BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3319
Length=263
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610455|ref|NP_217836.1| succinate dehydrogenase iron-sulfur... 541 4e-152
gi|31794500|ref|NP_856993.1| succinate dehydrogenase iron-sulfur... 540 1e-151
gi|289752017|ref|ZP_06511395.1| succinate dehydrogenase iron-sul... 539 1e-151
gi|224991740|ref|YP_002646429.1| succinate dehydrogenase iron-su... 538 4e-151
gi|183981222|ref|YP_001849513.1| succinate dehydrogenase (iron-s... 509 2e-142
gi|254820243|ref|ZP_05225244.1| succinate dehydrogenase iron-sul... 506 2e-141
gi|118617055|ref|YP_905387.1| succinate dehydrogenase iron-sulfu... 504 5e-141
gi|342861546|ref|ZP_08718193.1| succinate dehydrogenase iron-sul... 504 6e-141
gi|41409542|ref|NP_962378.1| succinate dehydrogenase iron-sulfur... 503 1e-140
gi|118464778|ref|YP_883438.1| succinate dehydrogenase iron-sulfu... 503 1e-140
gi|15827292|ref|NP_301555.1| succinate dehydrogenase iron-sulfur... 497 5e-139
gi|296168858|ref|ZP_06850530.1| succinate dehydrogenase [Mycobac... 491 6e-137
gi|240169113|ref|ZP_04747772.1| succinate dehydrogenase iron-sul... 486 1e-135
gi|118469821|ref|YP_886045.1| succinate dehydrogenase iron-sulfu... 470 1e-130
gi|169630755|ref|YP_001704404.1| succinate dehydrogenase iron-su... 464 7e-129
gi|120402592|ref|YP_952421.1| succinate dehydrogenase iron-sulfu... 459 2e-127
gi|145225425|ref|YP_001136103.1| succinate dehydrogenase iron-su... 457 5e-127
gi|262201718|ref|YP_003272926.1| succinate dehydrogenase and fum... 449 2e-124
gi|326381945|ref|ZP_08203638.1| succinate dehydrogenase iron-sul... 446 2e-123
gi|333991786|ref|YP_004524400.1| succinate dehydrogenase (iron-s... 444 6e-123
gi|126433855|ref|YP_001069546.1| succinate dehydrogenase iron-su... 444 8e-123
gi|108798198|ref|YP_638395.1| succinate dehydrogenase iron-sulfu... 442 2e-122
gi|296138693|ref|YP_003645936.1| succinate dehydrogenase and fum... 441 7e-122
gi|21615554|emb|CAD36476.1| succinate dehydrogenase [Rhodococcus... 437 1e-120
gi|343926653|ref|ZP_08766151.1| succinate dehydrogenase iron-sul... 436 1e-120
gi|333921575|ref|YP_004495156.1| succinate dehydrogenase [Amycol... 436 2e-120
gi|54022913|ref|YP_117155.1| succinate dehydrogenase iron-sulfur... 434 5e-120
gi|312140772|ref|YP_004008108.1| succinate dehydrogenase iron-su... 433 1e-119
gi|226305529|ref|YP_002765489.1| succinate dehydrogenase iron-su... 427 1e-117
gi|111023208|ref|YP_706180.1| succinate dehydrogenase iron-sulfu... 425 4e-117
gi|226359482|ref|YP_002777259.1| succinate dehydrogenase iron-su... 416 2e-114
gi|319949459|ref|ZP_08023519.1| succinate dehydrogenase iron-sul... 414 5e-114
gi|134103016|ref|YP_001108677.1| succinate dehydrogenase iron-su... 410 7e-113
gi|256380452|ref|YP_003104112.1| succinate dehydrogenase iron-su... 403 2e-110
gi|296394556|ref|YP_003659440.1| succinate dehydrogenase and fum... 400 1e-109
gi|317508110|ref|ZP_07965794.1| succinate dehydrogenase and fuma... 395 3e-108
gi|258651544|ref|YP_003200700.1| succinate dehydrogenase and fum... 381 7e-104
gi|257054604|ref|YP_003132436.1| succinate dehydrogenase subunit... 380 9e-104
gi|300782780|ref|YP_003763071.1| succinate dehydrogenase iron-su... 375 3e-102
gi|302524157|ref|ZP_07276499.1| succinate dehydrogenase iron-sul... 374 9e-102
gi|167968955|ref|ZP_02551232.1| succinate dehydrogenase iron-sul... 373 1e-101
gi|111220648|ref|YP_711442.1| succinate dehydrogenase iron-sulfu... 358 5e-97
gi|336177045|ref|YP_004582420.1| succinate dehydrogenase and fum... 356 2e-96
gi|86739391|ref|YP_479791.1| succinate dehydrogenase iron-sulfur... 347 1e-93
gi|295838570|ref|ZP_06825503.1| succinate dehydrogenase, iron-su... 345 3e-93
gi|334336484|ref|YP_004541636.1| succinate dehydrogenase and fum... 345 4e-93
gi|337767745|emb|CCB76456.1| Succinate dehydrogenase iron-sulfur... 344 9e-93
gi|302536395|ref|ZP_07288737.1| succinate dehydrogenase iron-sul... 340 8e-92
gi|328884578|emb|CCA57817.1| Succinate dehydrogenase iron-sulfur... 340 1e-91
gi|269955787|ref|YP_003325576.1| succinate dehydrogenase and fum... 340 1e-91
>gi|15610455|ref|NP_217836.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis
H37Rv]
gi|15842911|ref|NP_337948.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis
CDC1551]
gi|148663183|ref|YP_001284706.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis
H37Ra]
68 more sequence titles
Length=263
Score = 541 bits (1394), Expect = 4e-152, Method: Compositional matrix adjust.
Identities = 263/263 (100%), Positives = 263/263 (100%), Gaps = 0/263 (0%)
Query 1 MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLN 60
MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLN
Sbjct 1 MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLN 60
Query 61 LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVE 120
LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVE
Sbjct 61 LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVE 120
Query 121 PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA 180
PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA
Sbjct 121 PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA 180
Query 181 CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE 240
CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE
Sbjct 181 CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE 240
Query 241 SCPRGIEVTKAIQEVKRALMFTR 263
SCPRGIEVTKAIQEVKRALMFTR
Sbjct 241 SCPRGIEVTKAIQEVKRALMFTR 263
>gi|31794500|ref|NP_856993.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium bovis
AF2122/97]
gi|121639243|ref|YP_979467.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|31620096|emb|CAD95442.1| PROBABLE SUCCINATE DEHYDROGENASE (IRON-SULPHUR PROTEIN SUBUNIT)
SDHB (SUCCINIC DEHYDROGENASE) (FUMARATE REDUCTASE) (FUMARATE
DEHYDROGENASE) (FUMARIC HYDROGENASE) [Mycobacterium bovis
AF2122/97]
gi|121494891|emb|CAL73374.1| Probable succinate dehydrogenase (iron-sulphur protein subunit)
sdhB [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|341603268|emb|CCC65946.1| probable succinate dehydrogenase (iron-sulphur protein subunit)
SDHB (succinic dehydrogenase) (fumarate reductase) (fumarate
dehydrogenase) (fumaric hydrogenase) [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=263
Score = 540 bits (1390), Expect = 1e-151, Method: Compositional matrix adjust.
Identities = 262/263 (99%), Positives = 263/263 (100%), Gaps = 0/263 (0%)
Query 1 MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLN 60
MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPD+PDAFAATGGWQSFRVPCLPSDRLLN
Sbjct 1 MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDEPDAFAATGGWQSFRVPCLPSDRLLN 60
Query 61 LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVE 120
LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVE
Sbjct 61 LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVE 120
Query 121 PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA 180
PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA
Sbjct 121 PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA 180
Query 181 CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE 240
CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE
Sbjct 181 CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE 240
Query 241 SCPRGIEVTKAIQEVKRALMFTR 263
SCPRGIEVTKAIQEVKRALMFTR
Sbjct 241 SCPRGIEVTKAIQEVKRALMFTR 263
>gi|289752017|ref|ZP_06511395.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium
tuberculosis T92]
gi|289692604|gb|EFD60033.1| succinate dehydrogenase iron-sulfur protein subunit sdhB [Mycobacterium
tuberculosis T92]
Length=264
Score = 539 bits (1389), Expect = 1e-151, Method: Compositional matrix adjust.
Identities = 262/262 (100%), Positives = 262/262 (100%), Gaps = 0/262 (0%)
Query 1 MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLN 60
MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLN
Sbjct 1 MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLN 60
Query 61 LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVE 120
LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVE
Sbjct 61 LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVE 120
Query 121 PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA 180
PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA
Sbjct 121 PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA 180
Query 181 CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE 240
CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE
Sbjct 181 CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE 240
Query 241 SCPRGIEVTKAIQEVKRALMFT 262
SCPRGIEVTKAIQEVKRALMFT
Sbjct 241 SCPRGIEVTKAIQEVKRALMFT 262
>gi|224991740|ref|YP_002646429.1| succinate dehydrogenase iron-sulphur protein subunit [Mycobacterium
bovis BCG str. Tokyo 172]
gi|224774855|dbj|BAH27661.1| succinate dehydrogenase iron-sulphur protein subunit [Mycobacterium
bovis BCG str. Tokyo 172]
Length=263
Score = 538 bits (1386), Expect = 4e-151, Method: Compositional matrix adjust.
Identities = 261/263 (99%), Positives = 262/263 (99%), Gaps = 0/263 (0%)
Query 1 MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLN 60
MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPD+PDAFAATGGWQSFRVPCLPSDRLLN
Sbjct 1 MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDEPDAFAATGGWQSFRVPCLPSDRLLN 60
Query 61 LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVE 120
LLIYIKGYLDGTLTFRRSCAHGVCGSD MRINGVNRLACKVLMRDLLPKKKGKSLTVTVE
Sbjct 61 LLIYIKGYLDGTLTFRRSCAHGVCGSDTMRINGVNRLACKVLMRDLLPKKKGKSLTVTVE 120
Query 121 PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA 180
PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA
Sbjct 121 PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA 180
Query 181 CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE 240
CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE
Sbjct 181 CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE 240
Query 241 SCPRGIEVTKAIQEVKRALMFTR 263
SCPRGIEVTKAIQEVKRALMFTR
Sbjct 241 SCPRGIEVTKAIQEVKRALMFTR 263
>gi|183981222|ref|YP_001849513.1| succinate dehydrogenase (iron-sulphur protein subunit) SdhB [Mycobacterium
marinum M]
gi|183174548|gb|ACC39658.1| succinate dehydrogenase (iron-sulphur protein subunit) SdhB [Mycobacterium
marinum M]
Length=270
Score = 509 bits (1311), Expect = 2e-142, Method: Compositional matrix adjust.
Identities = 243/256 (95%), Positives = 253/256 (99%), Gaps = 0/256 (0%)
Query 8 ETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKG 67
++L PPLPPVPDGAVMVTVKIARFNPDDP+AFA+TGGWQSFRVPCLPSDRLLNLLIYIKG
Sbjct 15 DSLAPPLPPVPDGAVMVTVKIARFNPDDPEAFASTGGWQSFRVPCLPSDRLLNLLIYIKG 74
Query 68 YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPV 127
YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKK GK LT+TVEPIRGLPV
Sbjct 75 YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKPGKQLTLTVEPIRGLPV 134
Query 128 EKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCP 187
EKDLVVDMEPFFDAYRA+KPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCP
Sbjct 135 EKDLVVDMEPFFDAYRAVKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCP 194
Query 188 VFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIE 247
VFW+EGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE+CPRGIE
Sbjct 195 VFWNEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTEACPRGIE 254
Query 248 VTKAIQEVKRALMFTR 263
VTKAIQEVKRAL+F+R
Sbjct 255 VTKAIQEVKRALLFSR 270
>gi|254820243|ref|ZP_05225244.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium intracellulare
ATCC 13950]
Length=265
Score = 506 bits (1302), Expect = 2e-141, Method: Compositional matrix adjust.
Identities = 237/260 (92%), Positives = 251/260 (97%), Gaps = 0/260 (0%)
Query 4 EPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLI 63
EP E+L+PPLPPVPD AVMVTVKIARFNPD PDA+A TGGWQSFRVPCLPSDR+LNLLI
Sbjct 6 EPQAESLEPPLPPVPDEAVMVTVKIARFNPDQPDAYAETGGWQSFRVPCLPSDRMLNLLI 65
Query 64 YIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIR 123
YIK YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKK GK LT+TVEPIR
Sbjct 66 YIKSYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKAGKPLTITVEPIR 125
Query 124 GLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCT 183
GLPVEKDLVVDMEPFFDAYRA+KPYLIT+GNPPTRERIQSPTDRARYDDTTKCILCA CT
Sbjct 126 GLPVEKDLVVDMEPFFDAYRAVKPYLITTGNPPTRERIQSPTDRARYDDTTKCILCAACT 185
Query 184 TSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCP 243
TSCP+FWHEGSY+GPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE+CP
Sbjct 186 TSCPIFWHEGSYYGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTEACP 245
Query 244 RGIEVTKAIQEVKRALMFTR 263
RGI++TKAIQEVKRA+MF+R
Sbjct 246 RGIQITKAIQEVKRAIMFSR 265
>gi|118617055|ref|YP_905387.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium ulcerans
Agy99]
gi|118569165|gb|ABL03916.1| succinate dehydrogenase (iron-sulphur protein subunit) SdhB [Mycobacterium
ulcerans Agy99]
Length=268
Score = 504 bits (1298), Expect = 5e-141, Method: Compositional matrix adjust.
Identities = 239/256 (94%), Positives = 251/256 (99%), Gaps = 0/256 (0%)
Query 8 ETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKG 67
++L PPLPPVPDGAVMVTVKIAR+NPDDP+AFA+TGGWQSFRVPCLPSDRLLNLLIYIKG
Sbjct 13 DSLAPPLPPVPDGAVMVTVKIARYNPDDPEAFASTGGWQSFRVPCLPSDRLLNLLIYIKG 72
Query 68 YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPV 127
YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKK GK LT+TVEPIRGLPV
Sbjct 73 YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKSGKQLTLTVEPIRGLPV 132
Query 128 EKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCP 187
EKDLVVDMEPFFDAYRA+KPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCP
Sbjct 133 EKDLVVDMEPFFDAYRAVKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCP 192
Query 188 VFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIE 247
VFW+EGSY GPAAIVNAHRFIFDSRDEAAAER+DILNEVDGVWRCRTTFNCTE+CPRGIE
Sbjct 193 VFWNEGSYLGPAAIVNAHRFIFDSRDEAAAERVDILNEVDGVWRCRTTFNCTEACPRGIE 252
Query 248 VTKAIQEVKRALMFTR 263
TKAIQEVKRAL+F+R
Sbjct 253 ATKAIQEVKRALLFSR 268
>gi|342861546|ref|ZP_08718193.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium colombiense
CECT 3035]
gi|342131035|gb|EGT84324.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium colombiense
CECT 3035]
Length=270
Score = 504 bits (1297), Expect = 6e-141, Method: Compositional matrix adjust.
Identities = 238/259 (92%), Positives = 252/259 (98%), Gaps = 1/259 (0%)
Query 6 DVET-LDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIY 64
+VET LDPPLP +PDGAVMVTVKIARFNPD PDAFA TGGWQSFRVPCLPSDR+LNLLIY
Sbjct 12 EVETSLDPPLPAIPDGAVMVTVKIARFNPDQPDAFAETGGWQSFRVPCLPSDRMLNLLIY 71
Query 65 IKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRG 124
IK YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKK GK+LT+TVEPIRG
Sbjct 72 IKSYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKPGKALTITVEPIRG 131
Query 125 LPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTT 184
LPVEKDLVVDMEPFFDAYRA+KPYL+T+GNPPTRERIQSPTDRARYDDTTKCILCA CTT
Sbjct 132 LPVEKDLVVDMEPFFDAYRAVKPYLVTTGNPPTRERIQSPTDRARYDDTTKCILCAACTT 191
Query 185 SCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPR 244
SCP+FWHEGSY+GPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE+CPR
Sbjct 192 SCPIFWHEGSYYGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTEACPR 251
Query 245 GIEVTKAIQEVKRALMFTR 263
GIE+TKAIQEVKRA+MF+R
Sbjct 252 GIEITKAIQEVKRAIMFSR 270
>gi|41409542|ref|NP_962378.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium avium
subsp. paratuberculosis K-10]
gi|41398373|gb|AAS05994.1| SdhB [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336459590|gb|EGO38525.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Mycobacterium avium subsp. paratuberculosis S397]
Length=267
Score = 503 bits (1295), Expect = 1e-140, Method: Compositional matrix adjust.
Identities = 242/267 (91%), Positives = 254/267 (96%), Gaps = 4/267 (1%)
Query 1 MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLN 60
MSVEPDVETL+PPLPPVPD AVMVTVKIARFNPD PDA+A TGGWQSFRVPCLPSDR+LN
Sbjct 1 MSVEPDVETLEPPLPPVPDEAVMVTVKIARFNPDQPDAYAETGGWQSFRVPCLPSDRMLN 60
Query 61 LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKK----GKSLT 116
LLIYIK YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLP+ K GK LT
Sbjct 61 LLIYIKSYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPEPKKGKPGKPLT 120
Query 117 VTVEPIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKC 176
+TVEPIRGLPVEKDLVVDMEPFFDAYRA+KPYLIT+GNPPTRERIQSP DRARYDDTTKC
Sbjct 121 ITVEPIRGLPVEKDLVVDMEPFFDAYRAVKPYLITTGNPPTRERIQSPADRARYDDTTKC 180
Query 177 ILCACCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTF 236
ILCA CTTSCPVFWHEGSY+GPAAIVNAHRFIFDSRDE AAERLDILNEVDGVWRCRTTF
Sbjct 181 ILCAACTTSCPVFWHEGSYYGPAAIVNAHRFIFDSRDEGAAERLDILNEVDGVWRCRTTF 240
Query 237 NCTESCPRGIEVTKAIQEVKRALMFTR 263
NCT++CPRGIEVTKAIQEVKRA+MF+R
Sbjct 241 NCTDACPRGIEVTKAIQEVKRAIMFSR 267
>gi|118464778|ref|YP_883438.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium avium
104]
gi|254776733|ref|ZP_05218249.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium avium
subsp. avium ATCC 25291]
gi|118166065|gb|ABK66962.1| succinate dehydrogenase [Mycobacterium avium 104]
Length=267
Score = 503 bits (1294), Expect = 1e-140, Method: Compositional matrix adjust.
Identities = 241/267 (91%), Positives = 254/267 (96%), Gaps = 4/267 (1%)
Query 1 MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLN 60
MSVEPDVETL+PPLPPVPD AVMVTVKIARFNPD PDA+A TGGWQSFRVPCLPSDR+LN
Sbjct 1 MSVEPDVETLEPPLPPVPDEAVMVTVKIARFNPDQPDAYAETGGWQSFRVPCLPSDRMLN 60
Query 61 LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKK----GKSLT 116
LLIYIK YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLP+ K GK LT
Sbjct 61 LLIYIKSYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPEPKKGKPGKPLT 120
Query 117 VTVEPIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKC 176
+TVEPIRGLPVEKDLVVDMEPFFDAYRA+KPYLIT+GNPPTRERIQSP DRARYDDTTKC
Sbjct 121 ITVEPIRGLPVEKDLVVDMEPFFDAYRAVKPYLITTGNPPTRERIQSPADRARYDDTTKC 180
Query 177 ILCACCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTF 236
ILCA CTTSCP+FWHEGSY+GPAAIVNAHRFIFDSRDE AAERLDILNEVDGVWRCRTTF
Sbjct 181 ILCAACTTSCPIFWHEGSYYGPAAIVNAHRFIFDSRDEGAAERLDILNEVDGVWRCRTTF 240
Query 237 NCTESCPRGIEVTKAIQEVKRALMFTR 263
NCT++CPRGIEVTKAIQEVKRA+MF+R
Sbjct 241 NCTDACPRGIEVTKAIQEVKRAIMFSR 267
>gi|15827292|ref|NP_301555.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium leprae
TN]
gi|221229770|ref|YP_002503186.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium leprae
Br4923]
gi|467181|gb|AAA17339.1| L308_F1_28 [Mycobacterium leprae]
gi|13092841|emb|CAC30205.1| succinate dehydrogenase iron-sulfur protein [Mycobacterium leprae]
gi|219932877|emb|CAR70790.1| succinate dehydrogenase iron-sulfur protein [Mycobacterium leprae
Br4923]
Length=264
Score = 497 bits (1280), Expect = 5e-139, Method: Compositional matrix adjust.
Identities = 237/264 (90%), Positives = 253/264 (96%), Gaps = 1/264 (0%)
Query 1 MSVEP-DVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLL 59
M+VEP +V++L+PP PP+ D AVMVTVKIARFNPD+PDAFA TGGWQSFRVPCLP+DRLL
Sbjct 1 MAVEPVEVKSLEPPRPPISDDAVMVTVKIARFNPDNPDAFAETGGWQSFRVPCLPTDRLL 60
Query 60 NLLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTV 119
NLLIYIKGYLDGTLTFRRSCAHGVCGSDAMR+NGVNRLACKVLMRDLLPKK GK+LT+TV
Sbjct 61 NLLIYIKGYLDGTLTFRRSCAHGVCGSDAMRVNGVNRLACKVLMRDLLPKKAGKNLTITV 120
Query 120 EPIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILC 179
EPIRGLPVEKDLVVDMEPFFDAYRA+KPYLITSGNPPTRERIQSPTDRARYDDTTKCILC
Sbjct 121 EPIRGLPVEKDLVVDMEPFFDAYRAVKPYLITSGNPPTRERIQSPTDRARYDDTTKCILC 180
Query 180 ACCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCT 239
ACCTTSCPVFW EG+Y+GPAAIVNAHRFIFDSRDE A ERL +LNEVDGVWRCRTTFNCT
Sbjct 181 ACCTTSCPVFWSEGTYYGPAAIVNAHRFIFDSRDEGAGERLTLLNEVDGVWRCRTTFNCT 240
Query 240 ESCPRGIEVTKAIQEVKRALMFTR 263
ESCPR IEVTKAIQEVKRALMF+R
Sbjct 241 ESCPRNIEVTKAIQEVKRALMFSR 264
>gi|296168858|ref|ZP_06850530.1| succinate dehydrogenase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896475|gb|EFG76125.1| succinate dehydrogenase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=276
Score = 491 bits (1263), Expect = 6e-137, Method: Compositional matrix adjust.
Identities = 231/249 (93%), Positives = 242/249 (98%), Gaps = 0/249 (0%)
Query 15 PPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLT 74
PPVP+GAV+VT+KIARFNPD PDA A TGGWQSFRVPCLPSDRLLNLLIYIK YLDGTLT
Sbjct 28 PPVPEGAVLVTLKIARFNPDQPDAIAETGGWQSFRVPCLPSDRLLNLLIYIKSYLDGTLT 87
Query 75 FRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVD 134
FRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKK GK LT+TVEPIRGLPVEKDLVV+
Sbjct 88 FRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKAGKQLTITVEPIRGLPVEKDLVVN 147
Query 135 MEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS 194
MEPFFDAYRA+KPYL+T+GNPPTRERIQSPTDRARYDDTTKCILCA CTTSCPVFWHEGS
Sbjct 148 MEPFFDAYRAVKPYLVTTGNPPTRERIQSPTDRARYDDTTKCILCAACTTSCPVFWHEGS 207
Query 195 YFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQE 254
Y+GPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE+CPRGI+VTKAIQE
Sbjct 208 YYGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTEACPRGIQVTKAIQE 267
Query 255 VKRALMFTR 263
VKRALMFTR
Sbjct 268 VKRALMFTR 276
>gi|240169113|ref|ZP_04747772.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium kansasii
ATCC 12478]
Length=275
Score = 486 bits (1252), Expect = 1e-135, Method: Compositional matrix adjust.
Identities = 231/251 (93%), Positives = 242/251 (97%), Gaps = 0/251 (0%)
Query 13 PLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGT 72
PLPPVP+GAVMVTVKIARFNPDDP+ + TGGWQSFRVPCLPSDRL+NLLIYIKGYLDGT
Sbjct 25 PLPPVPEGAVMVTVKIARFNPDDPERYTETGGWQSFRVPCLPSDRLINLLIYIKGYLDGT 84
Query 73 LTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLV 132
LTFRRSC HGVCGSDAMRINGVNRLACKVLMRDLLPKK GK LT+TVEPIRGLPVEKDLV
Sbjct 85 LTFRRSCGHGVCGSDAMRINGVNRLACKVLMRDLLPKKPGKQLTITVEPIRGLPVEKDLV 144
Query 133 VDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHE 192
VDMEPFF+AYRA+KPYLITSGNPPTRERIQS TDRARYDDTTKCILCA CTTSCPVFW+E
Sbjct 145 VDMEPFFEAYRAVKPYLITSGNPPTRERIQSQTDRARYDDTTKCILCAACTTSCPVFWNE 204
Query 193 GSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAI 252
GSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCT++CPRGI VTKAI
Sbjct 205 GSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTDACPRGIAVTKAI 264
Query 253 QEVKRALMFTR 263
QEVKRALMF+R
Sbjct 265 QEVKRALMFSR 275
>gi|118469821|ref|YP_886045.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium smegmatis
str. MC2 155]
gi|118171108|gb|ABK72004.1| succinate dehydrogenase, iron-sulfur protein [Mycobacterium smegmatis
str. MC2 155]
Length=261
Score = 470 bits (1209), Expect = 1e-130, Method: Compositional matrix adjust.
Identities = 223/256 (88%), Positives = 240/256 (94%), Gaps = 4/256 (1%)
Query 8 ETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKG 67
E DP LPPVP+GAVMVT+KIARFNP++PDA GWQSFRVPCLPSDRLLNLL Y+K
Sbjct 10 EAGDPELPPVPEGAVMVTLKIARFNPENPDA----AGWQSFRVPCLPSDRLLNLLHYVKW 65
Query 68 YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPV 127
YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRD+LPK K LT+T+EPIRGLPV
Sbjct 66 YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDMLPKNPNKQLTITIEPIRGLPV 125
Query 128 EKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCP 187
EKDLVV+MEPFFDAYRA+KP+L+TSGNPPT+ERIQSPTDRARYDDTTKCILCACCTTSCP
Sbjct 126 EKDLVVNMEPFFDAYRAVKPFLVTSGNPPTKERIQSPTDRARYDDTTKCILCACCTTSCP 185
Query 188 VFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIE 247
V+W EGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE+CPRGI+
Sbjct 186 VYWSEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTEACPRGIQ 245
Query 248 VTKAIQEVKRALMFTR 263
VT+AIQEVKRALMF R
Sbjct 246 VTQAIQEVKRALMFAR 261
>gi|169630755|ref|YP_001704404.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium abscessus
ATCC 19977]
gi|169242722|emb|CAM63750.1| Probable succinate dehydrogenase (iron-sulphur protein) SdhB
[Mycobacterium abscessus]
Length=260
Score = 464 bits (1193), Expect = 7e-129, Method: Compositional matrix adjust.
Identities = 221/262 (85%), Positives = 241/262 (92%), Gaps = 4/262 (1%)
Query 2 SVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNL 61
+V E DPPLPPVP+GAVMV +KI RFNP+DPDA GWQ+FRVPCLP+DRLLNL
Sbjct 3 AVIEKAEAGDPPLPPVPEGAVMVDLKIQRFNPEDPDA----AGWQTFRVPCLPTDRLLNL 58
Query 62 LIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEP 121
L+Y+KGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPK K+LT+T+EP
Sbjct 59 LLYVKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKNPKKTLTITIEP 118
Query 122 IRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCAC 181
IRGLPVEKDLVV+MEPFFDAYRA+KP++ITSGN PTRE IQS TDRAR+DDTTKCILCAC
Sbjct 119 IRGLPVEKDLVVNMEPFFDAYRAVKPFMITSGNQPTREYIQSQTDRARFDDTTKCILCAC 178
Query 182 CTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTES 241
CTTSCPVFW +GSYFGPAAIVNAHRFIFDSRDEAAAERLDILN+VDGVWRCRTTFNCT++
Sbjct 179 CTTSCPVFWSDGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNDVDGVWRCRTTFNCTDA 238
Query 242 CPRGIEVTKAIQEVKRALMFTR 263
CPRGIEVTKAIQEVKRALMF R
Sbjct 239 CPRGIEVTKAIQEVKRALMFAR 260
>gi|120402592|ref|YP_952421.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium vanbaalenii
PYR-1]
gi|119955410|gb|ABM12415.1| succinate dehydrogenase subunit B [Mycobacterium vanbaalenii
PYR-1]
Length=256
Score = 459 bits (1182), Expect = 2e-127, Method: Compositional matrix adjust.
Identities = 220/250 (88%), Positives = 233/250 (94%), Gaps = 4/250 (1%)
Query 14 LPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTL 73
LPPVP+GAVMVT+KIARFNP+ PD GWQSFRVPCLPSDRLLNLL Y+K YLDGTL
Sbjct 11 LPPVPEGAVMVTLKIARFNPESPD----DAGWQSFRVPCLPSDRLLNLLHYVKWYLDGTL 66
Query 74 TFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVV 133
TFRRSCAHGVCGSDAMRINGVNRLACKVLMRD+LPK K LT+T+EPIRGLPVEKDLVV
Sbjct 67 TFRRSCAHGVCGSDAMRINGVNRLACKVLMRDMLPKNPKKQLTITIEPIRGLPVEKDLVV 126
Query 134 DMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEG 193
DMEPFFDA+RAIKPYLITSGN PTRERIQS TDRARYDDTTKCILCACCTTSCPV+W+EG
Sbjct 127 DMEPFFDAFRAIKPYLITSGNQPTRERIQSQTDRARYDDTTKCILCACCTTSCPVYWNEG 186
Query 194 SYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQ 253
SYFGPAAIVNAHRFIFDSRDE AAERLDILN+VDGVWRCRTTFNCTE+CPRGI+VTKAIQ
Sbjct 187 SYFGPAAIVNAHRFIFDSRDEGAAERLDILNDVDGVWRCRTTFNCTEACPRGIQVTKAIQ 246
Query 254 EVKRALMFTR 263
EVKRALMF R
Sbjct 247 EVKRALMFAR 256
>gi|145225425|ref|YP_001136103.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium gilvum
PYR-GCK]
gi|315445773|ref|YP_004078652.1| succinate dehydrogenase subunit B [Mycobacterium sp. Spyr1]
gi|145217911|gb|ABP47315.1| succinate dehydrogenase subunit B [Mycobacterium gilvum PYR-GCK]
gi|315264076|gb|ADU00818.1| succinate dehydrogenase subunit B [Mycobacterium sp. Spyr1]
Length=256
Score = 457 bits (1177), Expect = 5e-127, Method: Compositional matrix adjust.
Identities = 218/249 (88%), Positives = 232/249 (94%), Gaps = 4/249 (1%)
Query 15 PPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLT 74
PPVP+GAVMVT+KIARFNP+ PD GWQSFRVPCLPSDRLLNLL Y+K YLDGTLT
Sbjct 12 PPVPEGAVMVTLKIARFNPESPD----DAGWQSFRVPCLPSDRLLNLLHYVKWYLDGTLT 67
Query 75 FRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVD 134
FRRSCAHGVCGSDAMRINGVNRLACKVLMRD+LPK K LT+T+EPIRGLPVEKDLVVD
Sbjct 68 FRRSCAHGVCGSDAMRINGVNRLACKVLMRDMLPKNPNKQLTITIEPIRGLPVEKDLVVD 127
Query 135 MEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS 194
MEPFFDA+RA+KPYLITSGN PTRERIQS TDRARYDDTTKCILCACCTTSCPV+W EGS
Sbjct 128 MEPFFDAFRAVKPYLITSGNQPTRERIQSQTDRARYDDTTKCILCACCTTSCPVYWSEGS 187
Query 195 YFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQE 254
YFGPAAIVNAHRFIFDSRDEAAAERLDILN++DGVWRCRTTFNCTE+CPRGI+VTKAIQE
Sbjct 188 YFGPAAIVNAHRFIFDSRDEAAAERLDILNDIDGVWRCRTTFNCTEACPRGIQVTKAIQE 247
Query 255 VKRALMFTR 263
VKRALMF R
Sbjct 248 VKRALMFAR 256
>gi|262201718|ref|YP_003272926.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Gordonia bronchialis DSM 43247]
gi|262085065|gb|ACY21033.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Gordonia bronchialis DSM 43247]
Length=262
Score = 449 bits (1156), Expect = 2e-124, Method: Compositional matrix adjust.
Identities = 210/253 (84%), Positives = 236/253 (94%), Gaps = 4/253 (1%)
Query 11 DPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLD 70
+PPLP VPD A MVT+KI RFNP+DPDA G++SFRVP LP+DRLLNLL+Y+KGYLD
Sbjct 14 EPPLPEVPDEATMVTLKIFRFNPEDPDA----QGYESFRVPALPTDRLLNLLLYVKGYLD 69
Query 71 GTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKD 130
GTLTFRRSCAHGVCGSDAMR+NGVNRLACK+LM+D+LPK K K +T+T+EPI+GLPVEKD
Sbjct 70 GTLTFRRSCAHGVCGSDAMRVNGVNRLACKLLMKDMLPKDKSKEITITIEPIKGLPVEKD 129
Query 131 LVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFW 190
LVV+MEPFFDAYRAIKP+LITSGN PTRERIQS TDRAR+DDTTKCILCACCTTSCPVFW
Sbjct 130 LVVNMEPFFDAYRAIKPFLITSGNEPTRERIQSATDRARFDDTTKCILCACCTTSCPVFW 189
Query 191 HEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTK 250
+EGSYFGPAAIVNAHRFIFDSRDE A ERLDILN+VDGVWRCRTTFNCT++CPRGI+VT+
Sbjct 190 NEGSYFGPAAIVNAHRFIFDSRDEGAVERLDILNDVDGVWRCRTTFNCTDACPRGIQVTQ 249
Query 251 AIQEVKRALMFTR 263
AIQEVKRALMF+R
Sbjct 250 AIQEVKRALMFSR 262
>gi|326381945|ref|ZP_08203638.1| succinate dehydrogenase iron-sulfur subunit [Gordonia neofelifaecis
NRRL B-59395]
gi|326199371|gb|EGD56552.1| succinate dehydrogenase iron-sulfur subunit [Gordonia neofelifaecis
NRRL B-59395]
Length=261
Score = 446 bits (1147), Expect = 2e-123, Method: Compositional matrix adjust.
Identities = 211/262 (81%), Positives = 236/262 (91%), Gaps = 4/262 (1%)
Query 2 SVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNL 61
++E T +PPLPPVP A MVT+KI RFNP+DPDA G++SFRVP LP+DRLLNL
Sbjct 4 TLESTPATNEPPLPPVPAEATMVTLKIYRFNPEDPDA----QGFESFRVPALPTDRLLNL 59
Query 62 LIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEP 121
L+Y+KGYLDG+LTFRRSCAHGVCGSDAMRING NRLACK+LM+DLLPK K +T+T+EP
Sbjct 60 LLYVKGYLDGSLTFRRSCAHGVCGSDAMRINGTNRLACKLLMKDLLPKDSSKEITITIEP 119
Query 122 IRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCAC 181
I+GLPVEKDLVVDMEPFFDAYRAIKP+LITSGN PT ERIQS DRAR+DDTTKCILCAC
Sbjct 120 IKGLPVEKDLVVDMEPFFDAYRAIKPFLITSGNEPTYERIQSQADRARFDDTTKCILCAC 179
Query 182 CTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTES 241
CTTSCPVFW+EGSYFGPAAIVNAHRFIFDSRDE AAERLDILN+VDGVWRCRTTFNCT++
Sbjct 180 CTTSCPVFWNEGSYFGPAAIVNAHRFIFDSRDEGAAERLDILNDVDGVWRCRTTFNCTDA 239
Query 242 CPRGIEVTKAIQEVKRALMFTR 263
CPRGI+VT+AIQEVKRALMF R
Sbjct 240 CPRGIQVTQAIQEVKRALMFAR 261
>gi|333991786|ref|YP_004524400.1| succinate dehydrogenase (iron-sulfur protein subunit) SdhB [Mycobacterium
sp. JDM601]
gi|333487754|gb|AEF37146.1| succinate dehydrogenase (iron-sulfur protein subunit) SdhB [Mycobacterium
sp. JDM601]
Length=263
Score = 444 bits (1142), Expect = 6e-123, Method: Compositional matrix adjust.
Identities = 207/247 (84%), Positives = 228/247 (93%), Gaps = 0/247 (0%)
Query 17 VPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFR 76
VP+GA MVT+KIAR+NP++PD +AAT GWQSFRVP LP+DRLLNLLIY+K YLDGTLTFR
Sbjct 17 VPEGARMVTLKIARYNPENPDQYAATDGWQSFRVPALPTDRLLNLLIYVKSYLDGTLTFR 76
Query 77 RSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDME 136
RSCAHGVCGSD +R+NG N+LACK+LMRD+LPKK GK LT+T+EP+RGLPVEKDLVVDME
Sbjct 77 RSCAHGVCGSDGVRVNGNNKLACKMLMRDILPKKPGKELTLTIEPMRGLPVEKDLVVDME 136
Query 137 PFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYF 196
PF DAY+AIKPYLITSGNPPTRE IQS DR RYDDTTKCILC CTTSCPV+W EGSYF
Sbjct 137 PFMDAYKAIKPYLITSGNPPTREWIQSQHDRHRYDDTTKCILCGICTTSCPVYWSEGSYF 196
Query 197 GPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVK 256
GPAAIVNAHRFIFDSRDE AAERLDILNEVDGVWRCRTTFNCT++CPRGIE+TKAIQEVK
Sbjct 197 GPAAIVNAHRFIFDSRDEGAAERLDILNEVDGVWRCRTTFNCTDACPRGIEITKAIQEVK 256
Query 257 RALMFTR 263
RALMF R
Sbjct 257 RALMFAR 263
>gi|126433855|ref|YP_001069546.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium sp.
JLS]
gi|126233655|gb|ABN97055.1| succinate dehydrogenase subunit B [Mycobacterium sp. JLS]
Length=258
Score = 444 bits (1141), Expect = 8e-123, Method: Compositional matrix adjust.
Identities = 210/259 (82%), Positives = 231/259 (90%), Gaps = 4/259 (1%)
Query 5 PDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIY 64
P +E + PPVP+GAVMVT+KIARFNP+ PD G+QSFRVPCLP+DRLLNLL Y
Sbjct 4 PAIEKNEATTPPVPEGAVMVTLKIARFNPEAPD----DAGFQSFRVPCLPTDRLLNLLHY 59
Query 65 IKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRG 124
+K YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRD+LPK K LT+T+EPIRG
Sbjct 60 VKWYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDMLPKNPKKQLTITIEPIRG 119
Query 125 LPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTT 184
LPVEKDLVVDMEPFFDAYRA+KPYL+TSGN PT+ERIQS DRARYDDTTKCILCA CTT
Sbjct 120 LPVEKDLVVDMEPFFDAYRAVKPYLMTSGNQPTKERIQSQVDRARYDDTTKCILCAACTT 179
Query 185 SCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPR 244
SCP++W EGSY GPAAIVNAHRFIFDSRDE AAERLDILN+ DGVWRCRTTFNCTE+CPR
Sbjct 180 SCPIYWTEGSYVGPAAIVNAHRFIFDSRDEGAAERLDILNDADGVWRCRTTFNCTEACPR 239
Query 245 GIEVTKAIQEVKRALMFTR 263
GI++T+AIQEVKRALMF R
Sbjct 240 GIQITQAIQEVKRALMFAR 258
>gi|108798198|ref|YP_638395.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium sp.
MCS]
gi|119867294|ref|YP_937246.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium sp.
KMS]
gi|108768617|gb|ABG07339.1| succinate dehydrogenase subunit B [Mycobacterium sp. MCS]
gi|119693383|gb|ABL90456.1| succinate dehydrogenase subunit B [Mycobacterium sp. KMS]
Length=258
Score = 442 bits (1138), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 209/259 (81%), Positives = 231/259 (90%), Gaps = 4/259 (1%)
Query 5 PDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIY 64
P +E + PP+P+GAVMVT+KIARFNP+ PD G+QSFRVPCLP+DRLLNLL Y
Sbjct 4 PAIEKNEATTPPMPEGAVMVTLKIARFNPEAPD----DAGFQSFRVPCLPTDRLLNLLHY 59
Query 65 IKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRG 124
+K YLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRD+LPK K LT+T+EPIRG
Sbjct 60 VKWYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDMLPKNPKKQLTITIEPIRG 119
Query 125 LPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTT 184
LPVEKDLVVDMEPFFDAYRA+KPYL+TSGN PT+ERIQS DRARYDDTTKCILCA CTT
Sbjct 120 LPVEKDLVVDMEPFFDAYRAVKPYLMTSGNQPTKERIQSQVDRARYDDTTKCILCAACTT 179
Query 185 SCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPR 244
SCP++W EGSY GPAAIVNAHRFIFDSRDE AAERLDILN+ DGVWRCRTTFNCTE+CPR
Sbjct 180 SCPIYWTEGSYVGPAAIVNAHRFIFDSRDEGAAERLDILNDADGVWRCRTTFNCTEACPR 239
Query 245 GIEVTKAIQEVKRALMFTR 263
GI++T+AIQEVKRALMF R
Sbjct 240 GIQITQAIQEVKRALMFAR 258
>gi|296138693|ref|YP_003645936.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Tsukamurella paurometabola DSM 20162]
gi|296026827|gb|ADG77597.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Tsukamurella paurometabola DSM 20162]
Length=256
Score = 441 bits (1133), Expect = 7e-122, Method: Compositional matrix adjust.
Identities = 207/249 (84%), Positives = 231/249 (93%), Gaps = 6/249 (2%)
Query 15 PPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLT 74
PPVP G+ MVT+K+ RFNP+DPDA GWQS++VP LPSDR LNLL+YIKGYLDGTLT
Sbjct 14 PPVPPGSTMVTIKVYRFNPEDPDA----AGWQSYKVPALPSDRFLNLLLYIKGYLDGTLT 69
Query 75 FRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVD 134
FRRSCAHGVCGSDAMRINGVNRLACK+LM+D L ++GK +T+TVEPIRGLPVEKDLVVD
Sbjct 70 FRRSCAHGVCGSDAMRINGVNRLACKMLMKDFL--QEGKEVTITVEPIRGLPVEKDLVVD 127
Query 135 MEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS 194
MEPFFDA+RA+KPYLITSGN PTRERIQSPTDR R+DDTTKCILCACCTTSCPV+W +GS
Sbjct 128 MEPFFDAFRAVKPYLITSGNEPTRERIQSPTDRERFDDTTKCILCACCTTSCPVYWMDGS 187
Query 195 YFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQE 254
YFGPAAIVNAHRFIFDSRDE AAERLDILN+VDGVWRCRTTFNCT++CPRGI+VTKAIQE
Sbjct 188 YFGPAAIVNAHRFIFDSRDEGAAERLDILNDVDGVWRCRTTFNCTDACPRGIQVTKAIQE 247
Query 255 VKRALMFTR 263
VKRAL+F+R
Sbjct 248 VKRALLFSR 256
>gi|21615554|emb|CAD36476.1| succinate dehydrogenase [Rhodococcus ruber]
Length=382
Score = 437 bits (1123), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 203/250 (82%), Positives = 229/250 (92%), Gaps = 5/250 (2%)
Query 14 LPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTL 73
LPPVP+GA MVT+KIARFNP+D W SF+VP LPSDR+LNLL+Y+KGYLDGTL
Sbjct 138 LPPVPEGATMVTLKIARFNPED----GKGQHWDSFQVPALPSDRMLNLLLYVKGYLDGTL 193
Query 74 TFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVV 133
TFRRSCAHGVCGSDAMRINGVNRLACK+LM+D+LPK GK +T+TVEPIRGLPVEKDLVV
Sbjct 194 TFRRSCAHGVCGSDAMRINGVNRLACKILMKDMLPKD-GKPVTITVEPIRGLPVEKDLVV 252
Query 134 DMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEG 193
DMEPFFDA+RA+KP+LI +GN PTRERIQS DRAR+DDTTKCILCACCTTSCPV+W++G
Sbjct 253 DMEPFFDAFRAVKPFLIATGNEPTRERIQSQADRARFDDTTKCILCACCTTSCPVYWNDG 312
Query 194 SYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQ 253
SYFGPAAIVNAHRFIFDSRDE AAERLDILN+V+GVWRCRTTFNCT++CPRGI+VTKAIQ
Sbjct 313 SYFGPAAIVNAHRFIFDSRDEGAAERLDILNDVEGVWRCRTTFNCTDACPRGIQVTKAIQ 372
Query 254 EVKRALMFTR 263
EVKRAL+F R
Sbjct 373 EVKRALLFAR 382
>gi|343926653|ref|ZP_08766151.1| succinate dehydrogenase iron-sulfur protein [Gordonia alkanivorans
NBRC 16433]
gi|343763405|dbj|GAA13077.1| succinate dehydrogenase iron-sulfur protein [Gordonia alkanivorans
NBRC 16433]
Length=262
Score = 436 bits (1122), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 203/243 (84%), Positives = 227/243 (94%), Gaps = 4/243 (1%)
Query 21 AVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRSCA 80
A MVT+KIARFNP++PDA GW+SFRVP LP+DRLLNLL+Y+KGYLDGTLTFRRSCA
Sbjct 24 ATMVTLKIARFNPENPDA----QGWESFRVPALPTDRLLNLLLYVKGYLDGTLTFRRSCA 79
Query 81 HGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFD 140
HGVCGSDAMRINGVNRLACK+LM+D+LPK K K +T+T+EPIRGLPVEKDLVVDMEPFFD
Sbjct 80 HGVCGSDAMRINGVNRLACKLLMKDMLPKDKSKEITITIEPIRGLPVEKDLVVDMEPFFD 139
Query 141 AYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGPAA 200
AYRAIKP+L+T+GN PTRERIQS +DRAR+DDTTKCILCACCTTSCPVFW EGSYFGPAA
Sbjct 140 AYRAIKPFLMTTGNEPTRERIQSQSDRARFDDTTKCILCACCTTSCPVFWTEGSYFGPAA 199
Query 201 IVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALM 260
IVNAHRFIFDSRDE A ERLDILN+VDGVWRCRTTFNCT++CPRGI+VT+AI EVKRALM
Sbjct 200 IVNAHRFIFDSRDEGAVERLDILNDVDGVWRCRTTFNCTDACPRGIQVTQAISEVKRALM 259
Query 261 FTR 263
F+R
Sbjct 260 FSR 262
>gi|333921575|ref|YP_004495156.1| succinate dehydrogenase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483796|gb|AEF42356.1| Succinate dehydrogenase [Amycolicicoccus subflavus DQS3-9A1]
Length=258
Score = 436 bits (1121), Expect = 2e-120, Method: Compositional matrix adjust.
Identities = 207/263 (79%), Positives = 235/263 (90%), Gaps = 5/263 (1%)
Query 1 MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLN 60
M+ + ET + LPPVP+GAVMVT++I RFNP+DPDA G+Q F VP LPSDRLLN
Sbjct 1 MTATVESETGERSLPPVPEGAVMVTLRIRRFNPEDPDA----QGFQEFEVPALPSDRLLN 56
Query 61 LLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVE 120
LL Y+K YLDGTLTFRRSCAHG+CGSDAMRINGVNRLACK+LM+D+L K GKS+T+TVE
Sbjct 57 LLHYVKWYLDGTLTFRRSCAHGICGSDAMRINGVNRLACKILMKDML-AKDGKSVTITVE 115
Query 121 PIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCA 180
PIRGLPVEKDL+VDMEPFFDA+RA+KP+LI G PTRERIQS +DRAR+DDTTKCILCA
Sbjct 116 PIRGLPVEKDLIVDMEPFFDAFRAVKPFLINYGQEPTRERIQSQSDRARFDDTTKCILCA 175
Query 181 CCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTE 240
CCTTSCPVFWH+GSYFGPAAIVNAHRFIFDSRDE AAERL+ILN++DGVWRCRTTFNCTE
Sbjct 176 CCTTSCPVFWHDGSYFGPAAIVNAHRFIFDSRDEGAAERLEILNDMDGVWRCRTTFNCTE 235
Query 241 SCPRGIEVTKAIQEVKRALMFTR 263
SCPRGI+VT+AIQEVKRAL+F R
Sbjct 236 SCPRGIQVTQAIQEVKRALLFAR 258
>gi|54022913|ref|YP_117155.1| succinate dehydrogenase iron-sulfur subunit [Nocardia farcinica
IFM 10152]
gi|54014421|dbj|BAD55791.1| putative succinate dehydrogenase iron-sulfur subunit [Nocardia
farcinica IFM 10152]
Length=257
Score = 434 bits (1117), Expect = 5e-120, Method: Compositional matrix adjust.
Identities = 205/248 (83%), Positives = 227/248 (92%), Gaps = 5/248 (2%)
Query 16 PVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTF 75
PVP+G+ M+TVK+ARFNP+D W+SF+VP LP+DR LN+LIYIK YLDGTLTF
Sbjct 15 PVPEGSTMITVKVARFNPEDGQG----AHWESFQVPVLPTDRFLNVLIYIKSYLDGTLTF 70
Query 76 RRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDM 135
RRSCAHGVCGSDAMRINGVNRLACKVLM+D+LPK GKS+TVTVEPIRGLPVEKDLVVDM
Sbjct 71 RRSCAHGVCGSDAMRINGVNRLACKVLMKDMLPKD-GKSITVTVEPIRGLPVEKDLVVDM 129
Query 136 EPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSY 195
EPFFDA+RA+KPYLITSGN PTRERIQS DRAR+DDTTKCILCACCTTSCPV+WH+GSY
Sbjct 130 EPFFDAFRAVKPYLITSGNEPTRERIQSQADRARFDDTTKCILCACCTTSCPVYWHDGSY 189
Query 196 FGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEV 255
FGPAAIVNAHRFIFDSRDE A ERLDILN+V+GVWRCRTTFNCT++CPRGIEVTKAIQEV
Sbjct 190 FGPAAIVNAHRFIFDSRDEGARERLDILNDVEGVWRCRTTFNCTDACPRGIEVTKAIQEV 249
Query 256 KRALMFTR 263
KRAL+F R
Sbjct 250 KRALLFAR 257
>gi|312140772|ref|YP_004008108.1| succinate dehydrogenase iron-sulfur subunit sdhb2 [Rhodococcus
equi 103S]
gi|325675588|ref|ZP_08155272.1| succinate dehydrogenase [Rhodococcus equi ATCC 33707]
gi|311890111|emb|CBH49429.1| succinate dehydrogenase iron-sulfur subunit SdhB2 [Rhodococcus
equi 103S]
gi|325553559|gb|EGD23237.1| succinate dehydrogenase [Rhodococcus equi ATCC 33707]
Length=258
Score = 433 bits (1113), Expect = 1e-119, Method: Compositional matrix adjust.
Identities = 205/250 (82%), Positives = 231/250 (93%), Gaps = 5/250 (2%)
Query 14 LPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTL 73
LPPVP+GAVMVT+KIARFNP+D + W+SF+VP LP+DRLLNLL+Y+KGYLDGTL
Sbjct 13 LPPVPEGAVMVTLKIARFNPEDGEG----QRWESFQVPTLPTDRLLNLLLYVKGYLDGTL 68
Query 74 TFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVV 133
TFRRSCAHGVCGSDAMRINGVNRLACKVLMRD+LPK GK +T+TVEPI+GLPVEKDL+V
Sbjct 69 TFRRSCAHGVCGSDAMRINGVNRLACKVLMRDMLPKD-GKPITITVEPIKGLPVEKDLLV 127
Query 134 DMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEG 193
DMEPFFDA+RA+KP+LIT+GN PTRERIQS DRAR+DDTTKCILCACCTTSCPV+W +G
Sbjct 128 DMEPFFDAFRAVKPFLITTGNEPTRERIQSQADRARFDDTTKCILCACCTTSCPVYWSDG 187
Query 194 SYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQ 253
SYFGPAAIVNAHRFIFDSRDE AAERLDILN+ DGVWRCRTTFNCT++CPRGI+VTKAIQ
Sbjct 188 SYFGPAAIVNAHRFIFDSRDEGAAERLDILNDKDGVWRCRTTFNCTDACPRGIQVTKAIQ 247
Query 254 EVKRALMFTR 263
EVKRAL+F R
Sbjct 248 EVKRALLFAR 257
>gi|226305529|ref|YP_002765489.1| succinate dehydrogenase iron-sulfur protein [Rhodococcus erythropolis
PR4]
gi|229489568|ref|ZP_04383431.1| succinate dehydrogenase, iron-sulfur protein [Rhodococcus erythropolis
SK121]
gi|226184646|dbj|BAH32750.1| succinate dehydrogenase iron-sulfur protein [Rhodococcus erythropolis
PR4]
gi|229323665|gb|EEN89423.1| succinate dehydrogenase, iron-sulfur protein [Rhodococcus erythropolis
SK121]
Length=255
Score = 427 bits (1097), Expect = 1e-117, Method: Compositional matrix adjust.
Identities = 203/252 (81%), Positives = 229/252 (91%), Gaps = 5/252 (1%)
Query 12 PPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDG 71
P LP VP+GAVMVT+KIAR NP+ + W SF+VP LP+DRLLNLL+Y+KGYLDG
Sbjct 9 PKLPAVPEGAVMVTLKIARMNPESGEG----QHWDSFQVPALPTDRLLNLLLYVKGYLDG 64
Query 72 TLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDL 131
TLTFRRSCAHGVCGSDAMRINGVNRLACK+LM+D+LPK GK +T+TVEPI+GLPVEKDL
Sbjct 65 TLTFRRSCAHGVCGSDAMRINGVNRLACKLLMKDMLPKD-GKPVTITVEPIKGLPVEKDL 123
Query 132 VVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWH 191
VVDMEPFFDA+RA+KP+LITSGN PTRERIQS DRAR+DDTTKCILCACCTTSCPV+W
Sbjct 124 VVDMEPFFDAFRAVKPFLITSGNEPTRERIQSQHDRARFDDTTKCILCACCTTSCPVYWS 183
Query 192 EGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKA 251
+GSYFGPAAIVNAHRFIFDSRDEAA+ERLDILN+ DGVWRCRTTFNCT++CPRGI+VTKA
Sbjct 184 DGSYFGPAAIVNAHRFIFDSRDEAASERLDILNDKDGVWRCRTTFNCTDACPRGIQVTKA 243
Query 252 IQEVKRALMFTR 263
IQEVKRAL+F R
Sbjct 244 IQEVKRALLFAR 255
>gi|111023208|ref|YP_706180.1| succinate dehydrogenase iron-sulfur subunit [Rhodococcus jostii
RHA1]
gi|226365713|ref|YP_002783496.1| succinate dehydrogenase iron-sulfur subunit [Rhodococcus opacus
B4]
gi|110822738|gb|ABG98022.1| succinate dehydrogenase Fe-S protein [Rhodococcus jostii RHA1]
gi|226244203|dbj|BAH54551.1| succinate dehydrogenase iron-sulfur protein [Rhodococcus opacus
B4]
Length=259
Score = 425 bits (1092), Expect = 4e-117, Method: Compositional matrix adjust.
Identities = 200/250 (80%), Positives = 228/250 (92%), Gaps = 5/250 (2%)
Query 14 LPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTL 73
LPPVP+GAVMVT+KIAR NP+ + W SF+VP LP+DR+LNLL+Y+KGYLDGTL
Sbjct 15 LPPVPEGAVMVTLKIARMNPESGEG----QHWDSFQVPALPTDRMLNLLLYVKGYLDGTL 70
Query 74 TFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVV 133
TFRRSCAHGVCGSDAMRINGVNRLACK+LM+D+LPK GK +T+TVEPI+GLPVEKDLVV
Sbjct 71 TFRRSCAHGVCGSDAMRINGVNRLACKLLMKDMLPKD-GKPVTITVEPIKGLPVEKDLVV 129
Query 134 DMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEG 193
DMEPFFDA+RA+KP+LIT+GN PTRERIQS DRAR+DDTTKCILCACCTTSCPV+W +G
Sbjct 130 DMEPFFDAFRAVKPFLITTGNEPTRERIQSQHDRARFDDTTKCILCACCTTSCPVYWSDG 189
Query 194 SYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQ 253
SYFGPAAIVNAHRFIFDSRDE A+ERLDILN+ DGVWRCRTTFNCT++CPRGI+VTKAIQ
Sbjct 190 SYFGPAAIVNAHRFIFDSRDEGASERLDILNDKDGVWRCRTTFNCTDACPRGIQVTKAIQ 249
Query 254 EVKRALMFTR 263
EVKRAL+F R
Sbjct 250 EVKRALLFAR 259
>gi|226359482|ref|YP_002777259.1| succinate dehydrogenase iron-sulfur subunit [Rhodococcus opacus
B4]
gi|226237966|dbj|BAH48314.1| succinate dehydrogenase iron-sulfur protein [Rhodococcus opacus
B4]
Length=264
Score = 416 bits (1069), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 197/250 (79%), Positives = 219/250 (88%), Gaps = 5/250 (2%)
Query 14 LPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTL 73
LPPVP+GAVMVT+KI RF+P+DP GW SF VPCLP+DRLLNLL Y+KGYLDGTL
Sbjct 15 LPPVPEGAVMVTLKIRRFSPEDP----GKAGWASFEVPCLPTDRLLNLLTYVKGYLDGTL 70
Query 74 TFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVV 133
TFRRSCAHGVCGSDAM INGVNRLACKVLMRD+L K GK+ TVT+ P++GLPVEKDLVV
Sbjct 71 TFRRSCAHGVCGSDAMVINGVNRLACKVLMRDIL-HKDGKNTTVTIAPLKGLPVEKDLVV 129
Query 134 DMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEG 193
DMEPFF AYR IKP+L+TSG PTRERIQS DRARYDDTTKCILCACCT SCPV+W +G
Sbjct 130 DMEPFFSAYRQIKPFLMTSGQEPTRERIQSQADRARYDDTTKCILCACCTESCPVYWADG 189
Query 194 SYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQ 253
SYFGPAAIVNAHRFIFDSRDE A ER+DILN +DGVWRCRTTFNCT++CPRGI+VT+AI
Sbjct 190 SYFGPAAIVNAHRFIFDSRDEGAGERMDILNGIDGVWRCRTTFNCTDACPRGIKVTQAIT 249
Query 254 EVKRALMFTR 263
EVKR L+F R
Sbjct 250 EVKRTLLFNR 259
>gi|319949459|ref|ZP_08023519.1| succinate dehydrogenase iron-sulfur subunit [Dietzia cinnamea
P4]
gi|319436885|gb|EFV91945.1| succinate dehydrogenase iron-sulfur subunit [Dietzia cinnamea
P4]
Length=263
Score = 414 bits (1065), Expect = 5e-114, Method: Compositional matrix adjust.
Identities = 193/248 (78%), Positives = 221/248 (90%), Gaps = 5/248 (2%)
Query 16 PVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTF 75
PVP G+ MVT+KIARFNP+DPD + GW+ + VP LPSDRLLNLL+Y+K Y+DG+L F
Sbjct 21 PVPPGSTMVTLKIARFNPEDPD----SAGWKEYEVPALPSDRLLNLLMYVKNYIDGSLAF 76
Query 76 RRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDM 135
RRSCAHG+CGSDAM INGVNRLACKVLM+D+LPK GKS+T+TV P+RGLPVEKDL VDM
Sbjct 77 RRSCAHGICGSDAMLINGVNRLACKVLMKDMLPKD-GKSITITVAPLRGLPVEKDLYVDM 135
Query 136 EPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSY 195
EPFF +YR + PYLITSGN PT ERIQS TDRAR+DDTTKCILCACCTTSCPVFW +GSY
Sbjct 136 EPFFKSYRDVMPYLITSGNQPTAERIQSQTDRARFDDTTKCILCACCTTSCPVFWADGSY 195
Query 196 FGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEV 255
FGPAAIVNAHRFIFDSRDE AAERL+ILN+ +GVWRCRTTFNCT++CPRGI+VT+AIQEV
Sbjct 196 FGPAAIVNAHRFIFDSRDEGAAERLEILNDAEGVWRCRTTFNCTDACPRGIQVTQAIQEV 255
Query 256 KRALMFTR 263
KRAL+F R
Sbjct 256 KRALLFAR 263
>gi|134103016|ref|YP_001108677.1| succinate dehydrogenase iron-sulfur subunit [Saccharopolyspora
erythraea NRRL 2338]
gi|291005228|ref|ZP_06563201.1| succinate dehydrogenase iron-sulfur subunit [Saccharopolyspora
erythraea NRRL 2338]
gi|133915639|emb|CAM05752.1| succinate dehydrogenase iron-sulfur protein [Saccharopolyspora
erythraea NRRL 2338]
Length=260
Score = 410 bits (1055), Expect = 7e-113, Method: Compositional matrix adjust.
Identities = 199/259 (77%), Positives = 223/259 (87%), Gaps = 8/259 (3%)
Query 6 DVETLDPPLPPVPDGAVMVTVKIARFNPD-DPDAFAATGGWQSFRVPCLPSDRLLNLLIY 64
D L PP+P+GA MVTV+I RFNP+ D D W+S+RVP LP+DR+LNLL Y
Sbjct 9 DTTDLPEDAPPIPEGATMVTVRIQRFNPEVDEDLH-----WESYRVPALPTDRVLNLLHY 63
Query 65 IKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRG 124
IK Y+DG+LTFRRSCAHGVCGSDAMRINGVNRLACKVLM+DL K T++VEPI+G
Sbjct 64 IKWYIDGSLTFRRSCAHGVCGSDAMRINGVNRLACKVLMKDLF--AKSGETTLSVEPIKG 121
Query 125 LPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTT 184
LPVEKDL+VDMEPFF+AYRA+KPYLITSGN PTRER+QS DRAR+DDTTKCILCA CTT
Sbjct 122 LPVEKDLLVDMEPFFEAYRAVKPYLITSGNEPTRERLQSVADRARFDDTTKCILCAACTT 181
Query 185 SCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPR 244
SCPV+W EGSYFGPAAIVNAHRFIFDSRDEAA ERLDILN+VDGVWRCRTTFNCT++CPR
Sbjct 182 SCPVYWSEGSYFGPAAIVNAHRFIFDSRDEAAEERLDILNDVDGVWRCRTTFNCTDACPR 241
Query 245 GIEVTKAIQEVKRALMFTR 263
GI+VTKAIQEVKRALMF R
Sbjct 242 GIQVTKAIQEVKRALMFRR 260
>gi|256380452|ref|YP_003104112.1| succinate dehydrogenase iron-sulfur subunit [Actinosynnema mirum
DSM 43827]
gi|255924755|gb|ACU40266.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Actinosynnema mirum DSM 43827]
Length=260
Score = 403 bits (1035), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 188/249 (76%), Positives = 218/249 (88%), Gaps = 5/249 (2%)
Query 15 PPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLT 74
PPVPDGA+ VT+K+ RFNP+ F W SF +P LPSDR+LNLL Y+K Y+DGTLT
Sbjct 16 PPVPDGAITVTLKVRRFNPE----FDDEPRWDSFEIPALPSDRVLNLLHYVKWYIDGTLT 71
Query 75 FRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVD 134
FRRSCAHG+CGSDAMRINGVNRLACKVL++DL+P GK T+T+EPI+GLPV KDL+VD
Sbjct 72 FRRSCAHGICGSDAMRINGVNRLACKVLLKDLMPSG-GKPTTITIEPIKGLPVHKDLLVD 130
Query 135 MEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS 194
MEPFF+A++A+KPYL+T GN PTRERIQS DR R+DDTTKCILCACCTTSCPV+W EG+
Sbjct 131 MEPFFEAFKAVKPYLVTYGNEPTRERIQSIADRERFDDTTKCILCACCTTSCPVYWTEGT 190
Query 195 YFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQE 254
YFGPAAIVNAHRFIFDSRDE A ERLDILN++DGVWRCRTTFNCT++CPRGI+VTKAIQE
Sbjct 191 YFGPAAIVNAHRFIFDSRDEGAEERLDILNDIDGVWRCRTTFNCTDACPRGIQVTKAIQE 250
Query 255 VKRALMFTR 263
VKRAL+F R
Sbjct 251 VKRALLFKR 259
>gi|296394556|ref|YP_003659440.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Segniliparus rotundus DSM 44985]
gi|296181703|gb|ADG98609.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Segniliparus rotundus DSM 44985]
Length=267
Score = 400 bits (1027), Expect = 1e-109, Method: Compositional matrix adjust.
Identities = 188/248 (76%), Positives = 219/248 (89%), Gaps = 5/248 (2%)
Query 15 PPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLT 74
PPVP+G+VMVTV+I R NP++P A GWQ F VP LP+DR+LNLL+YIKGYLDGTLT
Sbjct 23 PPVPEGSVMVTVRIMRHNPENPSA----NGWQDFLVPALPTDRVLNLLLYIKGYLDGTLT 78
Query 75 FRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVD 134
FRRSCAHGVCGSDA+R+NGVNRLACKVLM+DL+ +K GK + +TVEPIRGLPVEKDLVVD
Sbjct 79 FRRSCAHGVCGSDAIRLNGVNRLACKVLMKDLI-RKDGKPVVLTVEPIRGLPVEKDLVVD 137
Query 135 MEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS 194
MEPFFDAYR+IKP+LI + P +ER+QS +R R+DDTTKCILCACCTTSCPVFW EG
Sbjct 138 MEPFFDAYRSIKPFLINTSPVPEKERLQSAEERHRFDDTTKCILCACCTTSCPVFWTEGK 197
Query 195 YFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQE 254
Y GPAAIVNAHRFIFDSRDEA AER++ILN+ GVWRCRTTFNCT++CPRGI+VTKAIQE
Sbjct 198 YHGPAAIVNAHRFIFDSRDEAGAERMEILNDEYGVWRCRTTFNCTDACPRGIQVTKAIQE 257
Query 255 VKRALMFT 262
VKRA++F+
Sbjct 258 VKRAVLFS 265
>gi|317508110|ref|ZP_07965794.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Segniliparus rugosus ATCC BAA-974]
gi|316253621|gb|EFV13007.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Segniliparus rugosus ATCC BAA-974]
Length=267
Score = 395 bits (1015), Expect = 3e-108, Method: Compositional matrix adjust.
Identities = 185/248 (75%), Positives = 216/248 (88%), Gaps = 5/248 (2%)
Query 15 PPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLT 74
PPVP+G+ +VTV+I R NP+DP A GWQ F VP LP+DR+LNLL+YIKGYLDGTLT
Sbjct 23 PPVPEGSTIVTVRIMRTNPEDP----AANGWQDFLVPALPTDRVLNLLLYIKGYLDGTLT 78
Query 75 FRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVD 134
FRRSCAHGVCGSDA+R+NGVNRLACKVLM+DLL +K GK + +TVEPIRGLPVEKDL+VD
Sbjct 79 FRRSCAHGVCGSDAIRLNGVNRLACKVLMKDLL-RKDGKPVVLTVEPIRGLPVEKDLIVD 137
Query 135 MEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGS 194
MEPFFDAYR++KP+LI P +ER+QS +R R+DDTTKCILCACCTTSCPVFW EG
Sbjct 138 MEPFFDAYRSVKPFLINESPAPEKERLQSAEERHRFDDTTKCILCACCTTSCPVFWTEGK 197
Query 195 YFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQE 254
Y GPAAIVNAHRFIFDSRD+A AER++ILN+ GVWRCRTTFNCT++CPRGI+VTKAIQE
Sbjct 198 YHGPAAIVNAHRFIFDSRDQAGAERMEILNDEYGVWRCRTTFNCTDACPRGIQVTKAIQE 257
Query 255 VKRALMFT 262
VKRA++F
Sbjct 258 VKRAVLFN 265
>gi|258651544|ref|YP_003200700.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Nakamurella multipartita DSM 44233]
gi|258554769|gb|ACV77711.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Nakamurella multipartita DSM 44233]
Length=265
Score = 381 bits (978), Expect = 7e-104, Method: Compositional matrix adjust.
Identities = 181/250 (73%), Positives = 212/250 (85%), Gaps = 7/250 (2%)
Query 14 LPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTL 73
LPP+P+GAVM+TVKI R+NP+ D +S+RVP P DRLLN+L YIK Y+DGTL
Sbjct 22 LPPIPEGAVMLTVKIQRYNPELDDG----PHMESYRVPAQPGDRLLNVLHYIKWYIDGTL 77
Query 74 TFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVV 133
TFRRSCAHGVCGSDAMRING NRL CKVL++DL+ K+ + VT+EPI+GLP+ KDL+V
Sbjct 78 TFRRSCAHGVCGSDAMRINGRNRLGCKVLVKDLIGDKRNE---VTIEPIKGLPLLKDLIV 134
Query 134 DMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEG 193
DMEPFFDAYRA+KP+LIT NPPTRE +QS DR R+DDTTKCILCACCTTSCPV+W E
Sbjct 135 DMEPFFDAYRAVKPFLITYDNPPTREYVQSSKDRDRFDDTTKCILCACCTTSCPVYWSED 194
Query 194 SYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQ 253
+Y GPAAIVNAHRFIFDSRD+ A ERL+IL++ +GVWRCRTTFNCTE+CPRGI+VTKAIQ
Sbjct 195 AYVGPAAIVNAHRFIFDSRDQGAQERLEILSDAEGVWRCRTTFNCTEACPRGIQVTKAIQ 254
Query 254 EVKRALMFTR 263
EVKRALMF R
Sbjct 255 EVKRALMFRR 264
>gi|257054604|ref|YP_003132436.1| succinate dehydrogenase subunit B [Saccharomonospora viridis
DSM 43017]
gi|256584476|gb|ACU95609.1| succinate dehydrogenase subunit B [Saccharomonospora viridis
DSM 43017]
Length=262
Score = 380 bits (977), Expect = 9e-104, Method: Compositional matrix adjust.
Identities = 180/250 (72%), Positives = 209/250 (84%), Gaps = 6/250 (2%)
Query 16 PVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTF 75
P P+G+V +TVKI RFNP+ W+S+ VP LP+DR+LNLL IK Y+DGTL F
Sbjct 16 PAPEGSVTITVKILRFNPETD----TEPHWESYDVPALPTDRVLNLLFNIKNYVDGTLAF 71
Query 76 RRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKK--GKSLTVTVEPIRGLPVEKDLVV 133
RRSCAHG+CGSDAM+ING+NRLACKVL++DL+ KK GK VTV PI+GLP KDL V
Sbjct 72 RRSCAHGICGSDAMQINGINRLACKVLVKDLIGKKSKDGKPPVVTVAPIKGLPTLKDLYV 131
Query 134 DMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEG 193
DMEPFF+AYRA+KPYLI GN PTRER+QSP DR R+DDTTKCILCA CT+SCPV+W +G
Sbjct 132 DMEPFFEAYRAVKPYLIAYGNEPTRERLQSPADRERFDDTTKCILCAACTSSCPVYWADG 191
Query 194 SYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQ 253
SYFGPAAIVNAHRFIFDSRDE A ERLDILN+ +GVWRCRTTFNCT++CPRGI+VTKAIQ
Sbjct 192 SYFGPAAIVNAHRFIFDSRDEGAEERLDILNDAEGVWRCRTTFNCTDACPRGIQVTKAIQ 251
Query 254 EVKRALMFTR 263
EVKRAL+F R
Sbjct 252 EVKRALLFRR 261
>gi|300782780|ref|YP_003763071.1| succinate dehydrogenase iron-sulfur protein [Amycolatopsis mediterranei
U32]
gi|299792294|gb|ADJ42669.1| succinate dehydrogenase iron-sulfur protein [Amycolatopsis mediterranei
U32]
gi|340524154|gb|AEK39359.1| succinate dehydrogenase iron-sulfur protein [Amycolatopsis mediterranei
S699]
Length=256
Score = 375 bits (964), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 179/255 (71%), Positives = 208/255 (82%), Gaps = 5/255 (1%)
Query 9 TLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGY 68
T D P + VT+KI RFNP+ + W+S+ VP +DRLLNLL Y+K Y
Sbjct 6 TEDAPAASDEHTPITVTLKILRFNPE----VDSEPHWESYDVPAQRTDRLLNLLFYVKDY 61
Query 69 LDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVE 128
+DGT +FRRSCAHGVCGSDAM+ING+NRLACKVLM+DLL K GK T+T+ PI+GL
Sbjct 62 IDGTFSFRRSCAHGVCGSDAMQINGINRLACKVLMKDLLAKD-GKQTTITIAPIKGLTTL 120
Query 129 KDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPV 188
KDL VDM+PFF+AYRAIKPYLIT GN PTRERIQS DR R+DDTTKCILCACCT+SCPV
Sbjct 121 KDLYVDMDPFFEAYRAIKPYLITYGNEPTRERIQSQADRDRFDDTTKCILCACCTSSCPV 180
Query 189 FWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEV 248
+W++GSYFGPAAIVNAHRFIFDSRDE A ERLDILN+ +GVWRCRTTFNCT++CPRGI+V
Sbjct 181 YWNDGSYFGPAAIVNAHRFIFDSRDEGAEERLDILNDGEGVWRCRTTFNCTDACPRGIQV 240
Query 249 TKAIQEVKRALMFTR 263
TKAIQEVKRAL+F R
Sbjct 241 TKAIQEVKRALLFKR 255
>gi|302524157|ref|ZP_07276499.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp.
AA4]
gi|302433052|gb|EFL04868.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp.
AA4]
Length=257
Score = 374 bits (960), Expect = 9e-102, Method: Compositional matrix adjust.
Identities = 174/242 (72%), Positives = 206/242 (86%), Gaps = 5/242 (2%)
Query 22 VMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRSCAH 81
+ VT+KI RFNP+ + W+S+ VP P+DR+LNLL Y+K Y+DGT +FRRSCAH
Sbjct 20 IQVTLKILRFNPE----VDSEPHWESYDVPAQPTDRVLNLLFYVKDYIDGTFSFRRSCAH 75
Query 82 GVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDA 141
GVCGSDAM+ING+NRLACKVL++DLL +K GK +T+ PI+GL KDL VDM+PFF+A
Sbjct 76 GVCGSDAMQINGINRLACKVLLKDLL-EKNGKKTEITIAPIKGLTTLKDLYVDMDPFFEA 134
Query 142 YRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGPAAI 201
YRAIKPYLIT GN PTRERIQS DR R+DDTTKCILCACCT+SCPV+W++GSYFGPAAI
Sbjct 135 YRAIKPYLITYGNEPTRERIQSQADRNRFDDTTKCILCACCTSSCPVYWNDGSYFGPAAI 194
Query 202 VNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALMF 261
VNAHRFIFDSRDE A ERLDILN+ +GVWRCRTTFNCT++CPRGI+VTKAIQEVKRAL+F
Sbjct 195 VNAHRFIFDSRDEGAEERLDILNDGEGVWRCRTTFNCTDACPRGIQVTKAIQEVKRALLF 254
Query 262 TR 263
R
Sbjct 255 KR 256
>gi|167968955|ref|ZP_02551232.1| succinate dehydrogenase iron-sulfur subunit [Mycobacterium tuberculosis
H37Ra]
Length=181
Score = 373 bits (958), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 180/181 (99%), Positives = 181/181 (100%), Gaps = 0/181 (0%)
Query 83 VCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDAY 142
+CGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDAY
Sbjct 1 MCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDAY 60
Query 143 RAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGPAAIV 202
RAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGPAAIV
Sbjct 61 RAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGPAAIV 120
Query 203 NAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALMFT 262
NAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALMFT
Sbjct 121 NAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALMFT 180
Query 263 R 263
R
Sbjct 181 R 181
>gi|111220648|ref|YP_711442.1| succinate dehydrogenase iron-sulfur subunit [Frankia alni ACN14a]
gi|111148180|emb|CAJ59849.1| succinate dehydrogenase, Fe-S protein [Frankia alni ACN14a]
Length=253
Score = 358 bits (918), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 170/242 (71%), Positives = 204/242 (85%), Gaps = 11/242 (4%)
Query 22 VMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRSCAH 81
V VT+KI RF+P+ FA W+S++VP PSDRLL+ ++++K LDG+L FRRSCAH
Sbjct 22 VTVTLKIRRFDPE----FADEARWESYQVPFDPSDRLLDAIMWVKWNLDGSLAFRRSCAH 77
Query 82 GVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDA 141
GVCGSDAMR+NGVNRLACKVL++DL P+ +++EPI+GLPVEKDL+VDMEPFFDA
Sbjct 78 GVCGSDAMRVNGVNRLACKVLVKDLGPE-------ISIEPIKGLPVEKDLIVDMEPFFDA 130
Query 142 YRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGPAAI 201
+RA+KPYLIT + PTRER+QSP DRAR+DDTTKCI+CA CTTSCPVFW++G YFGP AI
Sbjct 131 FRAVKPYLITDDHEPTRERLQSPEDRARFDDTTKCIMCAACTTSCPVFWNDGDYFGPQAI 190
Query 202 VNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALMF 261
V AHRFIFDSRD A ERL+ILNE +GVWRCRTTFNCT +CPRGI+VTKAIQEVKRAL+F
Sbjct 191 VAAHRFIFDSRDAGADERLEILNEREGVWRCRTTFNCTNACPRGIQVTKAIQEVKRALLF 250
Query 262 TR 263
R
Sbjct 251 RR 252
>gi|336177045|ref|YP_004582420.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Frankia symbiont of Datisca glomerata]
gi|334858025|gb|AEH08499.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Frankia symbiont of Datisca glomerata]
Length=254
Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/265 (66%), Positives = 210/265 (80%), Gaps = 14/265 (5%)
Query 1 MSVEPDVETLDPP--LPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRL 58
M+V D+ T P P DG +T+KI R+NP++ D WQSF VP +PSDRL
Sbjct 1 MTVTDDLSTTVPAGASPSTSDGRT-ITLKIRRYNPEESD----KAYWQSFAVPFVPSDRL 55
Query 59 LNLLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVT 118
L+ L Y+K LDG+L+FRRSCAHGVCGSDAMRING NRLACKVL++DL + ++
Sbjct 56 LDALHYVKWNLDGSLSFRRSCAHGVCGSDAMRINGANRLACKVLVKDLGSE-------IS 108
Query 119 VEPIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCIL 178
+EPI+GLPVEKDL+V+MEPFFDA+RA+KPYLI G+ PT+ER+QS DR R+DDTTKCIL
Sbjct 109 IEPIKGLPVEKDLIVNMEPFFDAFRAVKPYLIPEGHEPTKERLQSAADRERFDDTTKCIL 168
Query 179 CACCTTSCPVFWHEGSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNC 238
CA CTTSCPVFW++G YFGPAAIV AHRFIFDSRD A+ ERL+ILNE +GVWRCRTTFNC
Sbjct 169 CAACTTSCPVFWNDGDYFGPAAIVAAHRFIFDSRDAASDERLEILNEREGVWRCRTTFNC 228
Query 239 TESCPRGIEVTKAIQEVKRALMFTR 263
+ +CPRGI+VTKAI EVKRAL+F R
Sbjct 229 SNACPRGIQVTKAIAEVKRALIFRR 253
>gi|86739391|ref|YP_479791.1| succinate dehydrogenase iron-sulfur subunit [Frankia sp. CcI3]
gi|86566253|gb|ABD10062.1| succinate dehydrogenase subunit B [Frankia sp. CcI3]
Length=232
Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/242 (68%), Positives = 199/242 (83%), Gaps = 11/242 (4%)
Query 22 VMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRSCAH 81
+ VT+KI R++P+ D W+S++VP PSDRLL+ ++++K LDGTL FRRSCAH
Sbjct 1 MTVTLKIRRYDPETVDE----AHWESYQVPFDPSDRLLDAIMWVKWNLDGTLAFRRSCAH 56
Query 82 GVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDA 141
GVCGSDAMR+NG NRLACKVL++DL + +T+EPI+GLPVEKDL+VDMEPFFDA
Sbjct 57 GVCGSDAMRVNGANRLACKVLVKDLGSE-------ITIEPIKGLPVEKDLIVDMEPFFDA 109
Query 142 YRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGPAAI 201
+RA+KPYLIT + PTRER+QS DRAR+DDTTKCI+CA CTT+CPVFW +G YFGP AI
Sbjct 110 FRAVKPYLITDDHEPTRERLQSTEDRARFDDTTKCIMCAACTTACPVFWTDGDYFGPQAI 169
Query 202 VNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALMF 261
V AHRFIFDSRD ERL+ILNE +GVWRCRTTFNCT++CPRGI+VTKAIQEVKRAL+F
Sbjct 170 VAAHRFIFDSRDSGTDERLEILNEREGVWRCRTTFNCTDACPRGIQVTKAIQEVKRALLF 229
Query 262 TR 263
R
Sbjct 230 RR 231
>gi|295838570|ref|ZP_06825503.1| succinate dehydrogenase, iron-sulfur subunit [Streptomyces sp.
SPB74]
gi|302519504|ref|ZP_07271846.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp.
SPB78]
gi|318061836|ref|ZP_07980557.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp.
SA3_actG]
gi|318076430|ref|ZP_07983762.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp.
SA3_actF]
gi|333026666|ref|ZP_08454730.1| putative succinate dehydrogenase iron-sulfur subunit [Streptomyces
sp. Tu6071]
gi|197697804|gb|EDY44737.1| succinate dehydrogenase, iron-sulfur subunit [Streptomyces sp.
SPB74]
gi|302428399|gb|EFL00215.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp.
SPB78]
gi|332746518|gb|EGJ76959.1| putative succinate dehydrogenase iron-sulfur subunit [Streptomyces
sp. Tu6071]
Length=253
Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 166/245 (68%), Positives = 198/245 (81%), Gaps = 9/245 (3%)
Query 19 DGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRS 78
D + VTV++ RFNP+ +A WQ F++P P +R+L+ L IK DGTLTFRRS
Sbjct 17 DHLITVTVRVRRFNPE----VSADVVWQDFQLPMDPKERVLDALHKIKWEQDGTLTFRRS 72
Query 79 CAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPF 138
CAHG+CGSDAMRING NRLACK L++DL P K +TVEPI+GL V KDLVVDM+PF
Sbjct 73 CAHGICGSDAMRINGKNRLACKTLIKDLNPAKP-----ITVEPIKGLTVLKDLVVDMDPF 127
Query 139 FDAYRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGP 198
F AYR + P+L+T+GN PTRER+QS DR R+DDTTKCILCA CT+SCPVFW++G YFGP
Sbjct 128 FQAYRDVMPFLVTTGNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVFWNDGQYFGP 187
Query 199 AAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRA 258
AAIVNAHRFIFDSRDEA ++RL+ILN+ DGVWRCRTTFNCT++CPRGIEVTKAIQEVKRA
Sbjct 188 AAIVNAHRFIFDSRDEAGSQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRA 247
Query 259 LMFTR 263
L+ R
Sbjct 248 LITRR 252
>gi|334336484|ref|YP_004541636.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Isoptericola variabilis 225]
gi|334106852|gb|AEG43742.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Isoptericola variabilis 225]
Length=257
Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 165/237 (70%), Positives = 194/237 (82%), Gaps = 7/237 (2%)
Query 24 VTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRSCAHGV 83
VT+++ R+NP+ A WQ F V +DR+L+ L IK LDG+LTFRRSCAHG+
Sbjct 24 VTLRVRRYNPESAHGDEAV--WQDFTVTAHGTDRVLDALHKIKWELDGSLTFRRSCAHGI 81
Query 84 CGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDAYR 143
CGSDAMRING NRLACK L++D+ P K +TVEPI+GLPV KDLVVDMEPFF +YR
Sbjct 82 CGSDAMRINGRNRLACKTLLKDVNPDKP-----ITVEPIKGLPVVKDLVVDMEPFFASYR 136
Query 144 AIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGPAAIVN 203
I P+LIT+GN P+RERIQSP DRAR+DDTTKCILCA CT+SCPVFW +G YFGPAAIVN
Sbjct 137 EIMPFLITTGNEPSRERIQSPEDRARFDDTTKCILCAACTSSCPVFWTDGQYFGPAAIVN 196
Query 204 AHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALM 260
AHRFIFDSRDE A +RL+ILN+ +GVWRCRTTFNCTE+CPRGIEVTKAIQEVKRA++
Sbjct 197 AHRFIFDSRDEGATQRLEILNDKEGVWRCRTTFNCTEACPRGIEVTKAIQEVKRAMI 253
>gi|337767745|emb|CCB76456.1| Succinate dehydrogenase iron-sulfur subunit [Streptomyces cattleya
NRRL 8057]
Length=258
Score = 344 bits (882), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 164/242 (68%), Positives = 196/242 (81%), Gaps = 9/242 (3%)
Query 22 VMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRSCAH 81
+ VT+++ RFNP+ +A W +++ P +R+L+ L IK LDGTLTFRRSCAH
Sbjct 25 ITVTMRVRRFNPE----VSAEATWVDYQLEMDPKERVLDALHKIKWELDGTLTFRRSCAH 80
Query 82 GVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDA 141
G+CGSDAMRING NRLACK L++D+ P+K +TVEPI+GL V KDLVVDMEPFF A
Sbjct 81 GICGSDAMRINGRNRLACKTLLKDINPEKP-----ITVEPIKGLTVLKDLVVDMEPFFQA 135
Query 142 YRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGPAAI 201
YR + P+LIT GN PTRER+QS +R R+DDTTKCILCA CTTSCPVFW++G YFGPAAI
Sbjct 136 YRDVMPFLITKGNEPTRERLQSAEERERFDDTTKCILCAACTTSCPVFWNDGQYFGPAAI 195
Query 202 VNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALMF 261
VNAHRFIFDSRDEAA +RL+ILN+ DGVWRCRTTFNCT++CPRGIEVTKAIQEVKRAL+
Sbjct 196 VNAHRFIFDSRDEAAEQRLEILNDRDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALIT 255
Query 262 TR 263
R
Sbjct 256 RR 257
>gi|302536395|ref|ZP_07288737.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp.
C]
gi|302445290|gb|EFL17106.1| succinate dehydrogenase iron-sulfur subunit [Streptomyces sp.
C]
Length=252
Score = 340 bits (873), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 163/242 (68%), Positives = 194/242 (81%), Gaps = 9/242 (3%)
Query 22 VMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRSCAH 81
+ VT +I R+NP+ +A WQ F++ P +R+L+ L IK LDGTLTFRRSCAH
Sbjct 19 ITVTFRIRRYNPE----VSAEAEWQDFQIEIDPKERVLDGLHKIKWDLDGTLTFRRSCAH 74
Query 82 GVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDA 141
G+CGSDAMRING NRLACK L++D+ P+K +TVE I+GL V KDLVVDMEPFF A
Sbjct 75 GICGSDAMRINGKNRLACKTLIKDINPEKP-----ITVEAIKGLTVMKDLVVDMEPFFQA 129
Query 142 YRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGPAAI 201
YR + P+L+T GN PTRER+QS DR R+DDTTKCILCA CT+SCPVFW++G YFGPAAI
Sbjct 130 YRDVMPFLVTKGNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVFWNDGQYFGPAAI 189
Query 202 VNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALMF 261
VNAHRFIFDSRDEA +RL+ILN+ DGVWRCRTTFNCT++CPRGIEVTKAIQEVKRAL+
Sbjct 190 VNAHRFIFDSRDEAGEQRLEILNDKDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALIT 249
Query 262 TR 263
R
Sbjct 250 RR 251
>gi|328884578|emb|CCA57817.1| Succinate dehydrogenase iron-sulfur protein [Streptomyces venezuelae
ATCC 10712]
Length=252
Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 163/242 (68%), Positives = 195/242 (81%), Gaps = 9/242 (3%)
Query 22 VMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRSCAH 81
+ VT++I RFNP+ DA W+ F++ P +R+L+ L IK +DGTLTFRRSCAH
Sbjct 19 ITVTMRIRRFNPEVSDA----SVWEDFQIEIDPKERVLDALHKIKWDVDGTLTFRRSCAH 74
Query 82 GVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDA 141
G+CGSDAMRING NRLACK L++D+ P+K +TVE I+GL V KDLVVDMEPFF A
Sbjct 75 GICGSDAMRINGKNRLACKTLIKDINPEKP-----ITVEAIKGLTVLKDLVVDMEPFFQA 129
Query 142 YRAIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGPAAI 201
YR + P+L+T GN PTRER+QS DR R+DDTTKCILCA CT+SCPVFW++G YFGPAAI
Sbjct 130 YRDVMPFLVTKGNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVFWNDGQYFGPAAI 189
Query 202 VNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALMF 261
VNAHRFIFDSRDEA +RL+ILN+ DGVWRCRTTFNCT++CPRGIEVTKAIQEVKRAL+
Sbjct 190 VNAHRFIFDSRDEAGEQRLEILNDKDGVWRCRTTFNCTDACPRGIEVTKAIQEVKRALIT 249
Query 262 TR 263
R
Sbjct 250 RR 251
>gi|269955787|ref|YP_003325576.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Xylanimonas cellulosilytica DSM 15894]
gi|269304468|gb|ACZ30018.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Xylanimonas cellulosilytica DSM 15894]
Length=250
Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 160/237 (68%), Positives = 191/237 (81%), Gaps = 9/237 (3%)
Query 24 VTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRSCAHGV 83
VT+KI RFNP+ + W+ F+V +DR+L+ L IK DG+LTFRRSCAHG+
Sbjct 19 VTIKIRRFNPE----VSTEATWEEFQVEAHATDRILDALHKIKWEQDGSLTFRRSCAHGI 74
Query 84 CGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDAYR 143
CGSDAMRING NRLACK L++D+ P K +TVEPI+GLPV KDLVVDMEPFF +YR
Sbjct 75 CGSDAMRINGRNRLACKTLLKDVNPDKP-----ITVEPIKGLPVVKDLVVDMEPFFASYR 129
Query 144 AIKPYLITSGNPPTRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEGSYFGPAAIVN 203
+ P+LITSGN PTRER+QS D A++DDTTKCILCA CT+SCPVFW +G YFGPAAIVN
Sbjct 130 EVMPFLITSGNEPTRERLQSAADHAKFDDTTKCILCAACTSSCPVFWTDGQYFGPAAIVN 189
Query 204 AHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALM 260
AHRFIFDSRDE +RLDILN+ +GVWRCRTTFNCTE+CPRGI+VTKAIQEVK+A++
Sbjct 190 AHRFIFDSRDEGGQQRLDILNDKEGVWRCRTTFNCTEACPRGIQVTKAIQEVKQAMI 246
Lambda K H
0.324 0.140 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 394810015572
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40