BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3269
Length=93
Score E
Sequences producing significant alignments: (Bits) Value
gi|15842859|ref|NP_337896.1| hypothetical protein MT3369 [Mycoba... 183 7e-45
gi|15610405|ref|NP_217786.1| hypothetical protein Rv3269 [Mycoba... 182 2e-44
gi|308232401|ref|ZP_07415935.2| hypothetical protein TMAG_02722 ... 172 1e-41
gi|240172498|ref|ZP_04751157.1| hypothetical protein MkanA1_2450... 154 4e-36
gi|342861473|ref|ZP_08718120.1| hypothetical protein MCOL_21411 ... 143 1e-32
gi|41409481|ref|NP_962317.1| hypothetical protein MAP3383 [Mycob... 142 1e-32
gi|118463473|ref|YP_883375.1| hypothetical protein MAV_4234 [Myc... 142 2e-32
gi|254821358|ref|ZP_05226359.1| hypothetical protein MintA_15582... 137 4e-31
gi|15827316|ref|NP_301579.1| hypothetical protein ML0748 [Mycoba... 135 1e-30
gi|296168935|ref|ZP_06850604.1| conserved hypothetical protein [... 125 1e-27
gi|333991660|ref|YP_004524274.1| hypothetical protein JDM601_302... 124 4e-27
gi|118618085|ref|YP_906417.1| hypothetical protein MUL_2615 [Myc... 124 6e-27
gi|118467605|ref|YP_890281.1| hypothetical protein MSMEG_6059 [M... 108 2e-22
gi|226359852|ref|YP_002777630.1| hypothetical protein ROP_04380 ... 99.0 2e-19
gi|340627004|ref|YP_004745456.1| hypothetical protein MCAN_20131... 97.1 9e-19
gi|183982159|ref|YP_001850450.1| hypothetical protein MMAR_2146 ... 93.6 9e-18
gi|296165061|ref|ZP_06847615.1| conserved hypothetical protein [... 91.7 4e-17
gi|340625980|ref|YP_004744432.1| hypothetical protein MCAN_09721... 90.9 6e-17
gi|15840394|ref|NP_335431.1| hypothetical protein MT0996 [Mycoba... 90.5 8e-17
gi|15608108|ref|NP_215483.1| hypothetical protein Rv0968 [Mycoba... 90.5 8e-17
gi|240171334|ref|ZP_04749993.1| hypothetical protein MkanA1_1862... 86.3 1e-15
gi|183982550|ref|YP_001850841.1| hypothetical protein MMAR_2537 ... 82.4 2e-14
gi|296164289|ref|ZP_06846875.1| conserved hypothetical protein [... 82.4 2e-14
gi|296164259|ref|ZP_06846848.1| conserved hypothetical protein [... 81.6 3e-14
gi|15609130|ref|NP_216509.1| hypothetical protein Rv1993c [Mycob... 78.6 3e-13
gi|167970478|ref|ZP_02552755.1| hypothetical protein MtubH3_2159... 78.2 3e-13
gi|183981452|ref|YP_001849743.1| hypothetical protein MMAR_1430 ... 78.2 4e-13
gi|289570093|ref|ZP_06450320.1| conserved hypothetical protein [... 77.4 7e-13
gi|325000600|ref|ZP_08121712.1| hypothetical protein PseP1_17612... 73.9 7e-12
gi|333919412|ref|YP_004492993.1| hypothetical protein AS9A_1744 ... 73.6 9e-12
gi|296164642|ref|ZP_06847208.1| conserved hypothetical protein [... 72.8 2e-11
gi|258653982|ref|YP_003203138.1| hypothetical protein Namu_3853 ... 64.3 5e-09
gi|296165052|ref|ZP_06847606.1| conserved hypothetical protein [... 61.2 4e-08
gi|183984843|ref|YP_001853134.1| hypothetical protein MMAR_4875 ... 48.1 5e-04
gi|152964259|ref|YP_001360043.1| hypothetical protein Krad_0289 ... 47.4 7e-04
gi|296164386|ref|ZP_06846962.1| conserved hypothetical protein [... 45.1 0.004
gi|118616275|ref|YP_904607.1| hypothetical protein MUL_0424 [Myc... 43.9 0.009
gi|289749496|ref|ZP_06508874.1| conserved hypothetical protein [... 37.7 0.62
>gi|15842859|ref|NP_337896.1| hypothetical protein MT3369 [Mycobacterium tuberculosis CDC1551]
gi|13883189|gb|AAK47710.1| hypothetical protein MT3369 [Mycobacterium tuberculosis CDC1551]
Length=145
Score = 183 bits (464), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES
Sbjct 53 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 112
Query 61 ARLKVADVMAEARERIGEESPTPAISDLHDHDH 93
ARLKVADVMAEARERIGEESPTPAISDLHDHDH
Sbjct 113 ARLKVADVMAEARERIGEESPTPAISDLHDHDH 145
>gi|15610405|ref|NP_217786.1| hypothetical protein Rv3269 [Mycobacterium tuberculosis H37Rv]
gi|31794449|ref|NP_856942.1| hypothetical protein Mb3297 [Mycobacterium bovis AF2122/97]
gi|121639158|ref|YP_979382.1| hypothetical protein BCG_3298 [Mycobacterium bovis BCG str. Pasteur
1173P2]
65 more sequence titles
Length=93
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES
Sbjct 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
Query 61 ARLKVADVMAEARERIGEESPTPAISDLHDHDH 93
ARLKVADVMAEARERIGEESPTPAISDLHDHDH
Sbjct 61 ARLKVADVMAEARERIGEESPTPAISDLHDHDH 93
>gi|308232401|ref|ZP_07415935.2| hypothetical protein TMAG_02722 [Mycobacterium tuberculosis SUMu001]
gi|308370210|ref|ZP_07420657.2| hypothetical protein TMBG_01964 [Mycobacterium tuberculosis SUMu002]
gi|308373690|ref|ZP_07433333.2| hypothetical protein TMEG_03666 [Mycobacterium tuberculosis SUMu005]
9 more sequence titles
Length=89
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/89 (99%), Positives = 89/89 (100%), Gaps = 0/89 (0%)
Query 5 VFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLK 64
+FLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLK
Sbjct 1 MFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLK 60
Query 65 VADVMAEARERIGEESPTPAISDLHDHDH 93
VADVMAEARERIGEESPTPAISDLHDHDH
Sbjct 61 VADVMAEARERIGEESPTPAISDLHDHDH 89
>gi|240172498|ref|ZP_04751157.1| hypothetical protein MkanA1_24500 [Mycobacterium kansasii ATCC
12478]
Length=93
Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/93 (82%), Positives = 83/93 (90%), Gaps = 0/93 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
MA+Q AKA TTVITGLAGVTAYE+LKK AAKAPL QTAVSAA LGLRGTRKAEEAAES
Sbjct 1 MAVQAIFAKAATTVITGLAGVTAYEVLKKVAAKAPLHQTAVSAAELGLRGTRKAEEAAES 60
Query 61 ARLKVADVMAEARERIGEESPTPAISDLHDHDH 93
ARLK++DVMAEARER+GEE+PTPA+ HDHDH
Sbjct 61 ARLKISDVMAEARERVGEEAPTPAVGHAHDHDH 93
>gi|342861473|ref|ZP_08718120.1| hypothetical protein MCOL_21411 [Mycobacterium colombiense CECT
3035]
gi|342130962|gb|EGT84251.1| hypothetical protein MCOL_21411 [Mycobacterium colombiense CECT
3035]
Length=93
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/93 (76%), Positives = 81/93 (88%), Gaps = 0/93 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
MA+ LAKA TV+TGL GVTAYE+++KA AKAPL +TAV A LGLRGTRKAEEAAES
Sbjct 1 MAVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRKAEEAAES 60
Query 61 ARLKVADVMAEARERIGEESPTPAISDLHDHDH 93
ARL++ADVMAEARERIGEE+PTP+I+D HDHDH
Sbjct 61 ARLRLADVMAEARERIGEEAPTPSIADTHDHDH 93
>gi|41409481|ref|NP_962317.1| hypothetical protein MAP3383 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398312|gb|AAS05933.1| hypothetical protein MAP_3383 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459654|gb|EGO38589.1| Protein of unknown function (DUF1490) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=93
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/93 (76%), Positives = 81/93 (88%), Gaps = 0/93 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
MA+ LAKA TV+TGL GVTAYE+++KA AKAPL +TAV A LGLRGTRKAEEAAES
Sbjct 1 MAVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRKAEEAAES 60
Query 61 ARLKVADVMAEARERIGEESPTPAISDLHDHDH 93
ARLK+ADVMAEARERIGEE+PTP+I+D HDH+H
Sbjct 61 ARLKLADVMAEARERIGEETPTPSIADTHDHEH 93
>gi|118463473|ref|YP_883375.1| hypothetical protein MAV_4234 [Mycobacterium avium 104]
gi|254776669|ref|ZP_05218185.1| hypothetical protein MaviaA2_18651 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118164760|gb|ABK65657.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=93
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/93 (76%), Positives = 81/93 (88%), Gaps = 0/93 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
MA+ LAKA TV+TGL GVTAYE+++KA AKAPL +TAV A LGLRGTRKAEEAAES
Sbjct 1 MAVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRKAEEAAES 60
Query 61 ARLKVADVMAEARERIGEESPTPAISDLHDHDH 93
ARLK+ADVMAEARERIGEE+PTP+I+D HDH+H
Sbjct 61 ARLKLADVMAEARERIGEEAPTPSIADTHDHEH 93
>gi|254821358|ref|ZP_05226359.1| hypothetical protein MintA_15582 [Mycobacterium intracellulare
ATCC 13950]
Length=93
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/93 (73%), Positives = 81/93 (88%), Gaps = 0/93 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
MA+ LAKA TV+TGL GVTAYE+++KA AKAPL +TAV A LGLRGTR+AEEAAES
Sbjct 1 MAVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRRAEEAAES 60
Query 61 ARLKVADVMAEARERIGEESPTPAISDLHDHDH 93
ARL++ADVMAEARERIGEE+PTP+I++ HDH+H
Sbjct 61 ARLRLADVMAEARERIGEEAPTPSIAEPHDHEH 93
>gi|15827316|ref|NP_301579.1| hypothetical protein ML0748 [Mycobacterium leprae TN]
gi|221229794|ref|YP_002503210.1| hypothetical protein MLBr_00748 [Mycobacterium leprae Br4923]
gi|13092865|emb|CAC30257.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932901|emb|CAR70842.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=92
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/91 (74%), Positives = 76/91 (84%), Gaps = 0/91 (0%)
Query 3 IQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESAR 62
+Q LAKA T VITGL GVTAYE+L+KA K PL Q AVSA LGLRG+RKAEEAAESAR
Sbjct 2 VQGLLAKAATMVITGLTGVTAYEMLRKAVTKVPLHQIAVSALELGLRGSRKAEEAAESAR 61
Query 63 LKVADVMAEARERIGEESPTPAISDLHDHDH 93
LK+ADVMAEARERIG+E+ PA+SD+H HDH
Sbjct 62 LKLADVMAEARERIGKETTAPAVSDIHQHDH 92
>gi|296168935|ref|ZP_06850604.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896404|gb|EFG76057.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=99
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/87 (69%), Positives = 74/87 (86%), Gaps = 0/87 (0%)
Query 7 LAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLKVA 66
KA + TG+AG AY++++KA AKAPL +TAVSAA LGLRGTRKAEEAAESARLK++
Sbjct 13 FGKAAAWLATGVAGAAAYDLVRKAVAKAPLHETAVSAAELGLRGTRKAEEAAESARLKIS 72
Query 67 DVMAEARERIGEESPTPAISDLHDHDH 93
DVMAEARER+GEE+PTPA+ + HDH+H
Sbjct 73 DVMAEARERVGEEAPTPAVGNGHDHEH 99
>gi|333991660|ref|YP_004524274.1| hypothetical protein JDM601_3020 [Mycobacterium sp. JDM601]
gi|333487628|gb|AEF37020.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=93
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/93 (68%), Positives = 74/93 (80%), Gaps = 0/93 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
MA+Q LAKA TTV TGL GV+AYE+++KA KAPL + AV A LRGTR+AEE AES
Sbjct 1 MAVQGLLAKAATTVFTGLVGVSAYEVVRKALEKAPLHEAAVIATEWSLRGTRRAEEVAES 60
Query 61 ARLKVADVMAEARERIGEESPTPAISDLHDHDH 93
ARLKVADV+AEARERIGEE+ PA++ HDHDH
Sbjct 61 ARLKVADVVAEARERIGEEATPPAVAVAHDHDH 93
>gi|118618085|ref|YP_906417.1| hypothetical protein MUL_2615 [Mycobacterium ulcerans Agy99]
gi|183981294|ref|YP_001849585.1| hypothetical protein MMAR_1272 [Mycobacterium marinum M]
gi|118570195|gb|ABL04946.1| conserved protein [Mycobacterium ulcerans Agy99]
gi|183174620|gb|ACC39730.1| conserved protein [Mycobacterium marinum M]
Length=92
Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/88 (71%), Positives = 73/88 (83%), Gaps = 1/88 (1%)
Query 6 FLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLKV 65
AK T V+ G+ G AY++++KAA KAPLRQTAVSAA L LRGTRKAEEAAESARLK+
Sbjct 6 LFAKLGTLVVHGVVGAAAYDVVRKAAKKAPLRQTAVSAAELSLRGTRKAEEAAESARLKI 65
Query 66 ADVMAEARERIGEESPTPAISDLHDHDH 93
+DVM+EARERIGEE+PTPA+ HDHDH
Sbjct 66 SDVMSEARERIGEEAPTPAVG-AHDHDH 92
>gi|118467605|ref|YP_890281.1| hypothetical protein MSMEG_6059 [Mycobacterium smegmatis str.
MC2 155]
gi|118168892|gb|ABK69788.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=94
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/94 (69%), Positives = 69/94 (74%), Gaps = 1/94 (1%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
M L KA TTV+TG GV AYE L+KA AKAP+R+ AV+ AL LRG RKAE AES
Sbjct 1 MVWHGLLVKAATTVVTGAVGVAAYEGLRKAVAKAPVREAAVATTALALRGARKAEVGAES 60
Query 61 ARLKVADVMAEARERIGEESPTPAISDL-HDHDH 93
ARLKVADVMAEARERIGEE P PA D HDHDH
Sbjct 61 ARLKVADVMAEARERIGEEVPPPAAGDAGHDHDH 94
>gi|226359852|ref|YP_002777630.1| hypothetical protein ROP_04380 [Rhodococcus opacus B4]
gi|226238337|dbj|BAH48685.1| hypothetical protein [Rhodococcus opacus B4]
Length=94
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/94 (60%), Positives = 68/94 (73%), Gaps = 1/94 (1%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
MA+ + L KA +TV+TG GV AY +K AKAPL + AV+A A GLRG RKAEE AES
Sbjct 1 MALHILLVKAASTVVTGAVGVAAYNAARKVVAKAPLHEAAVTATAWGLRGARKAEEGAES 60
Query 61 ARLKVADVMAEARERIGEESPTPAISDL-HDHDH 93
ARLKV+DV+AEAR RIGEE P P ++ H H+H
Sbjct 61 ARLKVSDVVAEARGRIGEEVPPPPDPEIGHGHNH 94
>gi|340627004|ref|YP_004745456.1| hypothetical protein MCAN_20131 [Mycobacterium canettii CIPT
140010059]
gi|340005194|emb|CCC44345.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=90
Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/84 (61%), Positives = 61/84 (73%), Gaps = 0/84 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
M L KA V+TGL GV+AYE L+KA AP+R+ +V+ GLRGTR+AE AAES
Sbjct 1 MVTHELLVKAAGAVLTGLVGVSAYETLRKALGTAPIRRASVTVMEWGLRGTRRAEVAAES 60
Query 61 ARLKVADVMAEARERIGEESPTPA 84
ARL VADV+AEAR RIGEE+P PA
Sbjct 61 ARLTVADVVAEARGRIGEEAPLPA 84
>gi|183982159|ref|YP_001850450.1| hypothetical protein MMAR_2146 [Mycobacterium marinum M]
gi|183175485|gb|ACC40595.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=93
Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/93 (60%), Positives = 71/93 (77%), Gaps = 0/93 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
M + LAKA TV+TG+ GV+AYE+L+KA AP+ + AV+ +GLRGTR AE+ AES
Sbjct 1 MIVHGLLAKAGATVVTGVVGVSAYELLRKALGSAPVHRAAVATTEVGLRGTRGAEKVAES 60
Query 61 ARLKVADVMAEARERIGEESPTPAISDLHDHDH 93
ARLKV+DV+AEARERIGEE+P PAI + H+H
Sbjct 61 ARLKVSDVVAEARERIGEEAPPPAIGNHDQHEH 93
>gi|296165061|ref|ZP_06847615.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899593|gb|EFG79045.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=85
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/79 (59%), Positives = 58/79 (74%), Gaps = 0/79 (0%)
Query 14 VITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLKVADVMAEAR 73
+ TGL GV+AYE+L+KA AP+ + AV+ GLRGTR AE AAESARLKVADV+AEAR
Sbjct 1 MFTGLVGVSAYEVLRKAVGTAPVHRAAVTVTEWGLRGTRSAEVAAESARLKVADVVAEAR 60
Query 74 ERIGEESPTPAISDLHDHD 92
RIG+++P P + D D
Sbjct 61 GRIGDDAPRPPAAKADDDD 79
>gi|340625980|ref|YP_004744432.1| hypothetical protein MCAN_09721 [Mycobacterium canettii CIPT
140010059]
gi|340004170|emb|CCC43309.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=98
Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/98 (56%), Positives = 61/98 (63%), Gaps = 5/98 (5%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLR----GTRKAEE 56
M FLAKA TV+TG GV AYE L+K KAPLR VS AA G+R RKA E
Sbjct 1 MVWHGFLAKAVPTVVTGAVGVAAYEALRKVVVKAPLRAATVSVAAWGIRLAREAERKAGE 60
Query 57 AAESARLKVADVMAEARERIGEESPTPAISDLHD-HDH 93
+AE ARL ADV+AEA ER GEE P A++ D HDH
Sbjct 61 SAEQARLMFADVLAEASERAGEEVPPLAVAGSDDGHDH 98
>gi|15840394|ref|NP_335431.1| hypothetical protein MT0996 [Mycobacterium tuberculosis CDC1551]
gi|13880562|gb|AAK45245.1| hypothetical protein MT0996 [Mycobacterium tuberculosis CDC1551]
Length=118
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/98 (56%), Positives = 61/98 (63%), Gaps = 5/98 (5%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLR----GTRKAEE 56
M FLAKA TV+TG GV AYE L+K KAPLR VS AA G+R RKA E
Sbjct 21 MVWHGFLAKAVPTVVTGAVGVAAYEALRKMVVKAPLRAATVSVAAWGIRLAREAERKAGE 80
Query 57 AAESARLKVADVMAEARERIGEESPTPAISDLHD-HDH 93
+AE ARL ADV+AEA ER GEE P A++ D HDH
Sbjct 81 SAEQARLMFADVLAEASERAGEEVPPLAVAGSDDGHDH 118
>gi|15608108|ref|NP_215483.1| hypothetical protein Rv0968 [Mycobacterium tuberculosis H37Rv]
gi|31792157|ref|NP_854650.1| hypothetical protein Mb0993 [Mycobacterium bovis AF2122/97]
gi|121636894|ref|YP_977117.1| hypothetical protein BCG_1022 [Mycobacterium bovis BCG str. Pasteur
1173P2]
68 more sequence titles
Length=98
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/98 (56%), Positives = 61/98 (63%), Gaps = 5/98 (5%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLR----GTRKAEE 56
M FLAKA TV+TG GV AYE L+K KAPLR VS AA G+R RKA E
Sbjct 1 MVWHGFLAKAVPTVVTGAVGVAAYEALRKMVVKAPLRAATVSVAAWGIRLAREAERKAGE 60
Query 57 AAESARLKVADVMAEARERIGEESPTPAISDLHD-HDH 93
+AE ARL ADV+AEA ER GEE P A++ D HDH
Sbjct 61 SAEQARLMFADVLAEASERAGEEVPPLAVAGSDDGHDH 98
>gi|240171334|ref|ZP_04749993.1| hypothetical protein MkanA1_18626 [Mycobacterium kansasii ATCC
12478]
Length=99
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 62/92 (68%), Gaps = 5/92 (5%)
Query 6 FLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGT----RKAEEAAESA 61
LAK+ T++TG+ G AYE L+K A K PLR+ V+ A GLRG RKA++++E A
Sbjct 7 LLAKSVPTLVTGVVGAAAYEALRKTAVKVPLREATVATTAWGLRGLRTAERKAQQSSEQA 66
Query 62 RLKVADVMAEARERIGEE-SPTPAISDLHDHD 92
RL +ADV+AEA+ERIGE+ S + HDHD
Sbjct 67 RLTLADVIAEAKERIGEDVSLSQVAGGCHDHD 98
>gi|183982550|ref|YP_001850841.1| hypothetical protein MMAR_2537 [Mycobacterium marinum M]
gi|183175876|gb|ACC40986.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=101
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/92 (53%), Positives = 57/92 (62%), Gaps = 8/92 (8%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTR----KAEE 56
MA QV KA TV+TG GV AYE+ + P R+ V A ALGLR R K +E
Sbjct 1 MAWQVLAGKAVHTVVTGAVGVAAYEVF----VRVPWRKATVGATALGLRAGRTTGRKTKE 56
Query 57 AAESARLKVADVMAEARERIGEESPTPAISDL 88
AAE A+L VADV+AEA ERIGE+ P P + DL
Sbjct 57 AAERAQLAVADVLAEAAERIGEQVPRPTVVDL 88
>gi|296164289|ref|ZP_06846875.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900351|gb|EFG79771.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=113
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/94 (53%), Positives = 60/94 (64%), Gaps = 4/94 (4%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEE---- 56
M + FL KA TV+TG+ GV AYE L K A KAPLR+ V A A G+R R+AE
Sbjct 18 MVLHGFLVKAAPTVLTGVVGVAAYEALCKVAGKAPLRKATVIATAWGIRVVREAERTAGA 77
Query 57 AAESARLKVADVMAEARERIGEESPTPAISDLHD 90
+AE ARL VADV+AEA+ER GEE+ + D D
Sbjct 78 SAEQARLTVADVVAEAKERAGEEAGPLTVVDSGD 111
>gi|296164259|ref|ZP_06846848.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900385|gb|EFG79802.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=93
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/83 (60%), Positives = 64/83 (78%), Gaps = 0/83 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
M LAKAT TV TGL GV+AYE++++A AP+ + AV+A GLRGTR+AE AAE+
Sbjct 1 MVAHGLLAKATRTVFTGLVGVSAYEVVRRAVGNAPVHRAAVTATEWGLRGTRRAEVAAEA 60
Query 61 ARLKVADVMAEARERIGEESPTP 83
ARLKVADV+AEAR+RIG+++ P
Sbjct 61 ARLKVADVVAEARDRIGDDASLP 83
>gi|15609130|ref|NP_216509.1| hypothetical protein Rv1993c [Mycobacterium tuberculosis H37Rv]
gi|15841475|ref|NP_336512.1| hypothetical protein MT2049 [Mycobacterium tuberculosis CDC1551]
gi|31793173|ref|NP_855666.1| hypothetical protein Mb2016c [Mycobacterium bovis AF2122/97]
64 more sequence titles
Length=90
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/84 (61%), Positives = 61/84 (73%), Gaps = 0/84 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
M L KA V+TGL GV+AYE L+KA AP+R+ +V+ GLRGTR+AE AAES
Sbjct 1 MVTHELLVKAAGAVLTGLVGVSAYETLRKALGTAPIRRASVTVMEWGLRGTRRAEAAAES 60
Query 61 ARLKVADVMAEARERIGEESPTPA 84
ARL VADV+AEAR RIGEE+P PA
Sbjct 61 ARLTVADVVAEARGRIGEEAPLPA 84
>gi|167970478|ref|ZP_02552755.1| hypothetical protein MtubH3_21593 [Mycobacterium tuberculosis
H37Ra]
Length=101
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/79 (64%), Positives = 60/79 (76%), Gaps = 0/79 (0%)
Query 6 FLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLKV 65
L KA V+TGL GV+AYE L+KA AP+R+ +V+ GLRGTR+AE AAESARL V
Sbjct 17 LLVKAAGAVLTGLVGVSAYETLRKALGTAPIRRASVTVMEWGLRGTRRAEAAAESARLTV 76
Query 66 ADVMAEARERIGEESPTPA 84
ADV+AEAR RIGEE+P PA
Sbjct 77 ADVVAEARGRIGEEAPLPA 95
>gi|183981452|ref|YP_001849743.1| hypothetical protein MMAR_1430 [Mycobacterium marinum M]
gi|183174778|gb|ACC39888.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=98
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/98 (54%), Positives = 64/98 (66%), Gaps = 5/98 (5%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAE----E 56
MA Q F+ K V TG+ GV AYE L+K AKAPLR+ +V+ A GLR R+AE +
Sbjct 1 MAWQGFVVKGAHAVGTGVVGVVAYEALRKTLAKAPLRKASVATTAWGLRVVREAERKAGQ 60
Query 57 AAESARLKVADVMAEARERIGEE-SPTPAISDLHDHDH 93
+AE ARL VADVMAEA+ER GEE +P + DHDH
Sbjct 61 SAEQARLTVADVMAEAKERAGEEVAPLTVVDSGSDHDH 98
>gi|289570093|ref|ZP_06450320.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289750575|ref|ZP_06509953.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289754099|ref|ZP_06513477.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289543847|gb|EFD47495.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289691162|gb|EFD58591.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289694686|gb|EFD62115.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=90
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/84 (60%), Positives = 61/84 (73%), Gaps = 0/84 (0%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
M L KA V+TGL GV+AYE ++KA AP+R+ +V+ GLRGTR+AE AAES
Sbjct 1 MVTHELLVKAAGAVLTGLVGVSAYETVRKALGTAPIRRASVTVMEWGLRGTRRAEAAAES 60
Query 61 ARLKVADVMAEARERIGEESPTPA 84
ARL VADV+AEAR RIGEE+P PA
Sbjct 61 ARLTVADVVAEARGRIGEEAPLPA 84
>gi|325000600|ref|ZP_08121712.1| hypothetical protein PseP1_17612 [Pseudonocardia sp. P1]
Length=88
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/78 (49%), Positives = 50/78 (65%), Gaps = 0/78 (0%)
Query 6 FLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLKV 65
+ KA V +GLAG AY+ +K+ A +R+ AV+ GLRG R AE AE ARL
Sbjct 1 MVGKAAGLVASGLAGAVAYDGVKRVARSGAVREAAVTVTGWGLRGARAAETGAEKARLAT 60
Query 66 ADVMAEARERIGEESPTP 83
AD+++EAR RIGEE+P P
Sbjct 61 ADIVSEARGRIGEEAPAP 78
>gi|333919412|ref|YP_004492993.1| hypothetical protein AS9A_1744 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481633|gb|AEF40193.1| hypothetical protein AS9A_1744 [Amycolicicoccus subflavus DQS3-9A1]
Length=94
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/94 (53%), Positives = 60/94 (64%), Gaps = 1/94 (1%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
M V L KA TV+TG+ GV AY + A K P R+ AVSA ALG++G RKAEE AE+
Sbjct 1 MIHGVLLGKALGTVVTGVVGVAAYNGARWVAKKTPTREIAVSATALGIKGARKAEEGAEN 60
Query 61 ARLKVADVMAEARERIGEESPTPAISDL-HDHDH 93
RL AD++AEAR R+GEE+P P H H H
Sbjct 61 VRLTAADIVAEARGRVGEEAPPPPSHPAGHGHAH 94
>gi|296164642|ref|ZP_06847208.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899950|gb|EFG79390.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=90
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/79 (57%), Positives = 53/79 (68%), Gaps = 8/79 (10%)
Query 6 FLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEE----AAESA 61
F+AKA TV+TG+ GV AYE L AKAP R+ V A A G+R R+AE +AE A
Sbjct 4 FVAKAMPTVMTGVVGVAAYEAL----AKAPWRKATVVATAWGIRVAREAERKAGRSAEQA 59
Query 62 RLKVADVMAEARERIGEES 80
RL VADVMAEARER G E+
Sbjct 60 RLTVADVMAEARERAGSEA 78
>gi|258653982|ref|YP_003203138.1| hypothetical protein Namu_3853 [Nakamurella multipartita DSM
44233]
gi|258557207|gb|ACV80149.1| hypothetical protein Namu_3853 [Nakamurella multipartita DSM
44233]
Length=94
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/87 (46%), Positives = 56/87 (65%), Gaps = 1/87 (1%)
Query 8 AKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLKVAD 67
A+A +I+G+AG + LK+ + L Q AV+ AL LRG R+ E AE+ RL D
Sbjct 8 ARAAGMLISGVAGAIVVDRLKQRSTGRGLNQAAVAVTALALRGKRRVEAGAENLRLGAGD 67
Query 68 VMAEARERIGEESPTPAIS-DLHDHDH 93
V+A+ARE+IGE++P PA S H+HDH
Sbjct 68 VVAQAREKIGEQAPPPAQSAQPHEHDH 94
>gi|296165052|ref|ZP_06847606.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899584|gb|EFG79036.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=139
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 61/98 (63%), Gaps = 9/98 (9%)
Query 1 MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
MA FL KA TV+TG+ GV AYE ++ A AK PLR V+ A G+R R+A+ AE+
Sbjct 42 MAWHGFLMKAAPTVVTGVVGVAAYEAVRTAVAKVPLRTATVAVTAWGIRAAREAQRTAET 101
Query 61 A----RLKVADVMAEARERIGEESPTPAI----SDLHD 90
RL VADV+AEARER GE++ PAI D HD
Sbjct 102 NTEQIRLTVADVVAEARERAGEDT-EPAIVTSPGDGHD 138
>gi|183984843|ref|YP_001853134.1| hypothetical protein MMAR_4875 [Mycobacterium marinum M]
gi|183178169|gb|ACC43279.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=102
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/66 (49%), Positives = 38/66 (58%), Gaps = 9/66 (13%)
Query 24 YEILKKAAAKAPLRQTAVSAAALGLRGTR----KAEEAAESARLKVADVMAEARERIGEE 79
YE L AKAP R V+A GLR R K ++A E RL ADV+AEA ER+G E
Sbjct 25 YEAL----AKAPWRSATVTATVWGLRTARTTERKTKQATERVRLAAADVLAEAVERVGAE 80
Query 80 -SPTPA 84
+P PA
Sbjct 81 VAPPPA 86
>gi|152964259|ref|YP_001360043.1| hypothetical protein Krad_0289 [Kineococcus radiotolerans SRS30216]
gi|151358776|gb|ABS01779.1| hypothetical protein Krad_0289 [Kineococcus radiotolerans SRS30216]
Length=102
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/59 (39%), Positives = 35/59 (60%), Gaps = 1/59 (1%)
Query 36 LRQTAVSAAALGLRGTRKAEEAAESARLKVADVMAEARERIGEESPTPAISDL-HDHDH 93
LR+ AV+ A G++ +R AE E RL D++A+A + +GE+ P P HDH+H
Sbjct 44 LRRLAVNGAKAGIKASRAAETGVERLRLGTGDIVAQAYDELGEQVPVPPTPQAGHDHEH 102
>gi|296164386|ref|ZP_06846962.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900266|gb|EFG79696.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=103
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/48 (53%), Positives = 32/48 (67%), Gaps = 4/48 (8%)
Query 35 PLRQTAVSAAALGLRGTR----KAEEAAESARLKVADVMAEARERIGE 78
P R+ V A A+GL+ TR K ++AAE ARL ADV AEA +R+GE
Sbjct 33 PWRKVTVGATAVGLQATRTTARKTKQAAEKARLATADVFAEAADRLGE 80
>gi|118616275|ref|YP_904607.1| hypothetical protein MUL_0424 [Mycobacterium ulcerans Agy99]
gi|118568385|gb|ABL03136.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=102
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/68 (48%), Positives = 37/68 (55%), Gaps = 8/68 (11%)
Query 24 YEILKKAAAKAPLRQTAVSAAALGLRGTRKA----EEAAESARLKVADVMAEARERIGEE 79
YE L AKAP R V+A A GLR R ++A E RL ADV+AEA ER+G E
Sbjct 25 YEAL----AKAPWRSATVTATAWGLRTARTTERRTKQATERVRLAAADVLAEAVERVGAE 80
Query 80 SPTPAISD 87
PA D
Sbjct 81 VAPPAAKD 88
>gi|289749496|ref|ZP_06508874.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289690083|gb|EFD57512.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=54
Score = 37.7 bits (86), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/47 (47%), Positives = 27/47 (58%), Gaps = 4/47 (8%)
Query 14 VITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES 60
++TG GV AYE L+K KAPLR VS RG R+A +A S
Sbjct 1 MVTGAVGVAAYEALRKMVVKAPLRAATVSVD----RGARRARLSANS 43
Lambda K H
0.313 0.124 0.325
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127811470620
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40