA LIHVSTDYVFDGD GA+
Sbjct 61 CAAYTDVDSAESDEARAYAVNATGPENLAKACARAGAALIHVSTDYVFDGDHADLPDGAQ 120
Query 117 PRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAA 176
P+PYEP D+TAPQGVYARSK AGE+AVLAA P+A VVR+AWVYTGGTG DFVA+MRRLAA
Sbjct 121 PQPYEPGDKTAPQGVYARSKFAGERAVLAALPDAVVVRSAWVYTGGTGSDFVAIMRRLAA 180
Query 177 GHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECG 236
G G VDVVDDQTGSPTYVADLA ALL +ADAGVRGR+LHAAN G VSRFG ARAVFEECG
Sbjct 181 GEGPVDVVDDQTGSPTYVADLAAALLEVADAGVRGRLLHAANGGAVSRFGLARAVFEECG 240
Query 237 ADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSID 296
DPQRVRPVS+AQFPRP R YSAL RQWA AGLTPLR WRSAL ALAA ++
Sbjct 241 TDPQRVRPVSTAQFPRPVVRPGYSALGGRQWAAAGLTPLRPWRSALVAALAAASDRALAG 300
Query 297 RRLPSTRD 304
R +PST D
Sbjct 301 RPVPSTSD 308
>gi|15827318|ref|NP_301581.1| dTDP-rhamnose modification protein [Mycobacterium leprae TN]
gi|221229796|ref|YP_002503212.1| putative dTDP-rhamnose modification protein [Mycobacterium leprae
Br4923]
gi|13092867|emb|CAC30260.1| putative dTDP-rhamnose modification protein [Mycobacterium leprae]
gi|219932903|emb|CAR70845.1| putative dTDP-rhamnose modification protein [Mycobacterium leprae
Br4923]
Length=311
Score = 416 bits (1068), Expect = 3e-114, Method: Compositional matrix adjust.
Identities = 233/312 (75%), Positives = 250/312 (81%), Gaps = 9/312 (2%)
Query 1 MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERI----IRHGD 56
M+ RS RLVITGAGGQLGS L AQA GRD+LALTSSQWDITD A AER+ ++ D
Sbjct 1 MSDRSGRLVITGAGGQLGSALAAQATAAGRDVLALTSSQWDITDAAVAERMGRSALKKND 60
Query 57 VVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFG-GA 115
VV+NCAAYT+VDGAESNE AYAVNATGP+++ARAC GA LIHVSTDYVF GDFG GA
Sbjct 61 VVVNCAAYTNVDGAESNELAAYAVNATGPEYIARACRCAGAALIHVSTDYVFSGDFGSGA 120
Query 116 E---PRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMR 172
PRPYEPTDET P GVY RSKLAGEQAVLAA PEA VVRTAWVYTGGTGKDFVAVMR
Sbjct 121 NRVAPRPYEPTDETGPLGVYGRSKLAGEQAVLAAMPEATVVRTAWVYTGGTGKDFVAVMR 180
Query 173 RLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVF 232
RLAAG G V VVDDQ GSPTYV DLA ALL +AD V G VLHAANEG VSRFGQARAVF
Sbjct 181 RLAAGDGPVYVVDDQIGSPTYVVDLAAALLQVADGSVHGSVLHAANEGEVSRFGQARAVF 240
Query 233 EECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANS 292
EECGADP +V+PVS+AQ PR A R +YSALS RQ AGLTPLR WRSAL ALA + S
Sbjct 241 EECGADPLQVQPVSTAQNPRSAARPAYSALSGRQSVAAGLTPLRPWRSALVEALAV-SRS 299
Query 293 TSIDRRLPSTRD 304
+DR LPSTRD
Sbjct 300 LPVDRPLPSTRD 311
>gi|41409478|ref|NP_962314.1| RmlD [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41398309|gb|AAS05930.1| RmlD [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336459657|gb|EGO38592.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium avium subsp.
paratuberculosis S397]
Length=307
Score = 397 bits (1021), Expect = 9e-109, Method: Compositional matrix adjust.
Identities = 222/306 (73%), Positives = 244/306 (80%), Gaps = 6/306 (1%)
Query 5 SERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAY 64
S R+VI GAGGQLG +L+A AA +GRD++ALTS+QWDITDPAAAE I+R GDVVINCAAY
Sbjct 2 SGRIVIAGAGGQLGGYLSALAAGQGRDVVALTSAQWDITDPAAAEHIVRPGDVVINCAAY 61
Query 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDF-GGA--EPRPYE 121
TDVDGAES+EA A+AVN GP H+ARACAR GARL+HVSTDYVF G+ GA PRPYE
Sbjct 62 TDVDGAESDEAGAFAVNEAGPGHIARACARAGARLLHVSTDYVFGGESPAGAPDRPRPYE 121
Query 122 PTDETAPQGVYARSKLAGEQAVLAAFPEAA---VVRTAWVYTGGTGKDFVAVMRRLAAGH 178
P D APQGVYARSK+AGE+AVLAA P+ A VVRTAWVYTGGTGKDFVAVMRRLAAG
Sbjct 122 PGDPVAPQGVYARSKVAGERAVLAALPDPAQGVVVRTAWVYTGGTGKDFVAVMRRLAAGE 181
Query 179 GRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGAD 238
G V VVDDQ GSPTYV DLA ALL + D V G VLHAANEG VSRF QARAVFEECGAD
Sbjct 182 GPVQVVDDQIGSPTYVGDLAAALLQIVDDRVPGPVLHAANEGAVSRFEQARAVFEECGAD 241
Query 239 PQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRR 298
P RVRPV + FPRPAPR +YSAL SR+ A AGL PLR WR AL AL + + DR
Sbjct 242 PARVRPVGTEHFPRPAPRPTYSALGSRESAAAGLRPLRPWRPALVAALTNAGSPAAADRP 301
Query 299 LPSTRD 304
LPSTRD
Sbjct 302 LPSTRD 307
>gi|118465938|ref|YP_883372.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium avium 104]
gi|118167225|gb|ABK68122.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium avium 104]
Length=302
Score = 394 bits (1011), Expect = 1e-107, Method: Compositional matrix adjust.
Identities = 219/302 (73%), Positives = 242/302 (81%), Gaps = 6/302 (1%)
Query 9 VITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTDVD 68
+I GAGGQLG +++A AA +GRD++ALTS+QWDITDPAAAERI+R GDVVINCAAYTDVD
Sbjct 1 MIAGAGGQLGGYVSALAADQGRDVVALTSAQWDITDPAAAERIVRPGDVVINCAAYTDVD 60
Query 69 GAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDF-GGA--EPRPYEPTDE 125
GAES+EA A+AVN GP H+ARACAR GARL+HVSTDYVF G+ GA PRPYEP D
Sbjct 61 GAESDEAGAFAVNEAGPGHIARACARAGARLLHVSTDYVFGGESPAGAPDRPRPYEPGDP 120
Query 126 TAPQGVYARSKLAGEQAVLAAFPEAA---VVRTAWVYTGGTGKDFVAVMRRLAAGHGRVD 182
APQGVYARSK+AGE+AVLAA P+ A VVRTAWVYTGGTGKDFVAVMRRLAAG G V
Sbjct 121 VAPQGVYARSKVAGERAVLAALPDPAQGVVVRTAWVYTGGTGKDFVAVMRRLAAGEGPVQ 180
Query 183 VVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRV 242
VVDDQ GSPTYV DLA ALL + D V G VLHAANEG VSRF QARAVFEECGADP RV
Sbjct 181 VVDDQIGSPTYVGDLAAALLQIVDDRVPGPVLHAANEGAVSRFEQARAVFEECGADPARV 240
Query 243 RPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPST 302
RPV + FPRPAPR +YSAL SR+ A AGL PLR WR AL AL + + DR LPST
Sbjct 241 RPVGTEHFPRPAPRPTYSALGSRESAAAGLRPLRPWRPALVAALTNAGSPAAADRPLPST 300
Query 303 RD 304
RD
Sbjct 301 RD 302
>gi|254776666|ref|ZP_05218182.1| RmlD [Mycobacterium avium subsp. avium ATCC 25291]
Length=302
Score = 394 bits (1011), Expect = 1e-107, Method: Compositional matrix adjust.
Identities = 219/302 (73%), Positives = 242/302 (81%), Gaps = 6/302 (1%)
Query 9 VITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTDVD 68
+I GAGGQLG +++A AA +GRD++ALTS+QWDITDPAAAERI+R GDVVINCAAYTDVD
Sbjct 1 MIAGAGGQLGGYVSALAAGQGRDVVALTSAQWDITDPAAAERIVRPGDVVINCAAYTDVD 60
Query 69 GAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDF-GGA--EPRPYEPTDE 125
GAES+EA A+AVN GP H+ARACAR GARL+HVSTDYVF G+ GA PRPYEP D
Sbjct 61 GAESDEAGAFAVNEAGPGHIARACARAGARLLHVSTDYVFGGESPAGAPDRPRPYEPGDP 120
Query 126 TAPQGVYARSKLAGEQAVLAAFPEAA---VVRTAWVYTGGTGKDFVAVMRRLAAGHGRVD 182
APQGVYARSK+AGE+AVLAA P+ A VVRTAWVYTGGTGKDFVAVMRRLAAG G V
Sbjct 121 VAPQGVYARSKVAGERAVLAALPDPAQGVVVRTAWVYTGGTGKDFVAVMRRLAAGEGPVQ 180
Query 183 VVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRV 242
VVDDQ GSPTYV DLA ALL + D V G VLHAANEG VSRF QARAVFEECGADP RV
Sbjct 181 VVDDQIGSPTYVGDLAAALLQIVDDRVPGPVLHAANEGAVSRFEQARAVFEECGADPARV 240
Query 243 RPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPST 302
RPV + FPRPAPR +YSAL SR+ A AGL PLR WR AL AL + + DR LPST
Sbjct 241 RPVGTEHFPRPAPRPTYSALGSRESAAAGLRPLRPWRPALVAALTNAGSPAAADRPLPST 300
Query 303 RD 304
RD
Sbjct 301 RD 302
>gi|296168938|ref|ZP_06850607.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896407|gb|EFG76060.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=296
Score = 387 bits (993), Expect = 2e-105, Method: Compositional matrix adjust.
Identities = 213/300 (71%), Positives = 238/300 (80%), Gaps = 5/300 (1%)
Query 5 SERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAY 64
S R+VI G GGQLG L + AA +GRD+LALTSS+WDITDPAAAERI+ GDVVINCAAY
Sbjct 2 SSRIVIAGGGGQLGGFLRSLAASQGRDVLALTSSEWDITDPAAAERIVEPGDVVINCAAY 61
Query 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124
T+VDGAES+EA AYAVNATGP ++A+ACAR GAR IHVSTDYVF GD G RP+EP+D
Sbjct 62 TNVDGAESDEAGAYAVNATGPGNIAKACARAGARFIHVSTDYVFGGDHAGGA-RPHEPSD 120
Query 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184
TAP GVY RSKLAGEQAVL A P A VVRTAWVYTGG GKDFVAVMRRLAAG G V VV
Sbjct 121 PTAPAGVYGRSKLAGEQAVLTALPGAVVVRTAWVYTGGDGKDFVAVMRRLAAGDGPVKVV 180
Query 185 DDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRP 244
DQ GSPTYV DLAEALL + D V G +LHAANEG VSRF Q RA+F ECGADP+RV P
Sbjct 181 ADQVGSPTYVGDLAEALLQIVDDDVPGPILHAANEGAVSRFEQTRAIFAECGADPERVLP 240
Query 245 VSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPSTRD 304
VS+A+FPRPAPR +YSALS R+ A AGL PLR WR+AL A +++ R LPSTRD
Sbjct 241 VSTAEFPRPAPRPAYSALSGRESAAAGLRPLRPWRAALVAA----LAASAGARPLPSTRD 296
>gi|120402727|ref|YP_952556.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium vanbaalenii PYR-1]
gi|119955545|gb|ABM12550.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium vanbaalenii PYR-1]
Length=284
Score = 347 bits (891), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 186/281 (67%), Positives = 211/281 (76%), Gaps = 4/281 (1%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTD 66
R+VI+GAGG +G L QA R GRD++ALTS+QWDITD A AER+I GDVV+NCAA+T
Sbjct 4 RIVISGAGGLVGRVLAGQARRAGRDVVALTSAQWDITDRAQAERVIAAGDVVVNCAAFTK 63
Query 67 VDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDET 126
VD AE+ A+AVNA G ++A+ACAR GA LIH+STDYVF G + RPYE DET
Sbjct 64 VDAAEAEPDRAHAVNAVGAGNVAQACARAGASLIHLSTDYVFSG----SRRRPYEIDDET 119
Query 127 APQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDD 186
P VY R+KLAGEQAVLAA P+A VVRTAW+Y GG G DF AVMRR A G G V+VV D
Sbjct 120 GPLSVYGRTKLAGEQAVLAALPDAYVVRTAWIYEGGAGTDFAAVMRRAAQGDGTVEVVAD 179
Query 187 QTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVS 246
Q GSPTYV DL ALL +AD GVRG VLHAAN G VSRF QA+AVF E GADP RVRPV
Sbjct 180 QIGSPTYVGDLCRALLQIADGGVRGPVLHAANLGAVSRFDQAQAVFAELGADPSRVRPVG 239
Query 247 SAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALA 287
S + PRPAPR +YSALS + A AGLTPLR WR ALA ALA
Sbjct 240 SDRHPRPAPRPAYSALSPVKSAEAGLTPLRPWRDALAEALA 280
>gi|118472789|ref|YP_886196.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium smegmatis str.
MC2 155]
gi|310947300|sp|A0QTF8.1|RMLD_MYCS2 RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose
reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose
reductase; AltName: Full=dTDP-6-deoxy-L-mannose
dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase
gi|118174076|gb|ABK74972.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium smegmatis str.
MC2 155]
Length=327
Score = 338 bits (867), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 188/300 (63%), Positives = 214/300 (72%), Gaps = 8/300 (2%)
Query 5 SERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAY 64
++R+VITGAGG +G L QAA +G +LALTSSQ DITD A R + +GDVVINCAAY
Sbjct 33 AQRIVITGAGGMVGRVLADQAAAKGHTVLALTSSQCDITDEDAVRRFVANGDVVINCAAY 92
Query 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPR--PYEP 122
T VD AE A+AVNA GP +LA+ACA V A LIH+STDYVF GA R PYE
Sbjct 93 TQVDKAEDEPERAHAVNAVGPGNLAKACAAVDAGLIHISTDYVF-----GAVDRDTPYEV 147
Query 123 TDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVD 182
DET P +Y R+KLAGEQAVLAA P+A VVRTAWVY GG G DFVA MRRLAAG G +D
Sbjct 148 DDETGPVNIYGRTKLAGEQAVLAAKPDAYVVRTAWVYRGGDGSDFVATMRRLAAGDGAID 207
Query 183 VVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRV 242
VV DQ GSPTY DL ALL + D GV +LHAAN GV SRF QARA FE GADP+RV
Sbjct 208 VVADQVGSPTYTGDLVGALLQIVDGGVEPGILHAANAGVASRFDQARATFEAVGADPERV 267
Query 243 RPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPST 302
RP S + PRPAPR SY+ LSS++ A AGLTPLR WR AL A+AA +T+ D LPST
Sbjct 268 RPCGSDRHPRPAPRPSYTVLSSQRSAQAGLTPLRDWREALQDAVAAVVGATT-DGPLPST 326
>gi|315445612|ref|YP_004078491.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1]
gi|315263915|gb|ADU00657.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1]
Length=287
Score = 331 bits (849), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 175/288 (61%), Positives = 209/288 (73%), Gaps = 4/288 (1%)
Query 5 SERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAY 64
S R+VI GAGG +G L QA R+GRD++ALTSS WDIT+P + ER + GD+V+NCAA
Sbjct 2 SGRIVIVGAGGLVGRVLAGQAGRQGRDVVALTSSDWDITEPGSGERHLAAGDIVVNCAAI 61
Query 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124
T+VD AE+ + AVNA G ++A ACARVGA LIH+STDYVF GD RPY+ D
Sbjct 62 TNVDLAEAVPERSRAVNAVGAGNVALACARVGATLIHLSTDYVFGGD----STRPYDIDD 117
Query 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184
E AP VY R+KLAGE AVLAA P+A VVRT+W++ GG G DF AVMRR AAG G +++V
Sbjct 118 EPAPLSVYGRTKLAGEHAVLAALPDAHVVRTSWIFEGGNGADFAAVMRRAAAGSGDIEMV 177
Query 185 DDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRP 244
DQ GSPTYV DL ALL +AD GVRG +LHAAN G SRF QA+AVF E GADP RV P
Sbjct 178 ADQIGSPTYVGDLCAALLQIADGGVRGPLLHAANAGSASRFDQAQAVFAELGADPGRVHP 237
Query 245 VSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANS 292
+S + PRPAPR SYSAL++ + AGLTPLR WR+ALA ALA S
Sbjct 238 ISGDRHPRPAPRPSYSALAATKSTAAGLTPLRPWRAALAEALATMGGS 285
>gi|108798290|ref|YP_638487.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. MCS]
gi|119867386|ref|YP_937338.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. KMS]
gi|108768709|gb|ABG07431.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. MCS]
gi|119693475|gb|ABL90548.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. KMS]
Length=287
Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/281 (67%), Positives = 203/281 (73%), Gaps = 0/281 (0%)
Query 6 ERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYT 65
+RLVITGAGG +G L AQA R+GRD+ ALTSS DITD AA R + GDVV+NCAAYT
Sbjct 3 QRLVITGAGGMVGRILAAQARRQGRDVSALTSSDCDITDTAAVARAVAAGDVVVNCAAYT 62
Query 66 DVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDE 125
DVD AES A+AVNA GP +LA CARVGA LIHVSTDYVF GDFGGA P PYE D
Sbjct 63 DVDRAESEPERAHAVNAVGPGNLAAVCARVGAGLIHVSTDYVFSGDFGGASPHPYEIDDA 122
Query 126 TAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVD 185
AP VY R+KLAGE+AVL A P VVRTAWVY G G DFVA MRR A G VDVV
Sbjct 123 PAPLSVYGRTKLAGERAVLDALPHGYVVRTAWVYEGADGTDFVAAMRRKALGADTVDVVA 182
Query 186 DQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPV 245
DQ GSPT DL ALL +AD GVRG +LHAAN+G SRF QARAVFE GADP+RVRPV
Sbjct 183 DQIGSPTSAHDLVAALLEIADGGVRGPLLHAANDGQASRFDQARAVFETVGADPERVRPV 242
Query 246 SSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
S + PRPAPR +YSALS A GLT LR WR AL +AL
Sbjct 243 GSDRVPRPAPRPAYSALSGAGSAACGLTALRPWREALVSAL 283
>gi|126433957|ref|YP_001069648.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. JLS]
gi|126233757|gb|ABN97157.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. JLS]
Length=287
Score = 325 bits (832), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 185/281 (66%), Positives = 203/281 (73%), Gaps = 0/281 (0%)
Query 6 ERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYT 65
+RLVITGAGG +G L AQA R+GRD+ ALTSS DITD AA R + GDVV+NCAA+T
Sbjct 3 QRLVITGAGGMVGRILAAQARRQGRDVSALTSSDCDITDTAAVARAVAAGDVVVNCAAFT 62
Query 66 DVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDE 125
DVD AES A+AVNA GP +LA CARVGA LIHVSTDYVF GDFGGA P PYE D
Sbjct 63 DVDRAESEPERAHAVNAVGPGNLAAVCARVGAGLIHVSTDYVFSGDFGGASPHPYEIDDA 122
Query 126 TAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVD 185
AP VY R+KLAGE+AVL A P VVRTAWVY G G DFVA MRR A G VDVV
Sbjct 123 PAPLSVYGRTKLAGERAVLDALPHGYVVRTAWVYEGADGTDFVAAMRRKALGADTVDVVA 182
Query 186 DQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPV 245
DQ GSPT DL ALL +AD GVRG +LHAAN+G SRF QARAVFE GADP+RVRPV
Sbjct 183 DQIGSPTSAHDLVAALLEIADGGVRGPLLHAANDGQASRFDQARAVFETVGADPERVRPV 242
Query 246 SSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
S + PRPAPR +YSALS A GLT LR WR AL +AL
Sbjct 243 GSDRVPRPAPRPAYSALSGAGSAACGLTALRPWREALVSAL 283
>gi|333991657|ref|YP_004524271.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium
sp. JDM601]
gi|333487625|gb|AEF37017.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium
sp. JDM601]
Length=289
Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 185/287 (65%), Positives = 211/287 (74%), Gaps = 2/287 (0%)
Query 3 GRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERI-IRHGDVVINC 61
G +R+VITGA GQLG LT +AA GRD+LAL+S+Q DITDP A + + +R GD+++NC
Sbjct 2 GALQRIVITGARGQLGRFLTGRAAEAGRDVLALSSAQCDITDPGAVDAVDLRAGDLLVNC 61
Query 62 AAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYE 121
AAYT VD AE++ A+AVNA GP HLA ACAR GARLIH+STDYVFDGDFGGA PRPYE
Sbjct 62 AAYTAVDAAETDPERAHAVNAAGPGHLAAACARAGARLIHISTDYVFDGDFGGAPPRPYE 121
Query 122 PTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGT-GKDFVAVMRRLAAGHGR 180
P D T P VY +KLAGE+AVLA P+A VVRTAWVYTG G DFVAVMR A
Sbjct 122 PGDPTRPLSVYGDTKLAGEKAVLAGSPDALVVRTAWVYTGAVGGSDFVAVMRARAEADET 181
Query 181 VDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQ 240
V+VVDDQ GSPTYV DLA+ALL LA+A R+LHAAN G SR+ QARAVF GAD
Sbjct 182 VEVVDDQIGSPTYVGDLADALLRLAEAWPAARLLHAANAGAASRYEQARAVFTALGADAD 241
Query 241 RVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALA 287
RVRPVSS PRPA R +YSALS AGL PLR WR ALA A+A
Sbjct 242 RVRPVSSTANPRPAARPAYSALSGVDSGRAGLAPLRPWRDALAAAVA 288
>gi|169630693|ref|YP_001704342.1| dTDP-rhamnose modification protein RmlD [Mycobacterium abscessus
ATCC 19977]
gi|169242660|emb|CAM63688.1| Possible DTDP-rhamnose modification protein RmlD [Mycobacterium
abscessus]
Length=282
Score = 314 bits (805), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 180/280 (65%), Positives = 202/280 (73%), Gaps = 1/280 (0%)
Query 8 LVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTDV 67
LVITGAGGQLG+HL A+A + ALTSS WDIT + ++ GD+VINCAAYT V
Sbjct 2 LVITGAGGQLGTHLIARAKLRDLPVRALTSSDWDITRDGTPDGVVAEGDIVINCAAYTAV 61
Query 68 DGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETA 127
D AE +E+ AYAVNA G + +ARAC VGARLIH+STDYVFDG+FG A PRPY P D TA
Sbjct 62 DAAEEDESRAYAVNAEGAERVARACRDVGARLIHISTDYVFDGEFGDAGPRPYRPGDATA 121
Query 128 PQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDDQ 187
PQGVYAR+K+AGE AV P A VVRTAWVYTG G DFV VMRRLAAG G V VV DQ
Sbjct 122 PQGVYARTKVAGELAVHGVLPSAQVVRTAWVYTGVNG-DFVGVMRRLAAGEGPVRVVTDQ 180
Query 188 TGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVSS 247
TGSPTY DLAEALL LA + VR LHAA G V+RF A+AVFE GAD R++P S
Sbjct 181 TGSPTYAVDLAEALLDLAASDVREPFLHAAGSGHVNRFEWAKAVFELVGADASRLQPCLS 240
Query 248 AQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALA 287
FPRPAPR +Y+AL WA AGL LR WR ALA ALA
Sbjct 241 VDFPRPAPRPAYTALDGDHWADAGLPRLRPWRDALAEALA 280
>gi|145225314|ref|YP_001135992.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium gilvum PYR-GCK]
gi|145217800|gb|ABP47204.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium gilvum PYR-GCK]
Length=274
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/267 (62%), Positives = 196/267 (74%), Gaps = 1/267 (0%)
Query 21 LTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTDVDGAESNEAVAYAV 80
L QA R+GRD++ALTS WDIT+ + R+ GD+V+NCAA T+VD AE+ + AV
Sbjct 2 LAGQARRQGRDVVALTSRDWDITEQGSEPRLA-AGDIVVNCAAITNVDLAEAVPERSRAV 60
Query 81 NATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETAPQGVYARSKLAGE 140
NA G ++ARACA+VGA LIH+STDYVF G FGG RPY+ DE AP VY R+KLAGE
Sbjct 61 NAVGAGNVARACAQVGASLIHLSTDYVFSGVFGGDSTRPYDIDDEPAPLSVYGRTKLAGE 120
Query 141 QAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDDQTGSPTYVADLAEA 200
AVLAA P A VVRT+W++ GG G DF AVMRR AAG G +++V DQ GSPTYV DL A
Sbjct 121 HAVLAALPNAYVVRTSWIFEGGNGADFAAVMRRAAAGSGDIEMVADQIGSPTYVGDLCAA 180
Query 201 LLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVSSAQFPRPAPRSSYS 260
LL +AD GVRG +LHAAN G SRF QA+AVF E GADP RV P+S + PRPAPR SYS
Sbjct 181 LLQIADGGVRGPLLHAANAGSASRFDQAQAVFAELGADPGRVHPISGDRHPRPAPRPSYS 240
Query 261 ALSSRQWALAGLTPLRHWRSALATALA 287
AL++ + AGLTPLR WR+ALA ALA
Sbjct 241 ALAATKSTAAGLTPLRPWRAALAEALA 267
>gi|54026611|ref|YP_120853.1| putative dTDP-4-dehydrorhamnose reductase [Nocardia farcinica
IFM 10152]
gi|54018119|dbj|BAD59489.1| putative dTDP-4-dehydrorhamnose reductase [Nocardia farcinica
IFM 10152]
Length=285
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/281 (62%), Positives = 187/281 (67%), Gaps = 11/281 (3%)
Query 7 RLVITGAGGQLGSHLTAQAAR-EGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYT 65
RLV+TGA GQ+G HL A G D L DITD A ++ GDVVINCAAYT
Sbjct 12 RLVVTGAAGQVGRHLMRLAPHARGYDRAHL-----DITDADAVRAVVHPGDVVINCAAYT 66
Query 66 DVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDE 125
VD AE+ A+AVN TGP LA ACAR GARLIH+STDYVF GG PYEPTD
Sbjct 67 AVDKAETEPDAAFAVNGTGPAVLASACARAGARLIHLSTDYVF----GGTHTDPYEPTDP 122
Query 126 TAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVD 185
TAP Y RSKLAGE+AVL P A VVRTAWVYTG G DFVA MRR AA VDVVD
Sbjct 123 TAPASAYGRSKLAGERAVLDLAPAAHVVRTAWVYTGDRG-DFVATMRRFAAERPTVDVVD 181
Query 186 DQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPV 245
DQ GSPTY ADLA LL LA +LHA N G S F ARAVF E GADP+RVRP
Sbjct 182 DQIGSPTYAADLAAGLLELAATPAAPPLLHATNAGTASWFELARAVFAEIGADPERVRPC 241
Query 246 SSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
+S+ FPRPAPR +YS LS+R W AGLTPLR WR+AL AL
Sbjct 242 ASSAFPRPAPRPAYSVLSNRAWVAAGLTPLRPWRAALHEAL 282
>gi|325675653|ref|ZP_08155337.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus equi ATCC 33707]
gi|325553624|gb|EGD23302.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus equi ATCC 33707]
Length=297
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/282 (58%), Positives = 191/282 (68%), Gaps = 2/282 (0%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTD 66
R+++TGA GQLG L A G + + S++ DITD A + + G VV+NCAAYT
Sbjct 14 RILVTGARGQLGGRLVQCAETAGLPVEGVGSAELDITDAGAVDSWVAPGAVVVNCAAYTA 73
Query 67 VDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDET 126
VD AE++EA A AVN TG ++LA AC++ GA LIHVSTDYVF GD GA+ PYEP D T
Sbjct 74 VDAAETDEAAATAVNETGARNLASACSKAGADLIHVSTDYVFSGDRAGADAAPYEPGDPT 133
Query 127 APQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDD 186
P+ Y R+KLAGE A+ A P+A +VRTAWVYT G+G DFVA M RL V VVDD
Sbjct 134 GPRTAYGRTKLAGELAIRAVLPDAHIVRTAWVYT-GSGTDFVATMLRLEKEKDTVSVVDD 192
Query 187 QTGSPTYVADLAEALLALADAGVR-GRVLHAANEGVVSRFGQARAVFEECGADPQRVRPV 245
Q GSPTY ADLA LL LA G R G LHA N G + F ARAVF GADP+RVRP
Sbjct 193 QVGSPTYAADLAAGLLELARVGGRPGATLHATNAGSATWFDLARAVFAGVGADPERVRPC 252
Query 246 SSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALA 287
+SA+F RPAPR +YS LS R W AGLTPLR WR ALA ALA
Sbjct 253 TSAEFVRPAPRPAYSVLSPRAWEAAGLTPLRPWRDALADALA 294
>gi|312140708|ref|YP_004008044.1| dtdp-4-dehydrorhamnose reductase rmld [Rhodococcus equi 103S]
gi|311890047|emb|CBH49365.1| putative dTDP-4-dehydrorhamnose reductase RmlD [Rhodococcus equi
103S]
Length=292
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/282 (58%), Positives = 190/282 (68%), Gaps = 2/282 (0%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTD 66
R+++TGA GQLG L A G + + S++ DITD A + + G VV+NCAAYT
Sbjct 9 RILVTGARGQLGGRLVQCAEAAGLPVEGVGSAELDITDAGAVDSWVAPGAVVVNCAAYTA 68
Query 67 VDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDET 126
VD AE++EA A AVN TG ++LA AC++ GA LIHVSTDYVF GD GA+ PYEP D T
Sbjct 69 VDAAETDEAAATAVNETGARNLASACSKAGADLIHVSTDYVFSGDRAGADAAPYEPGDPT 128
Query 127 APQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDD 186
P+ Y R+KLAGE A+ A P+A +VRTAWVYT G+G DFVA M RL V VVDD
Sbjct 129 GPRTAYGRTKLAGELAIRAVLPDAHIVRTAWVYT-GSGTDFVATMLRLEKEKDTVSVVDD 187
Query 187 QTGSPTYVADLAEALLALADAGVR-GRVLHAANEGVVSRFGQARAVFEECGADPQRVRPV 245
Q GSPTY DLA LL LA G R G LHA N G + F ARAVF GADP+RVRP
Sbjct 188 QVGSPTYAVDLAAGLLELARVGGRPGATLHATNAGSATWFDLARAVFAGVGADPERVRPC 247
Query 246 SSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALA 287
+SA+F RPAPR +YS LS R W AGLTPLR WR ALA ALA
Sbjct 248 TSAEFVRPAPRPAYSVLSPRAWEAAGLTPLRPWRDALADALA 289
>gi|262201794|ref|YP_003273002.1| dTDP-4-dehydrorhamnose reductase [Gordonia bronchialis DSM 43247]
gi|262085141|gb|ACY21109.1| dTDP-4-dehydrorhamnose reductase [Gordonia bronchialis DSM 43247]
Length=319
Score = 275 bits (703), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 169/302 (56%), Positives = 191/302 (64%), Gaps = 18/302 (5%)
Query 5 SERLVITGAGGQLGSHLTAQ--AAREGRDMLALTSSQWDITDPA---AAERIIRHGDVVI 59
S + I GA GQLG+ L A+ A G D+ ALTS+ DI D A AA + GDVVI
Sbjct 9 SATVYIVGAAGQLGTALRARRPADFPGHDIRALTSADLDIGDEASVRAALGDLAAGDVVI 68
Query 60 NCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAE--P 117
NCAAYTDVDGA+S+EA AY VNA GP HLARA GA LIHVSTDYVF G GG+E P
Sbjct 69 NCAAYTDVDGAQSDEAGAYRVNADGPAHLARATVAAGAWLIHVSTDYVFSGQVGGSETGP 128
Query 118 R----PYEPTD--ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGG-TGKDFVAV 170
R PYEP D E P VY SKLAGE++ L P VVRTAWVYTGG +DFV
Sbjct 129 RSPALPYEPDDVGEVIPATVYGASKLAGERSALDTDPRTTVVRTAWVYTGGPDSRDFVGT 188
Query 171 MRRLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAG----VRGRVLHAANEGVVSRFG 226
MRRL V VVDDQ GSPTY DLA+ L LA G V G VLH N G S +
Sbjct 189 MRRLEQTRETVSVVDDQVGSPTYARDLADGLWELAATGPTEAVAGAVLHGTNAGRASWYE 248
Query 227 QARAVFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
ARAVF + GA P RV P ++A+FPRPAPR ++S LS WA AGL PLR WR+AL A+
Sbjct 249 VARAVFAQVGASPDRVHPCTTAEFPRPAPRPAFSVLSGASWAAAGLRPLREWRAALDEAI 308
Query 287 AA 288
A
Sbjct 309 GA 310
>gi|229489527|ref|ZP_04383390.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus erythropolis SK121]
gi|229323624|gb|EEN89382.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus erythropolis SK121]
Length=279
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/282 (55%), Positives = 185/282 (66%), Gaps = 6/282 (2%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTD 66
+++TGA GQLG+ + A A G + A+ S + DITD A + + G V+INCAAYT
Sbjct 3 NILLTGARGQLGTRIDALATSAGHTVTAVGSRELDITDSRAVDDFVSPGSVLINCAAYTA 62
Query 67 VDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDET 126
VD AE+++ A AVN GP++LA+ACARVG+RLIHVSTDYVF GD PY+ T
Sbjct 63 VDAAETDQEAARAVNEIGPRNLAQACARVGSRLIHVSTDYVFPGD----ASSPYDVDAPT 118
Query 127 APQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDD 186
P VY R+KL GE AV + +AAVVRTAWVY+ G G DFVA MRRL A V+VVDD
Sbjct 119 GPATVYGRTKLDGEIAVRESGADAAVVRTAWVYS-GVGTDFVATMRRLEAEREFVNVVDD 177
Query 187 QTGSPTYVADLAEALLALADAGVRG-RVLHAANEGVVSRFGQARAVFEECGADPQRVRPV 245
Q GSPTY DLA ++ LA G H N G S + ARAVFEE GADP RVRP
Sbjct 178 QIGSPTYSVDLAGGIVELALLDFTGASTFHVTNGGQASWYELARAVFEEIGADPARVRPC 237
Query 246 SSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALA 287
SSA+F RPAPR +YS LS R W AG+TPLR WR AL ALA
Sbjct 238 SSAEFVRPAPRPAYSVLSERAWVTAGMTPLRPWREALHAALA 279
>gi|226305634|ref|YP_002765594.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Rhodococcus erythropolis
PR4]
gi|226184751|dbj|BAH32855.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Rhodococcus erythropolis
PR4]
Length=279
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/281 (55%), Positives = 180/281 (65%), Gaps = 6/281 (2%)
Query 8 LVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTDV 67
+++TGA GQLG+ + A A G + A+ S + DITD A + + V+INCAAYT V
Sbjct 4 ILLTGARGQLGTRIDALATSAGHTVTAVGSRELDITDSRAVDDFVSPDSVLINCAAYTAV 63
Query 68 DGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETA 127
D AE+++ A AVN GP +LARACAR G+RLIHVSTDYVF GD PY+ T
Sbjct 64 DAAETDQEAARAVNEIGPLNLARACARAGSRLIHVSTDYVFPGD----ASTPYDVDAPTG 119
Query 128 PQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDDQ 187
P VY R+KL GE AV + + AVVRTAWVY+ G G DFVA MRRL A V+VVDDQ
Sbjct 120 PATVYGRTKLDGEIAVRESGADVAVVRTAWVYS-GVGTDFVATMRRLEAEREFVNVVDDQ 178
Query 188 TGSPTYVADLAEALLALADAGVRG-RVLHAANEGVVSRFGQARAVFEECGADPQRVRPVS 246
GSPTY DLA ++ LA G H N G S + ARAVFEE GADP RVRP S
Sbjct 179 IGSPTYSVDLAGGIVELALRDFTGASTFHLTNGGQASWYELARAVFEEIGADPARVRPCS 238
Query 247 SAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALA 287
SA F RPAPR +YS LS R W AG+TPLR WR AL ALA
Sbjct 239 SADFVRPAPRPAYSVLSERAWVTAGMTPLRPWREALHAALA 279
>gi|226365778|ref|YP_002783561.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Rhodococcus opacus
B4]
gi|226244268|dbj|BAH54616.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Rhodococcus opacus
B4]
Length=282
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/273 (60%), Positives = 183/273 (68%), Gaps = 6/273 (2%)
Query 8 LVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTDV 67
+++TGA GQL HL +A G + S + DITD A + + G VVINCAAYT V
Sbjct 4 ILVTGARGQLAGHLLRRAGAMGMPARGVGSDELDITDRDAVDAQVEAGSVVINCAAYTAV 63
Query 68 DGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETA 127
D AES+E A AVN GP +LA ACARVGARLIHVSTDYVF GD PYE T
Sbjct 64 DAAESDEDAARAVNEDGPANLAAACARVGARLIHVSTDYVFAGD----GDTPYEVDAPTG 119
Query 128 PQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDDQ 187
P Y R+KLAGE+AV AA P A VVRTAWVY+ G G DFV+ MRRL VDVVDDQ
Sbjct 120 PATAYGRTKLAGERAVHAALPSAHVVRTAWVYS-GVGSDFVSTMRRLERERDTVDVVDDQ 178
Query 188 TGSPTYVADLAEALLALAD-AGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVS 246
GSPT+ DLA+ALL LA + + VLHA N G S F ARAVFEE GADPQRVRP +
Sbjct 179 VGSPTFAGDLADALLELAGRSDIGAPVLHATNSGRASWFDLARAVFEEAGADPQRVRPCT 238
Query 247 SAQFPRPAPRSSYSALSSRQWALAGLTPLRHWR 279
SAQF RPAPR ++S LS R WA AGLTPLR WR
Sbjct 239 SAQFVRPAPRPAFSVLSGRAWADAGLTPLRPWR 271
>gi|333921472|ref|YP_004495053.1| dTDP-4-dehydrorhamnose reductase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483693|gb|AEF42253.1| dTDP-4-dehydrorhamnose reductase [Amycolicicoccus subflavus DQS3-9A1]
Length=287
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/285 (51%), Positives = 179/285 (63%), Gaps = 9/285 (3%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRH--GDVVINCAAY 64
R+++TGA GQ+G + + A G +++ ++S++ DIT ++ + +VVINCAAY
Sbjct 2 RILVTGARGQVGQQIVRRGAATGLEVVGMSSTELDITVESSVHSALTEVRPNVVINCAAY 61
Query 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124
T VD AE + A VN G +++A AC A LIHVSTDYVF GD PYE
Sbjct 62 TAVDKAELDFQRAADVNGRGARNIATACHTTEAHLIHVSTDYVFGGDAS----EPYEIDA 117
Query 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184
P+ VY R+KL GE AV A P A +VRTAWV+TG TG DFVA M RL + +DVV
Sbjct 118 PKNPKTVYGRTKLDGEGAVRAVAPSAQIVRTAWVFTG-TGSDFVATMHRLESERQFIDVV 176
Query 185 DDQTGSPTYVADLAEALLALADAGVRGRV--LHAANEGVVSRFGQARAVFEECGADPQRV 242
DDQ GSPTY ADLA+ LL LA V LHAAN G + + ARAVFEE GADP R+
Sbjct 177 DDQVGSPTYAADLADGLLRLASTAQSRTVTTLHAANSGTATWYQLARAVFEEIGADPDRI 236
Query 243 RPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALA 287
RP ++ +FPRPAPR YS LS R W AGL PLR WR AL ALA
Sbjct 237 RPCTTEEFPRPAPRPRYSVLSDRAWRAAGLEPLRPWRDALHAALA 281
>gi|258654332|ref|YP_003203488.1| dTDP-4-dehydrorhamnose reductase [Nakamurella multipartita DSM
44233]
gi|258557557|gb|ACV80499.1| dTDP-4-dehydrorhamnose reductase [Nakamurella multipartita DSM
44233]
Length=302
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 166/296 (57%), Positives = 189/296 (64%), Gaps = 15/296 (5%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERII----RHGD------ 56
RL++TGA GQLG+ + A A G A S + DITD A + R D
Sbjct 8 RLLVTGARGQLGTEVVAAATAAGLTYAAHGSRELDITDVDAVTATVADFGRAADEAGQSA 67
Query 57 VVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAE 116
V+IN AAYT VD AES+ AYAVNATGPQ+LARACA G RLIHVSTDYVF GD
Sbjct 68 VLINAAAYTAVDAAESDRDAAYAVNATGPQNLARACAACGVRLIHVSTDYVFPGD----G 123
Query 117 PRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAA 176
RPYE D T P+ VY SKLAGEQAVLA+ A VVRTAWV+ G TG +FV M LAA
Sbjct 124 RRPYEIDDPTGPRSVYGASKLAGEQAVLASLAGAQVVRTAWVW-GTTGANFVKTMAALAA 182
Query 177 GHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECG 236
VDVVDDQ GSPTY ADLA LL LA + V G VLHA N G + + ARA+F E G
Sbjct 183 SRPTVDVVDDQRGSPTYAADLAAGLLELAGSDVPGGVLHATNAGETTWYEFARAIFAELG 242
Query 237 ADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANS 292
DP RV P +S +F RPAPR +YS LS WA AGL PLR WR ALA A+A A++
Sbjct 243 EDPGRVHPTTSDKFLRPAPRPAYSVLSGAAWAAAGLNPLRPWRVALADAMARSADA 298
>gi|117927625|ref|YP_872176.1| dTDP-4-dehydrorhamnose reductase [Acidothermus cellulolyticus
11B]
gi|117648088|gb|ABK52190.1| dTDP-4-dehydrorhamnose reductase [Acidothermus cellulolyticus
11B]
Length=293
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/285 (55%), Positives = 184/285 (65%), Gaps = 11/285 (3%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDP----AAAERIIRHGDVVINCA 62
R ++TGAGGQLGS L R G +++ L ++ DITD AA ER H DVVIN A
Sbjct 3 RWLVTGAGGQLGSDLVDLLQRSGAEVVGLARAELDITDADAVLAACERF--HPDVVINAA 60
Query 63 AYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEP 122
AYT VD AES+ A A+AVNA G H+A A A++GARL+HVSTDYVF GD PY+
Sbjct 61 AYTAVDAAESDPATAFAVNAEGAGHVAAATAKLGARLVHVSTDYVFAGD----ATSPYDE 116
Query 123 TDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVD 182
AP+ VY RSK AGE+AVL A P A VVRTAWVY G G++FV M RL V
Sbjct 117 EAPVAPRSVYGRSKAAGERAVLEAHPGAYVVRTAWVY-GAVGQNFVKTMARLEREKETVT 175
Query 183 VVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRV 242
VVDDQ GSPT+ DLA+AL+ LA + V H N G + FG ARA+FEE GADP RV
Sbjct 176 VVDDQRGSPTWSRDLADALITLARSDAPPGVYHCTNAGETTWFGFARAIFEELGADPTRV 235
Query 243 RPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALA 287
RP ++A FPRPAPR +YS L R+W AGL +R WR AL A A
Sbjct 236 RPTTTAAFPRPAPRPAYSVLGHRRWQQAGLPAMRPWRDALRAAFA 280
>gi|296395056|ref|YP_003659940.1| dTDP-4-dehydrorhamnose reductase [Segniliparus rotundus DSM 44985]
gi|296182203|gb|ADG99109.1| dTDP-4-dehydrorhamnose reductase [Segniliparus rotundus DSM 44985]
Length=294
Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 147/291 (51%), Positives = 172/291 (60%), Gaps = 5/291 (1%)
Query 1 MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVIN 60
M R ERLV+TGAGGQ+GS + AA +++ L+ +Q DI D A +R GDVV+N
Sbjct 1 MNARVERLVVTGAGGQVGSRVVQIAAEHRYNVVGLSRAQLDICDEGAVAETLRPGDVVVN 60
Query 61 CAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVF----DGDFGGAE 116
CAA T VD AE++ A+ +NA +LARACARVGAR IHVSTDYVF +G F
Sbjct 61 CAAQTQVDAAEADPEGAHRINAEAVGNLARACARVGARFIHVSTDYVFAGQEEGWFSARL 120
Query 117 PRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGT-GKDFVAVMRRLA 175
RPYE DE P VY SKLAGE+ P + VVRT+WVYTG G+DFV+ R A
Sbjct 121 ARPYEADDEPRPIQVYGESKLAGERLAFQHNPRSVVVRTSWVYTGERHGRDFVSTAREQA 180
Query 176 AGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEEC 235
+ V DQ GSPT DLA LL LA G G +L +N G SR ARAVFEE
Sbjct 181 ESGSAMRAVTDQVGSPTRCVDLAYGLLELAWQGGEGGLLQFSNTGGCSRHDLARAVFEEL 240
Query 236 GADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
GADP VRP S + RPA R YS LS W GL P R WR AL AL
Sbjct 241 GADPDLVRPCMSWELERPAARPPYSVLSVASWMQRGLRPPRAWRDALRDAL 291
>gi|343928006|ref|ZP_08767471.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Gordonia alkanivorans
NBRC 16433]
gi|343762014|dbj|GAA14397.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Gordonia alkanivorans
NBRC 16433]
Length=311
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/292 (55%), Positives = 187/292 (65%), Gaps = 12/292 (4%)
Query 8 LVITGAGGQLGSHLTAQAAREGRDMLA--LTSSQWDITDP---AAAERIIRHGDVVINCA 62
+ I GAGGQLG+ L ++A+ ++ LTS+ DI D AAA + DVV+NCA
Sbjct 13 VYIVGAGGQLGTALQGRSAQAPDSVVCRPLTSADIDIADETSVAAALGDLGPDDVVVNCA 72
Query 63 AYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAE-PRPYE 121
AYTDVDGAES+ A VNATGP LA A GA LIHVSTDYVF G ++ P YE
Sbjct 73 AYTDVDGAESDVDGARRVNATGPAVLAAHTAAAGAWLIHVSTDYVFPGAAPASDRPDGYE 132
Query 122 PTDETA-PQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGG-TGKDFVAVMRRLAAGHG 179
P D + P VY +KLAGE+AVL A P A VVRTAWVYTGG +DFV MRRL
Sbjct 133 PDDVSGEPATVYGATKLAGERAVLDADPRATVVRTAWVYTGGPESRDFVGTMRRLEQARE 192
Query 180 RVDVVDDQTGSPTYVADLAEALLALADAGVR----GRVLHAANEGVVSRFGQARAVFEEC 235
V VVDDQ GSPTY DLA+ L L AG R G VLHA N G + F A AVFEE
Sbjct 193 TVSVVDDQLGSPTYCIDLADGLWELVAAGPRAEVAGAVLHATNAGRATWFDVAAAVFEEV 252
Query 236 GADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALA 287
GA+ RV P ++A+FPRPAPR +YS LS R WA AGLTPLR WR+AL ++A
Sbjct 253 GAERSRVLPTTTAEFPRPAPRPAYSVLSGRSWAAAGLTPLRDWRAALHASIA 304
>gi|302556045|ref|ZP_07308387.1| dTDP-4-dehydrorhamnose reductase [Streptomyces viridochromogenes
DSM 40736]
gi|302473663|gb|EFL36756.1| dTDP-4-dehydrorhamnose reductase [Streptomyces viridochromogenes
DSM 40736]
Length=291
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 147/288 (52%), Positives = 178/288 (62%), Gaps = 15/288 (5%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERII--RHGDVVINCAAY 64
R ++TGAGG LG + + R G D++AL + DIT P +R + D+V+NCAAY
Sbjct 2 RWLVTGAGGMLGHDVARELTRRGEDVVALDRAALDITTPETVDRAVAGHRPDLVVNCAAY 61
Query 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124
T VD AE++EA A +N GP+ LARACA ARLIHVSTDYVF G+ A PY
Sbjct 62 TAVDDAETDEARALEINGEGPRLLARACAAHDARLIHVSTDYVFSGE---ARTDPYAEDH 118
Query 125 ETAPQGVYARSKLAGEQAVLAAFP-EAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDV 183
AP+ Y R+KLAGE+AVL P +AVVRTAW+Y G G +FV M L A VDV
Sbjct 119 RPAPRTAYGRTKLAGERAVLEELPGRSAVVRTAWLY-GVHGANFVRTMIGLEARRDTVDV 177
Query 184 VDDQTGSPTYVADLAEALLALADAGVR-----GRVLHAANEGVVSRFGQARAVFEECGAD 238
VDDQ G PT+ AD+AE + AD GVR V HA N G + + AR VF GAD
Sbjct 178 VDDQRGQPTWSADVAERI---ADLGVRLGPGAHGVFHATNSGEATWYELAREVFSLVGAD 234
Query 239 PQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
P RVRP +SA FPRPAPR +YS L+ R+W GL P R WRSAL AL
Sbjct 235 PDRVRPTTSAAFPRPAPRPAYSVLAHRRWQRIGLPPARDWRSALHEAL 282
>gi|86739428|ref|YP_479828.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. CcI3]
gi|86566290|gb|ABD10099.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. CcI3]
Length=298
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/286 (52%), Positives = 176/286 (62%), Gaps = 22/286 (7%)
Query 10 ITGAGGQLGSHLT----AQAAREGRDM---LALTSSQWDITDPAAAERIIRH-------- 54
+TGA GQLG+ L A+AA G + LT +++DITDPA ++R
Sbjct 1 MTGAAGQLGADLCRLLEARAAEPGSPVSGWAGLTRAEFDITDPARVRAVLRDQARPAKIQ 60
Query 55 -GDVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFG 113
G VV N AA+T+VD AES+EA AYAVNATGP HLA ACA VGA LIH+STDYVFDG
Sbjct 61 GGLVVFNTAAWTNVDAAESDEAGAYAVNATGPAHLAAACAEVGATLIHISTDYVFDGRAA 120
Query 114 GAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAA-VVRTAWVYTGGTGKDFVAVMR 172
+PYE D T P Y R+KLAGE+AV A P+A+ VVRTAWVY G TG +FV +
Sbjct 121 ----KPYEVNDPTGPVSAYGRTKLAGEEAVRALLPDASYVVRTAWVY-GRTGSNFVKTIS 175
Query 173 RLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVF 232
RLA + VVDDQ GSPT+ ADLA LL LA + V H N G + FG AR +
Sbjct 176 RLARERDTLSVVDDQVGSPTWSADLASGLLELASSTAPTGVYHCTNAGETTWFGFAREIV 235
Query 233 EECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHW 278
G DP +V P ++ FPRPA R +Y+ LS R W AGLTP R W
Sbjct 236 AALGQDPAKVTPTTTEAFPRPARRPAYAVLSGRSWVDAGLTPPRAW 281
>gi|312199899|ref|YP_004019960.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EuI1c]
gi|311231235|gb|ADP84090.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EuI1c]
Length=292
Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 150/290 (52%), Positives = 183/290 (64%), Gaps = 16/290 (5%)
Query 10 ITGAGGQLGSHLTAQAAREGR--DMLALTSSQWDITDPAAAERIIRH---------GDVV 58
+ G+GGQ+GS L A + R + LT S+ DITDPA +IR G V
Sbjct 1 MIGSGGQVGSELCRLLALDPRLPAIAGLTRSECDITDPARLRAVIRDQARPAKVQGGLTV 60
Query 59 INCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPR 118
+N AA+TDVDGAE++E AYAVNATGP HLA ACA GA LIH+STDYVFDG +
Sbjct 61 VNTAAWTDVDGAETDEVGAYAVNATGPAHLAAACAEAGATLIHLSTDYVFDG----LADK 116
Query 119 PYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGH 178
PYE D+T+P Y R+KLAGEQAVLA P + VVRTAWVY G GK+FV M RLA
Sbjct 117 PYEVDDQTSPASAYGRTKLAGEQAVLALCPSSYVVRTAWVY-GAVGKNFVKTMARLARER 175
Query 179 GRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGAD 238
+ VVDDQ GSPT+ ADLA L+ L +G + H N G + A+A+ EE G D
Sbjct 176 DTLTVVDDQRGSPTWSADLATGLIELILSGASFGLYHFTNAGDTTWHSFAQAIMEEIGED 235
Query 239 PQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAA 288
P +V P ++A FPRPAPR ++S LS+R W AGLT R WR AL+ A AA
Sbjct 236 PAKVLPTTTAAFPRPAPRPAFSVLSNRSWLDAGLTAPRPWRDALSAAFAA 285
>gi|256380334|ref|YP_003103994.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827]
gi|255924637|gb|ACU40148.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827]
Length=296
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 149/294 (51%), Positives = 176/294 (60%), Gaps = 24/294 (8%)
Query 8 LVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDP-AAAERIIRHG---------DV 57
L++ G GQLG L A R + AL+S++ DITD A A+R+ V
Sbjct 6 LLVPGGRGQLGQDLLATGGR----VRALSSAELDITDADAVADRVSEFAAWARAEGLAPV 61
Query 58 VINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEP 117
V+N AAYT VD AE++E A AVNA GP+ LA AC L+HVSTDYVF GD
Sbjct 62 VVNAAAYTAVDDAETDEDRALAVNALGPELLALACREHDVPLLHVSTDYVFPGDATA--- 118
Query 118 RPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAG 177
PYEP D T P+ Y R+KLAGE+ LAA+ VVRTAWVY G G +FV M RLA
Sbjct 119 -PYEPDDVTGPRSAYGRTKLAGERRALAAWDRTWVVRTAWVYGAG-GPNFVKTMARLAGQ 176
Query 178 HGRVDVVDDQTGSPTYVADLAEALLALADAGVRG-----RVLHAANEGVVSRFGQARAVF 232
+ VVDDQ GSPT+ ADLA L+ LA A RVLHA G + FG ARAVF
Sbjct 177 RESLSVVDDQRGSPTWSADLAAGLVELAAATTGPAAPAQRVLHATGGGETTWFGLARAVF 236
Query 233 EECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
EE G DP+RVRP + FPRPAPR +YS LS + W AGLTPLR WR AL A+
Sbjct 237 EELGLDPERVRPCGTEDFPRPAPRPAYSVLSPKAWESAGLTPLRPWREALTAAV 290
>gi|296138790|ref|YP_003646033.1| dTDP-4-dehydrorhamnose reductase [Tsukamurella paurometabola
DSM 20162]
gi|296026924|gb|ADG77694.1| dTDP-4-dehydrorhamnose reductase [Tsukamurella paurometabola
DSM 20162]
Length=321
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 151/298 (51%), Positives = 171/298 (58%), Gaps = 23/298 (7%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGD-VVINCAAYT 65
+VITGA GQLGS L A AA G + LT + D+T A + D ++INC A+T
Sbjct 19 NIVITGAAGQLGSALVAAAADRGLAVRGLTRADLDVTSSQAVAALDLDVDTLLINCVAHT 78
Query 66 DVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEP---RPYEP 122
VD AES A +N P LAR CA+ GARL+H+STDYVF G P P+EP
Sbjct 79 AVDAAESEPDAAALLNERVPGRLARRCAQTGARLVHISTDYVF-----GPAPTPAHPWEP 133
Query 123 TDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTG---------KDFVAVMRR 173
D T P VY R+KL GE+A AA P VVRTAWVYTG T DFV M R
Sbjct 134 GDPTGPASVYGRTKLDGERAARAADPRTVVVRTAWVYTGRTAGPDGHTAWAPDFVGTMGR 193
Query 174 LAAGHGRVDVVDDQTGSPTYVADLAEALLALAD-----AGVRGRVLHAANEGVVSRFGQA 228
LA VV DQTGSPTY DLA LL LAD G G VLHAA G + F A
Sbjct 194 LADQGADPAVVADQTGSPTYAPDLAAGLLDLADLFSAEPGRPGTVLHAAGGGTATWFDVA 253
Query 229 RAVFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
R VF GADP+RV P ++A FPRPAPR +YS LS WA AGLTPL WR AL AL
Sbjct 254 RGVFARTGADPERVTPCTTADFPRPAPRPAYSVLSPVAWAAAGLTPLPDWRDALDRAL 311
>gi|84498709|ref|ZP_00997450.1| dTDP-4-dehydrorhamnose reductase [Janibacter sp. HTCC2649]
gi|84498714|ref|ZP_00997455.1| dTDP-4-dehydrorhamnose reductase [Janibacter sp. HTCC2649]
gi|84381009|gb|EAP96897.1| dTDP-4-dehydrorhamnose reductase [Janibacter sp. HTCC2649]
gi|84381014|gb|EAP96902.1| dTDP-4-dehydrorhamnose reductase [Janibacter sp. HTCC2649]
Length=284
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/276 (50%), Positives = 167/276 (61%), Gaps = 5/276 (1%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTD 66
R ++TGAGG L L + G D+ LT + DITD +A + DVV N AA+T
Sbjct 3 RWLVTGAGGMLAHDLLPRLTDAGHDVTPLTRTDLDITDASACRAAVEGHDVVANLAAWTA 62
Query 67 VDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDET 126
VD AES+E A+AVNA G ++A AC R ARL+HVSTDYVF GD PY
Sbjct 63 VDDAESHEGAAFAVNALGAANVAAACERSSARLVHVSTDYVFSGDTS----TPYAVNAPV 118
Query 127 APQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDD 186
AP+ Y R+K AGE AVLA P A VVRTAW+Y G G +FVA + RLA + VVDD
Sbjct 119 APRSAYGRTKAAGEWAVLAHCPTALVVRTAWLYGAG-GPNFVATISRLATERDTIAVVDD 177
Query 187 QTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVS 246
Q G PT+ ADLAEA+ L +A +G V H G + F ARA+FEE G DP+RV P +
Sbjct 178 QHGQPTWTADLAEAIPRLVEADAQGGVWHGTGSGQTTWFDFARAIFEELGLDPERVTPTT 237
Query 247 SAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSAL 282
+A FPRPAPR ++S L +W GL PL HWR L
Sbjct 238 TASFPRPAPRPTFSVLDDAKWRTHGLDPLPHWRDGL 273
>gi|111023268|ref|YP_706240.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus jostii RHA1]
gi|110822798|gb|ABG98082.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus jostii RHA1]
Length=262
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/281 (55%), Positives = 173/281 (62%), Gaps = 26/281 (9%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTD 66
++++TGA GQLG HL +A G + S++ DITDP A + G VVINCAAYT
Sbjct 3 KILVTGARGQLGGHLLRRAEATGIPARGVGSAELDITDPGAVNEQVEPGSVVINCAAYTA 62
Query 67 VDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDET 126
VD AES+E A RLIHVSTDYVF G PYE T
Sbjct 63 VDAAESDEDTA--------------------RLIHVSTDYVF----AGQGDTPYEVDAPT 98
Query 127 APQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDD 186
P Y R+KLAGE+AV AA P A VVRTAWVYTG G DFV+ M RL VDVVDD
Sbjct 99 GPATAYGRTKLAGERAVHAALPSAHVVRTAWVYTG-VGSDFVSTMLRLERERDTVDVVDD 157
Query 187 QTGSPTYVADLAEALLALAD-AGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPV 245
Q GSPT+ DLA+ALL LA + V VLHA N G S F ARAVFEE GADP+RVRP
Sbjct 158 QVGSPTFAGDLADALLELAGRSDVDAPVLHATNSGRASWFDLARAVFEEAGADPERVRPC 217
Query 246 SSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
+SAQF RPAPR ++S LS R WA AGLTPLR WR AL A+
Sbjct 218 TSAQFVRPAPRPAFSVLSGRAWADAGLTPLRPWRDALHAAV 258
>gi|297718754|gb|ADI50278.1| 4-ketoreductase [Streptomyces sp. MK730-62F2]
Length=295
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/288 (51%), Positives = 175/288 (61%), Gaps = 15/288 (5%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHG--DVVINCAAY 64
R +ITGA G LG + + R G ++ L + DIT P A + +R DVV+NCAAY
Sbjct 2 RWLITGASGMLGRDVVEELTRRGERVVGLDRAALDITSPPAVDSAVREHRPDVVVNCAAY 61
Query 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124
T VD AE++EA A +N GP+ LARACA ARLIHVSTDYVF G+ A PY
Sbjct 62 TAVDDAETDEARALEINGAGPRLLARACAAHEARLIHVSTDYVFSGE---ARTTPYPEDH 118
Query 125 ETAPQGVYARSKLAGEQAVLAAFPEA-AVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDV 183
T P+ Y R+KLAGEQAVL P A AV+RTAW+Y G G +FV M L A +DV
Sbjct 119 RTGPRTAYGRTKLAGEQAVLEELPGASAVLRTAWLY-GVHGSNFVRTMIGLEARRDTLDV 177
Query 184 VDDQTGSPTYVADLAEALLALADAGVR-----GRVLHAANEGVVSRFGQARAVFEECGAD 238
VDDQ G PT+ AD+A+ + A+ G R V HA N G + + AR VF GAD
Sbjct 178 VDDQRGQPTWSADVAQRI---AELGPRLGPEAHGVFHATNSGEATWYDLAREVFSLIGAD 234
Query 239 PQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
P RVRP SSA FPRPAPR +YSAL+ R+W GL R WRSAL AL
Sbjct 235 PDRVRPTSSAAFPRPAPRPAYSALAHRRWQEIGLPLPRDWRSALHEAL 282
>gi|317508993|ref|ZP_07966625.1| RmlD substrate binding domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
gi|316252703|gb|EFV12141.1| RmlD substrate binding domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
Length=286
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/283 (50%), Positives = 165/283 (59%), Gaps = 5/283 (1%)
Query 9 VITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTDVD 68
+ITGAGGQ+GS L A+ ++LAL +Q DI D A +R GDVV+NCAA T VD
Sbjct 1 MITGAGGQVGSRLAQVASEHEYNVLALARTQLDICDEDAVAETLRPGDVVVNCAAETSVD 60
Query 69 GAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVF----DGDFGGAEPRPYEPTD 124
AES+ A A+ +NA +LA AC R+GAR IHVSTDYVF +G F RPYE D
Sbjct 61 TAESDSARAHQINAEAVGNLAAACDRIGARFIHVSTDYVFAGQEEGWFSVRLARPYETDD 120
Query 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGG-TGKDFVAVMRRLAAGHGRVDV 183
E P VY SKLAGE+ P + VVRT+WV++G G DFV+ R A G +
Sbjct 121 EPRPIQVYGESKLAGERLAFERNPRSVVVRTSWVFSGERNGIDFVSTAREQAESGGVMRA 180
Query 184 VDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVR 243
V DQ GSPT+ DL L+ L G G +L N G SR+ ARAVFEE GADP VR
Sbjct 181 VTDQVGSPTHSLDLVYGLMELVWRGDEGALLQFCNTGGCSRYDLARAVFEELGADPGLVR 240
Query 244 PVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
P S + RPA R YS LS W GL P R WR AL AL
Sbjct 241 PCMSWELSRPASRPPYSVLSVASWVQRGLRPPRAWRDALRYAL 283
>gi|291439684|ref|ZP_06579074.1| dTDP-4-dehydrorhamnose reductase [Streptomyces ghanaensis ATCC
14672]
gi|291342579|gb|EFE69535.1| dTDP-4-dehydrorhamnose reductase [Streptomyces ghanaensis ATCC
14672]
Length=307
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/285 (49%), Positives = 171/285 (60%), Gaps = 12/285 (4%)
Query 9 VITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGD--VVINCAAYTD 66
++TGAGG LG + A+ A G AL + D+TD A R +++ VV+NCAA+T
Sbjct 15 LVTGAGGMLGQDVLARLAAAGERTTALDRAALDLTDADAVRRALQNHRPAVVVNCAAWTA 74
Query 67 VDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDET 126
VD AE+ EA A A+N GP HLA ACAR GA L+HVSTDYVF GD PY T
Sbjct 75 VDDAETREAEALAINGDGPAHLADACARTGAVLLHVSTDYVFAGDATA----PYAEDAPT 130
Query 127 APQGVYARSKLAGEQAVLAAFPE-AAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVD 185
AP+ Y R+KLAGEQAVL+ P+ VVRTAW+Y G G +FV M RL +DVVD
Sbjct 131 APRSAYGRTKLAGEQAVLSTLPDRGYVVRTAWLY-GAGGPNFVRTMIRLEGQRETLDVVD 189
Query 186 DQTGSPTYVADLAEALLALADAGVRGR----VLHAANEGVVSRFGQARAVFEECGADPQR 241
DQ G PT+ ADLA LL L A + G V H + G + +G R +F GADP R
Sbjct 190 DQRGQPTWSADLAGLLLVLGRAALAGTAPAGVYHGTSSGETTWYGFTREIFRLLGADPDR 249
Query 242 VRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
VRP +S F RPAPR +YS L ++A AG+ PLR WR AL A
Sbjct 250 VRPTTSEAFVRPAPRPAYSVLGHERFAAAGIEPLRDWREALTEAF 294
>gi|111220689|ref|YP_711483.1| dTDP-4-dehydrorhamnose reductase [Frankia alni ACN14a]
gi|111148221|emb|CAJ59891.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase)
(dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose
synthetase) [Frankia alni ACN14a]
Length=302
Score = 231 bits (590), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 149/298 (50%), Positives = 181/298 (61%), Gaps = 22/298 (7%)
Query 7 RLVITGAGGQLGSHL-------TAQAAREGRDMLALTSSQWDITDPAAAERIIRH----- 54
R+++TGA GQLG+ L TA+ R L ++ DITDPA ++R
Sbjct 2 RVLVTGAAGQLGADLCRLLEARTAEPDSPVRAWAGLGRAELDITDPARVRAVLRDQARPA 61
Query 55 ----GDVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDG 110
G VVIN AA+TDVDGAE++EA AYAVNATGP HLA CA + A L+ +STDYVFDG
Sbjct 62 KIQGGLVVINTAAWTDVDGAEADEAGAYAVNATGPAHLAATCAELDATLVQLSTDYVFDG 121
Query 111 DFGGAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAA-VVRTAWVYTGGTGKDFVA 169
+PYE DET P G Y R+KLAGE+AV A P ++ VVRTAWVY G TG++FV
Sbjct 122 R----ATKPYETGDETDPAGAYGRTKLAGEEAVRALLPASSYVVRTAWVY-GATGRNFVK 176
Query 170 VMRRLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQAR 229
+ RLA G V VV DQTGSPT+ ADLA LL L + V H N G + +G AR
Sbjct 177 TISRLARERGAVSVVADQTGSPTWSADLAAGLLDLVASPAPPGVYHCTNTGETTWYGFAR 236
Query 230 AVFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALA 287
+ E G DP V ++ FPR A R +YS LS+R WA AGLTPLR W AL A A
Sbjct 237 RIMTEIGLDPATVSATTTDAFPRAAARPAYSVLSTRSWADAGLTPLRPWHRALQDAFA 294
>gi|257054676|ref|YP_003132508.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora viridis DSM
43017]
gi|256584548|gb|ACU95681.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora viridis DSM
43017]
Length=313
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/297 (50%), Positives = 174/297 (59%), Gaps = 22/297 (7%)
Query 8 LVITGAGGQLGSHLTAQAAREGR--DMLALTSSQWDITDPAAAERIIR----------HG 55
+++ G GQLG L A AA G D++A S++ D+T+P A +
Sbjct 14 VLVPGGRGQLGRDLVAAAAALGDRIDVIAPGSAELDVTEPGAVVEAVTDLATGAAQSGRR 73
Query 56 DVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGA 115
VVIN AAYT VD AE +E A++VNA GP+ LA C+ G L+HVSTDYVF G
Sbjct 74 AVVINAAAYTAVDAAEEDEGTAFSVNADGPRMLAAVCSSRGVPLVHVSTDYVFSG----T 129
Query 116 EPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLA 175
RPYEP D P+ Y R+K AGE AVL + A VVRTAW+Y G G +FV M L
Sbjct 130 ADRPYEPEDALGPRSAYGRTKAAGENAVLGSGARAWVVRTAWLYGAG-GNNFVRTMMELE 188
Query 176 AGHGRVDVVDDQTGSPTYVADLAEALLALADA-----GVRGRVLHAANEGVVSRFGQARA 230
+ V VVDDQ GSPT ADLA LL LAD G R +VLH N G + FG ARA
Sbjct 189 SRRDTVSVVDDQCGSPTSSADLARGLLELADRITSGRGPRRKVLHCTNSGQTTWFGLARA 248
Query 231 VFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALA 287
VFEE GADP RVRP S+ FPRPAPR YS LS+ W +GLTPLR WR AL A
Sbjct 249 VFEELGADPGRVRPCSTEDFPRPAPRPPYSVLSNAAWLESGLTPLRPWREALTAFFA 305
>gi|271962203|ref|YP_003336399.1| dTDP-4-dehydrorhamnose reductase [Streptosporangium roseum DSM
43021]
gi|270505378|gb|ACZ83656.1| dTDP-4-dehydrorhamnose reductase [Streptosporangium roseum DSM
43021]
Length=285
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 131/279 (47%), Positives = 163/279 (59%), Gaps = 8/279 (2%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIR--HGDVVINCAAY 64
R +ITGA G L + L + G +LAL + D+ D A ++ D V+NCAA+
Sbjct 3 RWLITGASGMLATELLGRLQAAGESVLALRRDELDLRDGPAVRHLVSACRPDTVVNCAAW 62
Query 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124
T VD AE+ EA A AVN G + LA AC R+GAR+I STDYVFDG PY
Sbjct 63 TAVDDAETREAEALAVNGHGVRALAEACERLGARMIQPSTDYVFDG----TALDPYREDA 118
Query 125 ETAPQGVYARSKLAGEQAVLAAFPEAA-VVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDV 183
T P Y R+KLAGE AVL PE VVRTAW+Y G TGK+FV M L ++V
Sbjct 119 RTCPVNAYGRTKLAGEHAVLEVLPETGYVVRTAWLY-GATGKNFVRTMAELERTRPSLEV 177
Query 184 VDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVR 243
VDDQ G PT+ DLA ++ L G V HA G S +G AR +F+ GADP R+
Sbjct 178 VDDQVGPPTWAGDLAAGIIELGRTGPPPGVYHATGSGQTSWYGFAREIFKLVGADPDRIT 237
Query 244 PVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSAL 282
PVS+ +F RPAPR +YS L +W+LAGL P+R WR AL
Sbjct 238 PVSTKEFARPAPRPAYSVLGHERWSLAGLPPMRDWREAL 276
>gi|158056583|emb|CAP11383.1| 4-ketoreductase [Streptomyces olivaceus]
Length=293
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/285 (50%), Positives = 163/285 (58%), Gaps = 10/285 (3%)
Query 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYTD 66
R +ITGA G LG L A G + ALT + DITD AA + DVV+N AA+TD
Sbjct 3 RWLITGAAGMLGRDLAEVLAESGAEYTALTRKELDITDTAAVRAAVAGHDVVVNAAAWTD 62
Query 67 VDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDET 126
VDGAE+ EA A +N GP+ LA ACA GA LI VSTDYVF GD PY T
Sbjct 63 VDGAETEEAAATRINGEGPRALAAACAETGAVLIQVSTDYVFPGD----ATEPYRHDAPT 118
Query 127 APQGVYARSKLAGEQAVLAAFPE-AAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVD 185
AP Y RSKLAGE AV PE VVRTAW+Y G G++FV+ M LA VDVVD
Sbjct 119 APVNAYGRSKLAGELAVTELLPERGYVVRTAWLY-GAHGRNFVSTMLGLAEQRETVDVVD 177
Query 186 DQTGSPTYVADLAEALLALADAGVRGR----VLHAANEGVVSRFGQARAVFEECGADPQR 241
DQ G PT+ LA L L +A V G+ V H + F ARA FE G DP+R
Sbjct 178 DQRGQPTWTRALARQLRDLGEAAVAGKAPAGVYHGTAAETATWFDLARAAFELTGLDPER 237
Query 242 VRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATAL 286
VRP +S +F RPA R SYS L+ +WA AG+ HWR L AL
Sbjct 238 VRPTTSEKFVRPARRPSYSVLAHERWAEAGVAAQPHWREQLTEAL 282
>gi|256397292|ref|YP_003118856.1| dTDP-4-dehydrorhamnose reductase [Catenulispora acidiphila DSM
44928]
gi|256363518|gb|ACU77015.1| dTDP-4-dehydrorhamnose reductase [Catenulispora acidiphila DSM
44928]
Length=301
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/288 (50%), Positives = 169/288 (59%), Gaps = 8/288 (2%)
Query 7 RLVITGAGGQLGSHLTAQAARE-GRDMLALTSSQWDITDPAAAERIIRHGDVVINCAAYT 65
R ++TGAGG LG+ L A E + ALT ++ D+TD +A + D+V+N AA+T
Sbjct 16 RWLVTGAGGMLGTDLVALLKAEPAAQVTALTRAELDVTDASAVAAAVAGHDIVVNAAAWT 75
Query 66 DVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDE 125
DVDGAE++EA A AVN G LA ACA GARL+ VSTDYVFDG PY
Sbjct 76 DVDGAETHEAQATAVNGGGVSSLASACAATGARLLTVSTDYVFDGK----GEAPYGEYAA 131
Query 126 TAPQGVYARSKLAGEQAVLAAFPEAA-VVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184
T P Y RSKL GE+AVLA PE VVRTAW+Y G G +FV M RLA +DVV
Sbjct 132 TDPINAYGRSKLVGERAVLAVLPETGYVVRTAWLY-GAHGPNFVRTMLRLAGERETLDVV 190
Query 185 DDQTGSPTYVADLAEALLALADAG-VRGRVLHAANEGVVSRFGQARAVFEECGADPQRVR 243
DDQ G PT+ LA L+ALA A + H G S FG ARA FEE G DP+RVR
Sbjct 191 DDQIGQPTWTGALAGQLIALAQASQAPAGIYHGTASGQTSWFGLARAAFEEAGLDPERVR 250
Query 244 PVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPAN 291
P +S +F RPA R YS L +WA AGL L WR LA + A A
Sbjct 251 PTTSDKFVRPAERPKYSVLGHDRWAEAGLPELGDWRGMLAASGVATAG 298
>gi|326382032|ref|ZP_08203725.1| dTDP-4-dehydrorhamnose reductase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199458|gb|EGD56639.1| dTDP-4-dehydrorhamnose reductase [Gordonia neofelifaecis NRRL
B-59395]
Length=305
Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 153/298 (52%), Positives = 181/298 (61%), Gaps = 18/298 (6%)
Query 5 SERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERI---IRHGDVVINC 61
S+++ I GA GQ+G L A +R RD++ LTS DI + I GDVVIN
Sbjct 3 SQQVFIVGAAGQVGRALLA--SRPDRDVVPLTSDDIDIRSDDSVREALAGIAPGDVVINA 60
Query 62 AAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFD----GDFGGAEP 117
A YT VD AES+ A+AVNA GP +LA GARLIH+STDY + GD G P
Sbjct 61 AGYTAVDAAESDREAAWAVNADGPANLAAVTGASGARLIHLSTDYAYATTALGDDGA--P 118
Query 118 RPYEPTDETA-PQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGK-DFVAVMRRLA 175
RP+EP DET P VY SKL G++A A P VVRTAWV+TGG G DFVA M RL
Sbjct 119 RPFEPADETVEPATVYGASKLEGDRAAQRADPATVVVRTAWVFTGGRGDADFVATMVRLE 178
Query 176 AGHGRVDVVDDQTGSPTYVADLAEALLALAD-----AGVRGRVLHAANEGVVSRFGQARA 230
V VVDDQ GSPTY DLA+AL L D A G V+HA N G S + AR
Sbjct 179 TERDVVRVVDDQVGSPTYAPDLAKALWELVDRLDSPALAAGAVVHATNAGATSWWELART 238
Query 231 VFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAA 288
VF E GADP+RV+P ++ +FPRPAPR SYS LS WA AGL+PLR WR A+ +L A
Sbjct 239 VFAEVGADPERVQPCTTDEFPRPAPRPSYSVLSGASWAAAGLSPLRSWRDAVHDSLTA 296
Lambda K H
0.317 0.130 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 511987440690
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40