BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3284
Length=143
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610420|ref|NP_217801.1| hypothetical protein Rv3284 [Mycoba... 279 9e-74
gi|296168916|ref|ZP_06850585.1| SufE protein [Mycobacterium para... 250 5e-65
gi|240171605|ref|ZP_04750264.1| hypothetical protein MkanA1_1998... 247 4e-64
gi|342861498|ref|ZP_08718145.1| hypothetical protein MCOL_21536 ... 241 3e-62
gi|183981274|ref|YP_001849565.1| Fe-S metabolism associated prot... 241 4e-62
gi|254819522|ref|ZP_05224523.1| Fe-S metabolism associated domai... 240 6e-62
gi|118618103|ref|YP_906435.1| Fe-S metabolism associated protein... 239 1e-61
gi|108798261|ref|YP_638458.1| Fe-S metabolism associated SufE [M... 231 2e-59
gi|118473389|ref|YP_886180.1| Fe-S metabolism associated SufE [M... 229 9e-59
gi|41409501|ref|NP_962337.1| hypothetical protein MAP3403 [Mycob... 221 2e-56
gi|333991684|ref|YP_004524298.1| Fe-S metabolism associated prot... 216 1e-54
gi|120402674|ref|YP_952503.1| Fe-S metabolism associated SufE [M... 215 2e-54
gi|315445706|ref|YP_004078585.1| SufE protein probably involved ... 214 3e-54
gi|145225359|ref|YP_001136037.1| Fe-S metabolism associated SufE... 213 9e-54
gi|169630721|ref|YP_001704370.1| putative SufE-like protein [Myc... 204 2e-51
gi|312140729|ref|YP_004008065.1| fe-s cluster assembly protein s... 203 6e-51
gi|333921494|ref|YP_004495075.1| hypothetical protein AS9A_3837 ... 194 4e-48
gi|111023247|ref|YP_706219.1| hypothetical protein RHA1_ro06284 ... 192 2e-47
gi|226365756|ref|YP_002783539.1| SufE family protein [Rhodococcu... 190 5e-47
gi|226305610|ref|YP_002765570.1| SufE family protein [Rhodococcu... 188 2e-46
gi|229489447|ref|ZP_04383310.1| Fe-S metabolism associated SufE ... 188 3e-46
gi|289571511|ref|ZP_06451738.1| conserved hypothetical protein [... 186 1e-45
gi|296138762|ref|YP_003646005.1| Fe-S metabolism associated SufE... 184 3e-45
gi|262201775|ref|YP_003272983.1| Fe-S metabolism associated SufE... 179 2e-43
gi|326382010|ref|ZP_08203703.1| Fe-S metabolism associated SufE ... 178 2e-43
gi|343926707|ref|ZP_08766205.1| putative SufE family protein [Go... 177 5e-43
gi|260905929|ref|ZP_05914251.1| SufE protein probably involved i... 147 6e-34
gi|324997336|ref|ZP_08118448.1| Fe-S metabolism associated SufE ... 145 1e-33
gi|289705555|ref|ZP_06501947.1| Fe-S metabolism associated domai... 144 5e-33
gi|184201053|ref|YP_001855260.1| SufE family protein [Kocuria rh... 142 1e-32
gi|239917579|ref|YP_002957137.1| SufE protein probably involved ... 141 2e-32
gi|317124364|ref|YP_004098476.1| Fe-S metabolism associated SufE... 139 1e-31
gi|331699013|ref|YP_004335252.1| Fe-S metabolism associated SufE... 137 5e-31
gi|116670226|ref|YP_831159.1| Fe-S metabolism associated SufE [A... 137 6e-31
gi|257067568|ref|YP_003153823.1| SufE protein probably involved ... 137 6e-31
gi|170782041|ref|YP_001710373.1| hypothetical protein CMS_1650 [... 135 3e-30
gi|295396291|ref|ZP_06806466.1| SufE protein [Brevibacterium mcb... 134 5e-30
gi|220912425|ref|YP_002487734.1| Fe-S metabolism associated SufE... 131 4e-29
gi|148272848|ref|YP_001222409.1| hypothetical protein CMM_1666 [... 130 5e-29
gi|297623025|ref|YP_003704459.1| Fe-S metabolism associated SufE... 130 5e-29
gi|119961245|ref|YP_947565.1| sufE protein [Arthrobacter auresce... 129 1e-28
gi|152967024|ref|YP_001362808.1| Fe-S metabolism associated SufE... 128 2e-28
gi|229821132|ref|YP_002882658.1| Fe-S metabolism associated SufE... 127 4e-28
gi|325963035|ref|YP_004240941.1| SufE protein probably involved ... 127 8e-28
gi|15805252|ref|NP_293940.1| hypothetical protein DR_0216 [Deino... 126 9e-28
gi|269955711|ref|YP_003325500.1| Fe-S metabolism associated SufE... 126 1e-27
gi|88856893|ref|ZP_01131545.1| hypothetical protein A20C1_03563 ... 125 3e-27
gi|308177759|ref|YP_003917165.1| SufE-like protein [Arthrobacter... 124 4e-27
gi|302864553|ref|YP_003833190.1| Fe-S metabolism associated SufE... 123 7e-27
gi|238061933|ref|ZP_04606642.1| iron-sulfur metabolism associate... 122 1e-26
>gi|15610420|ref|NP_217801.1| hypothetical protein Rv3284 [Mycobacterium tuberculosis H37Rv]
gi|15842875|ref|NP_337912.1| hypothetical protein MT3383 [Mycobacterium tuberculosis CDC1551]
gi|31794464|ref|NP_856957.1| hypothetical protein Mb3312 [Mycobacterium bovis AF2122/97]
80 more sequence titles
Length=143
Score = 279 bits (714), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%)
Query 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLF 60
MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLF
Sbjct 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLF 60
Query 61 LHVDASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALI 120
LHVDASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALI
Sbjct 61 LHVDASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALI 120
Query 121 SPLRLRGMSAMLARIKRRLREAD 143
SPLRLRGMSAMLARIKRRLREAD
Sbjct 121 SPLRLRGMSAMLARIKRRLREAD 143
>gi|296168916|ref|ZP_06850585.1| SufE protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896385|gb|EFG76038.1| SufE protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=139
Score = 250 bits (638), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 127/136 (94%), Positives = 131/136 (97%), Gaps = 0/136 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
+LPAPLAEVVSDFAEVQGQDKL LLLEFAN+LPALP L E AMEPVPECQ+PLFLHVDA
Sbjct 2 TLPAPLAEVVSDFAEVQGQDKLALLLEFANDLPALPPELEERAMEPVPECQTPLFLHVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYT+LGLAALISPLRL
Sbjct 62 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTDLGLAALISPLRL 121
Query 126 RGMSAMLARIKRRLRE 141
RGMSAMLARIKRRLRE
Sbjct 122 RGMSAMLARIKRRLRE 137
>gi|240171605|ref|ZP_04750264.1| hypothetical protein MkanA1_19983 [Mycobacterium kansasii ATCC
12478]
Length=139
Score = 247 bits (631), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/136 (93%), Positives = 130/136 (96%), Gaps = 0/136 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
SLPAPLAEVVSDFAEVQGQDKL+LLLEFA+ELPALP+ L E AMEPVPECQSPLFLHVDA
Sbjct 2 SLPAPLAEVVSDFAEVQGQDKLKLLLEFADELPALPAELEEQAMEPVPECQSPLFLHVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
S+P RVRLHFSAPAEAPTTRGFASILAAGLD QPAADILAVPEDFY ELGLAALISPLRL
Sbjct 62 SNPQRVRLHFSAPAEAPTTRGFASILAAGLDGQPAADILAVPEDFYAELGLAALISPLRL 121
Query 126 RGMSAMLARIKRRLRE 141
RGMSAMLARIKRRLRE
Sbjct 122 RGMSAMLARIKRRLRE 137
>gi|342861498|ref|ZP_08718145.1| hypothetical protein MCOL_21536 [Mycobacterium colombiense CECT
3035]
gi|342130987|gb|EGT84276.1| hypothetical protein MCOL_21536 [Mycobacterium colombiense CECT
3035]
Length=139
Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/137 (89%), Positives = 131/137 (96%), Gaps = 0/137 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
S+PAPLAEVVSDFAEV+GQDKL LLLEFANELPALP L ++AMEPVPECQ+PLFLHVDA
Sbjct 2 SMPAPLAEVVSDFAEVEGQDKLALLLEFANELPALPPDLEQAAMEPVPECQTPLFLHVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
SDP RVRLHFSAPAE+PTTRGFASILAAGLDEQPAADILAVPEDFY +LGLAALISPLRL
Sbjct 62 SDPERVRLHFSAPAESPTTRGFASILAAGLDEQPAADILAVPEDFYADLGLAALISPLRL 121
Query 126 RGMSAMLARIKRRLREA 142
RG+SAMLARIKRR+RE+
Sbjct 122 RGLSAMLARIKRRVRES 138
>gi|183981274|ref|YP_001849565.1| Fe-S metabolism associated protein, SufE [Mycobacterium marinum
M]
gi|183174600|gb|ACC39710.1| Fe-S metabolism associated protein, SufE [Mycobacterium marinum
M]
Length=139
Score = 241 bits (614), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/136 (89%), Positives = 130/136 (96%), Gaps = 0/136 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
S+PAPLAEVVSDF EVQGQDKL LLLEFANELP LPS LAE+AMEPVPECQSPLFLHVDA
Sbjct 2 SMPAPLAEVVSDFGEVQGQDKLALLLEFANELPPLPSDLAEAAMEPVPECQSPLFLHVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
DP+RVRL+FSAPA+APTTRGFA+ILAAGLDEQPA++ILAVPEDFY+ELGLA LISPLRL
Sbjct 62 QDPDRVRLYFSAPAQAPTTRGFAAILAAGLDEQPASEILAVPEDFYSELGLADLISPLRL 121
Query 126 RGMSAMLARIKRRLRE 141
RGMSAMLARIKRRLRE
Sbjct 122 RGMSAMLARIKRRLRE 137
>gi|254819522|ref|ZP_05224523.1| Fe-S metabolism associated domain-containing protein [Mycobacterium
intracellulare ATCC 13950]
Length=140
Score = 240 bits (612), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/137 (88%), Positives = 130/137 (95%), Gaps = 0/137 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
S+PAPLAEVVSDFAEV+GQDKL+LLLEFA+ELP LP L E AMEPVPECQ+PLFLHVDA
Sbjct 2 SMPAPLAEVVSDFAEVEGQDKLKLLLEFADELPDLPPELEERAMEPVPECQTPLFLHVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
SDPNRVRLHFSAPAE+PTTRGFASILA GLDEQPAA+ILAVPEDFY +LGLAALISPLRL
Sbjct 62 SDPNRVRLHFSAPAESPTTRGFASILATGLDEQPAAEILAVPEDFYDDLGLAALISPLRL 121
Query 126 RGMSAMLARIKRRLREA 142
RG+SAMLARIKRRLRE+
Sbjct 122 RGLSAMLARIKRRLRES 138
>gi|118618103|ref|YP_906435.1| Fe-S metabolism associated protein, SufE [Mycobacterium ulcerans
Agy99]
gi|118570213|gb|ABL04964.1| Fe-S metabolism associated protein, SufE [Mycobacterium ulcerans
Agy99]
Length=139
Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/136 (89%), Positives = 129/136 (95%), Gaps = 0/136 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
S+PAPLAEVVSDF EVQGQDKL LLLEFANELP LPS LAE+AMEPVPECQSPLFLHVDA
Sbjct 2 SMPAPLAEVVSDFGEVQGQDKLALLLEFANELPPLPSDLAEAAMEPVPECQSPLFLHVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
DP+RVRL+FSAPA+APTTRGFA+ILAAGLDEQPA++ILAVPEDFY+ELGLA LISPLRL
Sbjct 62 QDPDRVRLYFSAPAQAPTTRGFAAILAAGLDEQPASEILAVPEDFYSELGLADLISPLRL 121
Query 126 RGMSAMLARIKRRLRE 141
RGMSAM ARIKRRLRE
Sbjct 122 RGMSAMFARIKRRLRE 137
>gi|108798261|ref|YP_638458.1| Fe-S metabolism associated SufE [Mycobacterium sp. MCS]
gi|119867357|ref|YP_937309.1| Fe-S metabolism associated SufE [Mycobacterium sp. KMS]
gi|126433928|ref|YP_001069619.1| Fe-S metabolism associated SufE [Mycobacterium sp. JLS]
gi|108768680|gb|ABG07402.1| Fe-S metabolism associated SufE [Mycobacterium sp. MCS]
gi|119693446|gb|ABL90519.1| Fe-S metabolism associated SufE [Mycobacterium sp. KMS]
gi|126233728|gb|ABN97128.1| Fe-S metabolism associated SufE [Mycobacterium sp. JLS]
Length=138
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/137 (84%), Positives = 126/137 (92%), Gaps = 0/137 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
++PAPLAEVVS+F EVQGQDKLRLLLEFA++LPALPS L E+AMEPVPECQSPLFLHVDA
Sbjct 2 TMPAPLAEVVSEFQEVQGQDKLRLLLEFADDLPALPSELEEAAMEPVPECQSPLFLHVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
D +RVRL+FSAPAEAPTTRGFA+ILA GLDEQ A DIL VP+DFYTELGLAALISPLRL
Sbjct 62 GDRDRVRLYFSAPAEAPTTRGFAAILATGLDEQAAEDILGVPDDFYTELGLAALISPLRL 121
Query 126 RGMSAMLARIKRRLREA 142
RGMSAML RIKRRLR+
Sbjct 122 RGMSAMLTRIKRRLRDG 138
>gi|118473389|ref|YP_886180.1| Fe-S metabolism associated SufE [Mycobacterium smegmatis str.
MC2 155]
gi|118174676|gb|ABK75572.1| Fe-S metabolism associated SufE [Mycobacterium smegmatis str.
MC2 155]
Length=136
Score = 229 bits (585), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 117/136 (87%), Positives = 125/136 (92%), Gaps = 0/136 (0%)
Query 7 LPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDAS 66
+PA LAEVVSDF EV GQDKL+LLLEFANELP LP+HL E+AMEPVPECQSPLFL VDAS
Sbjct 1 MPAALAEVVSDFQEVAGQDKLQLLLEFANELPPLPAHLEEAAMEPVPECQSPLFLDVDAS 60
Query 67 DPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRLR 126
DP VRL+FSAPAEAPTTRGFA+ILAAGLD QPAADILAVP+DFY+ELGLAALISPLRLR
Sbjct 61 DPQAVRLYFSAPAEAPTTRGFAAILAAGLDGQPAADILAVPDDFYSELGLAALISPLRLR 120
Query 127 GMSAMLARIKRRLREA 142
GMSAML RIKRRLR A
Sbjct 121 GMSAMLTRIKRRLRTA 136
>gi|41409501|ref|NP_962337.1| hypothetical protein MAP3403 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463968|ref|YP_883395.1| Fe-S metabolism associated domain-containing protein [Mycobacterium
avium 104]
gi|254776689|ref|ZP_05218205.1| Fe-S metabolism associated domain-containing protein [Mycobacterium
avium subsp. avium ATCC 25291]
gi|41398332|gb|AAS05953.1| hypothetical protein MAP_3403 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118165255|gb|ABK66152.1| Fe-S metabolism associated domain subfamily protein [Mycobacterium
avium 104]
gi|336459634|gb|EGO38569.1| SufE protein probably involved in Fe-S center assembly [Mycobacterium
avium subsp. paratuberculosis S397]
Length=140
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/137 (87%), Positives = 128/137 (94%), Gaps = 0/137 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
S+PAPLAEVVSDFAEVQGQDKL LLLEFANELP LP L E+AMEPVPECQ+PLF+HVDA
Sbjct 2 SIPAPLAEVVSDFAEVQGQDKLALLLEFANELPPLPPELEEAAMEPVPECQTPLFMHVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
SD NRVRLHFSAPAE+PTTRGFA+ILA GLD QPAADILAVPEDFY +LGLAALISPLRL
Sbjct 62 SDRNRVRLHFSAPAESPTTRGFAAILATGLDRQPAADILAVPEDFYDDLGLAALISPLRL 121
Query 126 RGMSAMLARIKRRLREA 142
RG+SAMLARIKRRLRE+
Sbjct 122 RGLSAMLARIKRRLRES 138
>gi|333991684|ref|YP_004524298.1| Fe-S metabolism associated protein SufE [Mycobacterium sp. JDM601]
gi|333487652|gb|AEF37044.1| Fe-S metabolism associated protein SufE [Mycobacterium sp. JDM601]
Length=138
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/137 (82%), Positives = 120/137 (88%), Gaps = 0/137 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
SLP LA+VVSDFAEV+GQDKL+LLLEF++ELP LP L ESAMEPVPECQSPLFLHVDA
Sbjct 2 SLPEGLAQVVSDFAEVEGQDKLKLLLEFSDELPDLPDDLVESAMEPVPECQSPLFLHVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
+D RVRL+FSAP EAPTTRGFASI AAGLD QPA ILAVPEDF + LGLAALISPLRL
Sbjct 62 ADRQRVRLYFSAPPEAPTTRGFASIWAAGLDGQPADVILAVPEDFASSLGLAALISPLRL 121
Query 126 RGMSAMLARIKRRLREA 142
RGMSAML RIKRRLR A
Sbjct 122 RGMSAMLTRIKRRLRAA 138
>gi|120402674|ref|YP_952503.1| Fe-S metabolism associated SufE [Mycobacterium vanbaalenii PYR-1]
gi|119955492|gb|ABM12497.1| Fe-S metabolism associated SufE [Mycobacterium vanbaalenii PYR-1]
Length=137
Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/136 (81%), Positives = 119/136 (88%), Gaps = 0/136 (0%)
Query 5 ASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVD 64
+++PAPLAEVVSDF EV+GQDKL LLLEFA ELP LP L E+AMEPVPECQSPLFLHVD
Sbjct 2 SAMPAPLAEVVSDFKEVEGQDKLALLLEFAGELPPLPDELEEAAMEPVPECQSPLFLHVD 61
Query 65 ASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLR 124
A D VRL+FSAPAEAPTTRGFA+ILA GLD Q A DILAVP+DFYT+LGLA LISPLR
Sbjct 62 ADDRAHVRLYFSAPAEAPTTRGFAAILATGLDGQSAEDILAVPDDFYTDLGLAKLISPLR 121
Query 125 LRGMSAMLARIKRRLR 140
LRGMSAMLARIK RL+
Sbjct 122 LRGMSAMLARIKNRLK 137
>gi|315445706|ref|YP_004078585.1| SufE protein probably involved in Fe-S center assembly [Mycobacterium
sp. Spyr1]
gi|315264009|gb|ADU00751.1| SufE protein probably involved in Fe-S center assembly [Mycobacterium
sp. Spyr1]
Length=136
Score = 214 bits (545), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/134 (82%), Positives = 118/134 (89%), Gaps = 0/134 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
S+PA LAEVVSDF EV+GQDKL LLLEFA+ELP LP+ L E+AMEPVPECQSPLFLHVDA
Sbjct 2 SMPAALAEVVSDFKEVEGQDKLALLLEFADELPPLPAELEEAAMEPVPECQSPLFLHVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
D VRL FSAPAEAPTTRGFA+ILA GLD Q AADILAVP+DFYT+LGLA LISPLRL
Sbjct 62 GDRGHVRLFFSAPAEAPTTRGFAAILATGLDGQSAADILAVPDDFYTDLGLAKLISPLRL 121
Query 126 RGMSAMLARIKRRL 139
RGMSAML RIK+RL
Sbjct 122 RGMSAMLTRIKKRL 135
>gi|145225359|ref|YP_001136037.1| Fe-S metabolism associated SufE [Mycobacterium gilvum PYR-GCK]
gi|145217845|gb|ABP47249.1| Fe-S metabolism associated SufE [Mycobacterium gilvum PYR-GCK]
Length=136
Score = 213 bits (541), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 108/134 (81%), Positives = 118/134 (89%), Gaps = 0/134 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
S+PA LAEVVSDF +V GQDKL LLLEFA+ELP LP+ L E+AMEPVPECQSPLFLHVDA
Sbjct 2 SMPAALAEVVSDFKDVDGQDKLALLLEFADELPPLPAELEEAAMEPVPECQSPLFLHVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
D + VRL FSAPAEAPTTRGFA+ILA GLD Q AADILAVP+DFYT+LGLA LISPLRL
Sbjct 62 DDRDHVRLFFSAPAEAPTTRGFAAILATGLDGQSAADILAVPDDFYTDLGLAKLISPLRL 121
Query 126 RGMSAMLARIKRRL 139
RGMSAML RIK+RL
Sbjct 122 RGMSAMLTRIKKRL 135
>gi|169630721|ref|YP_001704370.1| putative SufE-like protein [Mycobacterium abscessus ATCC 19977]
gi|169242688|emb|CAM63716.1| Hypothetical SufE-like protein [Mycobacterium abscessus]
Length=136
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/134 (78%), Positives = 115/134 (86%), Gaps = 0/134 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
+LPA LAE+V+DF V GQDKL+LLLEF++ELP LPSHL ++AMEPVPECQSPLFL VDA
Sbjct 2 TLPAELAEIVADFKAVDGQDKLQLLLEFSSELPELPSHLEQAAMEPVPECQSPLFLDVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
SD V L+FSAPAEAPTTRGFASIL GLD Q A ILAVP+DFY +LGLAALISPLRL
Sbjct 62 SDRTEVHLYFSAPAEAPTTRGFASILQQGLDGQSADAILAVPDDFYADLGLAALISPLRL 121
Query 126 RGMSAMLARIKRRL 139
RGMSAML RIKRRL
Sbjct 122 RGMSAMLTRIKRRL 135
>gi|312140729|ref|YP_004008065.1| fe-s cluster assembly protein sufe [Rhodococcus equi 103S]
gi|325675632|ref|ZP_08155316.1| SufE protein [Rhodococcus equi ATCC 33707]
gi|311890068|emb|CBH49386.1| Fe-S cluster assembly protein SufE [Rhodococcus equi 103S]
gi|325553603|gb|EGD23281.1| SufE protein [Rhodococcus equi ATCC 33707]
Length=137
Score = 203 bits (517), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/136 (77%), Positives = 114/136 (84%), Gaps = 0/136 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
SLPA LAE+V DFA V GQDKL+LLLEF+ EL LP+ L + AMEPVPECQSPLFL VD+
Sbjct 2 SLPASLAEIVDDFAAVDGQDKLQLLLEFSRELAPLPAELEQDAMEPVPECQSPLFLFVDS 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
SDP RVRLHFSAPAEAPTTRGFASIL GLD AA ILAVP+DFY++LGLA +SPLRL
Sbjct 62 SDPERVRLHFSAPAEAPTTRGFASILHQGLDGHSAATILAVPDDFYSDLGLADAVSPLRL 121
Query 126 RGMSAMLARIKRRLRE 141
RGMSAMLARIKR LR
Sbjct 122 RGMSAMLARIKRHLRN 137
>gi|333921494|ref|YP_004495075.1| hypothetical protein AS9A_3837 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483715|gb|AEF42275.1| hypothetical protein AS9A_3837 [Amycolicicoccus subflavus DQS3-9A1]
Length=140
Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/137 (71%), Positives = 111/137 (82%), Gaps = 0/137 (0%)
Query 5 ASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVD 64
SLP L ++V DF V GQDKL+LLLEF+ ELP+LP L E+AMEPVPECQSPLFL VD
Sbjct 2 GSLPESLGDIVEDFRSVDGQDKLQLLLEFSRELPSLPPELEEAAMEPVPECQSPLFLAVD 61
Query 65 ASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLR 124
+D VRLHFSAP EAPTTRGFASIL GLD Q A IL VP+DFY +LGL++++SPLR
Sbjct 62 TTDRGSVRLHFSAPPEAPTTRGFASILHQGLDGQSADAILDVPDDFYADLGLSSVVSPLR 121
Query 125 LRGMSAMLARIKRRLRE 141
LRGMSAMLARIKR+LRE
Sbjct 122 LRGMSAMLARIKRKLRE 138
>gi|111023247|ref|YP_706219.1| hypothetical protein RHA1_ro06284 [Rhodococcus jostii RHA1]
gi|110822777|gb|ABG98061.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=138
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/134 (74%), Positives = 108/134 (81%), Gaps = 0/134 (0%)
Query 7 LPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDAS 66
LP LAE+V DFA V G DKL+LLLEF+ EL LP+ L + AMEPVPECQSPLFL VD S
Sbjct 4 LPDSLAEIVDDFAAVDGSDKLQLLLEFSRELAPLPAELEQDAMEPVPECQSPLFLSVDDS 63
Query 67 DPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRLR 126
DP VRLHFSAPAEAPTTRGFASIL GLD AA IL+VP+DFY+ LGLA +SPLRLR
Sbjct 64 DPEHVRLHFSAPAEAPTTRGFASILHQGLDGHSAATILSVPDDFYSALGLADAVSPLRLR 123
Query 127 GMSAMLARIKRRLR 140
GMSAMLARIKR LR
Sbjct 124 GMSAMLARIKRHLR 137
>gi|226365756|ref|YP_002783539.1| SufE family protein [Rhodococcus opacus B4]
gi|226244246|dbj|BAH54594.1| SufE family protein [Rhodococcus opacus B4]
Length=138
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/134 (74%), Positives = 106/134 (80%), Gaps = 0/134 (0%)
Query 7 LPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDAS 66
LP LAE+V DFA V G DKL+LLLEF+ EL LP+ L + AMEPVPECQSPLFL VD S
Sbjct 4 LPDSLAEIVDDFAAVDGSDKLQLLLEFSRELAPLPAELEQDAMEPVPECQSPLFLSVDDS 63
Query 67 DPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRLR 126
DP VRLHFSAPAEAPTTRGFASIL GLD A IL VP+DFY+ LGLA +SPLRLR
Sbjct 64 DPEHVRLHFSAPAEAPTTRGFASILHQGLDGHSAVTILGVPDDFYSALGLADAVSPLRLR 123
Query 127 GMSAMLARIKRRLR 140
GMSAMLARIKR LR
Sbjct 124 GMSAMLARIKRHLR 137
>gi|226305610|ref|YP_002765570.1| SufE family protein [Rhodococcus erythropolis PR4]
gi|226184727|dbj|BAH32831.1| SufE family protein [Rhodococcus erythropolis PR4]
Length=138
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/136 (72%), Positives = 110/136 (81%), Gaps = 0/136 (0%)
Query 5 ASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVD 64
++LP+ LAE+V DFA V DKL LLLEF+ ELP LP+ L +SAMEPVPECQSPLFL VD
Sbjct 2 STLPSALAEIVDDFAAVGASDKLTLLLEFSRELPPLPAELEQSAMEPVPECQSPLFLSVD 61
Query 65 ASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLR 124
SD + VRL+FSAP EAPTTRGFASILA GLD A +IL VP+DFY+ LGLA +SPLR
Sbjct 62 DSDRDNVRLYFSAPPEAPTTRGFASILAQGLDGHSADEILGVPDDFYSALGLAEAVSPLR 121
Query 125 LRGMSAMLARIKRRLR 140
LRGMSAMLARIKR LR
Sbjct 122 LRGMSAMLARIKRHLR 137
>gi|229489447|ref|ZP_04383310.1| Fe-S metabolism associated SufE [Rhodococcus erythropolis SK121]
gi|229323544|gb|EEN89302.1| Fe-S metabolism associated SufE [Rhodococcus erythropolis SK121]
Length=138
Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/136 (72%), Positives = 110/136 (81%), Gaps = 0/136 (0%)
Query 5 ASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVD 64
++LP+ LAE+V DFA V DKL LLLEF+ ELP LP+ L +SAMEPVPECQSPLFL VD
Sbjct 2 SALPSALAEIVDDFAAVGASDKLTLLLEFSRELPPLPAELEQSAMEPVPECQSPLFLSVD 61
Query 65 ASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLR 124
SD + VRL+FSAP EAPTTRGFASILA GLD A +IL VP+DFY+ LGLA +SPLR
Sbjct 62 DSDRDNVRLYFSAPPEAPTTRGFASILAQGLDGHSADEILGVPDDFYSALGLAEAVSPLR 121
Query 125 LRGMSAMLARIKRRLR 140
LRGMSAMLARIKR LR
Sbjct 122 LRGMSAMLARIKRHLR 137
>gi|289571511|ref|ZP_06451738.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289545265|gb|EFD48913.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=94
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)
Query 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLF 60
MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLF
Sbjct 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLF 60
Query 61 LHVDASDPNRVRLHFSAPAEAPTTRGFASILAAG 94
LHVDASDPNRVRLHFSAPAEAPTTRGFASILAAG
Sbjct 61 LHVDASDPNRVRLHFSAPAEAPTTRGFASILAAG 94
>gi|296138762|ref|YP_003646005.1| Fe-S metabolism associated SufE [Tsukamurella paurometabola DSM
20162]
gi|296026896|gb|ADG77666.1| Fe-S metabolism associated SufE [Tsukamurella paurometabola DSM
20162]
Length=144
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/135 (72%), Positives = 108/135 (80%), Gaps = 0/135 (0%)
Query 5 ASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVD 64
A+ PA L E++ DFA V D+L LLLEF+ ELP LP HL +AMEPVPECQSPLFL VD
Sbjct 8 AATPAALQEIIDDFAAVGEPDRLELLLEFSRELPELPEHLTAAAMEPVPECQSPLFLDVD 67
Query 65 ASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLR 124
ASDP VRL+FSAP EAPTTRGFASILA GLD Q AA I AVP+DF+ LGL +++SPLR
Sbjct 68 ASDPAAVRLYFSAPPEAPTTRGFASILAQGLDGQSAAAIAAVPDDFHHALGLDSVVSPLR 127
Query 125 LRGMSAMLARIKRRL 139
LRGMSAML RIKRRL
Sbjct 128 LRGMSAMLTRIKRRL 142
>gi|262201775|ref|YP_003272983.1| Fe-S metabolism associated SufE [Gordonia bronchialis DSM 43247]
gi|262085122|gb|ACY21090.1| Fe-S metabolism associated SufE [Gordonia bronchialis DSM 43247]
Length=149
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/135 (67%), Positives = 104/135 (78%), Gaps = 0/135 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
SLP LAE+V DF + D++ LLLEFA ELP LP HL E AMEPVPECQSP+FL VDA
Sbjct 2 SLPPALAEIVDDFGALGESDRVTLLLEFAGELPDLPDHLREDAMEPVPECQSPVFLSVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
+D VRL+FSAP EAPTTRGFASIL GLD PAA IL VP DFY +LGL +++SPLRL
Sbjct 62 ADAAEVRLYFSAPREAPTTRGFASILHQGLDGAPAAAILDVPADFYYDLGLGSVVSPLRL 121
Query 126 RGMSAMLARIKRRLR 140
RGM+ ML RIK ++R
Sbjct 122 RGMAGMLGRIKNQVR 136
>gi|326382010|ref|ZP_08203703.1| Fe-S metabolism associated SufE [Gordonia neofelifaecis NRRL
B-59395]
gi|326199436|gb|EGD56617.1| Fe-S metabolism associated SufE [Gordonia neofelifaecis NRRL
B-59395]
Length=141
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/136 (67%), Positives = 107/136 (79%), Gaps = 0/136 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
+LPAPLAE+VSDFAE+ DK+ LLLEF+ ELP LP L AMEPVPECQSP+FL VDA
Sbjct 2 TLPAPLAEIVSDFAELADSDKVTLLLEFSRELPDLPESLKPEAMEPVPECQSPIFLSVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
SD + VRL FSAP EAPTTRGFASIL GLD A +I AVP DF+ +LGL+++ISPLRL
Sbjct 62 SDASAVRLFFSAPPEAPTTRGFASILHEGLDGATADEIAAVPNDFFHDLGLSSVISPLRL 121
Query 126 RGMSAMLARIKRRLRE 141
GM+ ML RIKR++ E
Sbjct 122 NGMAGMLTRIKRQVSE 137
>gi|343926707|ref|ZP_08766205.1| putative SufE family protein [Gordonia alkanivorans NBRC 16433]
gi|343763459|dbj|GAA13131.1| putative SufE family protein [Gordonia alkanivorans NBRC 16433]
Length=149
Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/136 (64%), Positives = 104/136 (77%), Gaps = 0/136 (0%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDA 65
SLP LAE+V DFA + DK+ LLLEFA+ELP LP HL + AMEPVPECQSP+FL VDA
Sbjct 2 SLPPALAEIVDDFAALGDSDKITLLLEFADELPDLPEHLQQEAMEPVPECQSPVFLSVDA 61
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
DP VRL+F+AP EAPTTRGFA+IL GLD A +IL VP DFY +LGL +++S LRL
Sbjct 62 DDPGSVRLYFTAPREAPTTRGFAAILHQGLDTASAQEILDVPSDFYYDLGLGSVVSMLRL 121
Query 126 RGMSAMLARIKRRLRE 141
RGM+ ML RIK ++R
Sbjct 122 RGMAGMLGRIKAQVRN 137
>gi|260905929|ref|ZP_05914251.1| SufE protein probably involved in Fe-S center assembly [Brevibacterium
linens BL2]
Length=162
Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/144 (54%), Positives = 99/144 (69%), Gaps = 7/144 (4%)
Query 5 ASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSPLFLH 62
+ LP LAE+V+DFAE D+L+LLLE A+ELP LP +E +EPVPECQSP+FL
Sbjct 11 SDLPESLAEIVTDFAETDSSDRLQLLLELASELPELPPRYSEHPELLEPVPECQSPIFLV 70
Query 63 VDASDPNR-----VRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLA 117
+ +P + V+LHFSAP EAPTTRGFA IL GL+ Q A +L++P D L +
Sbjct 71 TEVENPEQGDAAIVKLHFSAPPEAPTTRGFAGILHEGLNGQTAEVVLSIPSDLPLRLSMT 130
Query 118 ALISPLRLRGMSAMLARIKRRLRE 141
L+SPLRLRGMS ML+RI+R+ E
Sbjct 131 DLVSPLRLRGMSGMLSRIQRQTSE 154
>gi|324997336|ref|ZP_08118448.1| Fe-S metabolism associated SufE [Pseudonocardia sp. P1]
Length=149
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/141 (64%), Positives = 106/141 (76%), Gaps = 4/141 (2%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESA--MEPVPECQSPLFLHV 63
+LP LAE+V DFA V +D+L+LLLE + ELP LP A++A ME V ECQSPLFL V
Sbjct 7 TLPPELAELVDDFAAVGPKDRLQLLLELSQELPDLPERYADAADTMEQVHECQSPLFLTV 66
Query 64 DASDPNR--VRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALIS 121
+ D V L FSAP EAPTTRGFASI+ GLD QPAA +LAVP+DFYT+LGLA +S
Sbjct 67 EVDDGGDRPVHLFFSAPKEAPTTRGFASIMYTGLDGQPAATVLAVPDDFYTDLGLAEAVS 126
Query 122 PLRLRGMSAMLARIKRRLREA 142
PLRLRG+SAMLARIK ++R A
Sbjct 127 PLRLRGISAMLARIKNQVRAA 147
>gi|289705555|ref|ZP_06501947.1| Fe-S metabolism associated domain protein [Micrococcus luteus
SK58]
gi|289557784|gb|EFD51083.1| Fe-S metabolism associated domain protein [Micrococcus luteus
SK58]
Length=152
Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/147 (58%), Positives = 102/147 (70%), Gaps = 6/147 (4%)
Query 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHL--AESAMEPVPECQSP 58
MT ++PA LAE++ DFA V +KL LLLEF++ELPALP E+ ME V ECQ+P
Sbjct 1 MTENHAVPAALAEIIDDFAGVPDPEKLELLLEFSDELPALPERYDGHEAEMEQVVECQTP 60
Query 59 LFLHVD-ASDPNR---VRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTEL 114
LFL V+ +P VRL +AP EAPTTRGFAS+L GLD A ++L VPED T L
Sbjct 61 LFLAVELEGEPGPQAPVRLFITAPPEAPTTRGFASVLTQGLDGLSALEVLDVPEDIPTRL 120
Query 115 GLAALISPLRLRGMSAMLARIKRRLRE 141
GLA ++PLRLRGMSAML RIKR +RE
Sbjct 121 GLAKALTPLRLRGMSAMLGRIKRNVRE 147
>gi|184201053|ref|YP_001855260.1| SufE family protein [Kocuria rhizophila DC2201]
gi|183581283|dbj|BAG29754.1| SufE family protein [Kocuria rhizophila DC2201]
Length=149
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/138 (60%), Positives = 98/138 (72%), Gaps = 5/138 (3%)
Query 7 LPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSPLFLHV- 63
LP LAE+V+DF EV DKL+LLLEF+ LP LP+ L E +E V ECQSPLFL V
Sbjct 6 LPEQLAELVTDFHEVPEPDKLQLLLEFSRSLPELPARLGEHPEELEQVTECQSPLFLAVE 65
Query 64 -DASDPNR-VRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALIS 121
D + P+ V L FSAPAEAPTTRGFA+IL GLD PA+ +L VP+D GL L+S
Sbjct 66 LDGTGPDAPVSLFFSAPAEAPTTRGFAAILHEGLDGLPASQVLDVPDDLPERFGLTRLVS 125
Query 122 PLRLRGMSAMLARIKRRL 139
PLR+RGMSAML RIKR++
Sbjct 126 PLRMRGMSAMLGRIKRQI 143
>gi|239917579|ref|YP_002957137.1| SufE protein probably involved in Fe-S center assembly [Micrococcus
luteus NCTC 2665]
gi|281413935|ref|ZP_06245677.1| SufE protein probably involved in Fe-S center assembly [Micrococcus
luteus NCTC 2665]
gi|239838786|gb|ACS30583.1| SufE protein probably involved in Fe-S center assembly [Micrococcus
luteus NCTC 2665]
Length=152
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/147 (57%), Positives = 101/147 (69%), Gaps = 6/147 (4%)
Query 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHL--AESAMEPVPECQSP 58
MT ++PA LAE++ DFA V +KL LLLEF++ELPALP E+ ME V ECQ+P
Sbjct 1 MTENHAVPAALAEIIDDFAGVPDPEKLELLLEFSDELPALPERYDGHETEMEQVVECQTP 60
Query 59 LFLHVD-ASDPNR---VRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTEL 114
LFL V+ +P VRL +AP EAPTTRGFAS+L GLD A ++L VPED L
Sbjct 61 LFLAVELEGEPGPQAPVRLFIAAPPEAPTTRGFASVLTQGLDGLSALEVLDVPEDIPGRL 120
Query 115 GLAALISPLRLRGMSAMLARIKRRLRE 141
GLA ++PLRLRGMSAML RIKR +RE
Sbjct 121 GLAKALTPLRLRGMSAMLGRIKRNVRE 147
>gi|317124364|ref|YP_004098476.1| Fe-S metabolism associated SufE [Intrasporangium calvum DSM 43043]
gi|315588452|gb|ADU47749.1| Fe-S metabolism associated SufE [Intrasporangium calvum DSM 43043]
Length=151
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/148 (57%), Positives = 99/148 (67%), Gaps = 8/148 (5%)
Query 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAES--AMEPVPECQSP 58
MTA LP PLAE+ DF KL+LLLEF++ELPALP A +E V ECQ+P
Sbjct 1 MTA-TELPGPLAEIADDFRSASNDLKLQLLLEFSDELPALPERYAGQLDRLERVDECQTP 59
Query 59 LFLHVD-----ASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTE 113
LFL V+ A+ RV L F APAE+PTTRGFA IL AGLD ++LAVP+D
Sbjct 60 LFLVVEVEQSSAAAERRVHLFFDAPAESPTTRGFAGILHAGLDGLSPEEVLAVPDDAPMR 119
Query 114 LGLAALISPLRLRGMSAMLARIKRRLRE 141
GLA +SPLRLRGM+AMLARIKR++RE
Sbjct 120 FGLAEAVSPLRLRGMAAMLARIKRQVRE 147
>gi|331699013|ref|YP_004335252.1| Fe-S metabolism associated SufE [Pseudonocardia dioxanivorans
CB1190]
gi|326953702|gb|AEA27399.1| Fe-S metabolism associated SufE [Pseudonocardia dioxanivorans
CB1190]
Length=148
Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/143 (61%), Positives = 105/143 (74%), Gaps = 7/143 (4%)
Query 5 ASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESA--MEPVPECQSPLFLH 62
A LP LAE+V DF+ V +D+L+LLLE + ELP LP A++A ME V ECQSPLFL
Sbjct 2 ADLPPRLAELVEDFSAVGPKDRLQLLLELSQELPDLPERYADAADSMEQVHECQSPLFLA 61
Query 63 VDASD----PNR-VRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLA 117
V+ D P+R V L FSAP EAPTTRGFASI+ GLD + AAD+LAVP+DFY LGL
Sbjct 62 VEVEDGAAAPDRPVHLFFSAPPEAPTTRGFASIMHTGLDGESAADVLAVPDDFYVALGLG 121
Query 118 ALISPLRLRGMSAMLARIKRRLR 140
+SPLRLRGM+AMLARIK ++R
Sbjct 122 QAVSPLRLRGMAAMLARIKNQVR 144
>gi|116670226|ref|YP_831159.1| Fe-S metabolism associated SufE [Arthrobacter sp. FB24]
gi|116610335|gb|ABK03059.1| Fe-S metabolism associated SufE [Arthrobacter sp. FB24]
Length=153
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/141 (54%), Positives = 96/141 (69%), Gaps = 7/141 (4%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSPLFLHV 63
+LPA LAE+V DF + ++L+LLLEF+ LP LP L + +E V ECQSPLFL +
Sbjct 5 ALPATLAEIVDDFQALTEPERLQLLLEFSQGLPELPDRLKDHPELLEQVVECQSPLFLTI 64
Query 64 -----DASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAA 118
DA P+ VRL+F AP EAPTTRGFA +L GLD A +ILAVP+D LGL
Sbjct 65 ETEKNDAGSPDSVRLYFKAPPEAPTTRGFAGVLHEGLDGLTAPEILAVPDDMPELLGLTR 124
Query 119 LISPLRLRGMSAMLARIKRRL 139
I+PLR+RGM+AML RIKR++
Sbjct 125 AITPLRMRGMTAMLGRIKRKV 145
>gi|257067568|ref|YP_003153823.1| SufE protein probably involved in Fe-S center assembly [Brachybacterium
faecium DSM 4810]
gi|256558386|gb|ACU84233.1| SufE protein probably involved in Fe-S center assembly [Brachybacterium
faecium DSM 4810]
Length=150
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/146 (51%), Positives = 94/146 (65%), Gaps = 5/146 (3%)
Query 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSP 58
M+ +LP AE+ DF + G+D+L+LLLEF+ LPALP AE +EPVPECQSP
Sbjct 1 MSESTALPEAFAEIAEDFHALSGRDRLQLLLEFSQGLPALPERYAEHPELLEPVPECQSP 60
Query 59 LFLHVDASDPNR---VRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELG 115
+FL + R L FSAP EAPTTRGFA+ILA LD + +++ PE LG
Sbjct 61 IFLVTEVEGTGRDATAHLFFSAPPEAPTTRGFAAILAEALDGRTVGEVIDTPESVTGALG 120
Query 116 LAALISPLRLRGMSAMLARIKRRLRE 141
LA ++SPLRL GM+ ML RIKR+L E
Sbjct 121 LAEVVSPLRLNGMAGMLVRIKRQLAE 146
>gi|170782041|ref|YP_001710373.1| hypothetical protein CMS_1650 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156609|emb|CAQ01760.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length=146
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/143 (56%), Positives = 106/143 (75%), Gaps = 3/143 (2%)
Query 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSP 58
MT LPA LAE+ DF ++ +D+L LLL+F+NELPALP A+ +E V ECQSP
Sbjct 1 MTDAPGLPAALAEIRDDFLALEQRDRLLLLLDFSNELPALPPRYADHPDLLERVEECQSP 60
Query 59 LFLHVDASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAA 118
+F+ V+ D + V +H APAEAPT+RGFASILA GLD PA ++LAVP+D+ + +GL A
Sbjct 61 VFMFVEVVDGD-VHVHAQAPAEAPTSRGFASILAQGLDGLPADEVLAVPDDYPSTIGLDA 119
Query 119 LISPLRLRGMSAMLARIKRRLRE 141
+SPLR+RGM+AML R+KR++RE
Sbjct 120 AVSPLRMRGMTAMLGRVKRQVRE 142
>gi|295396291|ref|ZP_06806466.1| SufE protein [Brevibacterium mcbrellneri ATCC 49030]
gi|294970880|gb|EFG46780.1| SufE protein [Brevibacterium mcbrellneri ATCC 49030]
Length=150
Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/146 (54%), Positives = 103/146 (71%), Gaps = 5/146 (3%)
Query 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAES--AMEPVPECQSP 58
MT A +P+ L ++V DFA+ + +L LLLEF++E+P LP A++ +EPVPECQSP
Sbjct 1 MTLSADVPSELHDIVRDFAQTPEEQRLELLLEFSDEIPELPQRYADNPDLLEPVPECQSP 60
Query 59 LFL--HVDASDPN-RVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELG 115
+F VD + + RV L FSAPAEAPTTRGFA IL GLD A + AVPEDF +L
Sbjct 61 IFFIAEVDGTGEDARVSLFFSAPAEAPTTRGFAGILTEGLDGATARQVQAVPEDFALQLS 120
Query 116 LAALISPLRLRGMSAMLARIKRRLRE 141
L +L+SPLRL GM+ MLARI+R+++E
Sbjct 121 LTSLVSPLRLNGMTGMLARIQRQVKE 146
>gi|220912425|ref|YP_002487734.1| Fe-S metabolism associated SufE [Arthrobacter chlorophenolicus
A6]
gi|219859303|gb|ACL39645.1| Fe-S metabolism associated SufE [Arthrobacter chlorophenolicus
A6]
Length=155
Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/147 (52%), Positives = 96/147 (66%), Gaps = 8/147 (5%)
Query 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSP 58
M +LP+ LA +V DF + ++L+LLLEF+ LP LP L + +E V ECQSP
Sbjct 1 MMTTQALPSALAAIVDDFQALSEPERLQLLLEFSEGLPELPERLTDHPELLEQVVECQSP 60
Query 59 LFLHV----DASDP--NRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYT 112
LFL + D SD VRL F APAEAPTTRGFA +L GLD AA+IL+VP+D
Sbjct 61 LFLTIETEKDGSDGPGTAVRLFFKAPAEAPTTRGFAGVLHEGLDGLSAAEILSVPDDMPE 120
Query 113 ELGLAALISPLRLRGMSAMLARIKRRL 139
LGL I+PLR+RGM+AML RIKR++
Sbjct 121 LLGLTRAITPLRMRGMTAMLGRIKRKV 147
>gi|148272848|ref|YP_001222409.1| hypothetical protein CMM_1666 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830778|emb|CAN01718.1| conserved hypothetical protein putatively involved in Fe-S assembly
[Clavibacter michiganensis subsp. michiganensis NCPPB
382]
Length=146
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/143 (54%), Positives = 104/143 (73%), Gaps = 3/143 (2%)
Query 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSP 58
MT LPA LAE+ DF ++ +D+L LLL+F+NELP LP+ A+ +E V ECQSP
Sbjct 1 MTGTPELPAALAEIRDDFLALEQRDRLLLLLDFSNELPELPARYADHPDLLERVEECQSP 60
Query 59 LFLHVDASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAA 118
+F+ V+ + V +H APAEAPT+RGFASILA GLD PA +LAVP+D+ + +GL A
Sbjct 61 VFMFVEVVGGD-VHVHAQAPAEAPTSRGFASILAQGLDGLPADVVLAVPDDYPSTIGLDA 119
Query 119 LISPLRLRGMSAMLARIKRRLRE 141
+SPLR+RGM+AML R+KR++RE
Sbjct 120 AVSPLRMRGMTAMLGRVKRQVRE 142
>gi|297623025|ref|YP_003704459.1| Fe-S metabolism associated SufE [Truepera radiovictrix DSM 17093]
gi|297164205|gb|ADI13916.1| Fe-S metabolism associated SufE [Truepera radiovictrix DSM 17093]
Length=144
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/138 (48%), Positives = 93/138 (68%), Gaps = 2/138 (1%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSPLFLHV 63
S+PA L +V F Q +L+LLLE++ ++P LP + + AME V ECQ+P F+
Sbjct 2 SVPAKLQTIVESFQSAPKQLRLQLLLEYSKKVPPLPEYFRDHHDAMERVHECQTPFFIAT 61
Query 64 DASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPL 123
+ D RV HF AP EAPTTRGFA +L+ GL+ ++LA P++FY L L +ISPL
Sbjct 62 EFPDEARVVFHFDAPPEAPTTRGFAGVLSEGLNGLSPDEVLATPDNFYEALKLGEVISPL 121
Query 124 RLRGMSAMLARIKRRLRE 141
RLRGMSA+++R+KR++RE
Sbjct 122 RLRGMSAIMSRLKRQVRE 139
>gi|119961245|ref|YP_947565.1| sufE protein [Arthrobacter aurescens TC1]
gi|119948104|gb|ABM07015.1| sufE protein [Arthrobacter aurescens TC1]
Length=159
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/141 (52%), Positives = 94/141 (67%), Gaps = 7/141 (4%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSPLFLHV 63
+LP LAE+V DF + D+L+LLLEF+ LP LP L + +E V ECQSPLFL +
Sbjct 11 TLPTALAEIVDDFQALTEPDRLQLLLEFSRGLPELPERLKDHPELLEQVVECQSPLFLTI 70
Query 64 DA-SDPNR----VRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAA 118
++ +P+ RL F AP EAPTTRGFA +L GLD A +ILAVP+D LGL
Sbjct 71 ESEKNPDGGARAYRLFFKAPQEAPTTRGFAGVLHEGLDGLTAQEILAVPDDMPELLGLTR 130
Query 119 LISPLRLRGMSAMLARIKRRL 139
I+PLR+RGM+AML RIKR++
Sbjct 131 AITPLRMRGMTAMLGRIKRKV 151
>gi|152967024|ref|YP_001362808.1| Fe-S metabolism associated SufE [Kineococcus radiotolerans SRS30216]
gi|151361541|gb|ABS04544.1| Fe-S metabolism associated SufE [Kineococcus radiotolerans SRS30216]
Length=153
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Query 5 ASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAES--AMEPVPECQSPLFLH 62
A LP +AE+V DF + +++L+LLLEF+ L LP ME V ECQSP+F+
Sbjct 11 AGLPPAMAEIVEDFQALPDRERLQLLLEFSQGLRPLPPRFEGQPEKMERVDECQSPVFIT 70
Query 63 VDASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISP 122
V+ D V LH SAP EAPTTRGFA +L GL+ PAA +L +P D LGL +SP
Sbjct 71 VEVDDAQAVHLHVSAPPEAPTTRGFAGVLQEGLEGLPAAVVLDLPADVCHRLGLEQAVSP 130
Query 123 LRLRGMSAMLARIKRRLREA 142
LR+RGM+ MLAR+KR++R A
Sbjct 131 LRMRGMTGMLARVKRQVRVA 150
>gi|229821132|ref|YP_002882658.1| Fe-S metabolism associated SufE [Beutenbergia cavernae DSM 12333]
gi|229567045|gb|ACQ80896.1| Fe-S metabolism associated SufE [Beutenbergia cavernae DSM 12333]
Length=151
Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/143 (51%), Positives = 98/143 (69%), Gaps = 3/143 (2%)
Query 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSP 58
++A +LP LA + DF + +D+L+LLLEF+ LP LP+ AE +EPVPECQSP
Sbjct 6 LSASPALPGSLAAIQEDFLALGVKDRLQLLLEFSQGLPDLPARYAEHPELLEPVPECQSP 65
Query 59 LFLHVDASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAA 118
+ + V+ D + VR SAP APT+RGFA+ILA GLD A++LA+P DF LGL
Sbjct 66 ISVFVEV-DGDHVRFFASAPPGAPTSRGFAAILAEGLDGLTTAEVLAIPADFPHTLGLDE 124
Query 119 LISPLRLRGMSAMLARIKRRLRE 141
++PLRLRGM A+LAR +R++RE
Sbjct 125 AVTPLRLRGMDALLARAQRQVRE 147
>gi|325963035|ref|YP_004240941.1| SufE protein probably involved in Fe-S center assembly [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469122|gb|ADX72807.1| SufE protein probably involved in Fe-S center assembly [Arthrobacter
phenanthrenivorans Sphe3]
Length=146
Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/138 (51%), Positives = 91/138 (66%), Gaps = 5/138 (3%)
Query 7 LPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSPLFLHVD 64
+P LA +V DF + ++L+LLLEF+ LP LP L + +E V ECQSPLFL ++
Sbjct 1 MPTALAAIVDDFQALSEPERLQLLLEFSQGLPELPERLRDHPELLEQVVECQSPLFLTIE 60
Query 65 ASD---PNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALIS 121
+ VRL F APAEAPTTRGFA +L GLD A +IL+VP+D LGL I+
Sbjct 61 TEEVGPATEVRLFFKAPAEAPTTRGFAGVLHEGLDGLTAEEILSVPDDMPELLGLTRAIT 120
Query 122 PLRLRGMSAMLARIKRRL 139
PLR+RGM+AML RIKR++
Sbjct 121 PLRMRGMTAMLGRIKRKV 138
>gi|15805252|ref|NP_293940.1| hypothetical protein DR_0216 [Deinococcus radiodurans R1]
gi|6457883|gb|AAF09799.1|AE001883_5 conserved hypothetical protein [Deinococcus radiodurans R1]
Length=147
Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/146 (47%), Positives = 91/146 (63%), Gaps = 3/146 (2%)
Query 1 MTAPAS-LPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESA--MEPVPECQS 57
MTAPA+ LP L +V F V +L+ LLE++ +LP LP AE ++PVPEC S
Sbjct 1 MTAPAAPLPEKLQNIVGMFKTVPKAMRLQALLEYSRKLPPLPEKYAEHPEFLKPVPECTS 60
Query 58 PLFLHVDASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLA 117
P FL + D RV LHF P +APT RG+A IL L + IL VP++FY ++GL
Sbjct 61 PFFLVTEQDDAGRVNLHFKVPEDAPTVRGYAGILHEALSGETPETILNVPDNFYMDMGLT 120
Query 118 ALISPLRLRGMSAMLARIKRRLREAD 143
LI+P+RLRGM A+L R+KR + A+
Sbjct 121 ELITPMRLRGMGAILMRLKRDVAGAE 146
>gi|269955711|ref|YP_003325500.1| Fe-S metabolism associated SufE [Xylanimonas cellulosilytica
DSM 15894]
gi|269304392|gb|ACZ29942.1| Fe-S metabolism associated SufE [Xylanimonas cellulosilytica
DSM 15894]
Length=148
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/143 (51%), Positives = 93/143 (66%), Gaps = 3/143 (2%)
Query 1 MTAPASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAES--AMEPVPECQSP 58
MT PA LPA LAE+ F E+ +D+L+LLLEFA ELP LP+ A + +E V ECQSP
Sbjct 1 MTEPALLPAALAEIREGFLELGERDRLQLLLEFAGELPELPARYAAAPALLEKVEECQSP 60
Query 59 LFLHVDASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAA 118
+ + D + V + +AP EAPTTRGFASILA GL +L VP+D+ +GL
Sbjct 61 VRAFAEIED-DGVHFYATAPQEAPTTRGFASILAQGLTGLTPQQVLDVPDDYAMTIGLNR 119
Query 119 LISPLRLRGMSAMLARIKRRLRE 141
+SPLRL GM+ ML R KR++RE
Sbjct 120 AVSPLRLNGMTGMLTRAKRQVRE 142
>gi|88856893|ref|ZP_01131545.1| hypothetical protein A20C1_03563 [marine actinobacterium PHSC20C1]
gi|88813861|gb|EAR23731.1| hypothetical protein A20C1_03563 [marine actinobacterium PHSC20C1]
Length=145
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/137 (49%), Positives = 93/137 (68%), Gaps = 3/137 (2%)
Query 6 SLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSPLFLHV 63
+P LAE+ DF ++ +D+L+LLLEFANELP LP + E V ECQSP+F+ +
Sbjct 5 QIPTQLAEIRDDFLGLELRDRLQLLLEFANELPELPERYRDHPDLFERVEECQSPVFIFI 64
Query 64 DASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPL 123
+ ++ + V ++ +AP EAPTTRGFASIL GL ++L + +DF LGL+ +SPL
Sbjct 65 EVAN-DTVHMYATAPPEAPTTRGFASILVQGLSGLSTREVLELSDDFPQSLGLSRAVSPL 123
Query 124 RLRGMSAMLARIKRRLR 140
RLRGM+ MLAR KR++R
Sbjct 124 RLRGMTGMLARAKRQIR 140
>gi|308177759|ref|YP_003917165.1| SufE-like protein [Arthrobacter arilaitensis Re117]
gi|307745222|emb|CBT76194.1| SufE-like protein [Arthrobacter arilaitensis Re117]
Length=146
Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/141 (57%), Positives = 98/141 (70%), Gaps = 4/141 (2%)
Query 5 ASLPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAE--SAMEPVPECQSPLFL- 61
+ +P L E+V +F EV D+L LLLE++ ELP LP+ LA+ E V ECQSPLFL
Sbjct 2 SHVPNELNEIVEEFIEVPEADRLELLLEYSRELPELPARLADHPELFEQVVECQSPLFLV 61
Query 62 -HVDASDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALI 120
V A + V L FSAP EAPTTRGFAS+LAAGLD AA ILAVP+D +LGL +
Sbjct 62 VEVGAEANHTVNLFFSAPPEAPTTRGFASVLAAGLDGADAASILAVPDDMPQQLGLTRAL 121
Query 121 SPLRLRGMSAMLARIKRRLRE 141
SPLR+RGM+AML RIKR++ E
Sbjct 122 SPLRMRGMTAMLGRIKRQISE 142
>gi|302864553|ref|YP_003833190.1| Fe-S metabolism associated SufE [Micromonospora aurantiaca ATCC
27029]
gi|315500846|ref|YP_004079733.1| fe-s metabolism associated sufe [Micromonospora sp. L5]
gi|302567412|gb|ADL43614.1| Fe-S metabolism associated SufE [Micromonospora aurantiaca ATCC
27029]
gi|315407465|gb|ADU05582.1| Fe-S metabolism associated SufE [Micromonospora sp. L5]
Length=141
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/135 (49%), Positives = 86/135 (64%), Gaps = 0/135 (0%)
Query 7 LPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLAESAMEPVPECQSPLFLHVDAS 66
+P LAE+V +FA L +LLEFA+ +P LP + +E VPECQ+ FL + +
Sbjct 4 MPTKLAEIVDEFAAAPRDVVLEMLLEFADVIPPLPEGVNREELEQVPECQTAFFLRAEVN 63
Query 67 DPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRLR 126
V F P EAPTTR FA ILA GL A ++LAVP+D Y +GLA ISPLR+R
Sbjct 64 ADKTVSTVFDCPPEAPTTRAFAGILAEGLAGASAEEVLAVPDDLYQRMGLAQAISPLRVR 123
Query 127 GMSAMLARIKRRLRE 141
G +A+LAR+KR++RE
Sbjct 124 GGTAILARLKRQVRE 138
>gi|238061933|ref|ZP_04606642.1| iron-sulfur metabolism associated protein sufE [Micromonospora
sp. ATCC 39149]
gi|237883744|gb|EEP72572.1| iron-sulfur metabolism associated protein sufE [Micromonospora
sp. ATCC 39149]
Length=142
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/136 (50%), Positives = 87/136 (64%), Gaps = 1/136 (0%)
Query 7 LPAPLAEVVSDFAEVQGQDKLRLLLEFANELPALPSHLA-ESAMEPVPECQSPLFLHVDA 65
+P LAE+V +FA + L +LLE+A+ +P LP LA ME VPECQ+ FL +
Sbjct 4 MPTKLAEIVDEFAAAPRELVLEMLLEYADVIPPLPEELAGREGMEQVPECQTAFFLRAEV 63
Query 66 SDPNRVRLHFSAPAEAPTTRGFASILAAGLDEQPAADILAVPEDFYTELGLAALISPLRL 125
+ V F P EAPTTR FA ILA GL A + LAVP+D Y +GLA ISPLR+
Sbjct 64 NPDRTVATWFDCPPEAPTTRAFAGILAEGLAGASAEETLAVPDDLYQRMGLAQAISPLRV 123
Query 126 RGMSAMLARIKRRLRE 141
RG +A+LAR+KR++RE
Sbjct 124 RGGTAILARLKRQVRE 139
Lambda K H
0.319 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129250525032
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40