BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3269

Length=93
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15842859|ref|NP_337896.1|  hypothetical protein MT3369 [Mycoba...   183    7e-45
gi|15610405|ref|NP_217786.1|  hypothetical protein Rv3269 [Mycoba...   182    2e-44
gi|308232401|ref|ZP_07415935.2|  hypothetical protein TMAG_02722 ...   172    1e-41
gi|240172498|ref|ZP_04751157.1|  hypothetical protein MkanA1_2450...   154    4e-36
gi|342861473|ref|ZP_08718120.1|  hypothetical protein MCOL_21411 ...   143    1e-32
gi|41409481|ref|NP_962317.1|  hypothetical protein MAP3383 [Mycob...   142    1e-32
gi|118463473|ref|YP_883375.1|  hypothetical protein MAV_4234 [Myc...   142    2e-32
gi|254821358|ref|ZP_05226359.1|  hypothetical protein MintA_15582...   137    4e-31
gi|15827316|ref|NP_301579.1|  hypothetical protein ML0748 [Mycoba...   135    1e-30
gi|296168935|ref|ZP_06850604.1|  conserved hypothetical protein [...   125    1e-27
gi|333991660|ref|YP_004524274.1|  hypothetical protein JDM601_302...   124    4e-27
gi|118618085|ref|YP_906417.1|  hypothetical protein MUL_2615 [Myc...   124    6e-27
gi|118467605|ref|YP_890281.1|  hypothetical protein MSMEG_6059 [M...   108    2e-22
gi|226359852|ref|YP_002777630.1|  hypothetical protein ROP_04380 ...  99.0    2e-19
gi|340627004|ref|YP_004745456.1|  hypothetical protein MCAN_20131...  97.1    9e-19
gi|183982159|ref|YP_001850450.1|  hypothetical protein MMAR_2146 ...  93.6    9e-18
gi|296165061|ref|ZP_06847615.1|  conserved hypothetical protein [...  91.7    4e-17
gi|340625980|ref|YP_004744432.1|  hypothetical protein MCAN_09721...  90.9    6e-17
gi|15840394|ref|NP_335431.1|  hypothetical protein MT0996 [Mycoba...  90.5    8e-17
gi|15608108|ref|NP_215483.1|  hypothetical protein Rv0968 [Mycoba...  90.5    8e-17
gi|240171334|ref|ZP_04749993.1|  hypothetical protein MkanA1_1862...  86.3    1e-15
gi|183982550|ref|YP_001850841.1|  hypothetical protein MMAR_2537 ...  82.4    2e-14
gi|296164289|ref|ZP_06846875.1|  conserved hypothetical protein [...  82.4    2e-14
gi|296164259|ref|ZP_06846848.1|  conserved hypothetical protein [...  81.6    3e-14
gi|15609130|ref|NP_216509.1|  hypothetical protein Rv1993c [Mycob...  78.6    3e-13
gi|167970478|ref|ZP_02552755.1|  hypothetical protein MtubH3_2159...  78.2    3e-13
gi|183981452|ref|YP_001849743.1|  hypothetical protein MMAR_1430 ...  78.2    4e-13
gi|289570093|ref|ZP_06450320.1|  conserved hypothetical protein [...  77.4    7e-13
gi|325000600|ref|ZP_08121712.1|  hypothetical protein PseP1_17612...  73.9    7e-12
gi|333919412|ref|YP_004492993.1|  hypothetical protein AS9A_1744 ...  73.6    9e-12
gi|296164642|ref|ZP_06847208.1|  conserved hypothetical protein [...  72.8    2e-11
gi|258653982|ref|YP_003203138.1|  hypothetical protein Namu_3853 ...  64.3    5e-09
gi|296165052|ref|ZP_06847606.1|  conserved hypothetical protein [...  61.2    4e-08
gi|183984843|ref|YP_001853134.1|  hypothetical protein MMAR_4875 ...  48.1    5e-04
gi|152964259|ref|YP_001360043.1|  hypothetical protein Krad_0289 ...  47.4    7e-04
gi|296164386|ref|ZP_06846962.1|  conserved hypothetical protein [...  45.1    0.004
gi|118616275|ref|YP_904607.1|  hypothetical protein MUL_0424 [Myc...  43.9    0.009
gi|289749496|ref|ZP_06508874.1|  conserved hypothetical protein [...  37.7    0.62 


>gi|15842859|ref|NP_337896.1| hypothetical protein MT3369 [Mycobacterium tuberculosis CDC1551]
 gi|13883189|gb|AAK47710.1| hypothetical protein MT3369 [Mycobacterium tuberculosis CDC1551]
Length=145

 Score =  183 bits (464),  Expect = 7e-45, Method: Compositional matrix adjust.
 Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)

Query  1    MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
            MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES
Sbjct  53   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  112

Query  61   ARLKVADVMAEARERIGEESPTPAISDLHDHDH  93
            ARLKVADVMAEARERIGEESPTPAISDLHDHDH
Sbjct  113  ARLKVADVMAEARERIGEESPTPAISDLHDHDH  145


>gi|15610405|ref|NP_217786.1| hypothetical protein Rv3269 [Mycobacterium tuberculosis H37Rv]
 gi|31794449|ref|NP_856942.1| hypothetical protein Mb3297 [Mycobacterium bovis AF2122/97]
 gi|121639158|ref|YP_979382.1| hypothetical protein BCG_3298 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 65 more sequence titles
 Length=93

 Score =  182 bits (461),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES
Sbjct  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60

Query  61  ARLKVADVMAEARERIGEESPTPAISDLHDHDH  93
           ARLKVADVMAEARERIGEESPTPAISDLHDHDH
Sbjct  61  ARLKVADVMAEARERIGEESPTPAISDLHDHDH  93


>gi|308232401|ref|ZP_07415935.2| hypothetical protein TMAG_02722 [Mycobacterium tuberculosis SUMu001]
 gi|308370210|ref|ZP_07420657.2| hypothetical protein TMBG_01964 [Mycobacterium tuberculosis SUMu002]
 gi|308373690|ref|ZP_07433333.2| hypothetical protein TMEG_03666 [Mycobacterium tuberculosis SUMu005]
 9 more sequence titles
 Length=89

 Score =  172 bits (436),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 88/89 (99%), Positives = 89/89 (100%), Gaps = 0/89 (0%)

Query  5   VFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLK  64
           +FLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLK
Sbjct  1   MFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLK  60

Query  65  VADVMAEARERIGEESPTPAISDLHDHDH  93
           VADVMAEARERIGEESPTPAISDLHDHDH
Sbjct  61  VADVMAEARERIGEESPTPAISDLHDHDH  89


>gi|240172498|ref|ZP_04751157.1| hypothetical protein MkanA1_24500 [Mycobacterium kansasii ATCC 
12478]
Length=93

 Score =  154 bits (389),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 76/93 (82%), Positives = 83/93 (90%), Gaps = 0/93 (0%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           MA+Q   AKA TTVITGLAGVTAYE+LKK AAKAPL QTAVSAA LGLRGTRKAEEAAES
Sbjct  1   MAVQAIFAKAATTVITGLAGVTAYEVLKKVAAKAPLHQTAVSAAELGLRGTRKAEEAAES  60

Query  61  ARLKVADVMAEARERIGEESPTPAISDLHDHDH  93
           ARLK++DVMAEARER+GEE+PTPA+   HDHDH
Sbjct  61  ARLKISDVMAEARERVGEEAPTPAVGHAHDHDH  93


>gi|342861473|ref|ZP_08718120.1| hypothetical protein MCOL_21411 [Mycobacterium colombiense CECT 
3035]
 gi|342130962|gb|EGT84251.1| hypothetical protein MCOL_21411 [Mycobacterium colombiense CECT 
3035]
Length=93

 Score =  143 bits (360),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 70/93 (76%), Positives = 81/93 (88%), Gaps = 0/93 (0%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           MA+   LAKA  TV+TGL GVTAYE+++KA AKAPL +TAV  A LGLRGTRKAEEAAES
Sbjct  1   MAVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRKAEEAAES  60

Query  61  ARLKVADVMAEARERIGEESPTPAISDLHDHDH  93
           ARL++ADVMAEARERIGEE+PTP+I+D HDHDH
Sbjct  61  ARLRLADVMAEARERIGEEAPTPSIADTHDHDH  93


>gi|41409481|ref|NP_962317.1| hypothetical protein MAP3383 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398312|gb|AAS05933.1| hypothetical protein MAP_3383 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336459654|gb|EGO38589.1| Protein of unknown function (DUF1490) [Mycobacterium avium subsp. 
paratuberculosis S397]
Length=93

 Score =  142 bits (358),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 70/93 (76%), Positives = 81/93 (88%), Gaps = 0/93 (0%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           MA+   LAKA  TV+TGL GVTAYE+++KA AKAPL +TAV  A LGLRGTRKAEEAAES
Sbjct  1   MAVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRKAEEAAES  60

Query  61  ARLKVADVMAEARERIGEESPTPAISDLHDHDH  93
           ARLK+ADVMAEARERIGEE+PTP+I+D HDH+H
Sbjct  61  ARLKLADVMAEARERIGEETPTPSIADTHDHEH  93


>gi|118463473|ref|YP_883375.1| hypothetical protein MAV_4234 [Mycobacterium avium 104]
 gi|254776669|ref|ZP_05218185.1| hypothetical protein MaviaA2_18651 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|118164760|gb|ABK65657.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=93

 Score =  142 bits (358),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 70/93 (76%), Positives = 81/93 (88%), Gaps = 0/93 (0%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           MA+   LAKA  TV+TGL GVTAYE+++KA AKAPL +TAV  A LGLRGTRKAEEAAES
Sbjct  1   MAVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRKAEEAAES  60

Query  61  ARLKVADVMAEARERIGEESPTPAISDLHDHDH  93
           ARLK+ADVMAEARERIGEE+PTP+I+D HDH+H
Sbjct  61  ARLKLADVMAEARERIGEEAPTPSIADTHDHEH  93


>gi|254821358|ref|ZP_05226359.1| hypothetical protein MintA_15582 [Mycobacterium intracellulare 
ATCC 13950]
Length=93

 Score =  137 bits (346),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 67/93 (73%), Positives = 81/93 (88%), Gaps = 0/93 (0%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           MA+   LAKA  TV+TGL GVTAYE+++KA AKAPL +TAV  A LGLRGTR+AEEAAES
Sbjct  1   MAVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRRAEEAAES  60

Query  61  ARLKVADVMAEARERIGEESPTPAISDLHDHDH  93
           ARL++ADVMAEARERIGEE+PTP+I++ HDH+H
Sbjct  61  ARLRLADVMAEARERIGEEAPTPSIAEPHDHEH  93


>gi|15827316|ref|NP_301579.1| hypothetical protein ML0748 [Mycobacterium leprae TN]
 gi|221229794|ref|YP_002503210.1| hypothetical protein MLBr_00748 [Mycobacterium leprae Br4923]
 gi|13092865|emb|CAC30257.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219932901|emb|CAR70842.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=92

 Score =  135 bits (341),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 67/91 (74%), Positives = 76/91 (84%), Gaps = 0/91 (0%)

Query  3   IQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESAR  62
           +Q  LAKA T VITGL GVTAYE+L+KA  K PL Q AVSA  LGLRG+RKAEEAAESAR
Sbjct  2   VQGLLAKAATMVITGLTGVTAYEMLRKAVTKVPLHQIAVSALELGLRGSRKAEEAAESAR  61

Query  63  LKVADVMAEARERIGEESPTPAISDLHDHDH  93
           LK+ADVMAEARERIG+E+  PA+SD+H HDH
Sbjct  62  LKLADVMAEARERIGKETTAPAVSDIHQHDH  92


>gi|296168935|ref|ZP_06850604.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295896404|gb|EFG76057.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=99

 Score =  125 bits (315),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 60/87 (69%), Positives = 74/87 (86%), Gaps = 0/87 (0%)

Query  7   LAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLKVA  66
             KA   + TG+AG  AY++++KA AKAPL +TAVSAA LGLRGTRKAEEAAESARLK++
Sbjct  13  FGKAAAWLATGVAGAAAYDLVRKAVAKAPLHETAVSAAELGLRGTRKAEEAAESARLKIS  72

Query  67  DVMAEARERIGEESPTPAISDLHDHDH  93
           DVMAEARER+GEE+PTPA+ + HDH+H
Sbjct  73  DVMAEARERVGEEAPTPAVGNGHDHEH  99


>gi|333991660|ref|YP_004524274.1| hypothetical protein JDM601_3020 [Mycobacterium sp. JDM601]
 gi|333487628|gb|AEF37020.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=93

 Score =  124 bits (311),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 63/93 (68%), Positives = 74/93 (80%), Gaps = 0/93 (0%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           MA+Q  LAKA TTV TGL GV+AYE+++KA  KAPL + AV A    LRGTR+AEE AES
Sbjct  1   MAVQGLLAKAATTVFTGLVGVSAYEVVRKALEKAPLHEAAVIATEWSLRGTRRAEEVAES  60

Query  61  ARLKVADVMAEARERIGEESPTPAISDLHDHDH  93
           ARLKVADV+AEARERIGEE+  PA++  HDHDH
Sbjct  61  ARLKVADVVAEARERIGEEATPPAVAVAHDHDH  93


>gi|118618085|ref|YP_906417.1| hypothetical protein MUL_2615 [Mycobacterium ulcerans Agy99]
 gi|183981294|ref|YP_001849585.1| hypothetical protein MMAR_1272 [Mycobacterium marinum M]
 gi|118570195|gb|ABL04946.1| conserved protein [Mycobacterium ulcerans Agy99]
 gi|183174620|gb|ACC39730.1| conserved protein [Mycobacterium marinum M]
Length=92

 Score =  124 bits (310),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 62/88 (71%), Positives = 73/88 (83%), Gaps = 1/88 (1%)

Query  6   FLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLKV  65
             AK  T V+ G+ G  AY++++KAA KAPLRQTAVSAA L LRGTRKAEEAAESARLK+
Sbjct  6   LFAKLGTLVVHGVVGAAAYDVVRKAAKKAPLRQTAVSAAELSLRGTRKAEEAAESARLKI  65

Query  66  ADVMAEARERIGEESPTPAISDLHDHDH  93
           +DVM+EARERIGEE+PTPA+   HDHDH
Sbjct  66  SDVMSEARERIGEEAPTPAVG-AHDHDH  92


>gi|118467605|ref|YP_890281.1| hypothetical protein MSMEG_6059 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118168892|gb|ABK69788.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=94

 Score =  108 bits (271),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 64/94 (69%), Positives = 69/94 (74%), Gaps = 1/94 (1%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           M     L KA TTV+TG  GV AYE L+KA AKAP+R+ AV+  AL LRG RKAE  AES
Sbjct  1   MVWHGLLVKAATTVVTGAVGVAAYEGLRKAVAKAPVREAAVATTALALRGARKAEVGAES  60

Query  61  ARLKVADVMAEARERIGEESPTPAISDL-HDHDH  93
           ARLKVADVMAEARERIGEE P PA  D  HDHDH
Sbjct  61  ARLKVADVMAEARERIGEEVPPPAAGDAGHDHDH  94


>gi|226359852|ref|YP_002777630.1| hypothetical protein ROP_04380 [Rhodococcus opacus B4]
 gi|226238337|dbj|BAH48685.1| hypothetical protein [Rhodococcus opacus B4]
Length=94

 Score = 99.0 bits (245),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 56/94 (60%), Positives = 68/94 (73%), Gaps = 1/94 (1%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           MA+ + L KA +TV+TG  GV AY   +K  AKAPL + AV+A A GLRG RKAEE AES
Sbjct  1   MALHILLVKAASTVVTGAVGVAAYNAARKVVAKAPLHEAAVTATAWGLRGARKAEEGAES  60

Query  61  ARLKVADVMAEARERIGEESPTPAISDL-HDHDH  93
           ARLKV+DV+AEAR RIGEE P P   ++ H H+H
Sbjct  61  ARLKVSDVVAEARGRIGEEVPPPPDPEIGHGHNH  94


>gi|340627004|ref|YP_004745456.1| hypothetical protein MCAN_20131 [Mycobacterium canettii CIPT 
140010059]
 gi|340005194|emb|CCC44345.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=90

 Score = 97.1 bits (240),  Expect = 9e-19, Method: Compositional matrix adjust.
 Identities = 51/84 (61%), Positives = 61/84 (73%), Gaps = 0/84 (0%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           M     L KA   V+TGL GV+AYE L+KA   AP+R+ +V+    GLRGTR+AE AAES
Sbjct  1   MVTHELLVKAAGAVLTGLVGVSAYETLRKALGTAPIRRASVTVMEWGLRGTRRAEVAAES  60

Query  61  ARLKVADVMAEARERIGEESPTPA  84
           ARL VADV+AEAR RIGEE+P PA
Sbjct  61  ARLTVADVVAEARGRIGEEAPLPA  84


>gi|183982159|ref|YP_001850450.1| hypothetical protein MMAR_2146 [Mycobacterium marinum M]
 gi|183175485|gb|ACC40595.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=93

 Score = 93.6 bits (231),  Expect = 9e-18, Method: Compositional matrix adjust.
 Identities = 55/93 (60%), Positives = 71/93 (77%), Gaps = 0/93 (0%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           M +   LAKA  TV+TG+ GV+AYE+L+KA   AP+ + AV+   +GLRGTR AE+ AES
Sbjct  1   MIVHGLLAKAGATVVTGVVGVSAYELLRKALGSAPVHRAAVATTEVGLRGTRGAEKVAES  60

Query  61  ARLKVADVMAEARERIGEESPTPAISDLHDHDH  93
           ARLKV+DV+AEARERIGEE+P PAI +   H+H
Sbjct  61  ARLKVSDVVAEARERIGEEAPPPAIGNHDQHEH  93


>gi|296165061|ref|ZP_06847615.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295899593|gb|EFG79045.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=85

 Score = 91.7 bits (226),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 46/79 (59%), Positives = 58/79 (74%), Gaps = 0/79 (0%)

Query  14  VITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLKVADVMAEAR  73
           + TGL GV+AYE+L+KA   AP+ + AV+    GLRGTR AE AAESARLKVADV+AEAR
Sbjct  1   MFTGLVGVSAYEVLRKAVGTAPVHRAAVTVTEWGLRGTRSAEVAAESARLKVADVVAEAR  60

Query  74  ERIGEESPTPAISDLHDHD  92
            RIG+++P P  +   D D
Sbjct  61  GRIGDDAPRPPAAKADDDD  79


>gi|340625980|ref|YP_004744432.1| hypothetical protein MCAN_09721 [Mycobacterium canettii CIPT 
140010059]
 gi|340004170|emb|CCC43309.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=98

 Score = 90.9 bits (224),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 54/98 (56%), Positives = 61/98 (63%), Gaps = 5/98 (5%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLR----GTRKAEE  56
           M    FLAKA  TV+TG  GV AYE L+K   KAPLR   VS AA G+R      RKA E
Sbjct  1   MVWHGFLAKAVPTVVTGAVGVAAYEALRKVVVKAPLRAATVSVAAWGIRLAREAERKAGE  60

Query  57  AAESARLKVADVMAEARERIGEESPTPAISDLHD-HDH  93
           +AE ARL  ADV+AEA ER GEE P  A++   D HDH
Sbjct  61  SAEQARLMFADVLAEASERAGEEVPPLAVAGSDDGHDH  98


>gi|15840394|ref|NP_335431.1| hypothetical protein MT0996 [Mycobacterium tuberculosis CDC1551]
 gi|13880562|gb|AAK45245.1| hypothetical protein MT0996 [Mycobacterium tuberculosis CDC1551]
Length=118

 Score = 90.5 bits (223),  Expect = 8e-17, Method: Compositional matrix adjust.
 Identities = 54/98 (56%), Positives = 61/98 (63%), Gaps = 5/98 (5%)

Query  1    MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLR----GTRKAEE  56
            M    FLAKA  TV+TG  GV AYE L+K   KAPLR   VS AA G+R      RKA E
Sbjct  21   MVWHGFLAKAVPTVVTGAVGVAAYEALRKMVVKAPLRAATVSVAAWGIRLAREAERKAGE  80

Query  57   AAESARLKVADVMAEARERIGEESPTPAISDLHD-HDH  93
            +AE ARL  ADV+AEA ER GEE P  A++   D HDH
Sbjct  81   SAEQARLMFADVLAEASERAGEEVPPLAVAGSDDGHDH  118


>gi|15608108|ref|NP_215483.1| hypothetical protein Rv0968 [Mycobacterium tuberculosis H37Rv]
 gi|31792157|ref|NP_854650.1| hypothetical protein Mb0993 [Mycobacterium bovis AF2122/97]
 gi|121636894|ref|YP_977117.1| hypothetical protein BCG_1022 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 68 more sequence titles
 Length=98

 Score = 90.5 bits (223),  Expect = 8e-17, Method: Compositional matrix adjust.
 Identities = 54/98 (56%), Positives = 61/98 (63%), Gaps = 5/98 (5%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLR----GTRKAEE  56
           M    FLAKA  TV+TG  GV AYE L+K   KAPLR   VS AA G+R      RKA E
Sbjct  1   MVWHGFLAKAVPTVVTGAVGVAAYEALRKMVVKAPLRAATVSVAAWGIRLAREAERKAGE  60

Query  57  AAESARLKVADVMAEARERIGEESPTPAISDLHD-HDH  93
           +AE ARL  ADV+AEA ER GEE P  A++   D HDH
Sbjct  61  SAEQARLMFADVLAEASERAGEEVPPLAVAGSDDGHDH  98


>gi|240171334|ref|ZP_04749993.1| hypothetical protein MkanA1_18626 [Mycobacterium kansasii ATCC 
12478]
Length=99

 Score = 86.3 bits (212),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 62/92 (68%), Gaps = 5/92 (5%)

Query  6   FLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGT----RKAEEAAESA  61
            LAK+  T++TG+ G  AYE L+K A K PLR+  V+  A GLRG     RKA++++E A
Sbjct  7   LLAKSVPTLVTGVVGAAAYEALRKTAVKVPLREATVATTAWGLRGLRTAERKAQQSSEQA  66

Query  62  RLKVADVMAEARERIGEE-SPTPAISDLHDHD  92
           RL +ADV+AEA+ERIGE+ S +      HDHD
Sbjct  67  RLTLADVIAEAKERIGEDVSLSQVAGGCHDHD  98


>gi|183982550|ref|YP_001850841.1| hypothetical protein MMAR_2537 [Mycobacterium marinum M]
 gi|183175876|gb|ACC40986.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=101

 Score = 82.4 bits (202),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 48/92 (53%), Positives = 57/92 (62%), Gaps = 8/92 (8%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTR----KAEE  56
           MA QV   KA  TV+TG  GV AYE+      + P R+  V A ALGLR  R    K +E
Sbjct  1   MAWQVLAGKAVHTVVTGAVGVAAYEVF----VRVPWRKATVGATALGLRAGRTTGRKTKE  56

Query  57  AAESARLKVADVMAEARERIGEESPTPAISDL  88
           AAE A+L VADV+AEA ERIGE+ P P + DL
Sbjct  57  AAERAQLAVADVLAEAAERIGEQVPRPTVVDL  88


>gi|296164289|ref|ZP_06846875.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295900351|gb|EFG79771.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=113

 Score = 82.4 bits (202),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 49/94 (53%), Positives = 60/94 (64%), Gaps = 4/94 (4%)

Query  1    MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEE----  56
            M +  FL KA  TV+TG+ GV AYE L K A KAPLR+  V A A G+R  R+AE     
Sbjct  18   MVLHGFLVKAAPTVLTGVVGVAAYEALCKVAGKAPLRKATVIATAWGIRVVREAERTAGA  77

Query  57   AAESARLKVADVMAEARERIGEESPTPAISDLHD  90
            +AE ARL VADV+AEA+ER GEE+    + D  D
Sbjct  78   SAEQARLTVADVVAEAKERAGEEAGPLTVVDSGD  111


>gi|296164259|ref|ZP_06846848.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295900385|gb|EFG79802.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=93

 Score = 81.6 bits (200),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 49/83 (60%), Positives = 64/83 (78%), Gaps = 0/83 (0%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           M     LAKAT TV TGL GV+AYE++++A   AP+ + AV+A   GLRGTR+AE AAE+
Sbjct  1   MVAHGLLAKATRTVFTGLVGVSAYEVVRRAVGNAPVHRAAVTATEWGLRGTRRAEVAAEA  60

Query  61  ARLKVADVMAEARERIGEESPTP  83
           ARLKVADV+AEAR+RIG+++  P
Sbjct  61  ARLKVADVVAEARDRIGDDASLP  83


>gi|15609130|ref|NP_216509.1| hypothetical protein Rv1993c [Mycobacterium tuberculosis H37Rv]
 gi|15841475|ref|NP_336512.1| hypothetical protein MT2049 [Mycobacterium tuberculosis CDC1551]
 gi|31793173|ref|NP_855666.1| hypothetical protein Mb2016c [Mycobacterium bovis AF2122/97]
 64 more sequence titles
 Length=90

 Score = 78.6 bits (192),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 51/84 (61%), Positives = 61/84 (73%), Gaps = 0/84 (0%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           M     L KA   V+TGL GV+AYE L+KA   AP+R+ +V+    GLRGTR+AE AAES
Sbjct  1   MVTHELLVKAAGAVLTGLVGVSAYETLRKALGTAPIRRASVTVMEWGLRGTRRAEAAAES  60

Query  61  ARLKVADVMAEARERIGEESPTPA  84
           ARL VADV+AEAR RIGEE+P PA
Sbjct  61  ARLTVADVVAEARGRIGEEAPLPA  84


>gi|167970478|ref|ZP_02552755.1| hypothetical protein MtubH3_21593 [Mycobacterium tuberculosis 
H37Ra]
Length=101

 Score = 78.2 bits (191),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 50/79 (64%), Positives = 60/79 (76%), Gaps = 0/79 (0%)

Query  6   FLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLKV  65
            L KA   V+TGL GV+AYE L+KA   AP+R+ +V+    GLRGTR+AE AAESARL V
Sbjct  17  LLVKAAGAVLTGLVGVSAYETLRKALGTAPIRRASVTVMEWGLRGTRRAEAAAESARLTV  76

Query  66  ADVMAEARERIGEESPTPA  84
           ADV+AEAR RIGEE+P PA
Sbjct  77  ADVVAEARGRIGEEAPLPA  95


>gi|183981452|ref|YP_001849743.1| hypothetical protein MMAR_1430 [Mycobacterium marinum M]
 gi|183174778|gb|ACC39888.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=98

 Score = 78.2 bits (191),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 52/98 (54%), Positives = 64/98 (66%), Gaps = 5/98 (5%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAE----E  56
           MA Q F+ K    V TG+ GV AYE L+K  AKAPLR+ +V+  A GLR  R+AE    +
Sbjct  1   MAWQGFVVKGAHAVGTGVVGVVAYEALRKTLAKAPLRKASVATTAWGLRVVREAERKAGQ  60

Query  57  AAESARLKVADVMAEARERIGEE-SPTPAISDLHDHDH  93
           +AE ARL VADVMAEA+ER GEE +P   +    DHDH
Sbjct  61  SAEQARLTVADVMAEAKERAGEEVAPLTVVDSGSDHDH  98


>gi|289570093|ref|ZP_06450320.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289750575|ref|ZP_06509953.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754099|ref|ZP_06513477.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289543847|gb|EFD47495.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289691162|gb|EFD58591.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289694686|gb|EFD62115.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=90

 Score = 77.4 bits (189),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 50/84 (60%), Positives = 61/84 (73%), Gaps = 0/84 (0%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           M     L KA   V+TGL GV+AYE ++KA   AP+R+ +V+    GLRGTR+AE AAES
Sbjct  1   MVTHELLVKAAGAVLTGLVGVSAYETVRKALGTAPIRRASVTVMEWGLRGTRRAEAAAES  60

Query  61  ARLKVADVMAEARERIGEESPTPA  84
           ARL VADV+AEAR RIGEE+P PA
Sbjct  61  ARLTVADVVAEARGRIGEEAPLPA  84


>gi|325000600|ref|ZP_08121712.1| hypothetical protein PseP1_17612 [Pseudonocardia sp. P1]
Length=88

 Score = 73.9 bits (180),  Expect = 7e-12, Method: Compositional matrix adjust.
 Identities = 38/78 (49%), Positives = 50/78 (65%), Gaps = 0/78 (0%)

Query  6   FLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLKV  65
            + KA   V +GLAG  AY+ +K+ A    +R+ AV+    GLRG R AE  AE ARL  
Sbjct  1   MVGKAAGLVASGLAGAVAYDGVKRVARSGAVREAAVTVTGWGLRGARAAETGAEKARLAT  60

Query  66  ADVMAEARERIGEESPTP  83
           AD+++EAR RIGEE+P P
Sbjct  61  ADIVSEARGRIGEEAPAP  78


>gi|333919412|ref|YP_004492993.1| hypothetical protein AS9A_1744 [Amycolicicoccus subflavus DQS3-9A1]
 gi|333481633|gb|AEF40193.1| hypothetical protein AS9A_1744 [Amycolicicoccus subflavus DQS3-9A1]
Length=94

 Score = 73.6 bits (179),  Expect = 9e-12, Method: Compositional matrix adjust.
 Identities = 49/94 (53%), Positives = 60/94 (64%), Gaps = 1/94 (1%)

Query  1   MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           M   V L KA  TV+TG+ GV AY   +  A K P R+ AVSA ALG++G RKAEE AE+
Sbjct  1   MIHGVLLGKALGTVVTGVVGVAAYNGARWVAKKTPTREIAVSATALGIKGARKAEEGAEN  60

Query  61  ARLKVADVMAEARERIGEESPTPAISDL-HDHDH  93
            RL  AD++AEAR R+GEE+P P      H H H
Sbjct  61  VRLTAADIVAEARGRVGEEAPPPPSHPAGHGHAH  94


>gi|296164642|ref|ZP_06847208.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295899950|gb|EFG79390.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=90

 Score = 72.8 bits (177),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 45/79 (57%), Positives = 53/79 (68%), Gaps = 8/79 (10%)

Query  6   FLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEE----AAESA  61
           F+AKA  TV+TG+ GV AYE L    AKAP R+  V A A G+R  R+AE     +AE A
Sbjct  4   FVAKAMPTVMTGVVGVAAYEAL----AKAPWRKATVVATAWGIRVAREAERKAGRSAEQA  59

Query  62  RLKVADVMAEARERIGEES  80
           RL VADVMAEARER G E+
Sbjct  60  RLTVADVMAEARERAGSEA  78


>gi|258653982|ref|YP_003203138.1| hypothetical protein Namu_3853 [Nakamurella multipartita DSM 
44233]
 gi|258557207|gb|ACV80149.1| hypothetical protein Namu_3853 [Nakamurella multipartita DSM 
44233]
Length=94

 Score = 64.3 bits (155),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 40/87 (46%), Positives = 56/87 (65%), Gaps = 1/87 (1%)

Query  8   AKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAESARLKVAD  67
           A+A   +I+G+AG    + LK+ +    L Q AV+  AL LRG R+ E  AE+ RL   D
Sbjct  8   ARAAGMLISGVAGAIVVDRLKQRSTGRGLNQAAVAVTALALRGKRRVEAGAENLRLGAGD  67

Query  68  VMAEARERIGEESPTPAIS-DLHDHDH  93
           V+A+ARE+IGE++P PA S   H+HDH
Sbjct  68  VVAQAREKIGEQAPPPAQSAQPHEHDH  94


>gi|296165052|ref|ZP_06847606.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295899584|gb|EFG79036.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=139

 Score = 61.2 bits (147),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 61/98 (63%), Gaps = 9/98 (9%)

Query  1    MAIQVFLAKATTTVITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
            MA   FL KA  TV+TG+ GV AYE ++ A AK PLR   V+  A G+R  R+A+  AE+
Sbjct  42   MAWHGFLMKAAPTVVTGVVGVAAYEAVRTAVAKVPLRTATVAVTAWGIRAAREAQRTAET  101

Query  61   A----RLKVADVMAEARERIGEESPTPAI----SDLHD  90
                 RL VADV+AEARER GE++  PAI     D HD
Sbjct  102  NTEQIRLTVADVVAEARERAGEDT-EPAIVTSPGDGHD  138


>gi|183984843|ref|YP_001853134.1| hypothetical protein MMAR_4875 [Mycobacterium marinum M]
 gi|183178169|gb|ACC43279.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=102

 Score = 48.1 bits (113),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 32/66 (49%), Positives = 38/66 (58%), Gaps = 9/66 (13%)

Query  24  YEILKKAAAKAPLRQTAVSAAALGLRGTR----KAEEAAESARLKVADVMAEARERIGEE  79
           YE L    AKAP R   V+A   GLR  R    K ++A E  RL  ADV+AEA ER+G E
Sbjct  25  YEAL----AKAPWRSATVTATVWGLRTARTTERKTKQATERVRLAAADVLAEAVERVGAE  80

Query  80  -SPTPA  84
            +P PA
Sbjct  81  VAPPPA  86


>gi|152964259|ref|YP_001360043.1| hypothetical protein Krad_0289 [Kineococcus radiotolerans SRS30216]
 gi|151358776|gb|ABS01779.1| hypothetical protein Krad_0289 [Kineococcus radiotolerans SRS30216]
Length=102

 Score = 47.4 bits (111),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 23/59 (39%), Positives = 35/59 (60%), Gaps = 1/59 (1%)

Query  36   LRQTAVSAAALGLRGTRKAEEAAESARLKVADVMAEARERIGEESPTPAISDL-HDHDH  93
            LR+ AV+ A  G++ +R AE   E  RL   D++A+A + +GE+ P P      HDH+H
Sbjct  44   LRRLAVNGAKAGIKASRAAETGVERLRLGTGDIVAQAYDELGEQVPVPPTPQAGHDHEH  102


>gi|296164386|ref|ZP_06846962.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295900266|gb|EFG79696.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=103

 Score = 45.1 bits (105),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 25/48 (53%), Positives = 32/48 (67%), Gaps = 4/48 (8%)

Query  35  PLRQTAVSAAALGLRGTR----KAEEAAESARLKVADVMAEARERIGE  78
           P R+  V A A+GL+ TR    K ++AAE ARL  ADV AEA +R+GE
Sbjct  33  PWRKVTVGATAVGLQATRTTARKTKQAAEKARLATADVFAEAADRLGE  80


>gi|118616275|ref|YP_904607.1| hypothetical protein MUL_0424 [Mycobacterium ulcerans Agy99]
 gi|118568385|gb|ABL03136.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=102

 Score = 43.9 bits (102),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 32/68 (48%), Positives = 37/68 (55%), Gaps = 8/68 (11%)

Query  24  YEILKKAAAKAPLRQTAVSAAALGLRGTRKA----EEAAESARLKVADVMAEARERIGEE  79
           YE L    AKAP R   V+A A GLR  R      ++A E  RL  ADV+AEA ER+G E
Sbjct  25  YEAL----AKAPWRSATVTATAWGLRTARTTERRTKQATERVRLAAADVLAEAVERVGAE  80

Query  80  SPTPAISD  87
              PA  D
Sbjct  81  VAPPAAKD  88


>gi|289749496|ref|ZP_06508874.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289690083|gb|EFD57512.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=54

 Score = 37.7 bits (86),  Expect = 0.62, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 27/47 (58%), Gaps = 4/47 (8%)

Query  14  VITGLAGVTAYEILKKAAAKAPLRQTAVSAAALGLRGTRKAEEAAES  60
           ++TG  GV AYE L+K   KAPLR   VS      RG R+A  +A S
Sbjct  1   MVTGAVGVAAYEALRKMVVKAPLRAATVSVD----RGARRARLSANS  43



Lambda     K      H
   0.313    0.124    0.325 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 127811470620


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40