BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3277
Length=272
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610413|ref|NP_217794.1| transmembrane protein [Mycobacteriu... 554 5e-156
gi|308406110|ref|ZP_07669510.1| conserved membrane protein [Myco... 553 7e-156
gi|31794457|ref|NP_856950.1| transmembrane protein [Mycobacteriu... 552 2e-155
gi|340628259|ref|YP_004746711.1| hypothetical protein MCAN_33001... 543 1e-152
gi|15842867|ref|NP_337904.1| hypothetical protein MT3377 [Mycoba... 521 3e-146
gi|294993782|ref|ZP_06799473.1| hypothetical protein Mtub2_04526... 454 6e-126
gi|240171615|ref|ZP_04750274.1| hypothetical protein MkanA1_2003... 413 2e-113
gi|118618096|ref|YP_906428.1| hypothetical protein MUL_2629 [Myc... 406 2e-111
gi|254819511|ref|ZP_05224512.1| hypothetical protein MintA_06279... 405 4e-111
gi|41409493|ref|NP_962329.1| hypothetical protein MAP3395 [Mycob... 402 2e-110
gi|342861490|ref|ZP_08718137.1| hypothetical protein MCOL_21496 ... 399 3e-109
gi|15827311|ref|NP_301574.1| hypothetical protein ML0734 [Mycoba... 397 8e-109
gi|296168924|ref|ZP_06850593.1| GtrA family protein [Mycobacteri... 395 5e-108
gi|183981281|ref|YP_001849572.1| hypothetical protein MMAR_1259 ... 384 9e-105
gi|118469379|ref|YP_886189.1| transmembrane protein [Mycobacteri... 357 1e-96
gi|120402713|ref|YP_952542.1| GtrA family protein [Mycobacterium... 352 3e-95
gi|108798268|ref|YP_638465.1| GtrA-like protein [Mycobacterium s... 348 5e-94
gi|126433935|ref|YP_001069626.1| GtrA family protein [Mycobacter... 348 5e-94
gi|315445622|ref|YP_004078501.1| hypothetical protein Mspyr1_408... 342 3e-92
gi|145225326|ref|YP_001136004.1| GtrA family protein [Mycobacter... 340 1e-91
gi|333991674|ref|YP_004524288.1| transmembrane protein [Mycobact... 328 4e-88
gi|226305624|ref|YP_002765584.1| hypothetical protein RER_21370 ... 248 8e-64
gi|54022966|ref|YP_117208.1| hypothetical protein nfa9990 [Nocar... 243 3e-62
gi|333921484|ref|YP_004495065.1| hypothetical protein AS9A_3827 ... 242 4e-62
gi|229489357|ref|ZP_04383220.1| GtrA family protein [Rhodococcus... 242 5e-62
gi|271965217|ref|YP_003339413.1| membrane protein [Streptosporan... 223 3e-56
gi|226365771|ref|YP_002783554.1| hypothetical protein ROP_63620 ... 221 8e-56
gi|111023261|ref|YP_706233.1| hypothetical protein RHA1_ro06298 ... 221 1e-55
gi|312140717|ref|YP_004008053.1| gtra-like protein [Rhodococcus ... 213 2e-53
gi|134102922|ref|YP_001108583.1| hypothetical protein SACE_6489 ... 211 1e-52
gi|262201787|ref|YP_003272995.1| GtrA family protein [Gordonia b... 205 7e-51
gi|324997840|ref|ZP_08118952.1| hypothetical protein PseP1_03704... 202 5e-50
gi|296138777|ref|YP_003646020.1| GtrA family protein [Tsukamurel... 202 5e-50
gi|256380365|ref|YP_003104025.1| GtrA family protein [Actinosynn... 201 7e-50
gi|257054666|ref|YP_003132498.1| hypothetical protein Svir_06000... 199 5e-49
gi|300782915|ref|YP_003763206.1| GtrA-like protein [Amycolatopsi... 199 5e-49
gi|343927999|ref|ZP_08767464.1| hypothetical protein GOALK_100_0... 197 1e-48
gi|331698990|ref|YP_004335229.1| GtrA family protein [Pseudonoca... 193 2e-47
gi|302524274|ref|ZP_07276616.1| transmembrane protein [Streptomy... 193 2e-47
gi|326382021|ref|ZP_08203714.1| GtrA family protein [Gordonia ne... 190 2e-46
gi|257054572|ref|YP_003132404.1| hypothetical protein Svir_05020... 181 1e-43
gi|226308571|ref|YP_002768531.1| hypothetical protein RER_50840 ... 179 4e-43
gi|317509328|ref|ZP_07966948.1| GtrA protein [Segniliparus rugos... 176 3e-42
gi|296395350|ref|YP_003660234.1| GtrA family protein [Segnilipar... 172 4e-41
gi|302524275|ref|ZP_07276617.1| transmembrane protein [Streptomy... 172 4e-41
gi|54025664|ref|YP_119906.1| hypothetical protein nfa36940 [Noca... 171 8e-41
gi|300782916|ref|YP_003763207.1| GtrA-like protein [Amycolatopsi... 165 7e-39
gi|258654343|ref|YP_003203499.1| GtrA family protein [Nakamurell... 164 2e-38
gi|311898338|dbj|BAJ30746.1| hypothetical protein KSE_49680 [Kit... 130 2e-28
gi|84498097|ref|ZP_00996894.1| probable conserved transmembrane ... 107 2e-21
>gi|15610413|ref|NP_217794.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|148663140|ref|YP_001284663.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra]
gi|148824478|ref|YP_001289233.1| transmembrane protein [Mycobacterium tuberculosis F11]
46 more sequence titles
Length=272
Score = 554 bits (1428), Expect = 5e-156, Method: Compositional matrix adjust.
Identities = 272/272 (100%), Positives = 272/272 (100%), Gaps = 0/272 (0%)
Query 1 MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARL 60
MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARL
Sbjct 1 MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARL 60
Query 61 PGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASY 120
PGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASY
Sbjct 61 PGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASY 120
Query 121 VLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIA 180
VLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIA
Sbjct 121 VLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIA 180
Query 181 DFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE 240
DFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE
Sbjct 181 DFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE 240
Query 241 DGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
DGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS
Sbjct 241 DGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
>gi|308406110|ref|ZP_07669510.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|308364506|gb|EFP53357.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
Length=289
Score = 553 bits (1426), Expect = 7e-156, Method: Compositional matrix adjust.
Identities = 272/272 (100%), Positives = 272/272 (100%), Gaps = 0/272 (0%)
Query 1 MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARL 60
MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARL
Sbjct 18 MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARL 77
Query 61 PGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASY 120
PGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASY
Sbjct 78 PGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASY 137
Query 121 VLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIA 180
VLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIA
Sbjct 138 VLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIA 197
Query 181 DFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE 240
DFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE
Sbjct 198 DFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE 257
Query 241 DGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
DGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS
Sbjct 258 DGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 289
>gi|31794457|ref|NP_856950.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121639166|ref|YP_979390.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224991659|ref|YP_002646348.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|31620053|emb|CAD95397.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis
AF2122/97]
gi|121494814|emb|CAL73295.1| Probable conserved transmembrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224774774|dbj|BAH27580.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341603205|emb|CCC65883.1| probable conserved transmembrane protein [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=272
Score = 552 bits (1423), Expect = 2e-155, Method: Compositional matrix adjust.
Identities = 271/271 (100%), Positives = 271/271 (100%), Gaps = 0/271 (0%)
Query 1 MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARL 60
MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARL
Sbjct 1 MNEVTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARL 60
Query 61 PGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASY 120
PGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASY
Sbjct 61 PGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASY 120
Query 121 VLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIA 180
VLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIA
Sbjct 121 VLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIA 180
Query 181 DFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE 240
DFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE
Sbjct 181 DFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFE 240
Query 241 DGNVTLLRAWRNRANRFAQLGDSSEPRVSKT 271
DGNVTLLRAWRNRANRFAQLGDSSEPRVSKT
Sbjct 241 DGNVTLLRAWRNRANRFAQLGDSSEPRVSKT 271
>gi|340628259|ref|YP_004746711.1| hypothetical protein MCAN_33001 [Mycobacterium canettii CIPT
140010059]
gi|340006449|emb|CCC45631.1| putative conserved transmembrane protein [Mycobacterium canettii
CIPT 140010059]
Length=269
Score = 543 bits (1398), Expect = 1e-152, Method: Compositional matrix adjust.
Identities = 267/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%)
Query 4 VTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARLPGV 63
+TAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHS VVSFADATIARLPGV
Sbjct 1 MTAGVRELATAIMVSRHLTGVLAGHGSQTVTYHFASILCSSVHSRVVSFADATIARLPGV 60
Query 64 VQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLN 123
VQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLN
Sbjct 61 VQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLN 120
Query 124 REWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIADFI 183
REWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIADFI
Sbjct 121 REWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIADFI 180
Query 184 SAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFEDGN 243
SAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFEDGN
Sbjct 181 SAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFEDGN 240
Query 244 VTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
VTLLRAWRNRANRFAQLGDSSEPRVSKTS
Sbjct 241 VTLLRAWRNRANRFAQLGDSSEPRVSKTS 269
>gi|15842867|ref|NP_337904.1| hypothetical protein MT3377 [Mycobacterium tuberculosis CDC1551]
gi|298526753|ref|ZP_07014162.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|13883198|gb|AAK47718.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|298496547|gb|EFI31841.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=256
Score = 521 bits (1343), Expect = 3e-146, Method: Compositional matrix adjust.
Identities = 255/256 (99%), Positives = 256/256 (100%), Gaps = 0/256 (0%)
Query 17 VSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARLPGVVQPYAQRHHELIK 76
+SRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARLPGVVQPYAQRHHELIK
Sbjct 1 MSRHLTGVLAGHGSQTVTYHFASILCSSVHSLVVSFADATIARLPGVVQPYAQRHHELIK 60
Query 77 FAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLNREWSFRDRGGRER 136
FAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLNREWSFRDRGGRER
Sbjct 61 FAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLNREWSFRDRGGRER 120
Query 137 HHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIADFISAYIIGNLLQMAF 196
HHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIADFISAYIIGNLLQMAF
Sbjct 121 HHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIADFISAYIIGNLLQMAF 180
Query 197 RFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFEDGNVTLLRAWRNRANR 256
RFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFEDGNVTLLRAWRNRANR
Sbjct 181 RFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFEDGNVTLLRAWRNRANR 240
Query 257 FAQLGDSSEPRVSKTS 272
FAQLGDSSEPRVSKTS
Sbjct 241 FAQLGDSSEPRVSKTS 256
>gi|294993782|ref|ZP_06799473.1| hypothetical protein Mtub2_04526 [Mycobacterium tuberculosis
210]
gi|308232406|ref|ZP_07415943.2| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308370214|ref|ZP_07420665.2| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
16 more sequence titles
Length=223
Score = 454 bits (1168), Expect = 6e-126, Method: Compositional matrix adjust.
Identities = 222/223 (99%), Positives = 223/223 (100%), Gaps = 0/223 (0%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV
Sbjct 1 MSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV
Sbjct 61 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE
Sbjct 121 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 180
Query 230 VFEDVLEGGFEDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
VFEDVLEGGFEDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS
Sbjct 181 VFEDVLEGGFEDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 223
>gi|240171615|ref|ZP_04750274.1| hypothetical protein MkanA1_20033 [Mycobacterium kansasii ATCC
12478]
Length=222
Score = 413 bits (1061), Expect = 2e-113, Method: Compositional matrix adjust.
Identities = 205/226 (91%), Positives = 212/226 (94%), Gaps = 7/226 (3%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIID+AIFYTLKLT+LEPKPVTAKV
Sbjct 1 MSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDSAIFYTLKLTILEPKPVTAKV 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLW SSY+LQLRV
Sbjct 61 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWVSSYVLQLRV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
PTVSLT+ENIADF+SAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE
Sbjct 121 PTVSLTVENIADFVSAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 180
Query 230 VFEDVLEGGFEDGNVTLLRAW---RNRANRFAQLGDSSEPRVSKTS 272
V ED LEG GNVTLLRAW R+R R AQLG SSEPRVSKTS
Sbjct 181 VLEDTLEG----GNVTLLRAWRSKRSRTGRLAQLGASSEPRVSKTS 222
>gi|118618096|ref|YP_906428.1| hypothetical protein MUL_2629 [Mycobacterium ulcerans Agy99]
gi|118570206|gb|ABL04957.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=227
Score = 406 bits (1044), Expect = 2e-111, Method: Compositional matrix adjust.
Identities = 204/231 (89%), Positives = 214/231 (93%), Gaps = 12/231 (5%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SFADATIARLP VVQP+AQRHHELIKFAIVGGTTFIID+AIFYTLKLT+LEPKPVTAKV
Sbjct 1 MSFADATIARLPRVVQPFAQRHHELIKFAIVGGTTFIIDSAIFYTLKLTILEPKPVTAKV 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSY+LQLRV
Sbjct 61 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYVLQLRV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
P VSLT+EN+ADF+SAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE
Sbjct 121 PMVSLTVENLADFVSAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 180
Query 230 VFEDVLEGGFEDGNVTLLRAWRN---RANR-----FAQLGDSSEPRVSKTS 272
VFED +EG GNVTLLR+WRN RANR AQLG SSEPRVSKTS
Sbjct 181 VFEDEIEG----GNVTLLRSWRNKSARANRSDARSAAQLGASSEPRVSKTS 227
>gi|254819511|ref|ZP_05224512.1| hypothetical protein MintA_06279 [Mycobacterium intracellulare
ATCC 13950]
Length=219
Score = 405 bits (1040), Expect = 4e-111, Method: Compositional matrix adjust.
Identities = 197/223 (89%), Positives = 210/223 (95%), Gaps = 4/223 (1%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SFA+ATIARLP V+QPY RHHELIKFAIVGGTTF+ID+AIFYTLKLT+LEPKPVTAKV
Sbjct 1 MSFAEATIARLPRVLQPYLLRHHELIKFAIVGGTTFVIDSAIFYTLKLTILEPKPVTAKV 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAGIVAVIASYVLNREWSFR+RGGRERHHEALLFFAFSGVGVLLSMAPLWFSSY+LQLRV
Sbjct 61 IAGIVAVIASYVLNREWSFRNRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYVLQLRV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
PTVSL +EN+ADFISAYIIGNLLQMAFRFWAFRRWVFPD+FAR PDKALESALTAGGIAE
Sbjct 121 PTVSLAVENLADFISAYIIGNLLQMAFRFWAFRRWVFPDQFARTPDKALESALTAGGIAE 180
Query 230 VFEDVLEGGFEDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
+FED +EG GNVTLLRAWRNRA R QLGDSSEPRVSKTS
Sbjct 181 IFEDEIEG----GNVTLLRAWRNRAGRLGQLGDSSEPRVSKTS 219
>gi|41409493|ref|NP_962329.1| hypothetical protein MAP3395 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118464004|ref|YP_883387.1| hypothetical protein MAV_4247 [Mycobacterium avium 104]
gi|254776681|ref|ZP_05218197.1| hypothetical protein MaviaA2_18721 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41398324|gb|AAS05945.1| hypothetical protein MAP_3395 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118165291|gb|ABK66188.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336459641|gb|EGO38576.1| putative membrane protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=221
Score = 402 bits (1034), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 195/223 (88%), Positives = 210/223 (95%), Gaps = 2/223 (0%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SFA+ATIARLP ++QPY RHHELIKFAIVGGTTF+ID+AIFYTLKLT+LEPKPVTAKV
Sbjct 1 MSFAEATIARLPRLLQPYLLRHHELIKFAIVGGTTFVIDSAIFYTLKLTILEPKPVTAKV 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAGIVAVIASYVLNREWSFR+RGGRERHHEALLFFAFSGVGVLLSMAPLWFSSY+LQLR
Sbjct 61 IAGIVAVIASYVLNREWSFRNRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYVLQLRQ 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
PTVSLT+EN+ADFISAYIIGNLLQMAFRFWAFRRWVFPD+FAR+PDKALESALTAGGIAE
Sbjct 121 PTVSLTVENVADFISAYIIGNLLQMAFRFWAFRRWVFPDQFARDPDKALESALTAGGIAE 180
Query 230 VFEDVLEGGFEDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
+FED E + GNVTLLRAWRNRA R QLGDSSEPRVSKTS
Sbjct 181 IFEDAFED--DGGNVTLLRAWRNRAGRLTQLGDSSEPRVSKTS 221
>gi|342861490|ref|ZP_08718137.1| hypothetical protein MCOL_21496 [Mycobacterium colombiense CECT
3035]
gi|342130979|gb|EGT84268.1| hypothetical protein MCOL_21496 [Mycobacterium colombiense CECT
3035]
Length=219
Score = 399 bits (1025), Expect = 3e-109, Method: Compositional matrix adjust.
Identities = 193/223 (87%), Positives = 210/223 (95%), Gaps = 4/223 (1%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SFA+ATIARLP V+QPY RHHELIKFAIVGGTTF+ID+AIFYTLKLT+LEPKPVTAKV
Sbjct 1 MSFAEATIARLPRVMQPYLLRHHELIKFAIVGGTTFVIDSAIFYTLKLTILEPKPVTAKV 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAGIVAVIASYVLNREWSFR+RGGRERHHEALLFFAFSGVGVLLSMAPLWFSSY+LQLR
Sbjct 61 IAGIVAVIASYVLNREWSFRNRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYVLQLRE 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
PTVSL +EN+ADFISAYIIGNLLQMAFRFWAFRRWVFPD+FAR+P+KALESALTAGGIAE
Sbjct 121 PTVSLAVENVADFISAYIIGNLLQMAFRFWAFRRWVFPDQFARDPEKALESALTAGGIAE 180
Query 230 VFEDVLEGGFEDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
+FED + E+ NVTLLRAWRNRA+R QLGDSSEPRVSKTS
Sbjct 181 IFEDEI----ENDNVTLLRAWRNRASRLTQLGDSSEPRVSKTS 219
>gi|15827311|ref|NP_301574.1| hypothetical protein ML0734 [Mycobacterium leprae TN]
gi|221229789|ref|YP_002503205.1| hypothetical protein MLBr_00734 [Mycobacterium leprae Br4923]
gi|466840|gb|AAA85916.1| B1308_C1_121 [Mycobacterium leprae]
gi|13092860|emb|CAC30243.1| putative membrane protein [Mycobacterium leprae]
gi|219932896|emb|CAR70828.1| putative membrane protein [Mycobacterium leprae Br4923]
Length=228
Score = 397 bits (1021), Expect = 8e-109, Method: Compositional matrix adjust.
Identities = 192/228 (85%), Positives = 209/228 (92%), Gaps = 5/228 (2%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SF DATI RLP V+QPYAQR+HELIKFAIVGGTTFIID+AIFYTLKLT+LEPKPVTAKV
Sbjct 1 MSFPDATITRLPTVLQPYAQRYHELIKFAIVGGTTFIIDSAIFYTLKLTILEPKPVTAKV 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
+AGIVAVIASYVLNREWSFRDRGGRERH+EALLFFAFSG+GVLLSMAPLWFSSY+LQLR
Sbjct 61 VAGIVAVIASYVLNREWSFRDRGGRERHNEALLFFAFSGIGVLLSMAPLWFSSYVLQLRA 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
PTVSLT+EN+ADF+SAYIIGNLLQMAFRFWAFRRWVFPD FARNP+K LESALTAGGIAE
Sbjct 121 PTVSLTVENLADFLSAYIIGNLLQMAFRFWAFRRWVFPDAFARNPEKTLESALTAGGIAE 180
Query 230 VFEDVLEGGFEDGNVTLLRAWRNRANRF-----AQLGDSSEPRVSKTS 272
VFED ++G FED LLRAWRNR+ R +QLGDSSEPRVSKTS
Sbjct 181 VFEDAIDGVFEDFGDALLRAWRNRSRRLDLSPASQLGDSSEPRVSKTS 228
>gi|296168924|ref|ZP_06850593.1| GtrA family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896393|gb|EFG76046.1| GtrA family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=219
Score = 395 bits (1014), Expect = 5e-108, Method: Compositional matrix adjust.
Identities = 191/223 (86%), Positives = 206/223 (93%), Gaps = 4/223 (1%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+ FA+A I R+PG +QPY QRHHELIKFAIVGGTTF+ID+AIFYTLKLT+L+ KPVTAKV
Sbjct 1 MPFAEAAIERMPGFIQPYLQRHHELIKFAIVGGTTFVIDSAIFYTLKLTILDSKPVTAKV 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSY+LQLR
Sbjct 61 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYVLQLRE 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
P VSLT+ENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNP+KALESALTAGGIAE
Sbjct 121 PMVSLTVENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPEKALESALTAGGIAE 180
Query 230 VFEDVLEGGFEDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
+ ED +EG GNVT LRAWRNRA+R QLGDSS+PRVSKTS
Sbjct 181 MLEDEIEG----GNVTPLRAWRNRASRLTQLGDSSDPRVSKTS 219
>gi|183981281|ref|YP_001849572.1| hypothetical protein MMAR_1259 [Mycobacterium marinum M]
gi|183174607|gb|ACC39717.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=214
Score = 384 bits (986), Expect = 9e-105, Method: Compositional matrix adjust.
Identities = 192/218 (89%), Positives = 202/218 (93%), Gaps = 12/218 (5%)
Query 63 VVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVL 122
+VQP+AQRHHELIKFAIVGGTTFIID+AIFYTLKLT+LEPKPVTAKVIAGIVAVIASYVL
Sbjct 1 MVQPFAQRHHELIKFAIVGGTTFIIDSAIFYTLKLTILEPKPVTAKVIAGIVAVIASYVL 60
Query 123 NREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIADF 182
NREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSY+LQLRVP VSLT+EN+ADF
Sbjct 61 NREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYVLQLRVPMVSLTVENLADF 120
Query 183 ISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDVLEGGFEDG 242
+SAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFED +EG G
Sbjct 121 VSAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAEVFEDEIEG----G 176
Query 243 NVTLLRAWRN---RANR-----FAQLGDSSEPRVSKTS 272
NVTLLR+WRN RANR AQLG SSEPRVSKTS
Sbjct 177 NVTLLRSWRNKSARANRSDARSAAQLGASSEPRVSKTS 214
>gi|118469379|ref|YP_886189.1| transmembrane protein [Mycobacterium smegmatis str. MC2 155]
gi|118170666|gb|ABK71562.1| probable conserved transmembrane protein [Mycobacterium smegmatis
str. MC2 155]
Length=223
Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 179/224 (80%), Positives = 193/224 (87%), Gaps = 2/224 (0%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SFADATIARLP ++P+A+RHHELIKFAIVG TTF+ID+AIFYTLKLTVLEPKPVTAK+
Sbjct 1 MSFADATIARLPRFIRPFAERHHELIKFAIVGATTFVIDSAIFYTLKLTVLEPKPVTAKI 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAGIVAVIASY+LNREWSFRDRGGRERHHEA LFFA SGVGVLLSMAPLW SSY+L LRV
Sbjct 61 IAGIVAVIASYILNREWSFRDRGGRERHHEAFLFFAVSGVGVLLSMAPLWISSYVLMLRV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
P VSLT ENIADFISAYIIGNLLQMAFRFWAFRR+VFPDEFARNPDKALES LT GG+AE
Sbjct 121 PEVSLTTENIADFISAYIIGNLLQMAFRFWAFRRFVFPDEFARNPDKALESTLTGGGLAE 180
Query 230 VFEDVLEGGF-EDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
ED E D VT +R R R QLGDSS+PRVSKTS
Sbjct 181 ALEDEYEVSHGPDSVVTPMRRSRGRGAP-PQLGDSSDPRVSKTS 223
>gi|120402713|ref|YP_952542.1| GtrA family protein [Mycobacterium vanbaalenii PYR-1]
gi|119955531|gb|ABM12536.1| GtrA family protein [Mycobacterium vanbaalenii PYR-1]
Length=240
Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 178/231 (78%), Positives = 196/231 (85%), Gaps = 4/231 (1%)
Query 44 SVHSLVVSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPK 103
SV+ L+VSFADATI RLPG ++PYA+RHHELIKFAIVG TTF+ID+AIF+TLKLT+LEPK
Sbjct 12 SVNWLLVSFADATIRRLPGPIRPYAERHHELIKFAIVGATTFVIDSAIFFTLKLTILEPK 71
Query 104 PVTAKVIAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSY 163
PVTAK+IAGIVAVIASY+LNREWSFRDRGGRERHHEALLFF SGVGVLLSMAPLW SSY
Sbjct 72 PVTAKIIAGIVAVIASYILNREWSFRDRGGRERHHEALLFFGVSGVGVLLSMAPLWVSSY 131
Query 164 ILQLRVPTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALT 223
+L LRVP VSL EN+ADFISAYIIGNLLQMAFRFWAFRR+VFPDEFARNP+KALES LT
Sbjct 132 VLMLRVPMVSLAAENVADFISAYIIGNLLQMAFRFWAFRRFVFPDEFARNPEKALESTLT 191
Query 224 AGGIAEVFEDVLEGGFEDG--NVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
GG AEV ED E G NVT +R R R + + D SEPRVSKTS
Sbjct 192 GGGFAEVLEDEYELRHPSGPDNVTPMRPSRRRWKQ--RPSDPSEPRVSKTS 240
>gi|108798268|ref|YP_638465.1| GtrA-like protein [Mycobacterium sp. MCS]
gi|119867364|ref|YP_937316.1| GtrA family protein [Mycobacterium sp. KMS]
gi|108768687|gb|ABG07409.1| GtrA-like protein [Mycobacterium sp. MCS]
gi|119693453|gb|ABL90526.1| GtrA family protein [Mycobacterium sp. KMS]
Length=229
Score = 348 bits (893), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 176/230 (77%), Positives = 196/230 (86%), Gaps = 8/230 (3%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SFADATI RLPG ++PYA++HHELIKFAIVG TTF+ID+AIF+TLKLT+LEPKPVTAK+
Sbjct 1 MSFADATIKRLPGPIRPYAEQHHELIKFAIVGATTFVIDSAIFFTLKLTILEPKPVTAKI 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAGIVAVIASY+LNREWSFRDRGGRERHHEALLFF FSGVGVLLSM PL+FSSY+L LRV
Sbjct 61 IAGIVAVIASYILNREWSFRDRGGRERHHEALLFFGFSGVGVLLSMLPLYFSSYVLGLRV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
P VSLT+ENIADF+SAYI+GNLLQMAFRFWAFRRWVFP+EF RNPDKALES LT GGIAE
Sbjct 121 PEVSLTIENIADFVSAYILGNLLQMAFRFWAFRRWVFPEEFGRNPDKALESTLTIGGIAE 180
Query 230 VFEDVLE-------GGFEDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
ED E +G VT LR R R+ QLGDSS+PRVSKTS
Sbjct 181 AMEDAAEHHTAPHGDAPVEGTVTPLRRSRRRSG-LDQLGDSSDPRVSKTS 229
>gi|126433935|ref|YP_001069626.1| GtrA family protein [Mycobacterium sp. JLS]
gi|126233735|gb|ABN97135.1| GtrA family protein [Mycobacterium sp. JLS]
Length=229
Score = 348 bits (893), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 176/230 (77%), Positives = 196/230 (86%), Gaps = 8/230 (3%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SFADATI RLPG ++PYA++HHELIKFAIVG TTF+ID+AIF+TLKLT+LEPKPVTAK+
Sbjct 1 MSFADATIKRLPGPIRPYAEQHHELIKFAIVGATTFVIDSAIFFTLKLTILEPKPVTAKI 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAGIVAVIASY+LNREWSFRDRGGRERHHEALLFF FSGVGVLLSM PL+FSSY+L LRV
Sbjct 61 IAGIVAVIASYILNREWSFRDRGGRERHHEALLFFGFSGVGVLLSMLPLYFSSYVLGLRV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
P VSLT+ENIADF+SAYI+GNLLQMAFRFWAFRRWVFP+EF RNPDKALES LT GGIAE
Sbjct 121 PEVSLTIENIADFVSAYILGNLLQMAFRFWAFRRWVFPEEFGRNPDKALESTLTIGGIAE 180
Query 230 VFEDVLE-------GGFEDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
ED E +G VT LR R R+ QLGDSS+PRVSKTS
Sbjct 181 AMEDAAEHHTAPHGDAPGEGTVTPLRRSRRRSG-LDQLGDSSDPRVSKTS 229
>gi|315445622|ref|YP_004078501.1| hypothetical protein Mspyr1_40800 [Mycobacterium sp. Spyr1]
gi|315263925|gb|ADU00667.1| predicted membrane protein [Mycobacterium sp. Spyr1]
Length=227
Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/229 (76%), Positives = 193/229 (85%), Gaps = 8/229 (3%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SFADATI RLPG ++PYA+RHHELIKFAIVG TTF+ID+AIF+TLKLT+LEPKPVTAK+
Sbjct 1 MSFADATIRRLPGPIRPYAERHHELIKFAIVGATTFVIDSAIFFTLKLTILEPKPVTAKI 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAGIVAVIASY+LNREWSFRDRGGRERHHEALLFF SGVGVLLSMAPLW SSY+L LRV
Sbjct 61 IAGIVAVIASYILNREWSFRDRGGRERHHEALLFFGVSGVGVLLSMAPLWVSSYVLMLRV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
P VSL ENIADF+SAYIIGNLLQMAFRFWAFRR+VFPDEFARNP+KALESALT GGIAE
Sbjct 121 PMVSLMTENIADFVSAYIIGNLLQMAFRFWAFRRFVFPDEFARNPEKALESALTGGGIAE 180
Query 230 VFED------VLEGGFEDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
ED L+ G + NVT +R +R Q+ D EPRVSKTS
Sbjct 181 ALEDEYELRHPLKSGAKGDNVTPMRG--SRRRSQRQVDDPDEPRVSKTS 227
>gi|145225326|ref|YP_001136004.1| GtrA family protein [Mycobacterium gilvum PYR-GCK]
gi|145217812|gb|ABP47216.1| GtrA family protein [Mycobacterium gilvum PYR-GCK]
Length=227
Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/228 (77%), Positives = 190/228 (84%), Gaps = 6/228 (2%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SFADATI RLPG ++PYA+RHHELIKFAIVG TTF+ID+AIF+TLKLT+LEPKPVTAK+
Sbjct 1 MSFADATIRRLPGPIRPYAERHHELIKFAIVGATTFVIDSAIFFTLKLTILEPKPVTAKI 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAGIVAVIASY+LNREWSFRDRGGRERHHEALLFF SGVGVLLSMAPLW SSY+L LRV
Sbjct 61 IAGIVAVIASYILNREWSFRDRGGRERHHEALLFFGVSGVGVLLSMAPLWVSSYVLMLRV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
P VSL ENIADF+SAYIIGNLLQMAFRFWAFRR+VFPDEFARNP+KALES LT GG+AE
Sbjct 121 PMVSLMTENIADFVSAYIIGNLLQMAFRFWAFRRFVFPDEFARNPEKALESTLTGGGLAE 180
Query 230 VFEDVLE-----GGFEDGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
ED E G GNVT +R R Q DS EPRVSKTS
Sbjct 181 ALEDEYELRHPHGPEPKGNVTPMRM-SRRRRNQRQRNDSDEPRVSKTS 227
>gi|333991674|ref|YP_004524288.1| transmembrane protein [Mycobacterium sp. JDM601]
gi|333487643|gb|AEF37035.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=221
Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 164/226 (73%), Positives = 184/226 (82%), Gaps = 8/226 (3%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SF DATIARLP V++P A+RHHELIKFAIVG TTFIID+A+FYTLKLT+LEPKPVTAKV
Sbjct 1 MSFTDATIARLPRVIRPLAERHHELIKFAIVGATTFIIDSALFYTLKLTILEPKPVTAKV 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
I+GIVAVIASY+LNREWSF+DRGGRERHHEALLFF SGVGVLLSMAPLWFSSY+LQLR
Sbjct 61 ISGIVAVIASYILNREWSFKDRGGRERHHEALLFFGVSGVGVLLSMAPLWFSSYVLQLRA 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAGGIAE 229
P VSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEF R PD AL +++ G + E
Sbjct 121 PMVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFGRTPDSALSASIEDGALVE 180
Query 230 VFEDVLEGGFE---DGNVTLLRAWRNRANRFAQLGDSSEPRVSKTS 272
ED LE E DG+ ++ +R R R D +SKTS
Sbjct 181 ALEDTLEETAESSPDGHAGVVTLFR-RPARHQPAADG----LSKTS 221
>gi|226305624|ref|YP_002765584.1| hypothetical protein RER_21370 [Rhodococcus erythropolis PR4]
gi|226184741|dbj|BAH32845.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length=217
Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 122/181 (68%), Positives = 145/181 (81%), Gaps = 4/181 (2%)
Query 45 VHSLVVSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKP 104
V+S VV F D IAR+P + A RH ELIKFAIVGGTTF+ID+ IFYTLKL++LE KP
Sbjct 8 VNSSVVPFVDGVIARIPQPFRDIALRHSELIKFAIVGGTTFLIDSGIFYTLKLSILESKP 67
Query 105 VTAKVIAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYI 164
+TAK+IAG+VAVIASY+LNREWSF++RGGRE HEA LFF S +GV++S PL+ SSY+
Sbjct 68 ITAKIIAGVVAVIASYILNREWSFKNRGGREPAHEAALFFIISAIGVVISFIPLYISSYV 127
Query 165 LQLRVPTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTA 224
LRVP VSL ENIADFISAY+IGNLLQMAFRFWAFR++VFPDE NP+ LE + T
Sbjct 128 FNLRVPEVSLATENIADFISAYVIGNLLQMAFRFWAFRKFVFPDE---NPEP-LELSDTT 183
Query 225 G 225
G
Sbjct 184 G 184
>gi|54022966|ref|YP_117208.1| hypothetical protein nfa9990 [Nocardia farcinica IFM 10152]
gi|54014474|dbj|BAD55844.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=180
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/159 (73%), Positives = 132/159 (84%), Gaps = 0/159 (0%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+S AD ++ LP ++ A RHHELIKFAIVG TTF+ID+ IFY LK TVL KPVTAK+
Sbjct 1 MSIADDAVSVLPEPLREIAYRHHELIKFAIVGATTFVIDSGIFYALKWTVLTEKPVTAKI 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
I+G+VAVIASYVLNREWSF++RGGRERHHEALLFF SG+GV LS PLW SSY+ LR
Sbjct 61 ISGVVAVIASYVLNREWSFKNRGGRERHHEALLFFVVSGIGVALSNIPLWISSYVFDLRQ 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPD 208
P VS T+ENIADF+SA+IIGNLLQMAFRFWA RRWVFPD
Sbjct 121 PAVSFTVENIADFVSAFIIGNLLQMAFRFWAMRRWVFPD 159
>gi|333921484|ref|YP_004495065.1| hypothetical protein AS9A_3827 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483705|gb|AEF42265.1| putative conserved transmembrane protein [Amycolicicoccus subflavus
DQS3-9A1]
Length=185
Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/169 (68%), Positives = 136/169 (81%), Gaps = 0/169 (0%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+S AD I+R+P + +A +H E IKFAIVGGTTFI D AIFYTLKLT+L PVTAK+
Sbjct 1 MSLADVVISRIPHPFRGFAIQHREFIKFAIVGGTTFIFDMAIFYTLKLTILADNPVTAKI 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAG++AVI SYVLNREWSF++RGGRERHHEA LFF SG+GV+++ PLW SSY+L+LRV
Sbjct 61 IAGVMAVILSYVLNREWSFKNRGGRERHHEAFLFFVVSGIGVVIAFIPLWVSSYVLELRV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKAL 218
P VSL ENIADFISAY+IGN+LQM FRFWA RR+VFPDEF A+
Sbjct 121 PNVSLATENIADFISAYLIGNILQMLFRFWAMRRYVFPDEFVATAGSAV 169
>gi|229489357|ref|ZP_04383220.1| GtrA family protein [Rhodococcus erythropolis SK121]
gi|229323454|gb|EEN89212.1| GtrA family protein [Rhodococcus erythropolis SK121]
Length=199
Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/176 (68%), Positives = 141/176 (81%), Gaps = 4/176 (2%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+ F D IAR+P + A RH ELIKFAIVGGTTF+ID+ IFYTLKL++LE KP+TAK+
Sbjct 1 MPFVDGVIARIPQPFRDIALRHSELIKFAIVGGTTFLIDSGIFYTLKLSILESKPITAKI 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IAG+VAVIASY+LNREWSF++RGGRE HEA LFF S +GV++S PL+ SSY+ LRV
Sbjct 61 IAGVVAVIASYILNREWSFKNRGGREPAHEAALFFIISAIGVVISFIPLYISSYVFNLRV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAG 225
P VSL ENIADFISAY+IGNLLQMAFRFWAFR++VFPDE NP+ LE + T G
Sbjct 121 PEVSLAAENIADFISAYVIGNLLQMAFRFWAFRKFVFPDE---NPEP-LELSDTTG 172
>gi|271965217|ref|YP_003339413.1| membrane protein [Streptosporangium roseum DSM 43021]
gi|270508392|gb|ACZ86670.1| membrane protein-like protein [Streptosporangium roseum DSM 43021]
Length=186
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/161 (65%), Positives = 124/161 (78%), Gaps = 0/161 (0%)
Query 53 ADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAG 112
A+A +ARLPG + A +H EL+KFA+VGG F++D +FY LKLT+LEPKPVTAKVIA
Sbjct 10 ANAVLARLPGPLHALALKHRELLKFAVVGGAAFLVDNTVFYGLKLTILEPKPVTAKVIAV 69
Query 113 IVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTV 172
+VA I SYVLNREWSFR RGGRERHHEA LFF SGVG++LS PLW S Y+ L P V
Sbjct 70 LVATIVSYVLNREWSFRTRGGRERHHEAALFFLVSGVGLVLSSVPLWISRYVFLLETPEV 129
Query 173 SLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARN 213
SL + IADF+SA +IG L+ M FRFWAFR+WVFPDE A +
Sbjct 130 SLVTQEIADFMSAQVIGTLIAMVFRFWAFRKWVFPDEEAHS 170
>gi|226365771|ref|YP_002783554.1| hypothetical protein ROP_63620 [Rhodococcus opacus B4]
gi|226244261|dbj|BAH54609.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=193
Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/179 (61%), Positives = 133/179 (75%), Gaps = 2/179 (1%)
Query 45 VHSLVVSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKP 104
V+S VVSF D +AR+P + A RHHELIKFAIVGGTT + D AIFY+L LT+LE KP
Sbjct 8 VNSSVVSFVDGVLARVPQPFRALALRHHELIKFAIVGGTTMVFDLAIFYSLSLTILEEKP 67
Query 105 VTAKVIAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYI 164
V AKV++GI+A + SY+LNREWSF++RGGRERHHEALLFF SGVGVLL+ APLW ++ +
Sbjct 68 VVAKVLSGILATVLSYILNREWSFKNRGGRERHHEALLFFTISGVGVLLAAAPLWIANNV 127
Query 165 LQLRVPTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFAR--NPDKALESA 221
+R +LT + DF+ YIIGNLLQM FRFWA RR+ FPDE +PD E+A
Sbjct 128 FDIRETQENLTTLVVVDFVLNYIIGNLLQMVFRFWALRRFAFPDENVHLIDPDLVDEAA 186
>gi|111023261|ref|YP_706233.1| hypothetical protein RHA1_ro06298 [Rhodococcus jostii RHA1]
gi|110822791|gb|ABG98075.1| possible membrane protein [Rhodococcus jostii RHA1]
Length=193
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/178 (61%), Positives = 132/178 (75%), Gaps = 2/178 (1%)
Query 45 VHSLVVSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKP 104
V+S VVSF D +AR+P + A RHHELIKFAIVGGTT I D AIFY+L LT+LE KP
Sbjct 8 VNSSVVSFVDGVLARVPQPFRALALRHHELIKFAIVGGTTMIFDLAIFYSLSLTILEEKP 67
Query 105 VTAKVIAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYI 164
V AKV++GI+A + SY+LNREWSF++RGGRERHHEALLFF SG+GVLL+ APLW ++ +
Sbjct 68 VVAKVLSGILATVLSYILNREWSFKNRGGRERHHEALLFFTISGIGVLLAAAPLWIANNV 127
Query 165 LQLRVPTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFAR--NPDKALES 220
+R +LT + DF+ YIIGNLLQM FRFWA RR+ FPDE +PD E+
Sbjct 128 FDIRASQENLTTLVVVDFVLNYIIGNLLQMVFRFWALRRFAFPDENVHIIDPDLVDEA 185
>gi|312140717|ref|YP_004008053.1| gtra-like protein [Rhodococcus equi 103S]
gi|325675644|ref|ZP_08155328.1| GtrA family protein [Rhodococcus equi ATCC 33707]
gi|311890056|emb|CBH49374.1| putative GtrA-like protein [Rhodococcus equi 103S]
gi|325553615|gb|EGD23293.1| GtrA family protein [Rhodococcus equi ATCC 33707]
Length=182
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/160 (62%), Positives = 124/160 (78%), Gaps = 1/160 (0%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+SF DA ++R+P + RHHELIKFAIVGGTT ++D AIFY+L LT+LE KPV AK+
Sbjct 1 MSFVDAAMSRVPQPFRAIVLRHHELIKFAIVGGTTMVVDLAIFYSLSLTILEQKPVVAKI 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
+G+VA I SY+LNREWSF+ RGGRERHHEALLFF SG+GV+++ APLW ++ + +R
Sbjct 61 FSGVVATILSYILNREWSFKHRGGRERHHEALLFFTISGIGVIIAAAPLWIANNVFDIRA 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDE 209
+ S T I DFI YIIGNLLQM FRFW+FRRWVFP+E
Sbjct 121 -SASFTTVVIVDFILNYIIGNLLQMIFRFWSFRRWVFPEE 159
>gi|134102922|ref|YP_001108583.1| hypothetical protein SACE_6489 [Saccharopolyspora erythraea NRRL
2338]
gi|291007992|ref|ZP_06565965.1| hypothetical protein SeryN2_26016 [Saccharopolyspora erythraea
NRRL 2338]
gi|133915545|emb|CAM05658.1| hypothetical protein SACE_6489 [Saccharopolyspora erythraea NRRL
2338]
Length=176
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/170 (61%), Positives = 127/170 (75%), Gaps = 6/170 (3%)
Query 50 VSFADATIARLPGVVQPY---AQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVT 106
+S ++ +AR+P QPY A RH EL+KF +VGG TF IDTA+FY LKLTVL+PKPVT
Sbjct 1 MSVVESVLARIP---QPYRRIAIRHRELLKFGLVGGVTFFIDTAVFYLLKLTVLDPKPVT 57
Query 107 AKVIAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQ 166
AKV+A +VA I SYVLNREWSFR RGGRERHHEA L+FA SG+GV L APLW S Y+L
Sbjct 58 AKVVAVLVATIVSYVLNREWSFRTRGGRERHHEATLYFAVSGIGVALYAAPLWISRYVLH 117
Query 167 LRVPTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDK 216
L+ P + +E IADF + I+G L+ MAFR+WAFR+WVFPD+ P +
Sbjct 118 LQTPFTTRFVEEIADFTAGQIVGLLVGMAFRWWAFRKWVFPDQKQAAPQE 167
>gi|262201787|ref|YP_003272995.1| GtrA family protein [Gordonia bronchialis DSM 43247]
gi|262085134|gb|ACY21102.1| GtrA family protein [Gordonia bronchialis DSM 43247]
Length=186
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/166 (57%), Positives = 126/166 (76%), Gaps = 1/166 (0%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+ F D +ARLPG ++ A RHHELIKFA+VGGTTF+ D AI++ L LT+LEPKPV AK+
Sbjct 1 MPFIDELVARLPGPIRRLAMRHHELIKFALVGGTTFVFDLAIYFALSLTILEPKPVIAKI 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
I+G++A I SY+LNREW+F++RGGRERHHEA+LFF SG+GV+L APL+ ++ I LR
Sbjct 61 ISGVLATILSYILNREWAFKNRGGRERHHEAMLFFVISGIGVVLQAAPLYVANNIFDLR- 119
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPD 215
++S + DFI ++IGN+LQM FRFWA R++ FP+E R D
Sbjct 120 SSLSPARLVVVDFILGFLIGNILQMTFRFWALRKFAFPEENLRGGD 165
>gi|324997840|ref|ZP_08118952.1| hypothetical protein PseP1_03704 [Pseudonocardia sp. P1]
Length=169
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/167 (60%), Positives = 126/167 (76%), Gaps = 6/167 (3%)
Query 50 VSFADATIARLPGVVQPY---AQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVT 106
++ DAT+ R+P QPY A +H ELIKF +VGGTT++IDTA+F LK VL+ KPVT
Sbjct 1 MTVVDATLRRIP---QPYRDKAIKHRELIKFLMVGGTTWVIDTAVFLLLKAFVLDTKPVT 57
Query 107 AKVIAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQ 166
AKVIA +VA I SYVLNREWSFR RGGR+RHHEA LFF SGVGV + APLW S Y+ +
Sbjct 58 AKVIAVLVATIVSYVLNREWSFRTRGGRDRHHEAALFFLISGVGVAVYSAPLWVSRYVFE 117
Query 167 LRVPTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARN 213
L+VP VSL + +DF++ I+G L+ MAFR+WAFRR+V+PD+F R
Sbjct 118 LQVPVVSLVTQEFSDFVAGQIVGTLVGMAFRWWAFRRFVWPDQFVRR 164
>gi|296138777|ref|YP_003646020.1| GtrA family protein [Tsukamurella paurometabola DSM 20162]
gi|296026911|gb|ADG77681.1| GtrA family protein [Tsukamurella paurometabola DSM 20162]
Length=194
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/177 (54%), Positives = 127/177 (72%), Gaps = 1/177 (0%)
Query 40 ILCSSVHSLVVSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTV 99
+L SS VV+F ++ + R P ++ +HHELIKFAIVG TT + D AIFY+L TV
Sbjct 1 MLSSSARLAVVAFIESIMDRTPAPLRGLVMQHHELIKFAIVGATTCVFDLAIFYSLVFTV 60
Query 100 LEPKPVTAKVIAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLW 159
L+ KP AK+ +G+ AVI SY+LNREWSF++RGGRERHHEALLFF SG+GVL+ AP++
Sbjct 61 LDEKPTVAKIFSGVCAVILSYILNREWSFKNRGGRERHHEALLFFVISGIGVLIMAAPIF 120
Query 160 FSSYILQLRVPTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDK 216
++ + LR T S T + DF+ YI+GNLLQMAFRFWA RRW FP++ + P++
Sbjct 121 IANNVFNLRA-TDSKTTLIVVDFVLNYIVGNLLQMAFRFWALRRWAFPEDMSDAPEQ 176
>gi|256380365|ref|YP_003104025.1| GtrA family protein [Actinosynnema mirum DSM 43827]
gi|255924668|gb|ACU40179.1| GtrA family protein [Actinosynnema mirum DSM 43827]
Length=184
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 96/176 (55%), Positives = 128/176 (73%), Gaps = 0/176 (0%)
Query 49 VVSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAK 108
+VS + RLP ++ A +H EL+KFA+VGGT F+IDTAIF+ LK TVL KPVTAK
Sbjct 1 MVSVLENAAHRLPEPLRSLALKHRELLKFALVGGTCFVIDTAIFFALKSTVLLEKPVTAK 60
Query 109 VIAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLR 168
++A +VA I SYVLNREWSF+ RGGRERHHEA LFF +G+G++L+ PLW S Y+ L+
Sbjct 61 IVATLVATIVSYVLNREWSFKTRGGRERHHEAALFFLVNGIGIVLNSMPLWVSRYLFHLQ 120
Query 169 VPTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTA 224
P VS ++ ++DF SA IIG L+ MAFR++ +++WVFPDE AR P +S +A
Sbjct 121 EPEVSRLVQEVSDFASAQIIGTLIGMAFRWYGYKKWVFPDEGARTPRAERKSYPSA 176
>gi|257054666|ref|YP_003132498.1| hypothetical protein Svir_06000 [Saccharomonospora viridis DSM
43017]
gi|256584538|gb|ACU95671.1| predicted membrane protein [Saccharomonospora viridis DSM 43017]
Length=180
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/164 (57%), Positives = 118/164 (72%), Gaps = 0/164 (0%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
++ ++ +AR+P ++ +H EL+KF +VG TTF++D I+Y LKLT+L KP TAK
Sbjct 1 MAVVESVLARVPEPLRSVLVKHRELVKFVVVGSTTFVVDNGIWYLLKLTILNTKPTTAKA 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IA ++A I SYVLNREWSFR RGGRER HEA LFF SGV V +++ PL+ S Y+L L V
Sbjct 61 IAILIATIVSYVLNREWSFRTRGGRERAHEATLFFLVSGVAVAINLVPLYMSRYVLNLEV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARN 213
P VSL ++ IADF S +IG LL MAFRFW FRRWVFPDE R
Sbjct 121 PHVSLFVQEIADFASGSVIGMLLAMAFRFWGFRRWVFPDELGRK 164
>gi|300782915|ref|YP_003763206.1| GtrA-like protein [Amycolatopsis mediterranei U32]
gi|299792429|gb|ADJ42804.1| GtrA-like protein [Amycolatopsis mediterranei U32]
gi|340524291|gb|AEK39496.1| GtrA-like protein [Amycolatopsis mediterranei S699]
Length=172
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/166 (58%), Positives = 119/166 (72%), Gaps = 3/166 (1%)
Query 54 DATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGI 113
+ + R P ++ +H EL+KFAIVGGTTF++D ++YTLKLTVLEPKP TAK IA I
Sbjct 2 ETVLKRTPEPLRSVLIKHRELLKFAIVGGTTFLVDNGVWYTLKLTVLEPKPTTAKAIAII 61
Query 114 VAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVS 173
VA I SY+LNREWSFR RGGRERHHEA LFF SG+ V +++ PL S Y+L L VP V+
Sbjct 62 VATIVSYILNREWSFRTRGGRERHHEAALFFVISGIAVGVNLVPLIVSRYVLDLEVPHVT 121
Query 174 LTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFA---RNPDK 216
++ IADF S IIG LL M FRFW F++WVFPDE R+ D+
Sbjct 122 FLVQEIADFASGSIIGMLLAMFFRFWGFKKWVFPDELGERRRDNDQ 167
>gi|343927999|ref|ZP_08767464.1| hypothetical protein GOALK_100_00020 [Gordonia alkanivorans NBRC
16433]
gi|343762007|dbj|GAA14390.1| hypothetical protein GOALK_100_00020 [Gordonia alkanivorans NBRC
16433]
Length=167
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/147 (62%), Positives = 115/147 (79%), Gaps = 1/147 (0%)
Query 69 QRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLNREWSF 128
RHHELIKFA+VGGTTFI D AIFY+L LT+LE KPV AKVIAG++A I SY+LNREW+F
Sbjct 1 MRHHELIKFAMVGGTTFIFDLAIFYSLSLTILETKPVIAKVIAGVLATILSYILNREWAF 60
Query 129 RDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIADFISAYII 188
++RGGRERHHEALLFF SG+GV+L APL+ + + +R +S++ + DFI Y+I
Sbjct 61 KNRGGRERHHEALLFFIISGIGVILQAAPLFVGNNVFDMR-SNLSVSEVVVVDFILGYVI 119
Query 189 GNLLQMAFRFWAFRRWVFPDEFARNPD 215
GNL+QMAFRFWA R++ FP+E R D
Sbjct 120 GNLMQMAFRFWALRKFAFPEELLRGGD 146
>gi|331698990|ref|YP_004335229.1| GtrA family protein [Pseudonocardia dioxanivorans CB1190]
gi|326953679|gb|AEA27376.1| GtrA family protein [Pseudonocardia dioxanivorans CB1190]
Length=171
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/160 (59%), Positives = 116/160 (73%), Gaps = 3/160 (1%)
Query 65 QPY---AQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYV 121
QPY A +H EL+KFA+VGGTT++IDT +F LK VLEPKP+TAKVIA +VA I SYV
Sbjct 11 QPYRDIAIKHRELVKFAVVGGTTWVIDTVVFLVLKAGVLEPKPITAKVIAVLVATIVSYV 70
Query 122 LNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIAD 181
LNREWSFR RGGRERHHEA LFF SG+GV + APL S Y+L LRVP +S+ + ++D
Sbjct 71 LNREWSFRTRGGRERHHEAALFFLISGIGVAVYTAPLAISRYLLDLRVPDISMFGQEVSD 130
Query 182 FISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESA 221
F++ IIG ++ M FR+WAFRR+VFPD R S
Sbjct 131 FVAGQIIGTIVGMIFRWWAFRRFVFPDTDVRRQQPVAHSG 170
>gi|302524274|ref|ZP_07276616.1| transmembrane protein [Streptomyces sp. AA4]
gi|302433169|gb|EFL04985.1| transmembrane protein [Streptomyces sp. AA4]
Length=199
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/162 (59%), Positives = 115/162 (71%), Gaps = 0/162 (0%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
V+ + +AR P ++ +H EL+KFAIVGGTTF++D ++Y LKL+VLE KP TAK
Sbjct 26 VTVVETVLARTPEPLRSVLVKHRELLKFAIVGGTTFLVDNGVWYLLKLSVLESKPTTAKA 85
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
IA IVA I SYVLNREWSFR RGGRER HEA LFF SGV V++++ PL S Y L L V
Sbjct 86 IAIIVATIVSYVLNREWSFRTRGGRERAHEATLFFLISGVAVVVNLIPLLISRYGLHLEV 145
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFA 211
P VS ++ IADF S IIG LL M FRFW F++WVFPDE
Sbjct 146 PHVSRLVQEIADFASGSIIGMLLAMVFRFWGFKKWVFPDELG 187
>gi|326382021|ref|ZP_08203714.1| GtrA family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326199447|gb|EGD56628.1| GtrA family protein [Gordonia neofelifaecis NRRL B-59395]
Length=179
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/153 (59%), Positives = 114/153 (75%), Gaps = 1/153 (0%)
Query 60 LPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIAS 119
LP V+ +H ELIKFAIVGGTTF++D A++Y L +VLE KPV A++I+G+VAVI S
Sbjct 4 LPEPVRRLVLKHSELIKFAIVGGTTFVVDMAVYYALVFSVLEAKPVIARIISGVVAVILS 63
Query 120 YVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENI 179
YVLNREW+F++RGGRE+HHEA+LFF SG+GVLL+ APLW + + +R + + I
Sbjct 64 YVLNREWAFKNRGGREKHHEAMLFFGISGIGVLLAAAPLWLGNNVFNMRENIQGVELA-I 122
Query 180 ADFISAYIIGNLLQMAFRFWAFRRWVFPDEFAR 212
DFI +IIGNLL M FRFWA RR+ FPDE R
Sbjct 123 VDFILGFIIGNLLGMGFRFWALRRFAFPDEQPR 155
>gi|257054572|ref|YP_003132404.1| hypothetical protein Svir_05020 [Saccharomonospora viridis DSM
43017]
gi|256584444|gb|ACU95577.1| predicted membrane protein [Saccharomonospora viridis DSM 43017]
Length=171
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/165 (54%), Positives = 115/165 (70%), Gaps = 0/165 (0%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
+S A ARLPGV + ++HEL+KFA VG TF+ID A++Y LKLTVLE P TAK
Sbjct 1 MSVLAAVAARLPGVSRVLTGKNHELLKFATVGAITFVIDNAVWYLLKLTVLEDHPTTAKG 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
+ +VA IASYVLNREWSFR RGGRER HEA LFF S +++++ PL+ S Y+L L
Sbjct 61 VGILVATIASYVLNREWSFRTRGGRERPHEAALFFLVSAAALVVNVTPLYVSRYVLGLHR 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNP 214
P V L + +ADF S ++G L M +RFWAFRRWVFP++ + +P
Sbjct 121 PHVDLFTQEVADFFSGSVLGVGLAMVWRFWAFRRWVFPEDVSESP 165
>gi|226308571|ref|YP_002768531.1| hypothetical protein RER_50840 [Rhodococcus erythropolis PR4]
gi|229488393|ref|ZP_04382259.1| GtrA family protein [Rhodococcus erythropolis SK121]
gi|226187688|dbj|BAH35792.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
gi|229323897|gb|EEN89652.1| GtrA family protein [Rhodococcus erythropolis SK121]
Length=187
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 117/176 (67%), Gaps = 1/176 (0%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
++F + + RLP V H E++KF +VGG FI+ T +F+ +K TVL PVTA +
Sbjct 1 MAFVEKMVNRLPERVLVRVLPHAEMLKFLVVGGIAFIVTTVLFFGIKWTVLPQHPVTANI 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
+A ++A + SYVLNREWSF RGGR+RHHEA LFF +G+G+ ++ PLW S Y+ LR
Sbjct 61 LAVLIATVLSYVLNREWSFAQRGGRQRHHEAALFFIVAGIGLAINQVPLWTSRYVFHLRQ 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPDKALESALTAG 225
P VS+ MEN ADFIS IIG LL AFR+WA RR+VFP+E A + L+ T G
Sbjct 121 PEVSVLMENFADFISGSIIGTLLATAFRWWAMRRYVFPEE-ATDSQVVLDIEATPG 175
>gi|317509328|ref|ZP_07966948.1| GtrA protein [Segniliparus rugosus ATCC BAA-974]
gi|316252384|gb|EFV11834.1| GtrA protein [Segniliparus rugosus ATCC BAA-974]
Length=187
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/153 (56%), Positives = 111/153 (73%), Gaps = 2/153 (1%)
Query 55 ATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIV 114
A + LPG +Q + RHHELIKFA+VG TTF+ D AI+Y L T L+ K TAKV++GI+
Sbjct 18 AVLRLLPGPLQRFLVRHHELIKFAVVGATTFVFDMAIYYGLIFTALDTKHTTAKVVSGIL 77
Query 115 AVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSL 174
A + SY+LN EWSF+ RGGR+RHHEALLFF SG+GVLL+ AP+W + + L SL
Sbjct 78 ATVLSYILNSEWSFKHRGGRQRHHEALLFFVISGIGVLLAAAPIWVAHNLCGL-AQDKSL 136
Query 175 TMENIADFISAYIIGNLLQMAFRFWAFRRWVFP 207
+ + DF+ AY+IGN LQMAFRFWA R++ +P
Sbjct 137 RI-GVIDFMLAYVIGNFLQMAFRFWALRKFAYP 168
>gi|296395350|ref|YP_003660234.1| GtrA family protein [Segniliparus rotundus DSM 44985]
gi|296182497|gb|ADG99403.1| GtrA family protein [Segniliparus rotundus DSM 44985]
Length=192
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/174 (49%), Positives = 114/174 (66%), Gaps = 2/174 (1%)
Query 55 ATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIV 114
A + LP +Q RHHELIKF +VG TT + D A++Y L TV+ KP AK+ +G++
Sbjct 18 AVLRLLPRPLQALLLRHHELIKFGVVGATTMVFDMAVYYALIFTVMPTKPTVAKIFSGVL 77
Query 115 AVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSL 174
A + SY+LN EWSF+ RGGR+RHHEALLFF SG+G LL APLW ++ + +R S
Sbjct 78 ATVLSYILNSEWSFKHRGGRQRHHEALLFFGISGIGALLGAAPLWVANNLFHIRHGG-SW 136
Query 175 TMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNP-DKALESALTAGGI 227
+ DF+ AYIIGN++QMAFRFWA R++ +P P D+ ESA TA +
Sbjct 137 MHTVLVDFVLAYIIGNVMQMAFRFWALRKFAYPVLLDDLPADETAESADTAASL 190
>gi|302524275|ref|ZP_07276617.1| transmembrane protein [Streptomyces sp. AA4]
gi|302433170|gb|EFL04986.1| transmembrane protein [Streptomyces sp. AA4]
Length=166
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/153 (55%), Positives = 106/153 (70%), Gaps = 7/153 (4%)
Query 70 RHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLNREWSFR 129
+H EL++FA+VGGT+F+I I Y LK TVL PVTA ++ ++A I SYV NREW+FR
Sbjct 7 KHRELVRFALVGGTSFVITLTITYVLKFTVLRTHPVTALIVGVLIATIFSYVANREWAFR 66
Query 130 DRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIADFISAYIIG 189
RGGRER HEA LFF SGV + L+ P W S Y+LQL+VP VSL + +ADF+S +IG
Sbjct 67 TRGGRERAHEAALFFLISGVALGLNALPQWVSRYVLQLQVPHVSLVGQEVADFVSGMVIG 126
Query 190 NLLQMAFRFWAFRRWVFPDEFAR-------NPD 215
LL FR+WAF++WVFP E AR NPD
Sbjct 127 TLLGTLFRWWAFKKWVFPTEGARPESARYDNPD 159
>gi|54025664|ref|YP_119906.1| hypothetical protein nfa36940 [Nocardia farcinica IFM 10152]
gi|54017172|dbj|BAD58542.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=171
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 80/161 (50%), Positives = 112/161 (70%), Gaps = 0/161 (0%)
Query 50 VSFADATIARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKV 109
++ + + R+P ++ A H EL+KFA VG T+ IDT + Y +KLTVL KP+TA++
Sbjct 1 MTVVQSVLDRMPEPLRSKAIEHRELLKFATVGAITWFIDTGVVYAVKLTVLGEKPLTARL 60
Query 110 IAGIVAVIASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRV 169
+ ++A IASY+LNREWSFR RGGR+RHHEA LFFA S + + ++M P S Y+L LRV
Sbjct 61 LGVLIATIASYILNREWSFRTRGGRQRHHEAALFFAVSALAIGVTMIPQAISLYVLDLRV 120
Query 170 PTVSLTMENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEF 210
P V + +A+F++ I+G LL M FRFWA RR+VFPD+
Sbjct 121 PHVGPVTQAVANFVTGQILGVLLAMGFRFWALRRFVFPDDL 161
>gi|300782916|ref|YP_003763207.1| GtrA-like protein [Amycolatopsis mediterranei U32]
gi|299792430|gb|ADJ42805.1| GtrA-like protein [Amycolatopsis mediterranei U32]
gi|340524292|gb|AEK39497.1| GtrA-like protein [Amycolatopsis mediterranei S699]
Length=169
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/163 (51%), Positives = 109/163 (67%), Gaps = 3/163 (1%)
Query 69 QRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAVIASYVLNREWSF 128
++H EL++FA+VGG +F+I +I Y+LK TVL PVTA ++ +VA I SYV NREWSF
Sbjct 6 KKHRELLRFAVVGGISFVITMSIDYSLKFTVLRTHPVTALIVGVLVATIFSYVANREWSF 65
Query 129 RDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTMENIADFISAYII 188
R RGGRER HEA LFF FSG+ + L+ P W S Y+L L+VP +S +ADF+S I+
Sbjct 66 RTRGGRERAHEAALFFLFSGIALGLNALPQWVSRYVLDLQVPRLSPFGVEVADFVSGIIV 125
Query 189 GNLLQMAFRFWAFRRWVFPDEFARN---PDKALESALTAGGIA 228
G +L FR+WAF+RWVFPD R P ++LE G A
Sbjct 126 GTVLGTLFRWWAFKRWVFPDADGRPRAVPAESLEDPDIHGSKA 168
>gi|258654343|ref|YP_003203499.1| GtrA family protein [Nakamurella multipartita DSM 44233]
gi|258557568|gb|ACV80510.1| GtrA family protein [Nakamurella multipartita DSM 44233]
Length=200
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/181 (49%), Positives = 115/181 (64%), Gaps = 1/181 (0%)
Query 57 IARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAV 116
+A + V Q ++ EL KF +VGGT++++D +F L TVL K VTAK I+ IVA
Sbjct 1 MALIDSVRQHLPVKYRELAKFLVVGGTSYVVDVGLFSLLSHTVLSDKVVTAKGISVIVAT 60
Query 117 IASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTM 176
I SY+LNREWSF RGGRERHHEA+LFF +G+ + L++ PL S YI + S
Sbjct 61 ILSYILNREWSFNSRGGRERHHEAMLFFVVNGIALGLNLVPLAVSQYIFGINTANYSSLT 120
Query 177 ENIADFISAYIIGNLLQMAFRFWAFRRWVFPDEFARNPD-KALESALTAGGIAEVFEDVL 235
IA+F+SA +IG L MAFRFWA+R+WVFP+E +P+ A E A A A V E +
Sbjct 121 VTIANFVSANVIGTALGMAFRFWAYRKWVFPEELNPHPEIVATELAAQAAVEAPVTERIP 180
Query 236 E 236
E
Sbjct 181 E 181
>gi|311898338|dbj|BAJ30746.1| hypothetical protein KSE_49680 [Kitasatospora setae KM-6054]
Length=180
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/162 (45%), Positives = 96/162 (60%), Gaps = 5/162 (3%)
Query 57 IARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAV 116
+A +P +P+ +H L+KF +VGGT F++ I + LK TVLE KPV A IA ++
Sbjct 9 LAAVPERYRPFLVKHRTLVKFLVVGGTCFLLTMVINFALKTTVLESKPVVALTIATVITT 68
Query 117 IASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTM 176
+ SYVLNR+WSFR G R EA FF S + V ++ PL S Y+ R P VS
Sbjct 69 VISYVLNRKWSFRAVG---RKREAAGFFLVSALAVGVNDLPLVASRYVFDFRTPDVSHFS 125
Query 177 ENIADFISAYIIGNLLQMAFRFWAFRRWVFPD--EFARNPDK 216
+ +ADF S I+G LL MAFRFWA R+VF + E R D+
Sbjct 126 QELADFFSGMIVGTLLAMAFRFWAMNRFVFTELAERVREDDQ 167
>gi|84498097|ref|ZP_00996894.1| probable conserved transmembrane protein [Janibacter sp. HTCC2649]
gi|84381597|gb|EAP97480.1| probable conserved transmembrane protein [Janibacter sp. HTCC2649]
Length=185
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/153 (42%), Positives = 88/153 (58%), Gaps = 12/153 (7%)
Query 57 IARLPGVVQPYAQRHHELIKFAIVGGTTFIIDTAIFYTLKLTVLEPKPVTAKVIAGIVAV 116
IARL G V + E+IKF ++G F+ID F L+ T+LE KP A +I+ +A
Sbjct 21 IARLRGAVDVL---YREVIKFGVIGVIAFVIDMGSFNLLRHTILEDKPTAAVIISASIAT 77
Query 117 IASYVLNREWSFRDRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYILQLRVPTVSLTM 176
++V NR W+FR R R HHEA LF +GV +L+ A + FS+Y+L SLT
Sbjct 78 AFAWVGNRAWTFRHRRNRPAHHEAALFAGTNGVALLIQAAAVAFSNYVLGYE----SLTA 133
Query 177 ENIADFISAYIIGNLLQMAFRFWAFRRWVFPDE 209
+N+A I+G L FRFWA+RR+VF E
Sbjct 134 DNVAK-----IVGIGLGTLFRFWAYRRFVFAGE 161
Lambda K H
0.325 0.137 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 423010730970
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40