BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3311 Length=420 Score E Sequences producing significant alignments: (Bits) Value gi|289555589|ref|ZP_06444799.1| conserved hypothetical protein [... 837 0.0 gi|15610447|ref|NP_217828.1| hypothetical protein Rv3311 [Mycoba... 836 0.0 gi|339633318|ref|YP_004724960.1| hypothetical protein MAF_33220 ... 835 0.0 gi|340628293|ref|YP_004746745.1| hypothetical protein MCAN_33341... 827 0.0 gi|15842902|ref|NP_337939.1| hypothetical protein MT3410 [Mycoba... 762 0.0 gi|15827297|ref|NP_301560.1| hypothetical protein ML0703 [Mycoba... 652 0.0 gi|296168870|ref|ZP_06850542.1| conserved hypothetical protein [... 648 0.0 gi|342861534|ref|ZP_08718181.1| hypothetical protein MCOL_21716 ... 646 0.0 gi|254820231|ref|ZP_05225232.1| hypothetical protein MintA_09901... 640 0.0 gi|183981237|ref|YP_001849528.1| hypothetical protein MMAR_1215 ... 622 4e-176 gi|118618137|ref|YP_906469.1| hypothetical protein MUL_2677 [Myc... 622 4e-176 gi|41409531|ref|NP_962367.1| hypothetical protein MAP3433 [Mycob... 622 4e-176 gi|118465050|ref|YP_883427.1| hypothetical protein MAV_4288 [Myc... 622 5e-176 gi|336459601|gb|EGO38536.1| hypothetical protein MAPs_01210 [Myc... 619 4e-175 gi|254776722|ref|ZP_05218238.1| hypothetical protein MaviaA2_189... 616 2e-174 gi|240171326|ref|ZP_04749985.1| hypothetical protein MkanA1_1858... 615 5e-174 gi|333991778|ref|YP_004524392.1| hypothetical protein JDM601_313... 559 4e-157 gi|118470513|ref|YP_886060.1| hypothetical protein MSMEG_1684 [M... 543 3e-152 gi|145225418|ref|YP_001136096.1| hypothetical protein Mflv_4840 ... 539 4e-151 gi|120402599|ref|YP_952428.1| hypothetical protein Mvan_1593 [My... 539 4e-151 gi|315445766|ref|YP_004078645.1| hypothetical protein Mspyr1_425... 536 2e-150 gi|108798205|ref|YP_638402.1| hypothetical protein Mmcs_1234 [My... 531 6e-149 gi|126433862|ref|YP_001069553.1| hypothetical protein Mjls_1260 ... 523 3e-146 gi|289752007|ref|ZP_06511385.1| conserved hypothetical protein [... 505 6e-141 gi|54022921|ref|YP_117163.1| hypothetical protein nfa9540 [Nocar... 382 8e-104 gi|226365720|ref|YP_002783503.1| hypothetical protein ROP_63110 ... 379 5e-103 gi|111023215|ref|YP_706187.1| hypothetical protein RHA1_ro06252 ... 375 9e-102 gi|343926660|ref|ZP_08766158.1| hypothetical protein GOALK_067_0... 373 4e-101 gi|333921526|ref|YP_004495107.1| hypothetical protein AS9A_3869 ... 369 8e-100 gi|226305536|ref|YP_002765496.1| hypothetical protein RER_20490 ... 364 2e-98 gi|229489356|ref|ZP_04383219.1| conserved hypothetical protein [... 363 4e-98 gi|312140767|ref|YP_004008103.1| hypothetical protein REQ_34290 ... 354 2e-95 gi|325675593|ref|ZP_08155277.1| hypothetical protein HMPREF0724_... 352 6e-95 gi|326381954|ref|ZP_08203647.1| hypothetical protein SCNU_03382 ... 348 1e-93 gi|319949452|ref|ZP_08023512.1| hypothetical protein ES5_08421 [... 317 2e-84 gi|257054616|ref|YP_003132448.1| hypothetical protein Svir_05470... 315 7e-84 gi|300782795|ref|YP_003763086.1| hypothetical protein AMED_0864 ... 313 3e-83 gi|134103002|ref|YP_001108663.1| hypothetical protein SACE_6570 ... 308 8e-82 gi|302524173|ref|ZP_07276515.1| conserved hypothetical protein [... 305 1e-80 gi|256380432|ref|YP_003104092.1| hypothetical protein Amir_6445 ... 303 4e-80 gi|467184|gb|AAA17342.1| L308_F2_61 [Mycobacterium leprae] 287 3e-75 gi|331699043|ref|YP_004335282.1| hypothetical protein Psed_5295 ... 284 2e-74 gi|324999777|ref|ZP_08120889.1| hypothetical protein PseP1_13461... 280 2e-73 gi|305679785|ref|ZP_07402595.1| conserved hypothetical protein [... 280 4e-73 gi|225020585|ref|ZP_03709777.1| hypothetical protein CORMATOL_00... 277 2e-72 gi|467179|gb|AAA17337.1| L308_F1_17 [Mycobacterium leprae] 276 3e-72 gi|169630748|ref|YP_001704397.1| hypothetical protein MAB_3669 [... 271 2e-70 gi|227486994|ref|ZP_03917310.1| conserved hypothetical protein [... 263 4e-68 gi|227541844|ref|ZP_03971893.1| conserved hypothetical protein [... 261 2e-67 gi|258651557|ref|YP_003200713.1| hypothetical protein Namu_1321 ... 259 4e-67 >gi|289555589|ref|ZP_06444799.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289440221|gb|EFD22714.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] Length=423 Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/420 (100%), Positives = 420/420 (100%), Gaps = 0/420 (0%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE Sbjct 4 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 63 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG Sbjct 64 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 123 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS Sbjct 124 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 183 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR Sbjct 184 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 243 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD Sbjct 244 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 303 Query 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI Sbjct 304 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 363 Query 361 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE 420 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE Sbjct 364 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE 423 >gi|15610447|ref|NP_217828.1| hypothetical protein Rv3311 [Mycobacterium tuberculosis H37Rv] gi|31794491|ref|NP_856984.1| hypothetical protein Mb3339 [Mycobacterium bovis AF2122/97] gi|121639234|ref|YP_979458.1| hypothetical protein BCG_3376 [Mycobacterium bovis BCG str. Pasteur 1173P2] 75 more sequence titles Length=420 Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/420 (100%), Positives = 420/420 (100%), Gaps = 0/420 (0%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE Sbjct 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG Sbjct 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS Sbjct 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR Sbjct 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD Sbjct 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 Query 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI Sbjct 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 Query 361 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE 420 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE Sbjct 361 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE 420 >gi|339633318|ref|YP_004724960.1| hypothetical protein MAF_33220 [Mycobacterium africanum GM041182] gi|339332674|emb|CCC28392.1| conserved hypothetical protein [Mycobacterium africanum GM041182] Length=420 Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/420 (99%), Positives = 420/420 (100%), Gaps = 0/420 (0%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE Sbjct 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG Sbjct 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 S+CELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS Sbjct 121 SMCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR Sbjct 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD Sbjct 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 Query 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI Sbjct 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 Query 361 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE 420 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE Sbjct 361 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE 420 >gi|340628293|ref|YP_004746745.1| hypothetical protein MCAN_33341 [Mycobacterium canettii CIPT 140010059] gi|340006483|emb|CCC45665.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=420 Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/420 (99%), Positives = 417/420 (99%), Gaps = 0/420 (0%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE Sbjct 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG Sbjct 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAG+KRWNSIAEVIGRSWDDVLAAIDEIIS Sbjct 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGHKRWNSIAEVIGRSWDDVLAAIDEIIS 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR Sbjct 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD Sbjct 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 Query 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGL DDFADGPDAVDREQLDLAVELLRDI Sbjct 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLADDFADGPDAVDREQLDLAVELLRDI 360 Query 361 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE 420 GDYSEDSAVDKALETTRPLGQLVAYVLDP SVGKPT PYAAAVREWEKLERFVESRLRRE Sbjct 361 GDYSEDSAVDKALETTRPLGQLVAYVLDPDSVGKPTTPYAAAVREWEKLERFVESRLRRE 420 >gi|15842902|ref|NP_337939.1| hypothetical protein MT3410 [Mycobacterium tuberculosis CDC1551] gi|13883235|gb|AAK47753.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length=431 Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/420 (99%), Positives = 419/420 (99%), Gaps = 1/420 (0%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE Sbjct 13 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 72 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG Sbjct 73 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 132 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS Sbjct 133 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 192 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR Sbjct 193 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 252 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 DFWLQVGIDPIQIMTGTATFY LRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD Sbjct 253 DFWLQVGIDPIQIMTGTATFY-LRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 311 Query 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI Sbjct 312 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 371 Query 361 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE 420 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE Sbjct 372 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE 431 >gi|15827297|ref|NP_301560.1| hypothetical protein ML0703 [Mycobacterium leprae TN] gi|221229775|ref|YP_002503191.1| hypothetical protein MLBr_00703 [Mycobacterium leprae Br4923] gi|13092846|emb|CAC30212.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932882|emb|CAR70797.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=423 Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/423 (78%), Positives = 368/423 (87%), Gaps = 3/423 (0%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 MVADLVPI LSL AGDRYT+WAPRWRD GDEWEAFLGKDD+LY E+V+DLVAFVRTD++ Sbjct 1 MVADLVPICLSLPAGDRYTVWAPRWRDGGDEWEAFLGKDDNLYACETVADLVAFVRTDSD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHPAW+DLT HAH L+P+EDNQFDLVVVEEL+AEKPTAESV LAA+LAIV++IG Sbjct 61 NDLVDHPAWKDLTSVHAHKLDPSEDNQFDLVVVEELVAEKPTAESVTTLAATLAIVASIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCEL AVSKFFNGNP LG VSGG+EHFTG+AG +RWNSIAE+IGRSWDDVL+AID++IS Sbjct 121 SVCELPAVSKFFNGNPSLGAVSGGIEHFTGRAGQRRWNSIAEIIGRSWDDVLSAIDKVIS 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVE-ATQDTQEAAESDD--EEADAPGDSVVLG 237 TP V+A +S K A+ELAEEP E + + A T +A SDD +E+ GD+VVLG Sbjct 181 TPRVNAAMSAKAADELAEEPVEPEVEPDDEDGADSATAQANNSDDTEDESRTAGDTVVLG 240 Query 238 GDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEH 297 D+DFWLQVGIDP++IMTG TFYTLRCYLDD PIFLGRNGRISVF SERALARYLADEH Sbjct 241 SDKDFWLQVGIDPVRIMTGAGTFYTLRCYLDDHPIFLGRNGRISVFSSERALARYLADEH 300 Query 298 DHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELL 357 DHDLS LSTYDDIRTAATDGSLA+ +TDDN+YVLSGL DD ADGPDAVDR+QLDLAVELL Sbjct 301 DHDLSYLSTYDDIRTAATDGSLAIDITDDNIYVLSGLSDDLADGPDAVDRDQLDLAVELL 360 Query 358 RDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRL 417 RDIG YSE+SAVD ALET RPLG+LVA+VL P +V KP APY+AAVREWEKLE+FVESRL Sbjct 361 RDIGQYSEESAVDTALETNRPLGKLVAHVLSPSAVDKPVAPYSAAVREWEKLEQFVESRL 420 Query 418 RRE 420 R E Sbjct 421 RLE 423 >gi|296168870|ref|ZP_06850542.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896487|gb|EFG76137.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=436 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/437 (76%), Positives = 368/437 (85%), Gaps = 18/437 (4%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M ADLVPIRLSLS GDRYT+WAPRWRDAGDEWEAFLGKD+DL+ F+S++DLVAFVR+DT+ Sbjct 1 MAADLVPIRLSLSDGDRYTVWAPRWRDAGDEWEAFLGKDEDLFVFDSLADLVAFVRSDTD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHPAW+DLT AHAH PAED QFDLV VEEL++EKPT ESV ALA +LA+VS++G Sbjct 61 NDLVDHPAWKDLTSAHAHTFEPAEDRQFDLVAVEELVSEKPTEESVTALARTLALVSSLG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCEL AVSKFFNGNP LGTVSGG++HFTGKAG KRWN+I E+IGR WDDVL AID I++ Sbjct 121 SVCELTAVSKFFNGNPTLGTVSGGIDHFTGKAGLKRWNAIGEIIGRGWDDVLGAIDGIVT 180 Query 181 TPEVDAELSEKVAEELAEEPEGAE-----------------EVAAEVEATQDTQEAAESD 223 TPEVDA+LS K A+ELAEE E + E AE EA D AAE D Sbjct 181 TPEVDAKLSAKAADELAEEREDEDTGDAEDADDTEDTENAEEPDAEAEAESDEPVAAE-D 239 Query 224 DEEADAPGDSVVLGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVF 283 DEE A GD+V+LG D DFW+QVGIDPI+IMT + TFYTLRCYLDDRPIFLGRNGRISVF Sbjct 240 DEEPRAAGDTVILGSDEDFWVQVGIDPIRIMTSSGTFYTLRCYLDDRPIFLGRNGRISVF 299 Query 284 GSERALARYLADEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPD 343 GSERALARYLADEHDHDL+DLSTYDDIRTAATDGSL V VT+DNVYVLSGL DD ADGPD Sbjct 300 GSERALARYLADEHDHDLADLSTYDDIRTAATDGSLEVEVTEDNVYVLSGLADDIADGPD 359 Query 344 AVDREQLDLAVELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAV 403 AVDREQLDLAVELLRDIGDYSE+ VDKALE RPLG+LVAYVL+P SVGKP+APYA AV Sbjct 360 AVDREQLDLAVELLRDIGDYSEEGTVDKALEPGRPLGKLVAYVLEPGSVGKPSAPYAQAV 419 Query 404 REWEKLERFVESRLRRE 420 REWE LE+FV+ RLRRE Sbjct 420 REWENLEQFVDGRLRRE 436 >gi|342861534|ref|ZP_08718181.1| hypothetical protein MCOL_21716 [Mycobacterium colombiense CECT 3035] gi|342131023|gb|EGT84312.1| hypothetical protein MCOL_21716 [Mycobacterium colombiense CECT 3035] Length=432 Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/432 (77%), Positives = 370/432 (86%), Gaps = 12/432 (2%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 MVADLVPIRLSLS GDRYT+WAPRWRD+GDEWEAFLGKD+DL+GF SV+DLVAFVR+D + Sbjct 1 MVADLVPIRLSLSEGDRYTVWAPRWRDSGDEWEAFLGKDEDLFGFASVADLVAFVRSDDD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDL DHPAW++L AHAH PA+D QFDLV VEEL+AEKPT ESVAALA +L+IVS+IG Sbjct 61 NDLTDHPAWKELRAAHAHAFLPADDKQFDLVAVEELVAEKPTEESVAALAGTLSIVSSIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCELAAVSKFFNGNP LGTVSGG+EHFTGKAG KRWN+IAEVIGRSWDDVLAAID I+S Sbjct 121 SVCELAAVSKFFNGNPSLGTVSGGIEHFTGKAGAKRWNAIAEVIGRSWDDVLAAIDGIVS 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAA------------EVEATQDTQEAAESDDEEAD 228 TPEVDA+LS+K A+ELAEE E E E +D E ++ DE A Sbjct 181 TPEVDAKLSDKAADELAEEREDDEPEEDTGTEDAVAEEAPEETEDEDAAEDQDTGDEPAR 240 Query 229 APGDSVVLGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERA 288 A GD+VVLG D+DFWLQVGIDPI+IMT + TFYTLRCYLDD+PIFLGRNGRISVF SERA Sbjct 241 ATGDTVVLGSDKDFWLQVGIDPIRIMTSSGTFYTLRCYLDDQPIFLGRNGRISVFTSERA 300 Query 289 LARYLADEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDRE 348 LARYLADEHDHDLSDLSTYDDIRTAATDGSLA+ +TDDN+YVLSGL DD ADGPDAVDRE Sbjct 301 LARYLADEHDHDLSDLSTYDDIRTAATDGSLAIEITDDNIYVLSGLADDLADGPDAVDRE 360 Query 349 QLDLAVELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEK 408 QL+LAVE+LRDIGDYSED AVDKAL+T +PLG+LVA VL+P SV KP+ PYAAAVREWEK Sbjct 361 QLELAVEVLRDIGDYSEDPAVDKALDTGKPLGKLVAAVLEPDSVTKPSPPYAAAVREWEK 420 Query 409 LERFVESRLRRE 420 LE+FV+ RLRRE Sbjct 421 LEQFVDGRLRRE 432 >gi|254820231|ref|ZP_05225232.1| hypothetical protein MintA_09901 [Mycobacterium intracellulare ATCC 13950] Length=426 Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/426 (78%), Positives = 368/426 (87%), Gaps = 6/426 (1%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M ADLVPIRLSLSAGDRYT+WAPRWRD+GDEWEAFLGKD+DL+ F SV+DLVAFVR+DT+ Sbjct 1 MAADLVPIRLSLSAGDRYTVWAPRWRDSGDEWEAFLGKDEDLFVFSSVADLVAFVRSDTD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDL DHPAW+ LT AHAH+ PAED QFDLV VEEL++EKPTAESV+ALA +LAIVS+IG Sbjct 61 NDLTDHPAWKALTSAHAHDFEPAEDKQFDLVAVEELVSEKPTAESVSALAGTLAIVSSIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCELAAVSKFFNGNP LGTVSGG+EHFTGKAG KRW++IAE+IGRSWDDVL AID+I + Sbjct 121 SVCELAAVSKFFNGNPSLGTVSGGVEHFTGKAGAKRWHAIAEIIGRSWDDVLGAIDDIAT 180 Query 181 TPEVDAELSEKVAEELAEEPE------GAEEVAAEVEATQDTQEAAESDDEEADAPGDSV 234 TP+VDA+LS + +ELAEE E EE AA+ E E DD EA A GD+ Sbjct 181 TPDVDAKLSAEAEDELAEEREEDETEDAVEESAADDIDDDIDDEDEEDDDTEARAAGDTA 240 Query 235 VLGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLA 294 VLGGD+DFWLQVGIDPI+IMT + TF+TLRCYLDD PIFLGRNGRISVF SERALARYLA Sbjct 241 VLGGDKDFWLQVGIDPIRIMTSSGTFFTLRCYLDDEPIFLGRNGRISVFPSERALARYLA 300 Query 295 DEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAV 354 DEHDHDLSDLSTYDDIRTAATDGSL V VTDDN+YVL+GL DD ADGP+AVDREQL+LAV Sbjct 301 DEHDHDLSDLSTYDDIRTAATDGSLTVEVTDDNIYVLTGLADDLADGPEAVDREQLELAV 360 Query 355 ELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVE 414 E+LRDIGDYSED AVDKALET RPLG+LVA VL+P SV KP+ PYAAAVREWEKLE+FVE Sbjct 361 EVLRDIGDYSEDPAVDKALETNRPLGKLVAAVLEPGSVTKPSPPYAAAVREWEKLEQFVE 420 Query 415 SRLRRE 420 RLRRE Sbjct 421 GRLRRE 426 >gi|183981237|ref|YP_001849528.1| hypothetical protein MMAR_1215 [Mycobacterium marinum M] gi|183174563|gb|ACC39673.1| conserved protein [Mycobacterium marinum M] Length=441 Score = 622 bits (1604), Expect = 4e-176, Method: Compositional matrix adjust. Identities = 324/441 (74%), Positives = 363/441 (83%), Gaps = 21/441 (4%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M ADLVPIRLSLS GD YTLWAPRWRD+GDEWEAFLGKD+DLY F+SV+DLVAFVRTDT+ Sbjct 1 MAADLVPIRLSLSDGDHYTLWAPRWRDSGDEWEAFLGKDEDLYVFDSVADLVAFVRTDTD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHP WQDLT AHAHN +PA+D +FDLV+VEEL+AEKPT ESV A+AA+LAIVS+IG Sbjct 61 NDLVDHPGWQDLTEAHAHNFDPADDKKFDLVIVEELVAEKPTEESVNAMAATLAIVSSIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCEL AVSKFFNGNP LGTVSGG+++F+GKAG KRWN+IAE+I RSWDDVL AI+E++S Sbjct 121 SVCELTAVSKFFNGNPTLGTVSGGIDYFSGKAGQKRWNAIAEIIARSWDDVLKAIEEVVS 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEV---------------------EATQDTQEA 219 TPEVD +LS K AEEL EEPE EE + + +E Sbjct 181 TPEVDEKLSAKAAEELEEEPEEPEEDEGAAGEDDEASADSADEDDEDEAAEDEADEDEED 240 Query 220 AESDDEEADAPGDSVVLGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGR 279 E EE A GD+VVLGGD DFWL+VGIDPI+IMTG YTLRCYLDDRPIFLGRNGR Sbjct 241 EEDSVEEDRAAGDTVVLGGDEDFWLKVGIDPIRIMTGAGNLYTLRCYLDDRPIFLGRNGR 300 Query 280 ISVFGSERALARYLADEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFA 339 ISVF SERALARYLADEHDHDLSDL+TYDDIRTAATDGSLAV VTD+N+YVL+GL DDFA Sbjct 301 ISVFSSERALARYLADEHDHDLSDLATYDDIRTAATDGSLAVDVTDENIYVLTGLADDFA 360 Query 340 DGPDAVDREQLDLAVELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPY 399 DGP+AVD +QLDLAVELLRDIGDYSE+ VDKAL +PLG+LVAYVLDP S KP APY Sbjct 361 DGPEAVDHDQLDLAVELLRDIGDYSEEGTVDKALNPAKPLGKLVAYVLDPDSGSKPAAPY 420 Query 400 AAAVREWEKLERFVESRLRRE 420 A AVREWE+LERFVESRLRRE Sbjct 421 AKAVREWEQLERFVESRLRRE 441 >gi|118618137|ref|YP_906469.1| hypothetical protein MUL_2677 [Mycobacterium ulcerans Agy99] gi|118570247|gb|ABL04998.1| conserved protein [Mycobacterium ulcerans Agy99] Length=441 Score = 622 bits (1604), Expect = 4e-176, Method: Compositional matrix adjust. Identities = 324/441 (74%), Positives = 364/441 (83%), Gaps = 21/441 (4%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M ADLVPIRLSLS GD YTLWAPRWRD+GDEWEAFLGKD+DLY F+SV+DLVAFVRTDT+ Sbjct 1 MAADLVPIRLSLSDGDHYTLWAPRWRDSGDEWEAFLGKDEDLYVFDSVADLVAFVRTDTD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHP WQDLT AHAHN +PA+D +FDLV+VEEL+AEKPT ESV A+AA+LAIVS+IG Sbjct 61 NDLVDHPGWQDLTEAHAHNFDPADDKKFDLVIVEELVAEKPTEESVNAMAATLAIVSSIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCEL AVSKFFNGNP LGTVSGG+++F+GKAG KRWN+IAE+I RSWDDVL AI+E++S Sbjct 121 SVCELTAVSKFFNGNPTLGTVSGGIDYFSGKAGQKRWNAIAEIIARSWDDVLKAIEEVVS 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEV---------------------EATQDTQEA 219 TPEVD +LS K AEEL EEPE EE + ++ +E Sbjct 181 TPEVDEKLSAKAAEELEEEPEEPEEDEGAAGEDDDASADSADEDDEDEAAEDEDEEDEED 240 Query 220 AESDDEEADAPGDSVVLGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGR 279 E EE A GD+VVLGGD DFWL+VGIDPI+IMTG YTLRCYLDDRPIFLGRNGR Sbjct 241 EEDSVEEDRAAGDTVVLGGDEDFWLKVGIDPIRIMTGAGNLYTLRCYLDDRPIFLGRNGR 300 Query 280 ISVFGSERALARYLADEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFA 339 ISVF SERALARYLADEHDHDLSDL+TYDDIRTAATDGSLAV VTD+N+YVL+GL DDFA Sbjct 301 ISVFSSERALARYLADEHDHDLSDLATYDDIRTAATDGSLAVDVTDENIYVLTGLADDFA 360 Query 340 DGPDAVDREQLDLAVELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPY 399 DGP+AVD +QLDLAVELLRDIGDYSE+ VDKAL +PLG+LVAYVLDP S KP APY Sbjct 361 DGPEAVDHDQLDLAVELLRDIGDYSEEGTVDKALNPAKPLGKLVAYVLDPDSGSKPAAPY 420 Query 400 AAAVREWEKLERFVESRLRRE 420 A AVREWE+LERFVESRLRRE Sbjct 421 AKAVREWEQLERFVESRLRRE 441 >gi|41409531|ref|NP_962367.1| hypothetical protein MAP3433 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398362|gb|AAS05983.1| hypothetical protein MAP_3433 [Mycobacterium avium subsp. paratuberculosis K-10] Length=437 Score = 622 bits (1604), Expect = 4e-176, Method: Compositional matrix adjust. Identities = 321/436 (74%), Positives = 360/436 (83%), Gaps = 17/436 (3%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M ADLVPIRLSLSAGDRYT+WAPRWRD+GDEWEAFLGKD+DLY F SV+DLVAFVR+D + Sbjct 1 MAADLVPIRLSLSAGDRYTVWAPRWRDSGDEWEAFLGKDEDLYVFSSVADLVAFVRSDED 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDL DHPAW L AHAH PA+D QFDLV VEEL++EKPT ESV ALA LAIVS+IG Sbjct 61 NDLTDHPAWTRLRTAHAHKFEPAKDKQFDLVAVEELVSEKPTEESVTALAGVLAIVSSIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCELAAVSKFFNGNP LGTVSGG+EHFTGKAG KRW++IAE+I R WDDVL AID+I + Sbjct 121 SVCELAAVSKFFNGNPALGTVSGGIEHFTGKAGAKRWHAIAEIIARGWDDVLGAIDDIAT 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEAT---------QDTQEAAESDDE------ 225 TPEVD LS K +ELAEE + E A+ A ++ EA E+D E Sbjct 181 TPEVDEALSAKAEDELAEERDDEETDEADEAAEAPADATEPDEEALEADEADGEPDDDAD 240 Query 226 --EADAPGDSVVLGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVF 283 E A GD+VVLGGD+DFWLQVGIDPI+I+TG+ TFYTLRCYLDD+PIFLGRNGRISVF Sbjct 241 ETETRAAGDTVVLGGDKDFWLQVGIDPIRIITGSGTFYTLRCYLDDQPIFLGRNGRISVF 300 Query 284 GSERALARYLADEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPD 343 SERALARYLADEHDHDL+DLSTYDDIRTAATDGSL V +TDDN+YVLSGL DD ADGPD Sbjct 301 TSERALARYLADEHDHDLADLSTYDDIRTAATDGSLEVEITDDNIYVLSGLADDLADGPD 360 Query 344 AVDREQLDLAVELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAV 403 AVDR+QL+LAVE+LRDIGDYSEDS VDKALE RPLG+LVA VL+P SV KP+ PYAAAV Sbjct 361 AVDRDQLELAVEVLRDIGDYSEDSTVDKALEPGRPLGKLVAAVLEPGSVAKPSPPYAAAV 420 Query 404 REWEKLERFVESRLRR 419 REWEKLE+FV+ RLRR Sbjct 421 REWEKLEQFVDGRLRR 436 >gi|118465050|ref|YP_883427.1| hypothetical protein MAV_4288 [Mycobacterium avium 104] gi|118166337|gb|ABK67234.1| conserved hypothetical protein [Mycobacterium avium 104] Length=437 Score = 622 bits (1603), Expect = 5e-176, Method: Compositional matrix adjust. Identities = 319/437 (73%), Positives = 360/437 (83%), Gaps = 17/437 (3%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M ADLVPIRLSLSAGDRYT+WAPRWRD+GDEWEAFLGKD+DLY F SV+DLVAFVR+D + Sbjct 1 MAADLVPIRLSLSAGDRYTVWAPRWRDSGDEWEAFLGKDEDLYVFSSVADLVAFVRSDED 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDL DHPAW L AHAH PA+D QFDLV VEEL++EKPT ESV ALA LAIVS+IG Sbjct 61 NDLTDHPAWTRLRTAHAHKFEPAKDKQFDLVAVEELVSEKPTEESVTALAGVLAIVSSIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCELAAVSKFFNGNP LGTVSGG+EHFTGKAG KRW++IAE+I R WDDVL AID+I + Sbjct 121 SVCELAAVSKFFNGNPALGTVSGGIEHFTGKAGAKRWHAIAEIIARGWDDVLGAIDDIAT 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEV-------------EATQDTQEAAESDDE-- 225 TPEV+ LS K +ELAEE + E A+ EA ++ + E DD+ Sbjct 181 TPEVEEALSAKAEDELAEERDDEETDEADEAAEAPADATEPDEEALENDEADGEPDDDAD 240 Query 226 --EADAPGDSVVLGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVF 283 E A GD+VVLGGD+DFWLQVGIDPI+I+T + TFYTLRCYLDD+PIFLGRNGRISVF Sbjct 241 ETETRAAGDTVVLGGDKDFWLQVGIDPIRIITSSGTFYTLRCYLDDQPIFLGRNGRISVF 300 Query 284 GSERALARYLADEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPD 343 SERALARYLADEHDHDL+DLSTYDDIRTAATDGSL V +TDDN+YVLSGL DD ADGPD Sbjct 301 TSERALARYLADEHDHDLADLSTYDDIRTAATDGSLEVEITDDNIYVLSGLADDLADGPD 360 Query 344 AVDREQLDLAVELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAV 403 AVDR+QL+LAVE+LRDIGDYSEDS VDKALE RPLG+LVA VL+P SV KP+ PYAAAV Sbjct 361 AVDRDQLELAVEVLRDIGDYSEDSTVDKALEPGRPLGKLVAAVLEPGSVAKPSPPYAAAV 420 Query 404 REWEKLERFVESRLRRE 420 REWEKLE+FV+ RLRRE Sbjct 421 REWEKLEQFVDGRLRRE 437 >gi|336459601|gb|EGO38536.1| hypothetical protein MAPs_01210 [Mycobacterium avium subsp. paratuberculosis S397] Length=437 Score = 619 bits (1595), Expect = 4e-175, Method: Compositional matrix adjust. Identities = 319/437 (73%), Positives = 359/437 (83%), Gaps = 17/437 (3%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M ADLVPIRLSLSAGDRYT+WAPRWRD+GDEWEAFLGKD+DLY F SV+DLVAFVR+D + Sbjct 1 MAADLVPIRLSLSAGDRYTVWAPRWRDSGDEWEAFLGKDEDLYVFSSVADLVAFVRSDED 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDL DHPAW L A AH PA+D QFDLV VEEL++EKPT ESV ALA LAIVS+IG Sbjct 61 NDLTDHPAWTRLRTARAHKFEPAKDKQFDLVAVEELVSEKPTEESVTALAGVLAIVSSIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCELAAVSKFFNGNP LGTVSGG+EHFTGKAG KRW++IAE+I R WDDVL AID+I + Sbjct 121 SVCELAAVSKFFNGNPALGTVSGGIEHFTGKAGAKRWHAIAEIIARGWDDVLGAIDDIAT 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEAT---------QDTQEAAESDDE------ 225 TPEVD LS K +ELAEE + + A+ A ++ EA E+D E Sbjct 181 TPEVDEALSAKAEDELAEERDDEDTDEADEAAEAPADATEPDEEALEADEADGEPDDDAD 240 Query 226 --EADAPGDSVVLGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVF 283 E A GD+VVLGGD+DFWLQVGIDPI+I+T + TFYTLRCYLDD+PIFLGRNGRISVF Sbjct 241 ETETRAAGDTVVLGGDKDFWLQVGIDPIRIITSSGTFYTLRCYLDDQPIFLGRNGRISVF 300 Query 284 GSERALARYLADEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPD 343 SERALARYLADEHDHDL+DLSTYDDIRTAATDGSL V +TDDN+YVLSGL DD ADGPD Sbjct 301 TSERALARYLADEHDHDLADLSTYDDIRTAATDGSLEVEITDDNIYVLSGLADDLADGPD 360 Query 344 AVDREQLDLAVELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAV 403 AVDR+QL+LAVE+LRDIGDYSEDS VDKALE RPLG+LVA VL+P SV KP+ PYAAAV Sbjct 361 AVDRDQLELAVEVLRDIGDYSEDSTVDKALEPGRPLGKLVAAVLEPGSVAKPSPPYAAAV 420 Query 404 REWEKLERFVESRLRRE 420 REWEKLE+FV+ RLRRE Sbjct 421 REWEKLEQFVDGRLRRE 437 >gi|254776722|ref|ZP_05218238.1| hypothetical protein MaviaA2_18926 [Mycobacterium avium subsp. avium ATCC 25291] Length=432 Score = 616 bits (1589), Expect = 2e-174, Method: Compositional matrix adjust. Identities = 315/432 (73%), Positives = 355/432 (83%), Gaps = 17/432 (3%) Query 6 VPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTENDLVD 65 +PIRLSLSAGDRYT+WAPRWRD+GDEWEAFLGKD+DLY F SV+DLVAFVR+D +NDL D Sbjct 1 MPIRLSLSAGDRYTVWAPRWRDSGDEWEAFLGKDEDLYVFSSVADLVAFVRSDEDNDLTD 60 Query 66 HPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIGSVCEL 125 HPAW L AHAH PA+D QFDLV VEEL++EKPT ESV ALA LAIVS+IGSVCEL Sbjct 61 HPAWTRLRTAHAHKFEPAKDKQFDLVAVEELVSEKPTEESVTALAGVLAIVSSIGSVCEL 120 Query 126 AAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIISTPEVD 185 AAVSKFFNGNP LGTVSGG+EHFTGKAG KRW++IAE+I R WDDVL AID+I +TPEVD Sbjct 121 AAVSKFFNGNPALGTVSGGIEHFTGKAGAKRWHAIAEIIARGWDDVLGAIDDIATTPEVD 180 Query 186 AELSEKVAEELAEEPEGAEEVAAEV-------------EATQDTQEAAESDDE----EAD 228 LS K +ELAEE + E + EA +D + E DD+ E Sbjct 181 ETLSAKAEDELAEERDDEETDETDEAAEAPADATEPDEEALEDDEADGEPDDDADETETR 240 Query 229 APGDSVVLGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERA 288 A GD+VVLGGD+DFWLQVGIDPI+I+T + TFYTLRCYLDD+PIFLGRNGRISVF SERA Sbjct 241 AAGDTVVLGGDKDFWLQVGIDPIRIITSSGTFYTLRCYLDDQPIFLGRNGRISVFTSERA 300 Query 289 LARYLADEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDRE 348 LARYLADEHDHDL+DLSTYDDIRTAATDGSL V +TDDN+YVLSGL DD ADGPDAVDR+ Sbjct 301 LARYLADEHDHDLADLSTYDDIRTAATDGSLEVEITDDNIYVLSGLADDLADGPDAVDRD 360 Query 349 QLDLAVELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEK 408 QL+LAVE+LRDIGDYSEDS VDKALE RPLG+LVA VL+P SV KP+ PYAAAVREWEK Sbjct 361 QLELAVEVLRDIGDYSEDSTVDKALEPGRPLGKLVAAVLEPGSVAKPSPPYAAAVREWEK 420 Query 409 LERFVESRLRRE 420 LE+FV+ RLRRE Sbjct 421 LEQFVDGRLRRE 432 >gi|240171326|ref|ZP_04749985.1| hypothetical protein MkanA1_18586 [Mycobacterium kansasii ATCC 12478] Length=437 Score = 615 bits (1586), Expect = 5e-174, Method: Compositional matrix adjust. Identities = 328/437 (76%), Positives = 363/437 (84%), Gaps = 17/437 (3%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M ADLVPIRL LS GDRYTLWAPRWRD+GDEWEAFLGKD+DLY FE+V+DLVAFVR +T+ Sbjct 1 MAADLVPIRLGLSDGDRYTLWAPRWRDSGDEWEAFLGKDEDLYAFENVADLVAFVRGNTD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDL DHPAWQ+LT AHAH +PA D FDLVVVEEL+AEKPT ESV ALAA+LAIVS+IG Sbjct 61 NDLADHPAWQELTEAHAHAFDPAADKTFDLVVVEELVAEKPTEESVTALAATLAIVSSIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCEL AVSKFFNGNP LGTVSGG+E+FTGKAG KRWN+IAE+I R WDDVL AID+I+S Sbjct 121 SVCELPAVSKFFNGNPTLGTVSGGIEYFTGKAGQKRWNAIAEIIARGWDDVLKAIDDIVS 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGD-------- 232 PEVDA+L+ + A+ELAEEPE E AE + AAES DEE + Sbjct 181 VPEVDADLAAQAADELAEEPEEPAEEEAEEAEEAVDESAAESADEEDTEAAELESDDADE 240 Query 233 ---------SVVLGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVF 283 +VVLG D DFW +VGIDP+QIMTG TFYTLRCYLDDRPIFLGRNGRISVF Sbjct 241 DAEEEEAAAAVVLGSDEDFWSKVGIDPVQIMTGAGTFYTLRCYLDDRPIFLGRNGRISVF 300 Query 284 GSERALARYLADEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPD 343 SERALARYLADEHDHDL+DLSTYDDIRTAATDGSLAVAVTDDNVYVL+GL DDFADGPD Sbjct 301 NSERALARYLADEHDHDLADLSTYDDIRTAATDGSLAVAVTDDNVYVLTGLADDFADGPD 360 Query 344 AVDREQLDLAVELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAV 403 AVDR+QLDLAVELLRDIGDYSE+S VDKAL+ +PLG+LVAYVLDP SV KP PYA AV Sbjct 361 AVDRDQLDLAVELLRDIGDYSEESTVDKALDPGKPLGKLVAYVLDPDSVSKPVGPYAKAV 420 Query 404 REWEKLERFVESRLRRE 420 REWE++ERFVESRLRRE Sbjct 421 REWERVERFVESRLRRE 437 >gi|333991778|ref|YP_004524392.1| hypothetical protein JDM601_3138 [Mycobacterium sp. JDM601] gi|333487746|gb|AEF37138.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=412 Score = 559 bits (1440), Expect = 4e-157, Method: Compositional matrix adjust. Identities = 278/414 (68%), Positives = 336/414 (82%), Gaps = 7/414 (1%) Query 12 LSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTENDLVDHPAWQD 71 ++AGDRYTLWAPRWRDAGDEWEAFLGKD+DLY F++ +DLVAFVRT+T+NDL DHPAW Sbjct 1 MTAGDRYTLWAPRWRDAGDEWEAFLGKDEDLYVFDTAADLVAFVRTNTDNDLTDHPAWPR 60 Query 72 LTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIGSVCELAAVSKF 131 L A+AH LNP Q+DL+ VEELLA+KPT +SV ++A +L IVS+IG+VC+L AV+KF Sbjct 61 LVEANAHKLNPPRSRQYDLIAVEELLADKPTKQSVRSVADALEIVSSIGTVCDLTAVTKF 120 Query 132 FNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIISTPEVDAELSEK 191 FNGNP LGT++GG+++FTG+AG KRWN IA++IGRSW +VLAA++ +ISTP+VDA S + Sbjct 121 FNGNPSLGTLAGGVDNFTGRAGRKRWNQIADIIGRSWSNVLAAVEGVISTPDVDAAASSR 180 Query 192 VAEELAEEP-----EGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDRDFWLQV 246 A+ELAEEP E EVA T D E+ E+ E A GD VVLGGD DFW +V Sbjct 181 AADELAEEPPVEVTEAETEVAPADAETADATESTEAAVERAR--GDRVVLGGDADFWAKV 238 Query 247 GIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHDLSDLST 306 GIDPI+IMT TF+TLRCYL D P+FLGRNGRISVF SERALARYLADEHDHDLSDLST Sbjct 239 GIDPIRIMTDNGTFFTLRCYLGDEPVFLGRNGRISVFNSERALARYLADEHDHDLSDLST 298 Query 307 YDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDIGDYSED 366 YDDIRTAATDGSLA+ +TDDNVYVLSG+VDD DGPDAVDREQL+LAVE L+D+G Y+ED Sbjct 299 YDDIRTAATDGSLAIDITDDNVYVLSGMVDDLTDGPDAVDREQLELAVEFLQDVGSYAED 358 Query 367 SAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE 420 V + L+ R LG++V YVLD SV +P P+A AV+EWE+LE+FV+SRLRRE Sbjct 359 GVVAETLKPDRALGRMVGYVLDRESVAEPQRPFAPAVKEWEQLEQFVQSRLRRE 412 >gi|118470513|ref|YP_886060.1| hypothetical protein MSMEG_1684 [Mycobacterium smegmatis str. MC2 155] gi|118171800|gb|ABK72696.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=431 Score = 543 bits (1398), Expect = 3e-152, Method: Compositional matrix adjust. Identities = 278/431 (65%), Positives = 335/431 (78%), Gaps = 11/431 (2%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M AD+VP+RL L+ GD YTLWAPRWRDAGDEWEAFLGKD+DL+ FE+V+DLVAFVRT+++ Sbjct 1 MAADIVPVRLGLTKGDLYTLWAPRWRDAGDEWEAFLGKDEDLFAFETVADLVAFVRTNSD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDL DHPAW+ LT A+AH L+PAED +DLV V E++AEKPT +SV AL +LAI ++IG Sbjct 61 NDLTDHPAWEKLTEANAHKLDPAEDRHYDLVGVPEVVAEKPTEDSVEALRRTLAIAASIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVC+LAAV++FFNGNP+L TV GG+E F+G++G KRW I VI R WD V+ AIDEI++ Sbjct 121 SVCDLAAVNRFFNGNPVLSTVGGGIEAFSGRSGRKRWGEIETVILRGWDGVVDAIDEIVA 180 Query 181 TPE---------VDAELSEKVAEELAEE--PEGAEEVAAEVEATQDTQEAAESDDEEADA 229 PE +AEL E EE E+ E E+ A+ EA D + + D A A Sbjct 181 IPEDIDAAAVKKAEAELDEPAPEEDDEDIAVEDTEDAEADTEADTDESDDDDDDAVVAPA 240 Query 230 PGDSVVLGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERAL 289 + VLGGD DFWL+VGIDP++IMTGT TFYTLRCYLDD+P+FLGRNGRISVF SER L Sbjct 241 TAGTGVLGGDEDFWLKVGIDPVRIMTGTGTFYTLRCYLDDQPVFLGRNGRISVFPSERTL 300 Query 290 ARYLADEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQ 349 ARYLADEHDHDLSDL+TYDDIRTAATDGSL V VTD+NVYVLSG+ DD ADGP+A+DR+Q Sbjct 301 ARYLADEHDHDLSDLATYDDIRTAATDGSLRVEVTDENVYVLSGIADDIADGPEAIDRDQ 360 Query 350 LDLAVELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKL 409 L+LAVELLRD+ DYSED VD+ L T +PLG VA+VL+P P APYA AV +WE L Sbjct 361 LELAVELLRDVSDYSEDKTVDETLSTDQPLGAFVAHVLEPDDHDAPDAPYAKAVEQWESL 420 Query 410 ERFVESRLRRE 420 RFVESRLR+E Sbjct 421 VRFVESRLRQE 431 >gi|145225418|ref|YP_001136096.1| hypothetical protein Mflv_4840 [Mycobacterium gilvum PYR-GCK] gi|145217904|gb|ABP47308.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=416 Score = 539 bits (1388), Expect = 4e-151, Method: Compositional matrix adjust. Identities = 273/421 (65%), Positives = 329/421 (79%), Gaps = 7/421 (1%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M AD+VPI L+L+ GD YTLWAPRWR GDEWEAFLGKD+DLY ESV+DL AFVRT+ + Sbjct 1 MAADIVPIGLTLTKGDVYTLWAPRWRADGDEWEAFLGKDEDLYVLESVADLAAFVRTNND 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHPAW LT A+AH L P E N DLVV+EELLA+KPT V+AL +LA+VS++G Sbjct 61 NDLVDHPAWTKLTEANAHRLTPTESNTHDLVVLEELLAQKPTEAGVSALYGALAVVSSMG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCEL AV+KFFNGNP+LGTV GG+E F G+AG KRW I ++I + WD V+ A+DEII+ Sbjct 121 SVCELPAVTKFFNGNPVLGTVGGGVEAFAGRAGKKRWAEIEKIIAKGWDKVIEALDEIIT 180 Query 181 TPEVDAELSEKVAEEL-AEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGD 239 PEVD+ K EL A+ PE EE+ ++ DT E ESDD A+A ++ VLG D Sbjct 181 IPEVDSAAVAKAQAELDADAPEPDEELV--IDDVVDTPE--ESDDLAAEA--ETKVLGSD 234 Query 240 RDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDH 299 +DFW +VGIDPI+IM T++TLRCY DDRPIFLGRNGRISVF SERALARYLADEHDH Sbjct 235 KDFWERVGIDPIRIMMTGETYFTLRCYFDDRPIFLGRNGRISVFPSERALARYLADEHDH 294 Query 300 DLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRD 359 DLSDL+TYDDIRTAATDGSL V VTDDNVYVL+ +VDD A+GPDA+D +Q++LAVELLRD Sbjct 295 DLSDLATYDDIRTAATDGSLRVDVTDDNVYVLTDIVDDLAEGPDALDHDQIELAVELLRD 354 Query 360 IGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRR 419 IGDYSE++ VD L LG+++ +VL+P V +P AP+A AV +WE LERFVESRLR Sbjct 355 IGDYSEEATVDTKLAPDTALGRVIFHVLEPGKVARPNAPFADAVTQWESLERFVESRLRS 414 Query 420 E 420 E Sbjct 415 E 415 >gi|120402599|ref|YP_952428.1| hypothetical protein Mvan_1593 [Mycobacterium vanbaalenii PYR-1] gi|119955417|gb|ABM12422.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=428 Score = 539 bits (1388), Expect = 4e-151, Method: Compositional matrix adjust. Identities = 269/421 (64%), Positives = 334/421 (80%), Gaps = 7/421 (1%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M AD+VPI L+L+ GD YTLWAPRWR GDEWEAFLGKD+DLY ESV+DL AFVRT+ + Sbjct 14 MAADIVPIGLTLTKGDVYTLWAPRWRADGDEWEAFLGKDEDLYVLESVADLAAFVRTNND 73 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDL DHPAWQ LT A+AH L P+E N DLVV+EELLA KPT +SV AL +LA+VS++G Sbjct 74 NDLADHPAWQKLTEANAHRLAPSEANTHDLVVLEELLARKPTEDSVRALHGALAVVSSMG 133 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCEL AV+KFFNG+P+LG V GG+E F G+AG KRW I +++ + WD+V+AA+DE+I+ Sbjct 134 SVCELPAVTKFFNGHPVLGAVGGGVEAFAGRAGRKRWAEIEKIVAKGWDNVIAALDEVIT 193 Query 181 TPEVDAELSEKVAEELAEE-PEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGD 239 P+VD+ +EK EL E PE E++ ++ DT+E A+ EA+ + VLG D Sbjct 194 IPDVDSVAAEKAQAELDEPAPEPDEDLV--IDDVVDTEEEADELAVEAE----TKVLGSD 247 Query 240 RDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDH 299 +DFW +VGIDP++IMT TF+TLRCYLDD+PIFLGRNGRISVF SERALARYLADEHDH Sbjct 248 KDFWARVGIDPVRIMTSGGTFFTLRCYLDDQPIFLGRNGRISVFTSERALARYLADEHDH 307 Query 300 DLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRD 359 DLS L+TYDDIRTAATDGSL + VTDDNVYVL+G+VDD A+GPDA+D +QL+LAVELLRD Sbjct 308 DLSGLATYDDIRTAATDGSLRIDVTDDNVYVLTGIVDDLAEGPDALDHDQLELAVELLRD 367 Query 360 IGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRR 419 IGDYSED+ V+ L LG+++A+VLDP +V +P APYA AV +WE +E FVESRLR+ Sbjct 368 IGDYSEDTGVEAKLAPDTALGRVIAHVLDPKAVKRPGAPYADAVAQWESVESFVESRLRQ 427 Query 420 E 420 E Sbjct 428 E 428 >gi|315445766|ref|YP_004078645.1| hypothetical protein Mspyr1_42500 [Mycobacterium sp. Spyr1] gi|315264069|gb|ADU00811.1| hypothetical protein Mspyr1_42500 [Mycobacterium sp. Spyr1] Length=416 Score = 536 bits (1382), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 272/421 (65%), Positives = 328/421 (78%), Gaps = 7/421 (1%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M AD+VPI L+L+ GD YTLWAPRWR GDEWEAFLGKD+DLY ESV+DL AFVRT+ + Sbjct 1 MAADIVPIGLTLTKGDVYTLWAPRWRADGDEWEAFLGKDEDLYVLESVADLAAFVRTNND 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHPAW LT ++AH L P E N DLVV+EELLA+KPT V+AL +LA+VS++G Sbjct 61 NDLVDHPAWTKLTESNAHRLAPTESNTHDLVVLEELLAQKPTEAGVSALYGALAVVSSMG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCEL AV+KFFNGNP+LGTV GG+E F G+AG KRW I +I + WD V+ A+DEII+ Sbjct 121 SVCELPAVTKFFNGNPVLGTVGGGVEAFAGRAGKKRWAEIERIIAKGWDKVIEALDEIIT 180 Query 181 TPEVDAELSEKVAEEL-AEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGD 239 PEVD+ K EL A+ PE EE+ ++ DT E ESDD A+A ++ VLG D Sbjct 181 IPEVDSAAVAKAQAELDADAPEPDEELV--IDDVVDTPE--ESDDLAAEA--ETKVLGSD 234 Query 240 RDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDH 299 +DFW +VGIDPI+IM T++TLRCY DDRPIFLGRNGRISVF SERALARYLADEHDH Sbjct 235 KDFWERVGIDPIRIMMTGGTYFTLRCYFDDRPIFLGRNGRISVFPSERALARYLADEHDH 294 Query 300 DLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRD 359 DLSDL+TYDDIRTAATDGSL V VTDDNVYVL+ +VDD A+GPDA+D +Q++LAVELLRD Sbjct 295 DLSDLATYDDIRTAATDGSLRVDVTDDNVYVLTDIVDDLAEGPDALDHDQIELAVELLRD 354 Query 360 IGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRR 419 IGDYSE++ VD L LG+++ +VL+P V +P AP+A AV +WE LERFVESRLR Sbjct 355 IGDYSEEATVDTKLAPDTALGRVIFHVLEPGKVARPNAPFADAVTQWESLERFVESRLRS 414 Query 420 E 420 E Sbjct 415 E 415 >gi|108798205|ref|YP_638402.1| hypothetical protein Mmcs_1234 [Mycobacterium sp. MCS] gi|119867301|ref|YP_937253.1| hypothetical protein Mkms_1251 [Mycobacterium sp. KMS] gi|108768624|gb|ABG07346.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119693390|gb|ABL90463.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=422 Score = 531 bits (1369), Expect = 6e-149, Method: Compositional matrix adjust. Identities = 274/423 (65%), Positives = 322/423 (77%), Gaps = 4/423 (0%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M AD+VP+RL L+ GD YTLWAPRWRDAGDEWEAFLGKD+DLY FESV+DLVAFVRTDT+ Sbjct 1 MAADIVPVRLGLTKGDLYTLWAPRWRDAGDEWEAFLGKDEDLYAFESVADLVAFVRTDTD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 +DL DHPAW+ LT A AH L P ED+++DLV V E AEK + V L +LAI ++IG Sbjct 61 HDLTDHPAWEKLTEASAHRLKPTEDHEYDLVGVPETAAEKASETVVGTLHRTLAIAASIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVC+L AV+KFFNGNP LG+V GG+E F G++G KRW I VI RSWD VL AIDEI++ Sbjct 121 SVCDLPAVTKFFNGNPQLGSVGGGVEAFKGRSGRKRWAEIEAVIARSWDGVLDAIDEIVT 180 Query 181 TPEVDAELSEKVAEELAEEPEGA---EEVAAEVEATQDTQEAAESDDEEADAPGDSVVLG 237 TP+VDA SEK A EL E + AA E T+D + A D ++P S VLG Sbjct 181 TPDVDAAASEKAAAELEEPAPEEGEDNDAAATAEETEDAEPTATESDA-LESPAASAVLG 239 Query 238 GDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEH 297 D DFWL+VGIDP+++MT + TFYTLRCYL D P+FLGRNGRISVFGSERALARYLADEH Sbjct 240 SDEDFWLKVGIDPVRLMTRSGTFYTLRCYLGDDPVFLGRNGRISVFGSERALARYLADEH 299 Query 298 DHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELL 357 DHDLSDL TYDDIRTAATDGSL V V DDNVYVLSGL DD ADGPD +DR+QLDLA+ELL Sbjct 300 DHDLSDLPTYDDIRTAATDGSLEVEVIDDNVYVLSGLADDIADGPDTIDRDQLDLALELL 359 Query 358 RDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRL 417 RD+G Y+ED+ V+K L+ LG V + LDP + +P PYA AV +WE LE FVESRL Sbjct 360 RDVGHYAEDNTVEKTLDPATALGAFVTHALDPDAADRPEPPYAQAVEQWEALEAFVESRL 419 Query 418 RRE 420 R+E Sbjct 420 RQE 422 >gi|126433862|ref|YP_001069553.1| hypothetical protein Mjls_1260 [Mycobacterium sp. JLS] gi|126233662|gb|ABN97062.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=422 Score = 523 bits (1346), Expect = 3e-146, Method: Compositional matrix adjust. Identities = 273/422 (65%), Positives = 325/422 (78%), Gaps = 2/422 (0%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M AD+VP+RL L+ GD YTLWAPRWRDAGDEWEAFLGKD+DLY FESV+DLVAFVRTDT+ Sbjct 1 MAADIVPVRLGLTKGDLYTLWAPRWRDAGDEWEAFLGKDEDLYAFESVADLVAFVRTDTD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 +DL DHPAW+ LT A AH L PAED+++DLV V E AEK + V L +LAI ++IG Sbjct 61 HDLTDHPAWEKLTEASAHRLKPAEDHEYDLVGVPETAAEKASETVVGTLHRTLAIAASIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVC+L AV+KFFNGNP LG+V GG+E F G++G KRW I VI RSWD VL AIDEI++ Sbjct 121 SVCDLPAVTKFFNGNPQLGSVGGGVEAFKGRSGRKRWAEIEAVIARSWDGVLDAIDEIVT 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEA--AESDDEEADAPGDSVVLGG 238 TP+VDA SEK A EL E +E ++T++A +D +E ++P S VLG Sbjct 181 TPDVDAAASEKAAAELEEPAPEEDEDTEAAATAEETEDAEPTATDSDELESPAASAVLGS 240 Query 239 DRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHD 298 D DFWL+VGIDP+++MT + TFYTLRCYL D P+FLGRNGRISVFGSERALARYLADEHD Sbjct 241 DEDFWLKVGIDPVRLMTRSGTFYTLRCYLGDDPVFLGRNGRISVFGSERALARYLADEHD 300 Query 299 HDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLR 358 HDLSDL TYDDIRTAATDGSL V V DDNVYVLSGL DD ADGPD +DR+QLDLA+ELLR Sbjct 301 HDLSDLPTYDDIRTAATDGSLEVEVIDDNVYVLSGLADDIADGPDTIDRDQLDLALELLR 360 Query 359 DIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLR 418 D+G Y+ED+ V+K L+ LG V + LDP + +P PYA AV +WE LE FVESRLR Sbjct 361 DVGHYAEDNTVEKTLDPGTALGAFVTHALDPDAADRPEPPYAQAVEQWEALEAFVESRLR 420 Query 419 RE 420 +E Sbjct 421 QE 422 >gi|289752007|ref|ZP_06511385.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289692594|gb|EFD60023.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=305 Score = 505 bits (1300), Expect = 6e-141, Method: Compositional matrix adjust. Identities = 256/282 (91%), Positives = 262/282 (93%), Gaps = 0/282 (0%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE Sbjct 4 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 63 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG Sbjct 64 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 123 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS Sbjct 124 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 183 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR Sbjct 184 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 243 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISV 282 DFWLQVGIDPIQI + ++ DR + G + + Sbjct 244 DFWLQVGIDPIQIRAPPPSTRFAVTWMIDRSSWAAMVGSVCL 285 >gi|54022921|ref|YP_117163.1| hypothetical protein nfa9540 [Nocardia farcinica IFM 10152] gi|54014429|dbj|BAD55799.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=414 Score = 382 bits (980), Expect = 8e-104, Method: Compositional matrix adjust. Identities = 212/419 (51%), Positives = 276/419 (66%), Gaps = 9/419 (2%) Query 3 ADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTEND 62 D+VPI L L+ GD TLWAPRWRD DEW AFLG +D LYGFE V++L AFVRT+++ND Sbjct 4 GDIVPIELGLTDGDLVTLWAPRWRDGDDEWMAFLGHEDTLYGFEGVAELAAFVRTNSDND 63 Query 63 LVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIGSV 122 LVDHPAW+ + G A L P E+ +DLV V EL A P E++A L +L +V IG V Sbjct 64 LVDHPAWKVVVGLSAAELEPEENYSYDLVGVPELAAGDPDPETIAELEETLEMVRNIGDV 123 Query 123 CELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIISTP 182 CEL V+KFF+ +P+LG + G+ F G+ G + W+ I I + WD VL A+D ++S P Sbjct 124 CELETVTKFFSSHPVLGALPSGVSAFVGRDGEELWDQIGAAIAKDWDAVLDAVDTVVSIP 183 Query 183 EVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDRDF 242 EVDA+ EL E + +A ++ + D + + +S F Sbjct 184 EVDADALAVAEAELLAAEENVVDADDVADAEEEEEFEPVDLDADDEDEEES--------F 235 Query 243 WLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHDLS 302 W +VGIDP++I+T T++TLRCYLDD PIFLGR+G I VFGSERALARYLAD+HDHDL+ Sbjct 236 WHEVGIDPVKIVTSEGTYFTLRCYLDDEPIFLGRDGSILVFGSERALARYLADDHDHDLA 295 Query 303 DLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDIGD 362 +STY D++TAA DGSL V VTD+NVYVL GL +D A+GP AVD +QLDLAVEL D D Sbjct 296 RVSTYGDVQTAAVDGSLEVEVTDENVYVLPGLAEDLAEGPRAVDIDQLDLAVELFTDAAD 355 Query 363 YSEDSAVDKALETTRPLGQLVAYVLDPHSVG-KPTAPYAAAVREWEKLERFVESRLRRE 420 Y++D AV+ AL + PLG V+Y+L+P P PYAA + W +LER E+RL E Sbjct 356 YADDDAVETALAKSTPLGWYVSYLLNPDPTRLAPNPPYAAEAQAWRELERNFEARLVSE 414 >gi|226365720|ref|YP_002783503.1| hypothetical protein ROP_63110 [Rhodococcus opacus B4] gi|226244210|dbj|BAH54558.1| hypothetical protein [Rhodococcus opacus B4] Length=414 Score = 379 bits (973), Expect = 5e-103, Method: Compositional matrix adjust. Identities = 216/425 (51%), Positives = 278/425 (66%), Gaps = 18/425 (4%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D+VPI L L+ GD TLWAPRWR+ DEWEAFLG ++DLYGFESV++L AF+RT+T+ Sbjct 1 MAGDIVPIELGLTDGDLVTLWAPRWREGDDEWEAFLGHEEDLYGFESVAELAAFIRTNTD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLV+HPAW ++G A L P E+ FDL+ V EL A P A V+ L +L +V IG Sbjct 61 NDLVEHPAWGVVSGLSAAELEPDENFCFDLIGVPELAASDPEALVVSELEDTLNMVRNIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VCEL AV+KFFN NPILG + G F G+ G + W I I + WDDVL A+D I++ Sbjct 121 EVCELDAVTKFFNANPILGALPAGASAFEGREGEELWAQIGTAIAKGWDDVLDAVDNIVA 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQ-----EAAESDDEEADAPGDSVV 235 TPEVDAE EL E +V E ++ + + DDEE D+ Sbjct 181 TPEVDAEAVAVAEAELVAADENTVDVDDVAEEAEEDEEFVALDLGTEDDEEDDS------ 234 Query 236 LGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLAD 295 FW VG+DP++I+T T++TLRCYLDD IFLGR+G I VF SERALARYLAD Sbjct 235 ------FWGAVGVDPVKIITSGETYFTLRCYLDDDAIFLGRDGAIFVFTSERALARYLAD 288 Query 296 EHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVE 355 H+H L+ +STY++I+ AA DGSL V VTD+NVYVL GL DD A GP+AVD +QLDLAVE Sbjct 289 NHEHALAQVSTYEEIQVAAVDGSLEVEVTDENVYVLPGLADDLAAGPEAVDADQLDLAVE 348 Query 356 LLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSV-GKPTAPYAAAVREWEKLERFVE 414 L D D+++D +V+ AL ++ PLG V++VL+P P+AP+ A W LER E Sbjct 349 LFTDAADFADDDSVETALASSEPLGWYVSFVLNPDPTRMAPSAPFDAEAEAWRTLEREFE 408 Query 415 SRLRR 419 +RLR+ Sbjct 409 ARLRK 413 >gi|111023215|ref|YP_706187.1| hypothetical protein RHA1_ro06252 [Rhodococcus jostii RHA1] gi|110822745|gb|ABG98029.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=414 Score = 375 bits (962), Expect = 9e-102, Method: Compositional matrix adjust. Identities = 214/420 (51%), Positives = 277/420 (66%), Gaps = 8/420 (1%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D+VPI L L+ GD TLWAPRWR+ DEWEAFLG ++DLYGFESV++L AF+RT+T+ Sbjct 1 MAGDIVPIELGLTDGDLVTLWAPRWREGDDEWEAFLGHEEDLYGFESVAELAAFIRTNTD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLV+HPAW ++G A L P E+ FDL+ V EL A P A V+ L +L +V IG Sbjct 61 NDLVEHPAWSVVSGLSAAELEPDENFCFDLIGVPELAASDPEALVVSELEDTLNMVRNIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VCEL AV+KFFN NPILG + G+ F G+ G + W I I + WDDVL A+D I++ Sbjct 121 EVCELDAVTKFFNANPILGALPAGVSAFEGREGEELWAQIGTAIAKGWDDVLDAVDNIVA 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 TPEVDAE EL E +V E ++ +E D + D D Sbjct 181 TPEVDAEAVAVAEAELVAADENTVDVDDVAEEAEEDEEFVALDLDTEDE-------EEDD 233 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 FW VG+DP++I+T T++TLRCYLDD +FLGR+G I VF SERALARYLAD H+H Sbjct 234 SFWGAVGVDPVKIITSGETYFTLRCYLDDDALFLGRDGAIFVFTSERALARYLADNHEHA 293 Query 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 L+ +STY++I+ AA DGSL V VTD+NVYVL GL DD A GP++VD +QLDLAVEL D Sbjct 294 LAQVSTYEEIQVAAVDGSLEVEVTDENVYVLPGLADDLAAGPESVDADQLDLAVELFTDA 353 Query 361 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSV-GKPTAPYAAAVREWEKLERFVESRLRR 419 D+++D +V+ AL T+ PLG V++VL+P P+AP+ A W LER E+RLR+ Sbjct 354 ADFADDDSVETALATSEPLGWYVSFVLNPDPTRMAPSAPFDAEAEAWRTLEREFEARLRK 413 >gi|343926660|ref|ZP_08766158.1| hypothetical protein GOALK_067_00430 [Gordonia alkanivorans NBRC 16433] gi|343763412|dbj|GAA13084.1| hypothetical protein GOALK_067_00430 [Gordonia alkanivorans NBRC 16433] Length=424 Score = 373 bits (957), Expect = 4e-101, Method: Compositional matrix adjust. Identities = 207/423 (49%), Positives = 271/423 (65%), Gaps = 3/423 (0%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D+VPI L L+ G+ +TLWAPRWR+ DEWEAFLG D+DLY V++L AFVRT+ + Sbjct 1 MAGDIVPIELGLTDGNSFTLWAPRWREGDDEWEAFLGLDEDLYVLPGVAELAAFVRTNDD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLV+HPAW + G A L P E + +DLV V EL AE PT E +A L +L IV +G Sbjct 61 NDLVEHPAWPTIVGVQAEELIPDERHTYDLVGVPELAAEDPTPEVIAELEDALEIVRILG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VCEL A++KFFNGNPILG V+ G +F G+ G W I +I + WDDVL AIDE+I+ Sbjct 121 EVCELTAITKFFNGNPILGAVTTGTRNFEGREGTDLWVRIGRLIAKHWDDVLDAIDEVIT 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEA--AESDDEEADAPGDSVVLGG 238 TP+VDA+ E EL +E + + + + A +DE+ D D Sbjct 181 TPKVDAKAVETAEAELEAAASAEDEDEPDDDDIEIVETADDTVDEDEDEDDDEDDGDEYD 240 Query 239 DRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHD 298 D DFW VGIDPI+I+T + TLRCYL D P+FLG G+I VF S R+L+R+LAD++ Sbjct 241 DDDFWASVGIDPIKIVTSGNEYLTLRCYLGDDPVFLGAKGKIFVFTSARSLSRFLADDNA 300 Query 299 HDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLR 358 HDL++L T++DIRT AT+GSL V DDNVYVL GL +D ADGP +DR+QLDLAVEL Sbjct 301 HDLAELMTFEDIRTEATNGSLEFDVIDDNVYVLPGLAEDIADGPRRMDRDQLDLAVELFT 360 Query 359 DIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGK-PTAPYAAAVREWEKLERFVESRL 417 D DY+ D V++AL T+ PLG V Y ++P P+ P+ W LE E+RL Sbjct 361 DAADYAGDDTVNEALGTSTPLGWFVDYTVNPDPKRMAPSGPFDNEAEAWRALEHDFETRL 420 Query 418 RRE 420 ++ Sbjct 421 VKK 423 >gi|333921526|ref|YP_004495107.1| hypothetical protein AS9A_3869 [Amycolicicoccus subflavus DQS3-9A1] gi|333483747|gb|AEF42307.1| hypothetical protein AS9A_3869 [Amycolicicoccus subflavus DQS3-9A1] Length=412 Score = 369 bits (946), Expect = 8e-100, Method: Compositional matrix adjust. Identities = 198/422 (47%), Positives = 275/422 (66%), Gaps = 16/422 (3%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D+VPI L L+ GD TLWAPRWR+ DEW+AFLG+D+DL+ FES++ L AF+RT+ + Sbjct 1 MAGDIVPIELGLTDGDVVTLWAPRWREGDDEWQAFLGRDEDLFAFESIAQLAAFIRTEED 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 +DLV+HP W + A L P E++++DLV EL A P A +VA L +L + +G Sbjct 61 HDLVEHPTWHVVAALSAAELEPEEEHRYDLVGAPELAAGLPDALTVAELEDTLNMARTLG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VC+L AV++FF+ +P L + GG F G G + WN + + WD VL AID I++ Sbjct 121 EVCDLDAVNRFFDNHPQLDALPGGHHAFAGSDGEELWNKVGRALADGWDGVLDAIDNIVA 180 Query 181 TPEVDAELSEKVAEELAEEPEG---AEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLG 237 +P+VD E+ E E+ E A++ A + ++ EA S+D++ D Sbjct 181 SPDVDPEVLELCEAEILAADENDVEADDAAESADDVEELDEAPLSEDDDHD--------- 231 Query 238 GDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEH 297 DFW+ VGIDP++I+TG+ +YTLRCYLDD P+FLG++G I F SERALARYLAD+H Sbjct 232 ---DFWVAVGIDPVKILTGSDEYYTLRCYLDDLPVFLGKDGTIYAFRSERALARYLADKH 288 Query 298 DHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELL 357 DH+L+ ++T+ ++ TAATDGSL + VTDDN YVL+GLVDD A GP++VD EQLDLAVELL Sbjct 289 DHELAAVTTFAEVATAATDGSLDITVTDDNTYVLTGLVDDIATGPESVDSEQLDLAVELL 348 Query 358 RDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGK-PTAPYAAAVREWEKLERFVESR 416 D D+++D +V++AL T PLG V+YV+ P P AP+ W L E+R Sbjct 349 SDAADFADDDSVEEALARTTPLGWYVSYVISPDPTRMAPGAPFTTEAAAWRDLVHAFEAR 408 Query 417 LR 418 LR Sbjct 409 LR 410 >gi|226305536|ref|YP_002765496.1| hypothetical protein RER_20490 [Rhodococcus erythropolis PR4] gi|226184653|dbj|BAH32757.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=429 Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 203/424 (48%), Positives = 280/424 (67%), Gaps = 16/424 (3%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D+VPI + L+ GD TLWAPRWR+ DEWEAFLG ++DLYGF SV++L AF+RTD++ Sbjct 18 MAGDIVPIEIGLTDGDLVTLWAPRWREGDDEWEAFLGHEEDLYGFSSVAELAAFIRTDSD 77 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLV+HPAW ++G A L P E+ FD V V EL A P A +V+ L +L + IG Sbjct 78 NDLVEHPAWAVVSGLSAAELEPEENFTFDFVGVPELAAGDPEALAVSELEDTLNMARNIG 137 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VCEL AV +FF+G+P+LG ++ G F G+ G + W+ + I + WD VL AID++++ Sbjct 138 EVCELDAVIRFFSGHPVLGALATGAGTFEGREGLELWDQVGAAIVKDWDAVLDAIDKVVT 197 Query 181 TPEVDAELSEKVAEELAEEPEG---AEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLG 237 +P+VDA EL E A++VA E E + ++ + +++E + Sbjct 198 SPKVDAAAVAVAEAELLAAAENTVDADDVAEEGEDEEFDEDDLDEEEDEVET-------- 249 Query 238 GDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEH 297 FW +VG+DPI+I+T TFYTLRCY+ D+ IFLG++G I+VF SERALARYLAD H Sbjct 250 ----FWGEVGVDPIRIITSAETFYTLRCYMGDQAIFLGKDGLITVFRSERALARYLADNH 305 Query 298 DHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELL 357 +HDLS +STY +I+ AA DGSL + VTD+NVYVL G+ DD A GPD VD EQL+LAVEL Sbjct 306 EHDLSQVSTYGEIQNAAVDGSLEIEVTDENVYVLPGIADDLAQGPDVVDAEQLELAVELF 365 Query 358 RDIGDYSEDSAVDKALETTRPLGQLVAYVLDPH-SVGKPTAPYAAAVREWEKLERFVESR 416 D D+++D + ++AL + LG V+Y+L+P S P+AP+ W +LER E+R Sbjct 366 TDAADFADDDSTEEALSASNELGWYVSYLLNPDPSRMAPSAPFTKESEAWRELEREFEAR 425 Query 417 LRRE 420 LR E Sbjct 426 LRSE 429 >gi|229489356|ref|ZP_04383219.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229323453|gb|EEN89211.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=412 Score = 363 bits (931), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 205/424 (49%), Positives = 279/424 (66%), Gaps = 16/424 (3%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D+VPI + L+ GD TLWAPRWR+ DEWEAFLG ++DLYGF SV++L AF+RTD++ Sbjct 1 MAGDIVPIEIGLTDGDLVTLWAPRWREGDDEWEAFLGHEEDLYGFSSVAELAAFIRTDSD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLV+HPAW ++G A L P E+ FD V V EL A P A V+ L +L + IG Sbjct 61 NDLVEHPAWAVVSGLSAAELEPEENFTFDFVGVPELAAGDPEALVVSELEDTLNMARNIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VCEL AV +FF+G+P+LG ++ G F G+ G + W+ + I + WD VL AID++++ Sbjct 121 EVCELDAVIRFFSGHPVLGALATGAGTFEGREGLELWDQVGAAIVKDWDAVLDAIDKVVT 180 Query 181 TPEVDAELSEKVAEELAEEPEG---AEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLG 237 +P+VDA EL E A++VA E E + ++ E D++E + Sbjct 181 SPKVDAAAVAVAEAELLAAAENTVDADDVAEEGEDEEFDEDDLEEDEDEVET-------- 232 Query 238 GDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEH 297 FW +VG+DPI+I+T TFYTLRCY+ D+ IFLG++G I+VF SERALARYLAD H Sbjct 233 ----FWGEVGVDPIRIITSAETFYTLRCYMGDQAIFLGKDGLITVFRSERALARYLADNH 288 Query 298 DHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELL 357 +HDLS +STY +I+ AA DGSL + VTD+NVYVL G+ DD A GPD VD EQL+LAVEL Sbjct 289 EHDLSQVSTYGEIQNAAVDGSLEIEVTDENVYVLPGIADDLAQGPDVVDAEQLELAVELF 348 Query 358 RDIGDYSEDSAVDKALETTRPLGQLVAYVLDPH-SVGKPTAPYAAAVREWEKLERFVESR 416 D D+++D + ++AL + LG V+Y+L+P S P+AP+ W +LER E+R Sbjct 349 TDAADFADDDSTEEALSASNELGWYVSYLLNPDPSRMAPSAPFTKESEAWRELEREFEAR 408 Query 417 LRRE 420 LR E Sbjct 409 LRSE 412 >gi|312140767|ref|YP_004008103.1| hypothetical protein REQ_34290 [Rhodococcus equi 103S] gi|311890106|emb|CBH49424.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=413 Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 204/422 (49%), Positives = 272/422 (65%), Gaps = 11/422 (2%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D+VPI L L+ GD TLWAP WR+ DEWEAFLG ++DLYGF +V++L AF+RT+ + Sbjct 1 MAGDIVPIELGLTRGDLVTLWAPSWREGDDEWEAFLGHEEDLYGFPTVAELAAFIRTNGD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHP+W ++ A L P +D+ +DLV V EL A P +VA L ++L +V +G Sbjct 61 NDLVDHPSWATVSRLAAPELEPDDDHGYDLVGVPELAAGDPEPLTVAELRSTLDMVRNLG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VCEL V KFF + L + GG + F G+ G + W+ I I R WD V+ A+D I+S Sbjct 121 EVCELEPVLKFFANHSELNYLRGGQDVFAGREGEELWDRIGTAIARGWDAVIDAVDSIVS 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 TP VDA+ E+ E + + EA +D +E ++E ++ Sbjct 181 TPAVDAQALAIAEAEILAAEENVVDADDDAEADEDLEEYDADSEDEEQDEEET------- 233 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 FW +VGIDPIQI+T T+Y+LRCYLD+ +FLGR G+ISVFGSERALARYLAD HDH Sbjct 234 -FWTEVGIDPIQIITSETTYYSLRCYLDEHAVFLGRGGKISVFGSERALARYLADNHDHA 292 Query 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 L+ +STY+ ++TAA DGSL + VTD NVYVL GL DD A+GPDAVD +QL+LAVEL D Sbjct 293 LAQVSTYEQVQTAAVDGSLDIEVTDQNVYVLPGLADDLAEGPDAVDADQLELAVELFTDA 352 Query 361 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGK--PTAPYAAAVREWEKLERFVESRLR 418 D+++D A D AL + PLG V+Y+L+P G+ P+ P+ A W LE E+RLR Sbjct 353 ADFAKDDATDAALAASTPLGWYVSYILEPDP-GRMTPSPPFQAEAEAWRALENEFETRLR 411 Query 419 RE 420 E Sbjct 412 PE 413 >gi|325675593|ref|ZP_08155277.1| hypothetical protein HMPREF0724_13059 [Rhodococcus equi ATCC 33707] gi|325553564|gb|EGD23242.1| hypothetical protein HMPREF0724_13059 [Rhodococcus equi ATCC 33707] Length=413 Score = 352 bits (903), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 203/422 (49%), Positives = 271/422 (65%), Gaps = 11/422 (2%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D+VPI L L+ GD TLWAP WR+ DEWEAFLG ++DLYGF +V++L AF+RT+ + Sbjct 1 MAGDIVPIELGLTRGDLVTLWAPSWREGDDEWEAFLGHEEDLYGFPTVAELAAFIRTNGD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHP+W ++ A L P +D+ +DLV V EL A P +VA L ++L +V +G Sbjct 61 NDLVDHPSWATVSRLAAPELEPDDDHGYDLVGVPELAAGDPEPLTVAELRSTLDMVRNLG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VCEL V KFF + L + GG + F G+ G + W+ I I R WD V+ A+D I+S Sbjct 121 EVCELEPVLKFFANHSELNYLRGGQDVFAGREGEELWDRIGTAIARGWDAVIDAVDSIVS 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 P VDA+ E+ E + + EA +D +E ++E ++ Sbjct 181 IPVVDAQALAIAEAEILAAEENVVDADDDAEADEDLEEYDADSEDEEQDEEET------- 233 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 FW +VGIDPIQI+T T+Y+LRCYLD+ +FLGR G+ISVFGSERALARYLAD HDH Sbjct 234 -FWTEVGIDPIQIITSETTYYSLRCYLDEHAVFLGRGGKISVFGSERALARYLADNHDHA 292 Query 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 L+ +STY+ ++TAA DGSL + VTD NVYVL GL DD A+GPDAVD +QL+LAVEL D Sbjct 293 LAQVSTYEQVKTAAVDGSLDIEVTDQNVYVLPGLADDLAEGPDAVDADQLELAVELFTDA 352 Query 361 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGK--PTAPYAAAVREWEKLERFVESRLR 418 D+++D A D AL + PLG V+Y+L+P G+ P+ P+ A W LE E+RLR Sbjct 353 ADFAKDDATDAALAASTPLGWYVSYILEPDP-GRMTPSPPFQAEAEAWRALENEFETRLR 411 Query 419 RE 420 E Sbjct 412 PE 413 >gi|326381954|ref|ZP_08203647.1| hypothetical protein SCNU_03382 [Gordonia neofelifaecis NRRL B-59395] gi|326199380|gb|EGD56561.1| hypothetical protein SCNU_03382 [Gordonia neofelifaecis NRRL B-59395] Length=418 Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 198/420 (48%), Positives = 259/420 (62%), Gaps = 5/420 (1%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D+VPI L L+ G+ +TLWAPRWR+ DEWEAFLG DDDLY V++L AFVRTD + Sbjct 1 MAGDIVPIELGLTEGNLFTLWAPRWREGDDEWEAFLGLDDDLYALPGVAELTAFVRTDDD 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 NDLVDHPAW+ + A L P + + +DL+ V EL AE P E +A L +L IV IG Sbjct 61 NDLVDHPAWETIKKLQASELVPDDKHSYDLIGVPELAAEDPRPEVLAELEDALEIVRIIG 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VCELAAV+KFFNGNPILG V+ G +FTG+ G W I +I + WDDV+ A+D++I+ Sbjct 121 EVCELAAVTKFFNGNPILGAVTVGTNNFTGRDGVDLWVRIGRLIAKHWDDVIDALDDVIT 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 P+VDA+ +ELA +E E D+ + E +D++A+ D + Sbjct 181 VPKVDADAVTVAEDELAAAASAEDEDEPEF----DSVDPLEDEDDDAEEDDDVEDEIDED 236 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 DFW VGIDPI+I T F TLRCYL D P+FLG+ G + FGSERAL R+LAD DHD Sbjct 237 DFWAGVGIDPIRIYTDGGEFLTLRCYLGDDPVFLGKKGTVYGFGSERALTRFLADNDDHD 296 Query 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 L+ LST+ ++++AA + V +NVY L G+ +D DGP VD QLDLAVELL D Sbjct 297 LAKLSTFSEVQSAADTNEIEFDVLSENVYALQGIGEDILDGPRRVDSHQLDLAVELLTDA 356 Query 361 GDYSEDSAVDKALETTRPLGQLVAYVLDPHSVG-KPTAPYAAAVREWEKLERFVESRLRR 419 DY+ V++AL TT PLG V Y ++P P+ P+ W L E RL + Sbjct 357 ADYAGIDTVNEALATTTPLGWFVDYAVNPDPKRLAPSGPFDNEAEVWRALVHDFEDRLVK 416 >gi|319949452|ref|ZP_08023512.1| hypothetical protein ES5_08421 [Dietzia cinnamea P4] gi|319436878|gb|EFV91938.1| hypothetical protein ES5_08421 [Dietzia cinnamea P4] Length=410 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 180/413 (44%), Positives = 245/413 (60%), Gaps = 25/413 (6%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D+VPI L L GD TLWAP WR+ D+WEAFLG DDLY F+S ++L+A VR+ E Sbjct 5 MAKDIVPIELGLPEGDVTTLWAPSWREDNDDWEAFLGLGDDLYAFDSTAELLALVRSGAE 64 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 +DL DHP+W+ + + A++N +DLV V ELL E PT SV + S AI +IG Sbjct 65 HDLQDHPSWEQFAQSDVLDFRAADENCYDLVGVLELLGENPTESSVDEIDQSFAIARSIG 124 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VCEL V+KFFNGNP+L +V+ G++ F G+ G K W SI + + + WDDVL AI ++++ Sbjct 125 EVCELDTVTKFFNGNPVLASVTHGMDEFYGRDGLKLWKSIRKTVAKGWDDVLDAIQDVMT 184 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 TPE+D E+ +L E + E + P S+ Sbjct 185 TPELDRGEVERARYDL------------ETAEAALPEPEPEPEPAPTGYPEGSL------ 226 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 W VGIDPI+I+ + +LRCYL DRP+FLG + VF S R LAR+LAD D Sbjct 227 --WESVGIDPIKIVFSDQEYLSLRCYLGDRPVFLGDGDQAYVFTSPRGLARFLADNDDAT 284 Query 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 LS ++TY+ ++ AA DGSL V VTDDN YVL+GL D GPD VD +QL LAVEL+ D+ Sbjct 285 LSRVATYERVKLAAVDGSLDVHVTDDNAYVLAGLDRDIEVGPDMVDPDQLGLAVELVTDL 344 Query 361 GDYSEDSAVDKALETTR--PLGQLVAYVLDPH--SVGKPTAPYAAAVREWEKL 409 +Y D+ ++ ++ T R L + V YVL+P + +PTAP+ EW L Sbjct 345 ANYVGDAELEASV-TGRGSALRRFVHYVLNPDDAKLLEPTAPFDDEATEWRDL 396 >gi|257054616|ref|YP_003132448.1| hypothetical protein Svir_05470 [Saccharomonospora viridis DSM 43017] gi|256584488|gb|ACU95621.1| hypothetical protein Svir_05470 [Saccharomonospora viridis DSM 43017] Length=427 Score = 315 bits (808), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 186/425 (44%), Positives = 262/425 (62%), Gaps = 7/425 (1%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D++PI L L GD TLWAPRWR+ G+EWEAFLG ++DLY F + L A+VRT + Sbjct 1 MAQDIIPIELGLPQGDLVTLWAPRWREDGEEWEAFLGDEEDLYAFPDSAHLAAYVRTAEQ 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 +DL+DHPAW+ + + L P +D+ +DLV V EL+AE P + ++A LA + IV ++ Sbjct 61 HDLIDHPAWEAVPALNVPELIPDDDHCYDLVGVPELVAEDPDSWTLAELAEIVNIVRSLA 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VC+L V + + ++ G FTG+ G + WN ++ + WD VL AIDE+++ Sbjct 121 DVCDLDEVHEVLDSCEAFSLLNQGQLPFTGREGARLWNDLSVTVSEKWDIVLDAIDELVT 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 PEVD+ ++ EELA E + E A V+A D + + DD + + D D Sbjct 181 IPEVDSATLDETTEELAAFHEESAEAEAGVDAEDDDLDTVDGDDFDDEDETDVTDDDFDD 240 Query 241 D---FWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLAD-- 295 + FW +VGIDPI+I+ + +YTLRCYLDD P+FLG NG I V+ SERALAR LAD Sbjct 241 EPLGFWAEVGIDPIKIVLPSRDYYTLRCYLDDDPVFLGSNGTIEVYPSERALARALADGG 300 Query 296 EHDH-DLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAV 354 + H DL+++ST+D++ AAT G L + V DN YVL+GL DD A+G DA++ QL+LAV Sbjct 301 KLAHTDLAEVSTWDEVLAAATAGELEIDVDPDNTYVLTGLDDDIAEGVDAIEPTQLELAV 360 Query 355 ELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVG-KPTAPYAAAVREWEKLERFV 413 ELL D D++ D V KAL T+ LG LV++VL P P+ P+ A + W L Sbjct 361 ELLTDAADWAGDDEVSKALATSERLGWLVSFVLRPDPTRLTPSPPFDAEQQAWRNLVDSF 420 Query 414 ESRLR 418 E+RL Sbjct 421 ENRLH 425 >gi|300782795|ref|YP_003763086.1| hypothetical protein AMED_0864 [Amycolatopsis mediterranei U32] gi|299792309|gb|ADJ42684.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340524169|gb|AEK39374.1| hypothetical protein RAM_04410 [Amycolatopsis mediterranei S699] Length=423 Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 187/421 (45%), Positives = 254/421 (61%), Gaps = 5/421 (1%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D++PI L L GD TLWAPRWR+ G+EWEAFLG +DDLY F + L AFVRT Sbjct 1 MAQDIIPIELGLPQGDVVTLWAPRWREDGEEWEAFLGDEDDLYAFADAAHLAAFVRTSER 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 +DL+DHPAW + + L P ED+ +DLV V EL+AE+P +A LA + IV ++ Sbjct 61 HDLLDHPAWDAVPSLNVPELIPDEDHTYDLVGVPELVAEEPDVWHIAELAEIVGIVRSLA 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VC+L V + + + G FTG G + WN ++E + + WD VL AID +++ Sbjct 121 DVCDLEEVHEILDSTEGFSLLDQGTLPFTGSVGVQVWNDLSETVSQKWDTVLDAIDGLVT 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 PEVD ++ E+ AEELA E + E A E +D EA ++ D D + G Sbjct 181 QPEVDEKVLEQTAEELAAFHEESAEAEAGAEGEEDL-EAIDTLDSSDDEDEEEEEDEGPV 239 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEH--- 297 FW +VGIDPI+I+T A +YTLRCYLDD P+FLG G I VF S ALAR LAD Sbjct 240 GFWAEVGIDPIKIITSGAEYYTLRCYLDDAPVFLGSEGEIDVFTSTGALARALADGKELG 299 Query 298 DHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELL 357 D DL+++ST+D++ AT G L + V +N YVL+GL D A+GP+A+D QL+LAVEL+ Sbjct 300 DTDLAEVSTWDEVLAKATAGELEIEVDPENTYVLTGLDADIAEGPEAIDPTQLELAVELI 359 Query 358 RDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVG-KPTAPYAAAVREWEKLERFVESR 416 D D++ D + + AL LG LV++VL P +P+AP+ A W KL E+R Sbjct 360 TDAADWAGDDSAETALAKNESLGWLVSFVLRPEPTRLEPSAPFDAEQGAWRKLVETFENR 419 Query 417 L 417 L Sbjct 420 L 420 >gi|134103002|ref|YP_001108663.1| hypothetical protein SACE_6570 [Saccharopolyspora erythraea NRRL 2338] gi|291005241|ref|ZP_06563214.1| hypothetical protein SeryN2_12037 [Saccharopolyspora erythraea NRRL 2338] gi|133915625|emb|CAM05738.1| hypothetical protein SACE_6570 [Saccharopolyspora erythraea NRRL 2338] Length=408 Score = 308 bits (790), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 188/423 (45%), Positives = 250/423 (60%), Gaps = 22/423 (5%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D+VPI L L GD TLWAPRWR+ G+EWEAFLG ++DLY F + L AFVRT E Sbjct 1 MAQDIVPIELGLPQGDVVTLWAPRWREDGEEWEAFLGHEEDLYAFPDSARLAAFVRTAAE 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 +DL DHPAW + A LNP ED+QFDLV V EL+AE P ++ LA + I ++ Sbjct 61 HDLDDHPAWHVVPALSAVELNPDEDHQFDLVGVPELVAEPPDTWTINELADIVEIARSLA 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VCEL V + + + G F+GK G KRWN + +V+ WD+VL AID +++ Sbjct 121 DVCELDKVHEVLDSADGFAVLDQGTLAFSGKDGQKRWNELCKVVVDRWDEVLDAIDGVVT 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 +PEV A+ ELAE + EE A EA+E DD EA V + Sbjct 181 SPEVAADAVATAEAELAEALDTDEEEGA---------EASELDDVEA-------VEDEEL 224 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLAD----E 296 FW ++GIDPI+I+T Y+LRCYL+D P+FLG G+I VF S RALAR+LAD E Sbjct 225 GFWGEIGIDPIRIITSQGEHYSLRCYLEDDPVFLGSEGKIDVFSSPRALARFLADADSVE 284 Query 297 HDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVEL 356 H +DL+ ++T+ + AT G L V V ++N YVL+GL D A GP VD QLDLA EL Sbjct 285 H-NDLTRVATWPKVTEKATAGELTVEVDEENTYVLAGLDADLAAGPSEVDPVQLDLAEEL 343 Query 357 LRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPH-SVGKPTAPYAAAVREWEKLERFVES 415 L D ++ D V++ L+ + LG +V++VL P + P+ P+ A V W+ L E Sbjct 344 LVDAAVWAGDKTVEETLQPSERLGWMVSFVLQPSPNRLPPSPPFDAEVEAWQGLVESFEE 403 Query 416 RLR 418 RLR Sbjct 404 RLR 406 >gi|302524173|ref|ZP_07276515.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302433068|gb|EFL04884.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=417 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 179/423 (43%), Positives = 252/423 (60%), Gaps = 15/423 (3%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D++PI L L GD TLWAPRWR+ G+EWEAFLG +DDLY F + L AFVRT + Sbjct 1 MAQDIIPIELGLPQGDVVTLWAPRWREDGEEWEAFLGDEDDLYAFPDAAHLAAFVRTAEQ 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 +DL+DHPAW + + L P +D+ +DLV V EL+AE+P + ++ LA + IV ++ Sbjct 61 HDLLDHPAWDAVPALNVPELIPDDDHSYDLVGVPELVAEEPDSWTIGELAEIVGIVRSLA 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VCEL V + + + G FTG+ G WN +++ + WD VL AID +++ Sbjct 121 DVCELDEVHEVLDAYEGFSLLEQGRLPFTGREGEALWNDLSKAVSEKWDTVLDAIDNLVT 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVE--ATQDTQEAAESDDEEADAPGDSVVLGG 238 P+VDA + E+ AEELA E + E A E +D + D++ D P Sbjct 181 VPDVDAAVLEQTAEELAAFHEESAEAEAGEEDGGPEDLEAVDADDEDAEDEP-------- 232 Query 239 DRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYL--ADE 296 FW +VGIDPI+I+T A +YTLRCYLDD+P+FLG G I VFGS +AL + + DE Sbjct 233 -VGFWGEVGIDPIKIVTSGAEYYTLRCYLDDKPVFLGSEGEIDVFGSPKALLKAIKAGDE 291 Query 297 -HDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVE 355 D DL+ +ST+D++R A L + V DN YV GL +D A+GP+++D QL+LAVE Sbjct 292 LADTDLAGVSTWDEVREKAAADELEIEVDPDNTYVFPGLDEDIAEGPESIDPTQLELAVE 351 Query 356 LLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPH-SVGKPTAPYAAAVREWEKLERFVE 414 L+ D +++ D V+ AL LG LV++VL P S +P+AP+ W KL E Sbjct 352 LITDAAEWAGDDTVETALAANESLGWLVSFVLRPDPSRLEPSAPFDTEQSAWRKLVEDFE 411 Query 415 SRL 417 +RL Sbjct 412 NRL 414 >gi|256380432|ref|YP_003104092.1| hypothetical protein Amir_6445 [Actinosynnema mirum DSM 43827] gi|255924735|gb|ACU40246.1| hypothetical protein Amir_6445 [Actinosynnema mirum DSM 43827] Length=404 Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 184/420 (44%), Positives = 253/420 (61%), Gaps = 20/420 (4%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M D+VPI L L+ GD TLWAPRWR+ G+EWEAFLG ++DLY F + L AFVR E Sbjct 1 MAQDIVPIELGLTQGDVVTLWAPRWREEGEEWEAFLGHEEDLYAFPDAAHLAAFVREAAE 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 +DL DHPAW + L+P E++QFDLV V EL+AE+P + LA ++IV ++ Sbjct 61 HDLTDHPAWHVVPALSVEELSPDENHQFDLVGVPELVAEEPDTWVIGELADVVSIVRSLA 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VC+L V + + + G FTG+ G W+ + +V+ WD+VL AIDE++S Sbjct 121 EVCDLEKVHEVLDSAEGFALLPQGTLPFTGREGKALWSELGQVVAEKWDEVLDAIDEVVS 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 TP+VD E + +E + A E A + + EA E+ AP Sbjct 181 TPDVD-EAALAKGQEELAAYQEAAEAARAEDDDVEDDEAGEA------APT--------- 224 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHD 300 FW ++GIDP++I+T +YTLRCYLDD P+FLGR G+I F S RAL+R++ + D+D Sbjct 225 -FWSEIGIDPVKIITSAGEYYTLRCYLDDEPLFLGRRGKIDAFTSPRALSRFIVEADDND 283 Query 301 LSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDI 360 L+++ST+ ++ AT G L V V DNVYVL+GL +D A+GPD +D QLDL VELL D Sbjct 284 LTEVSTWQELVVKATGGDLEVEVDPDNVYVLTGLDEDIAEGPDGIDPTQLDLVVELLEDA 343 Query 361 GDYSEDSAVDKALETTRPLGQLVAYVL--DPHSVGKPTAPYAAAVREWEKLERFVESRLR 418 D++ D +V AL + LG LV+YVL DP+ + P+APY A V W L E RLR Sbjct 344 ADWAGDDSVKLALNQSESLGWLVSYVLKPDPNRLA-PSAPYDAEVAAWRTLSAAFEDRLR 402 >gi|467184|gb|AAA17342.1| L308_F2_61 [Mycobacterium leprae] Length=167 Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 141/167 (85%), Positives = 151/167 (91%), Gaps = 0/167 (0%) Query 254 MTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHDLSDLSTYDDIRTA 313 MTG TFYTLRCYLDD PIFLGRNGRISVF SERALARYLADEHDHDLS LSTYDDIRTA Sbjct 1 MTGAGTFYTLRCYLDDHPIFLGRNGRISVFSSERALARYLADEHDHDLSYLSTYDDIRTA 60 Query 314 ATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDIGDYSEDSAVDKAL 373 ATDGSLA+ +TDDN+YVLSGL DD ADGPDAVDR+QLDLAVELLRDIG YSE+SAVD AL Sbjct 61 ATDGSLAIDITDDNIYVLSGLSDDLADGPDAVDRDQLDLAVELLRDIGQYSEESAVDTAL 120 Query 374 ETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRRE 420 ET RPLG+LVA+VL P +V KP APY+AAVREWEKLE+FVESRLR E Sbjct 121 ETNRPLGKLVAHVLSPSAVDKPVAPYSAAVREWEKLEQFVESRLRLE 167 >gi|331699043|ref|YP_004335282.1| hypothetical protein Psed_5295 [Pseudonocardia dioxanivorans CB1190] gi|326953732|gb|AEA27429.1| hypothetical protein Psed_5295 [Pseudonocardia dioxanivorans CB1190] Length=440 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 173/438 (40%), Positives = 244/438 (56%), Gaps = 20/438 (4%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M +D+VPIRLSL+ GD TLWAPRWR+ G+EWEAFLG DD L+ F V+ L AFVRT E Sbjct 1 MASDIVPIRLSLTEGDLVTLWAPRWREDGEEWEAFLGDDDSLFAFPEVAQLAAFVRTAEE 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 +DLVDHPAW + L P + + +D+V V L+A +P ++ LA ++ +V++I Sbjct 61 HDLVDHPAWSVVPELSVAELTPEDTHVYDVVGVPALVAGEPDTWTIGELAETVDMVTSIA 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VC L V++ P L + G FTG+ G++ W + + WD+V+ A+D +++ Sbjct 121 DVCGLERVAEILESVPGLALLHQGTLPFTGREGDRLWGQVVSTVADHWDEVIDALDALVT 180 Query 181 TPEVDAE--LSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGG 238 TPEVDA KV + + E A E + + ++ E +A +++ Sbjct 181 TPEVDATALAGAKVEADRLAQREAAAVATVRAEHPDADADDPDEEELEDEAVEEAIEEQV 240 Query 239 DR-----------DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSER 287 D FW VGIDPI+I+ + TLRCYL D P+FLG G I VF SER Sbjct 241 DEDEAEEEAEREPTFWENVGIDPIRIVLPDVEYVTLRCYLGDDPVFLGSEGHIDVFSSER 300 Query 288 ALARYLA------DEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADG 341 ALAR+LA D +DL+ ST+D++ A G L V V + N YVL+G+ DD ADG Sbjct 301 ALARHLADVGRNDDGAKNDLTAASTWDEVLDKAAVGELEVTVDELNTYVLAGIADDIADG 360 Query 342 PDAVDREQLDLAVELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVG-KPTAPYA 400 VD QLDLAVEL+ DIGD++ D + + LG LV++V+ P P+ P+ Sbjct 361 TLTVDPTQLDLAVELMVDIGDWAGDPVPREEFAESESLGWLVSFVIRPDPTRLAPSPPFD 420 Query 401 AAVREWEKLERFVESRLR 418 + + L V SRLR Sbjct 421 SESARFAALVERVRSRLR 438 >gi|324999777|ref|ZP_08120889.1| hypothetical protein PseP1_13461 [Pseudonocardia sp. P1] Length=449 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 171/424 (41%), Positives = 247/424 (59%), Gaps = 8/424 (1%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 + +D+VPIRL+L+ GD TLWAP WR+ G+EWEAFLG D+ ++ F+ V+ L AFVRT + Sbjct 26 VASDIVPIRLALTRGDVVTLWAPPWREDGEEWEAFLGDDEHVFVFDEVAGLAAFVRTASG 85 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 +DL DHPAW + G L P E +++DLV + EL A P A +V L +++IV ++ Sbjct 86 HDLEDHPAWAAVPGLAVGELTPDEAHRYDLVGLPELAAGDPDAFTVQELHEAVSIVRSLA 145 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VC+L V +G P + G + F G+ G K W++++E + R WD+++ +D ++S Sbjct 146 DVCDLENVITALDGEPSFALLREGEQAFGGREGAKHWSALSEALTRHWDEIVDTVDGLVS 205 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 TP+VDA EK E AE E EA D A + + A Sbjct 206 TPDVDAGALEKARTEAAEWEAAREAAFGAAEADDDEALEAAALEAGAAE--ADDEDEAPD 263 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADE---- 296 FW +VGIDPI+I +G + TLRCYLDD+P+FLG +G+I VFGSERA+ R LAD Sbjct 264 GFWTRVGIDPIRIESGDRSVVTLRCYLDDKPVFLGSDGKIDVFGSERAMFRALADPEHPA 323 Query 297 -HDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVE 355 H DL+ T+ D+ AA G L V D N YVL+G+ D A+G +D QLDLA E Sbjct 324 VHGTDLAAAVTFTDVLEAAGTGDLDEGVDDMNTYVLTGIGPDLAEGVLDLDPVQLDLASE 383 Query 356 LLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGK-PTAPYAAAVREWEKLERFVE 414 LL D+G+++ D +L + LG LV++V+ P P+ P++ + W +L +E Sbjct 384 LLTDVGEWAGDPEPADSLAESNSLGWLVSFVVRPDPTRMAPSPPFSQEAQSWGELVAGLE 443 Query 415 SRLR 418 +RLR Sbjct 444 ARLR 447 >gi|305679785|ref|ZP_07402595.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|305660405|gb|EFM49902.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length=409 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 158/417 (38%), Positives = 232/417 (56%), Gaps = 16/417 (3%) Query 5 LVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTENDLV 64 +VP++LSL+ GD YTLWAP WR+ G EW+AFLG DDL+ F S ++L+ F+ +D ++DL Sbjct 6 IVPVKLSLTKGDFYTLWAPSWREHGAEWQAFLGAGDDLFVFHSPAELLVFLESDEKHDLQ 65 Query 65 DHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIGSVCE 124 HP W + A PAE +FDLV V LA+KP++ +V A+A I ++G V Sbjct 66 SHPKWGAFSARDALRAVPAEKEEFDLVGVPAFLADKPSSSNVKAVARCFRIARSLGDVAA 125 Query 125 LAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIISTPEV 184 + FF+ + ILG GLEHF+G AG W +I V+ +WD V+ +D++++ EV Sbjct 126 STPIQVFFSSHSILGNAERGLEHFSGPAGMSEWTAIGRVVLVNWDSVIDELDDLVTVKEV 185 Query 185 DAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDRDFWL 244 D E K AE+ EE + E + E + +EA + D P D+ V W Sbjct 186 D-EDKIKDAEQRIEETKKINEEKQKAEEQKRKEEAEQVD------PYDNTV-------WG 231 Query 245 QVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHDLSDL 304 GIDPI+I T YTLR Y+ +P+FLG+ G I F S +AL R+L + DHDL+ + Sbjct 232 IAGIDPIKISIDGRTVYTLRTYVQAKPVFLGKYGEIFTFNSSKALVRWLVEHDDHDLAKV 291 Query 305 STYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDIGDYS 364 ST++DI T A G L V V DNVY +G+ D GP+ VD QL A ELL D D++ Sbjct 292 STWEDIMTVANAGELGVTVHQDNVYSFNGITRDIEKGPEQVDSNQLLRAYELLADAADWA 351 Query 365 EDSAVDKALETTRPLGQLVAYVLD-PHSVG-KPTAPYAAAVREWEKLERFVESRLRR 419 D +++ + ++Y+ ++ G PT P+ W++LE + R + Sbjct 352 GDDSLNSFFLANPRMQDYISYLTGYTNNAGYTPTPPFNEHAEAWQQLEDMLTKRFSK 408 >gi|225020585|ref|ZP_03709777.1| hypothetical protein CORMATOL_00592 [Corynebacterium matruchotii ATCC 33806] gi|224946531|gb|EEG27740.1| hypothetical protein CORMATOL_00592 [Corynebacterium matruchotii ATCC 33806] Length=409 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 157/417 (38%), Positives = 230/417 (56%), Gaps = 16/417 (3%) Query 5 LVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTENDLV 64 +VP++LSL+ GD YTLWAP WR+ G EW+AFLG DDL+ F S ++L+ F+ +D ++DL Sbjct 6 IVPVKLSLTKGDFYTLWAPSWREHGAEWQAFLGAGDDLFVFHSPAELLVFLESDEKHDLQ 65 Query 65 DHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIGSVCE 124 HP W + A PAE +FDLV V LA+ P++ +V A+A I ++G V Sbjct 66 SHPKWGAFSARDALRAVPAEKEEFDLVGVPAFLADTPSSSNVKAVARCFRIARSLGDVAA 125 Query 125 LAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIISTPEV 184 + FF+ + ILG GLEHFTG AG W +I V+ +WD V+ +D++++ EV Sbjct 126 STPIQVFFSSHSILGNAERGLEHFTGPAGMSEWTAIGRVVLVNWDSVIDELDDLVTVKEV 185 Query 185 DAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDRDFWL 244 D E K E+ EE + E + E + +EA + D P D+ V W Sbjct 186 D-EDKIKDTEQRIEETKKINEEKQKAEEQKRKEEAEQVD------PYDNTV-------WG 231 Query 245 QVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHDLSDL 304 GIDPI+I T YTLR Y+ +P+FLG+ G I F S +AL R+L + DHDL+ + Sbjct 232 IAGIDPIKISIDGRTVYTLRTYVQAKPVFLGKYGEIFTFNSSKALVRWLVEHDDHDLAKV 291 Query 305 STYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDIGDYS 364 ST++DI T A G L V V DNVY +G+ D GP+ VD QL A ELL D D++ Sbjct 292 STWEDIMTVANAGELGVTVHQDNVYSFNGITRDIEKGPEQVDSNQLLRAYELLADAADWA 351 Query 365 EDSAVDKALETTRPLGQLVAYVLD-PHSVG-KPTAPYAAAVREWEKLERFVESRLRR 419 D +++ + ++Y+ ++ G PT P+ W++LE + R + Sbjct 352 GDDSLNSFFLANPRMQDYISYLTGYTNNAGYTPTPPFNEHAEAWQQLEDMLTKRFSK 408 >gi|467179|gb|AAA17337.1| L308_F1_17 [Mycobacterium leprae] Length=166 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 128/162 (80%), Positives = 147/162 (91%), Gaps = 0/162 (0%) Query 6 VPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTENDLVD 65 +PI LSL AGDRYT+WAPRWRD GDEWEAFLGKDD+LY E+V+DLVAFVRTD++NDLVD Sbjct 1 MPICLSLPAGDRYTVWAPRWRDGGDEWEAFLGKDDNLYACETVADLVAFVRTDSDNDLVD 60 Query 66 HPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIGSVCEL 125 HPAW+DLT HAH L+P+EDNQFDLVVVEEL+AEKPTAESV LAA+LAIV++IGSVCEL Sbjct 61 HPAWKDLTSVHAHKLDPSEDNQFDLVVVEELVAEKPTAESVTTLAATLAIVASIGSVCEL 120 Query 126 AAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRS 167 AVSKFFNGNP LG VSGG+EHFTG+AG +RWNSIAE+IG + Sbjct 121 PAVSKFFNGNPSLGAVSGGIEHFTGRAGQRRWNSIAEIIGEA 162 >gi|169630748|ref|YP_001704397.1| hypothetical protein MAB_3669 [Mycobacterium abscessus ATCC 19977] gi|169242715|emb|CAM63743.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=442 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 128/187 (69%), Positives = 153/187 (82%), Gaps = 0/187 (0%) Query 234 VVLGGDRDFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYL 293 VVLGGD DFWL+VGIDPIQ++T + TFYTLRCYL+D PIFLGRNGRISVFGSERALARYL Sbjct 256 VVLGGDEDFWLEVGIDPIQMITNSGTFYTLRCYLNDEPIFLGRNGRISVFGSERALARYL 315 Query 294 ADEHDHDLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLA 353 ADEHDHDL+DLSTYDDIRTAATDGSL + +TDDN+YV +GL DD DG D VDR+QL+LA Sbjct 316 ADEHDHDLADLSTYDDIRTAATDGSLRIDITDDNIYVFTGLADDLEDGVDEVDRDQLELA 375 Query 354 VELLRDIGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFV 413 VELL D+ +YSED +VD L++ PLG+LV ++L+P +P P+ A W LER + Sbjct 376 VELLTDVAEYSEDDSVDAELDSDTPLGKLVGHLLEPEKHDEPKGPFVDAAERWRTLERAM 435 Query 414 ESRLRRE 420 E+RLRRE Sbjct 436 EARLRRE 442 >gi|227486994|ref|ZP_03917310.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227093068|gb|EEI28380.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] Length=413 Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 146/415 (36%), Positives = 229/415 (56%), Gaps = 11/415 (2%) Query 5 LVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTENDLV 64 +VPI+L L+ GD YTL+AP W+ G +WEAF G D ++ F S ++++A++ + EN+L Sbjct 9 IVPIKLRLTEGDVYTLYAPAWKQHGAQWEAFAGDDAHIFVFRSPAEILAWLEANPENELT 68 Query 65 DHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIGSVCE 124 +HPAW + + P E + + L+ V LA++ + E+V A + + A+G+V Sbjct 69 EHPAWPRFSARGDDRVVPDERHIYSLIEVPAYLADRASYENVTATQRCMEVAKALGNVGS 128 Query 125 LAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIISTPEV 184 LA V+ FF + ILG + G EH+ + W I V+ SW+ VL AIDE + P+ Sbjct 129 LAPVNTFFASHSILGNLRRGHEHYASEETAGEWTGIGTVVLDSWEKVLDAIDEAVVIPDS 188 Query 185 DAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDRDFWL 244 DA+ + + A A A ++ AA + + E P D+ V W Sbjct 189 DADAVASAQSRV----DAAVATATAAAAAKEEGSAATAQEAENIDPYDASV-------WA 237 Query 245 QVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHDLSDL 304 GIDPIQI T YTLR +++++P+FLG G+I F + ++LAR+L D DHD++ L Sbjct 238 HAGIDPIQITVDGKTVYTLRSFVENQPVFLGSFGKIFTFNNRKSLARWLMDHDDHDIAKL 297 Query 305 STYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDIGDYS 364 ST+ I+ A+ G+L V V DDN YVL+G+ +D A GPD+VD +Q+ AVEL D D++ Sbjct 298 STWQIIKDEASVGNLDVLVHDDNTYVLTGIKEDIAKGPDSVDIKQMGRAVELFADTADWA 357 Query 365 EDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRR 419 D +++ L + + Y+L P+AP+ V W+ LE + R + Sbjct 358 RDDSMNATLLANPTFDRYIKYMLGNEGGYVPSAPFTDEVNGWKLLENTLTERFSK 412 >gi|227541844|ref|ZP_03971893.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227182287|gb|EEI63259.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length=413 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 147/416 (36%), Positives = 230/416 (56%), Gaps = 13/416 (3%) Query 5 LVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTENDLV 64 +VPI+L L+ GD YTL+AP W+ G +WEAF G D ++ F S ++++A++ + EN+L Sbjct 9 IVPIKLRLTEGDVYTLYAPAWKQHGAQWEAFAGDDAHIFVFRSPAEILAWLEANPENELT 68 Query 65 DHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIGSVCE 124 +HPAW + + P E + + L+ V LA++ + E+V A + + A+G+V Sbjct 69 EHPAWPRFSARGDDRVVPDERHIYSLIEVPAYLADRASYENVTATQRCMEVAKALGNVGS 128 Query 125 LAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIISTPEV 184 LA V+ FF + ILG + G EH+ + W I V+ +W+ VL AIDE + P+ Sbjct 129 LAPVNTFFASHSILGNLRRGHEHYASEETAGEWTGIGAVVLDNWEKVLDAIDEAVVIPDS 188 Query 185 DAELSEKVAEEL-AEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDRDFW 243 DA+ + A AA+ E + T + AE+ D P D+ V W Sbjct 189 DADAVASAQSRVDAAVAAATAAAAAKEEGSVATAQEAENID-----PYDASV-------W 236 Query 244 LQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLADEHDHDLSD 303 GIDPIQI T YTLR +++++P+FLG G+I F + ++LAR+L D DHD++ Sbjct 237 AHAGIDPIQITVDGKTVYTLRSFVENQPVFLGSFGKIFTFNNRKSLARWLMDHDDHDIAK 296 Query 304 LSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRDIGDY 363 LST+ I+ A+ G+L V V DDN YVL+G+ +D A GPD+VD +Q+ AVEL D D+ Sbjct 297 LSTWQIIKDEASVGNLDVLVHDDNTYVLTGIKEDIAKGPDSVDVKQMGRAVELFADTADW 356 Query 364 SEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAPYAAAVREWEKLERFVESRLRR 419 + D +++ L + + Y+L P+AP+ V W+ LE + R + Sbjct 357 ARDDSMNATLLANPTFDRYIKYMLGNEGGYVPSAPFTDEVNGWKLLENTLTERFSK 412 >gi|258651557|ref|YP_003200713.1| hypothetical protein Namu_1321 [Nakamurella multipartita DSM 44233] gi|258554782|gb|ACV77724.1| hypothetical protein Namu_1321 [Nakamurella multipartita DSM 44233] Length=407 Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 151/399 (38%), Positives = 224/399 (57%), Gaps = 20/399 (5%) Query 1 MVADLVPIRLSLSAGDRYTLWAPRWRDAGDEWEAFLGKDDDLYGFESVSDLVAFVRTDTE 60 M AD++PI+L L+ G+ YTLWAP+W + G+EWEAFLG D LY F S + L AF+RT E Sbjct 1 MAADIIPIQLGLTEGNVYTLWAPQWLEDGEEWEAFLGHGDHLYVFPSPAHLAAFIRTSDE 60 Query 61 NDLVDHPAWQDLTGAHAHNLNPAEDNQFDLVVVEELLAEKPTAESVAALAASLAIVSAIG 120 +DL+DHP W L P +D+ FD+V V +L+AE P ++A+L ++AIV ++ Sbjct 61 HDLIDHPEWDTAAELLVDELRPDDDHIFDIVGVPDLMAEVPDIWTLASLTDTVAIVRSLA 120 Query 121 SVCELAAVSKFFNGNPILGTVSGGLEHFTGKAGNKRWNSIAEVIGRSWDDVLAAIDEIIS 180 VC+L V + + + G + F G+ G K WN + VI WD+V+ A+D +++ Sbjct 121 EVCDLEVVEEILDSADGFAVLPLGQQAFVGRNGEKLWNEMGAVIVERWDEVIDALDALVT 180 Query 181 TPEVDAELSEKVAEELAEEPEGAEEVAAEVEATQDTQEAAESDDEEADAPGDSVVLGGDR 240 PEVD AEEL + A + A + ++ + E + +E Sbjct 181 IPEVD-------AEELTQTKAEAAAINAVAKTSETVEPEEEEERDEDLE----------- 222 Query 241 DFWLQVGIDPIQIMTGTATFYTLRCYLDDRPIFLGRNGRISVFGSERALARYLAD-EHDH 299 FW + G+D ++I G T YTLRCYL D P+FL N RI ++ S L YL + + H Sbjct 223 -FWDETGVDCLEITIGERTGYTLRCYLGDDPVFLAENHRIQIYSSAEDLENYLMETDITH 281 Query 300 DLSDLSTYDDIRTAATDGSLAVAVTDDNVYVLSGLVDDFADGPDAVDREQLDLAVELLRD 359 +LS L +++IR A TDG AV +N Y L GL + +GP+AVD +QL+LAVELL D Sbjct 282 NLSTLQVWEEIRRAVTDGDAAVLAGPENTYRLDGLTESLREGPEAVDGKQLELAVELLID 341 Query 360 IGDYSEDSAVDKALETTRPLGQLVAYVLDPHSVGKPTAP 398 D+ +A+ ++ PLG L++ + P P +P Sbjct 342 AALERGDTETVEAVGSSTPLGNLISAITRPDPDRLPPSP 380 Lambda K H 0.315 0.133 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 849920012496 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40