BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3321c
Length=80
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610457|ref|NP_217838.1| hypothetical protein Rv3321c [Mycob... 161 3e-38
gi|206601847|gb|EDZ38330.1| Hypothetical protein CGL2_11278039 [... 75.5 2e-12
gi|56478773|ref|YP_160362.1| hypothetical protein ebA5867 [Aroma... 72.8 2e-11
gi|114331351|ref|YP_747573.1| hypothetical protein Neut_1360 [Ni... 71.6 4e-11
gi|113954589|ref|YP_729373.1| hypothetical protein sync_0136 [Sy... 62.4 2e-08
gi|317967918|ref|ZP_07969308.1| hypothetical protein SCB02_00122... 56.6 1e-06
gi|196230684|ref|ZP_03129545.1| conserved hypothetical protein [... 56.6 1e-06
gi|87123103|ref|ZP_01078954.1| hypothetical protein RS9917_04570... 55.5 2e-06
gi|337267946|ref|YP_004612001.1| hypothetical protein Mesop_3461... 55.5 3e-06
gi|121595341|ref|YP_987237.1| hypothetical protein Ajs_3027 [Aci... 55.5 3e-06
gi|344199816|ref|YP_004784142.1| hypothetical protein Acife_1683... 52.4 2e-05
gi|87123275|ref|ZP_01079126.1| hypothetical protein RS9917_05430... 52.4 2e-05
gi|336038110|gb|AEH84040.1| hypothetical protein SM11_pD1208 [Si... 51.6 3e-05
gi|294339104|emb|CAZ87458.1| putative transcriptional regulator ... 51.6 4e-05
gi|16264147|ref|NP_436939.1| hypothetical protein SM_b20413 [Sin... 50.8 6e-05
gi|218458497|ref|ZP_03498588.1| hypothetical protein RetlK5_0316... 48.1 4e-04
gi|241518560|ref|YP_002979188.1| hypothetical protein Rleg_5863 ... 47.0 9e-04
gi|304413693|ref|ZP_07395137.1| hypothetical protein REG_0768 [C... 47.0 0.001
gi|289575235|ref|ZP_06455462.1| antitoxin [Mycobacterium tubercu... 45.1 0.003
gi|306778586|ref|ZP_07416923.1| antitoxin [Mycobacterium tubercu... 44.3 0.006
gi|15843316|ref|NP_338353.1| CopG family DNA-binding protein [My... 44.3 0.006
gi|340358884|ref|ZP_08681387.1| hypothetical protein HMPREF9062_... 43.5 0.009
gi|15842065|ref|NP_337102.1| hypothetical protein MT2606 [Mycoba... 43.1 0.015
gi|134291478|ref|YP_001115247.1| hypothetical protein Bcep1808_6... 42.7 0.020
gi|289448138|ref|ZP_06437882.1| antitoxin [Mycobacterium tubercu... 42.0 0.033
gi|15609630|ref|NP_217009.1| hypothetical protein Rv2493 [Mycoba... 42.0 0.033
gi|340627507|ref|YP_004745959.1| hypothetical protein MCAN_25321... 42.0 0.034
gi|256826276|ref|YP_003150236.1| hypothetical protein Ksed_25070... 40.4 0.097
gi|325069051|ref|ZP_08127724.1| hypothetical protein AoriK_14579... 40.0 0.10
gi|15610008|ref|NP_217387.1| hypothetical protein Rv2871 [Mycoba... 40.0 0.13
gi|254551940|ref|ZP_05142387.1| antitoxin [Mycobacterium tubercu... 39.7 0.13
gi|334319153|ref|YP_004551712.1| hypothetical protein Sinme_6079... 39.3 0.18
gi|336035908|gb|AEH81839.1| hypothetical protein SM11_pC0766 [Si... 38.9 0.23
gi|254364141|ref|ZP_04980187.1| conserved hypothetical protein [... 38.1 0.39
gi|15840686|ref|NP_335723.1| hypothetical protein MT1279 [Mycoba... 38.1 0.39
gi|15608381|ref|NP_215757.1| hypothetical protein Rv1241 [Mycoba... 38.1 0.41
gi|240168913|ref|ZP_04747572.1| hypothetical protein MkanA1_0635... 37.7 0.50
gi|294054234|ref|YP_003547892.1| hypothetical protein Caka_0698 ... 37.4 0.71
gi|157382509|gb|ABV48745.1| Rv2871 [Mycobacterium kansasii ATCC ... 36.2 1.8
gi|33864608|ref|NP_896167.1| hypothetical protein SYNW0072 [Syne... 35.8 2.3
gi|330818819|ref|YP_004351036.1| hypothetical protein bgla_3p011... 35.8 2.3
gi|88810688|ref|ZP_01125945.1| hypothetical protein NB231_16448 ... 35.8 2.4
gi|258593475|emb|CBE69814.1| conserved protein of unknown functi... 34.3 6.4
gi|240171735|ref|ZP_04750394.1| hypothetical protein MkanA1_2064... 34.3 7.0
gi|15842141|ref|NP_337178.1| hypothetical protein MT2676 [Mycoba... 33.9 8.0
gi|332321844|sp|P0CW33.1|VPB25_MYCTU RecName: Full=Antitoxin VapB25 33.5 9.7
gi|121636191|ref|YP_976414.1| antitoxin [Mycobacterium bovis BCG... 33.5 9.7
>gi|15610457|ref|NP_217838.1| hypothetical protein Rv3321c [Mycobacterium tuberculosis H37Rv]
gi|15842913|ref|NP_337950.1| CopG family DNA-binding protein [Mycobacterium tuberculosis CDC1551]
gi|31794502|ref|NP_856995.1| hypothetical protein Mb3350c [Mycobacterium bovis AF2122/97]
77 more sequence titles
Length=80
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP
Sbjct 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
Query 61 HRGGAVSNALIDRLRDEEAV 80
HRGGAVSNALIDRLRDEEAV
Sbjct 61 HRGGAVSNALIDRLRDEEAV 80
>gi|206601847|gb|EDZ38330.1| Hypothetical protein CGL2_11278039 [Leptospirillum sp. Group
II '5-way CG']
Length=152
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/78 (47%), Positives = 53/78 (68%), Gaps = 0/78 (0%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL ID+DVL +E ARR+ ++ G+++SDL RQAL + + +S+ + GF P P
Sbjct 73 MRTTLDIDEDVLETARELARRQGKSIGKVISDLGRQALMEMSGRDLSSETVSVFGFRPFP 132
Query 61 HRGGAVSNALIDRLRDEE 78
RGG V+N ID LR+++
Sbjct 133 KRGGVVTNDRIDALREDD 150
>gi|56478773|ref|YP_160362.1| hypothetical protein ebA5867 [Aromatoleum aromaticum EbN1]
gi|56314816|emb|CAI09461.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length=81
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/81 (49%), Positives = 49/81 (61%), Gaps = 1/81 (1%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTN-QNPQPAASQEDAFHGFEPL 59
MRTTL I+ DVL A KE AR++ + G+++S L R+ L PQ Q A GFEP
Sbjct 1 MRTTLDIESDVLAAAKEIARQQHTSVGKVISQLVRRTLIGAAAPQTVVRQTPAVPGFEPF 60
Query 60 PHRGGAVSNALIDRLRDEEAV 80
P R V+N LIDRLRD E +
Sbjct 61 PARDVIVTNELIDRLRDAEGI 81
>gi|114331351|ref|YP_747573.1| hypothetical protein Neut_1360 [Nitrosomonas eutropha C91]
gi|114308365|gb|ABI59608.1| conserved hypothetical protein [Nitrosomonas eutropha C91]
Length=92
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/82 (49%), Positives = 53/82 (65%), Gaps = 3/82 (3%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDA--FHGFEP 58
+RTT+ I++DVL A KE AR E + G+++S L RQAL + +S +DA GF P
Sbjct 12 VRTTIDIENDVLAAAKEIARTENVSVGKVISRLVRQALAGHVAE-VSSPDDASSVTGFRP 70
Query 59 LPHRGGAVSNALIDRLRDEEAV 80
P RG VSN LI+RLRDEE +
Sbjct 71 FPSRGVIVSNELINRLRDEEGI 92
>gi|113954589|ref|YP_729373.1| hypothetical protein sync_0136 [Synechococcus sp. CC9311]
gi|113881940|gb|ABI46898.1| conserved hypothetical protein [Synechococcus sp. CC9311]
Length=81
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/83 (47%), Positives = 53/83 (64%), Gaps = 6/83 (7%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQE--DAFHGFEP 58
MRTTL +DDDVL A + AR+ +R+ G+++SDLARQ L+ P SQ + G
Sbjct 1 MRTTLRLDDDVLAAARVLARQRRRSVGDVISDLARQTLS--RPADGGSQNVLEQRSGLPQ 58
Query 59 LPHR--GGAVSNALIDRLRDEEA 79
LP + GGAV L+++LRDEEA
Sbjct 59 LPVKASGGAVDLELVNQLRDEEA 81
>gi|317967918|ref|ZP_07969308.1| hypothetical protein SCB02_00122 [Synechococcus sp. CB0205]
Length=86
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/82 (44%), Positives = 50/82 (61%), Gaps = 8/82 (9%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTN---QNPQPAASQEDAFHGFE 57
MRTTLS+DDDVL A K AR+ K+ G ++S+LARQ L QNP+PA + +G
Sbjct 8 MRTTLSLDDDVLAAAKVLARQRKQPIGSVISELARQGLAQANRQNPEPAQIKR---NGLM 64
Query 58 PLPHR--GGAVSNALIDRLRDE 77
+P R G V L++ LR++
Sbjct 65 LIPRRLDGSPVDLELVNNLRED 86
>gi|196230684|ref|ZP_03129545.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
gi|196225025|gb|EDY19534.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
Length=80
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (44%), Positives = 43/74 (59%), Gaps = 1/74 (1%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL ID DVL A KE + R KR+ G ++SDLAR AL + A +GFE +
Sbjct 1 MRTTLDIDSDVLAAAKEISARTKRSVGHVISDLARAALLKRGKSKARISR-MINGFEVIS 59
Query 61 HRGGAVSNALIDRL 74
G V++ L+ +L
Sbjct 60 ADGRVVTSELVRKL 73
>gi|87123103|ref|ZP_01078954.1| hypothetical protein RS9917_04570 [Synechococcus sp. RS9917]
gi|86168823|gb|EAQ70079.1| hypothetical protein RS9917_04570 [Synechococcus sp. RS9917]
Length=79
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (43%), Positives = 46/78 (59%), Gaps = 0/78 (0%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL +DDDVL A + AR++ + GE++S+LARQAL E + P+
Sbjct 1 MRTTLQLDDDVLDAARVLARQQHLSVGEVISELARQALRRPAGLEEPPSERSGLPLLPIK 60
Query 61 HRGGAVSNALIDRLRDEE 78
GG V L+++LRDEE
Sbjct 61 SSGGVVDLNLVNQLRDEE 78
>gi|337267946|ref|YP_004612001.1| hypothetical protein Mesop_3461 [Mesorhizobium opportunistum
WSM2075]
gi|336028256|gb|AEH87907.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075]
Length=87
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/76 (47%), Positives = 47/76 (62%), Gaps = 3/76 (3%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL+IDDDVLLA K AR++ R+ GE++SDLARQ+L + PQ A + + P
Sbjct 1 MRTTLAIDDDVLLAAKAMARQQDRSIGEVISDLARQSL--RRPQ-AGGERNGIPLLSARP 57
Query 61 HRGGAVSNALIDRLRD 76
V +I+ LRD
Sbjct 58 DDPPLVDLEMINALRD 73
>gi|121595341|ref|YP_987237.1| hypothetical protein Ajs_3027 [Acidovorax sp. JS42]
gi|120607421|gb|ABM43161.1| conserved hypothetical protein [Acidovorax sp. JS42]
Length=71
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/71 (47%), Positives = 42/71 (60%), Gaps = 3/71 (4%)
Query 13 LAVKERARREKRTAGEILSDLARQALTNQNPQPAASQ---EDAFHGFEPLPHRGGAVSNA 69
+A KE AR+E + G+++S L R ALT Q Q AA+ + GF P RG VSN
Sbjct 1 MAAKELARQENVSLGKVVSRLLRMALTGQVGQIAAAAPVGTASATGFVPFAPRGVVVSNE 60
Query 70 LIDRLRDEEAV 80
LID+LRD E V
Sbjct 61 LIDKLRDSEGV 71
>gi|344199816|ref|YP_004784142.1| hypothetical protein Acife_1683 [Acidithiobacillus ferrivorans
SS3]
gi|343775260|gb|AEM47816.1| hypothetical protein Acife_1683 [Acidithiobacillus ferrivorans
SS3]
Length=77
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/79 (45%), Positives = 47/79 (60%), Gaps = 6/79 (7%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL+IDDDVL A K A R+ ++ G ++S L RQAL QN S + +G LP
Sbjct 1 MRTTLAIDDDVLAAAKGLADRQHKSVGAVVSALLRQALQPQN----TSGGHSRNGIPLLP 56
Query 61 HRGGAVSNAL--IDRLRDE 77
R A+ L +++LRDE
Sbjct 57 VRPDALPATLEIVNQLRDE 75
>gi|87123275|ref|ZP_01079126.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
gi|86168995|gb|EAQ70251.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
Length=82
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/81 (44%), Positives = 52/81 (65%), Gaps = 8/81 (9%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALT--NQNPQPAASQEDAFHGFEP 58
MRTTL IDDD+L A K+ A++++ +AG+++S L RQALT + +P AA++ GF P
Sbjct 1 MRTTLDIDDDLLQAAKDLAKQQRMSAGQVVSTLLRQALTQAHHSPSEAAARPHPC-GFRP 59
Query 59 L---PHRGGAVSNALIDRLRD 76
P R +NA ++ LRD
Sbjct 60 FAGDPSR--ITNNADVEALRD 78
>gi|336038110|gb|AEH84040.1| hypothetical protein SM11_pD1208 [Sinorhizobium meliloti SM11]
Length=75
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/79 (40%), Positives = 51/79 (65%), Gaps = 4/79 (5%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL+IDDDVL+A K A +++R+ GE++S+LAR++L + P+ + + + P P
Sbjct 1 MRTTLAIDDDVLIAAKAMATQQQRSVGEVISELARRSL--RRPR-SGGERNGIPLLSPRP 57
Query 61 HRGGAVSNALIDRLRDEEA 79
V+ +++ LRDE A
Sbjct 58 D-APPVTLEIVNALRDERA 75
>gi|294339104|emb|CAZ87458.1| putative transcriptional regulator [Thiomonas sp. 3As]
Length=75
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/77 (43%), Positives = 47/77 (62%), Gaps = 4/77 (5%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTT+SIDDDVL A + A R+ ++ GE+LS LARQAL +PA ++ + P
Sbjct 1 MRTTVSIDDDVLNAARHLAARQHKSVGEVLSALARQALRR---EPALAERNGVPLLASQP 57
Query 61 HRGGAVSNALIDRLRDE 77
V+ L+++LRDE
Sbjct 58 D-AKPVTLELVNQLRDE 73
>gi|16264147|ref|NP_436939.1| hypothetical protein SM_b20413 [Sinorhizobium meliloti 1021]
gi|334319719|ref|YP_004556348.1| hypothetical protein Sinme_3766 [Sinorhizobium meliloti AK83]
gi|15140272|emb|CAC48799.1| HYPOTHETICAL PROTEIN SM_b20413 [Sinorhizobium meliloti 1021]
gi|333815878|gb|AEG08545.1| hypothetical protein SinmeB_4262 [Sinorhizobium meliloti BL225C]
gi|334097458|gb|AEG55468.1| hypothetical protein Sinme_3766 [Sinorhizobium meliloti AK83]
Length=75
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/79 (40%), Positives = 51/79 (65%), Gaps = 4/79 (5%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL+IDDDVL+A K A +++R+ GE++S+LAR++L + P+ + + + P P
Sbjct 1 MRTTLAIDDDVLIAAKAMATQQQRSVGEVISELARRSL--RRPR-SGGERNGIPLLSPRP 57
Query 61 HRGGAVSNALIDRLRDEEA 79
V+ +++ LRDE A
Sbjct 58 D-APPVTLEIVNALRDELA 75
>gi|218458497|ref|ZP_03498588.1| hypothetical protein RetlK5_03168 [Rhizobium etli Kim 5]
Length=63
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/38 (58%), Positives = 32/38 (85%), Gaps = 0/38 (0%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL 38
MRTTL+IDDDVL+A K A ++ R+ GE++S+LAR++L
Sbjct 7 MRTTLAIDDDVLIAAKAMATQQHRSVGEVISELARRSL 44
>gi|241518560|ref|YP_002979188.1| hypothetical protein Rleg_5863 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240862973|gb|ACS60637.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length=75
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/38 (58%), Positives = 31/38 (82%), Gaps = 0/38 (0%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL 38
MRTTL+IDDDVL A K A ++ R+ GE++S+LAR++L
Sbjct 1 MRTTLAIDDDVLTAAKAMATQQHRSVGEVISELARRSL 38
>gi|304413693|ref|ZP_07395137.1| hypothetical protein REG_0768 [Candidatus Regiella insecticola
LSR1]
gi|304283784|gb|EFL92178.1| hypothetical protein REG_0768 [Candidatus Regiella insecticola
LSR1]
Length=82
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/79 (42%), Positives = 47/79 (60%), Gaps = 9/79 (11%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL+IDDD+L A K A R+ ++ G ++S LARQAL P+ + + G L
Sbjct 9 MRTTLAIDDDILAAAKGLAARQNKSLGAVISSLARQALH----VPSHPKRN---GIPLLL 61
Query 61 HR--GGAVSNALIDRLRDE 77
R G V+ L+++LRDE
Sbjct 62 VRSDGMLVTPELVNQLRDE 80
>gi|289575235|ref|ZP_06455462.1| antitoxin [Mycobacterium tuberculosis K85]
gi|339632557|ref|YP_004724199.1| hypothetical protein MAF_25460 [Mycobacterium africanum GM041182]
gi|289539666|gb|EFD44244.1| antitoxin [Mycobacterium tuberculosis K85]
gi|339331913|emb|CCC27616.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=74
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/78 (39%), Positives = 43/78 (56%), Gaps = 6/78 (7%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQE-DAFHGFEPL 59
MRTTL IDDDVL V+ AR E ++ G ++S+LAR++L +P E D F F+
Sbjct 1 MRTTLQIDDDVLEDVRSIARSEGKSVGAVISELARRSL-----RPVGIVEVDGFPVFDVP 55
Query 60 PHRGGAVSNALIDRLRDE 77
P S ++ L D+
Sbjct 56 PDAPTVTSEDVVRALEDD 73
>gi|306778586|ref|ZP_07416923.1| antitoxin [Mycobacterium tuberculosis SUMu002]
gi|306786609|ref|ZP_07424931.1| antitoxin [Mycobacterium tuberculosis SUMu003]
gi|306790975|ref|ZP_07429297.1| antitoxin [Mycobacterium tuberculosis SUMu004]
13 more sequence titles
Length=74
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/43 (49%), Positives = 31/43 (73%), Gaps = 0/43 (0%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNP 43
MRTT+ +DDD+L A+K R R E++T G++ S+L QAL + P
Sbjct 1 MRTTIDLDDDILRALKRRQREERKTLGQLASELLAQALAAEPP 43
>gi|15843316|ref|NP_338353.1| CopG family DNA-binding protein [Mycobacterium tuberculosis CDC1551]
gi|121639612|ref|YP_979836.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148663561|ref|YP_001285084.1| hypothetical protein MRA_3733 [Mycobacterium tuberculosis H37Ra]
48 more sequence titles
Length=74
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/43 (49%), Positives = 31/43 (73%), Gaps = 0/43 (0%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNP 43
MRTT+ +DDD+L A+K R R E++T G++ S+L QAL + P
Sbjct 1 MRTTIDLDDDILRALKRRQREERKTLGQLASELLAQALAAEPP 43
>gi|340358884|ref|ZP_08681387.1| hypothetical protein HMPREF9062_0512 [Actinomyces sp. oral taxon
448 str. F0400]
gi|339885630|gb|EGQ75339.1| hypothetical protein HMPREF9062_0512 [Actinomyces sp. oral taxon
448 str. F0400]
Length=77
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/79 (37%), Positives = 40/79 (51%), Gaps = 8/79 (10%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL IDD VL +E+ARRE + G +SD A + + P + F P
Sbjct 1 MRTTLDIDDSVLAVAREKARREGLSLGRAVSDYALRGIRGGGPDAGSRGVPVF-----TP 55
Query 61 HRGG---AVSNALIDRLRD 76
+GG V+ L++R RD
Sbjct 56 PQGGPPHTVTLDLVERHRD 74
>gi|15842065|ref|NP_337102.1| hypothetical protein MT2606 [Mycobacterium tuberculosis CDC1551]
gi|31793712|ref|NP_856205.1| hypothetical protein Mb2559Ac [Mycobacterium bovis AF2122/97]
gi|57116999|ref|YP_177672.1| hypothetical protein Rv2530A [Mycobacterium tuberculosis H37Rv]
68 more sequence titles
Length=74
Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (38%), Positives = 42/78 (54%), Gaps = 6/78 (7%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQE-DAFHGFEPL 59
MRTTL IDDDVL + AR E ++ G ++S+LAR++L +P E D F F+
Sbjct 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-----RPVGIVEVDGFPVFDVP 55
Query 60 PHRGGAVSNALIDRLRDE 77
P S ++ L D+
Sbjct 56 PDAPTVTSEDVVRALEDD 73
>gi|134291478|ref|YP_001115247.1| hypothetical protein Bcep1808_6070 [Burkholderia vietnamiensis
G4]
gi|134134667|gb|ABO58992.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
Length=85
Score = 42.7 bits (99), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/80 (37%), Positives = 46/80 (58%), Gaps = 8/80 (10%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTT+ IDDDVL +ERA + + G+++SDLAR AL Q + + + +G +P
Sbjct 11 MRTTIDIDDDVLAFARERA-KPGTSIGKVISDLARAAL-----QRGTTNQSSRNGLPLMP 64
Query 61 HRGGA--VSNALIDRLRDEE 78
A V+ +++LRD+
Sbjct 65 VSATARPVTLDTVNQLRDDS 84
>gi|289448138|ref|ZP_06437882.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
gi|289421096|gb|EFD18297.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
Length=73
Score = 42.0 bits (97), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (77%), Gaps = 0/38 (0%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL 38
MRTTL +DDDV+ A +E A ++R+ G ++S+LAR+ L
Sbjct 1 MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGL 38
>gi|15609630|ref|NP_217009.1| hypothetical protein Rv2493 [Mycobacterium tuberculosis H37Rv]
gi|15842021|ref|NP_337058.1| hypothetical protein MT2568 [Mycobacterium tuberculosis CDC1551]
gi|31793673|ref|NP_856166.1| hypothetical protein Mb2521 [Mycobacterium bovis AF2122/97]
65 more sequence titles
Length=73
Score = 42.0 bits (97), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (77%), Gaps = 0/38 (0%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL 38
MRTTL +DDDV+ A +E A ++R+ G ++S+LAR+ L
Sbjct 1 MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGL 38
>gi|340627507|ref|YP_004745959.1| hypothetical protein MCAN_25321 [Mycobacterium canettii CIPT
140010059]
gi|340005697|emb|CCC44863.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=73
Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (77%), Gaps = 0/38 (0%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL 38
MRTTL +DDDV+ A +E A ++R+ G ++S+LAR+ L
Sbjct 1 MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGL 38
>gi|256826276|ref|YP_003150236.1| hypothetical protein Ksed_25070 [Kytococcus sedentarius DSM 20547]
gi|256689669|gb|ACV07471.1| hypothetical protein Ksed_25070 [Kytococcus sedentarius DSM 20547]
Length=76
Score = 40.4 bits (93), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/78 (38%), Positives = 38/78 (49%), Gaps = 4/78 (5%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL+I+DDVL AVK+RAR TAG+ P +G L
Sbjct 1 MRTTLTIEDDVLQAVKDRARARGTTAGQ----ELSALARAALSAPTFVDVGERNGLPVLQ 56
Query 61 HRGGAVSNALIDRLRDEE 78
HRG V+ ++ L DE+
Sbjct 57 HRGEPVTREQVEALLDED 74
>gi|325069051|ref|ZP_08127724.1| hypothetical protein AoriK_14579 [Actinomyces oris K20]
Length=76
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/82 (35%), Positives = 43/82 (53%), Gaps = 11/82 (13%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHG----F 56
MRTTL IDD VL +ERA R+ + G +SDLA + +++ + HG F
Sbjct 1 MRTTLEIDDRVLSLARERAHRDGVSLGRAVSDLALRGISHGG-------RTSRHGIPLFF 53
Query 57 EPLPHRGGAVSNALIDRLRDEE 78
P + V+ LI++ RD++
Sbjct 54 PPAGQQAHVVTPELIEQYRDDD 75
>gi|15610008|ref|NP_217387.1| hypothetical protein Rv2871 [Mycobacterium tuberculosis H37Rv]
gi|31794048|ref|NP_856541.1| hypothetical protein Mb2896 [Mycobacterium bovis AF2122/97]
gi|121638753|ref|YP_978977.1| hypothetical protein BCG_2893 [Mycobacterium bovis BCG str. Pasteur
1173P2]
73 more sequence titles
Length=85
Score = 40.0 bits (92), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/61 (38%), Positives = 29/61 (48%), Gaps = 3/61 (4%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAAS---QEDAFHGFE 57
MRTT+ IDD++ VK +A R RT +L D R+ L PQ A Q G
Sbjct 1 MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNPPKPQAAGRYRVQPSGKGGLR 60
Query 58 P 58
P
Sbjct 61 P 61
>gi|254551940|ref|ZP_05142387.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=85
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/61 (38%), Positives = 29/61 (48%), Gaps = 3/61 (4%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAAS---QEDAFHGFE 57
MRTT+ IDD++ VK +A R RT +L D R+ L PQ A Q G
Sbjct 1 MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNPPKPQAAGRYRVQPSGKGGMR 60
Query 58 P 58
P
Sbjct 61 P 61
>gi|334319153|ref|YP_004551712.1| hypothetical protein Sinme_6079 [Sinorhizobium meliloti AK83]
gi|333814848|gb|AEG07516.1| hypothetical protein SinmeB_6397 [Sinorhizobium meliloti BL225C]
gi|334099580|gb|AEG57589.1| hypothetical protein Sinme_6079 [Sinorhizobium meliloti AK83]
Length=47
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/45 (47%), Positives = 32/45 (72%), Gaps = 1/45 (2%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQP 45
MRTTLSI+DDV +A + A ++++ GE++S+LAR A T +P
Sbjct 1 MRTTLSIEDDVRIAARAMATQQQQRIGEVISELAR-AFTEPAARP 44
>gi|336035908|gb|AEH81839.1| hypothetical protein SM11_pC0766 [Sinorhizobium meliloti SM11]
Length=54
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/45 (47%), Positives = 32/45 (72%), Gaps = 1/45 (2%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQP 45
MRTTLSI+DDV +A + A ++++ GE++S+LAR A T +P
Sbjct 8 MRTTLSIEDDVRIAARAMATQQQQRIGEVISELAR-AFTEPAARP 51
>gi|254364141|ref|ZP_04980187.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|289554970|ref|ZP_06444180.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|289744986|ref|ZP_06504364.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|134149655|gb|EBA41700.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|289439602|gb|EFD22095.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|289685514|gb|EFD53002.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|328459460|gb|AEB04883.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length=90
Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/84 (35%), Positives = 41/84 (49%), Gaps = 15/84 (17%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL++DDDV+ V++ RE+R ++++D R+AL P QE + P
Sbjct 5 MRTTLTLDDDVVRLVEDAVHRERRPMKQVINDALRRALA----PPVKRQEQ----YRLEP 56
Query 61 HRGGAVS-------NALIDRLRDE 77
H S N L D L DE
Sbjct 57 HESAVRSGLDLAGFNKLADELEDE 80
>gi|15840686|ref|NP_335723.1| hypothetical protein MT1279 [Mycobacterium tuberculosis CDC1551]
gi|13880873|gb|AAK45537.1| hypothetical protein MT1279 [Mycobacterium tuberculosis CDC1551]
Length=98
Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/84 (35%), Positives = 41/84 (49%), Gaps = 15/84 (17%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL++DDDV+ V++ RE+R ++++D R+AL P QE + P
Sbjct 13 MRTTLTLDDDVVRLVEDAVHRERRPMKQVINDALRRALA----PPVKRQEQ----YRLEP 64
Query 61 HRGGAVS-------NALIDRLRDE 77
H S N L D L DE
Sbjct 65 HESAVRSGLDLAGFNKLADELEDE 88
>gi|15608381|ref|NP_215757.1| hypothetical protein Rv1241 [Mycobacterium tuberculosis H37Rv]
gi|31792434|ref|NP_854927.1| hypothetical protein Mb1273 [Mycobacterium bovis AF2122/97]
gi|121637170|ref|YP_977393.1| hypothetical protein BCG_1301 [Mycobacterium bovis BCG str. Pasteur
1173P2]
68 more sequence titles
Length=86
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/84 (35%), Positives = 41/84 (49%), Gaps = 15/84 (17%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL++DDDV+ V++ RE+R ++++D R+AL P QE + P
Sbjct 1 MRTTLTLDDDVVRLVEDAVHRERRPMKQVINDALRRALA----PPVKRQE----QYRLEP 52
Query 61 HRGGAVS-------NALIDRLRDE 77
H S N L D L DE
Sbjct 53 HESAVRSGLDLAGFNKLADELEDE 76
>gi|240168913|ref|ZP_04747572.1| hypothetical protein MkanA1_06350 [Mycobacterium kansasii ATCC
12478]
Length=93
Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/38 (45%), Positives = 27/38 (72%), Gaps = 0/38 (0%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL 38
MRTTL++DDDV+ ++E RE+R +++D R+AL
Sbjct 8 MRTTLTLDDDVVRLIEEAVHRERRPMKHVINDALRKAL 45
>gi|294054234|ref|YP_003547892.1| hypothetical protein Caka_0698 [Coraliomargarita akajimensis
DSM 45221]
gi|293613567|gb|ADE53722.1| conserved hypothetical protein [Coraliomargarita akajimensis
DSM 45221]
Length=84
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTT+ I D +L A+KERA EKR ++++D+ + L Q + + G P
Sbjct 1 MRTTIDIKDAILDALKERAHLEKRPMTKVVNDVLEKGLAAPTKQTKKVRLKTY-GLGIRP 59
Query 61 HRGGAVSNALIDRLRDEE 78
G N + D+L E+
Sbjct 60 AFRGMSLNQVYDQLETED 77
>gi|157382509|gb|ABV48745.1| Rv2871 [Mycobacterium kansasii ATCC 12478]
Length=85
Score = 36.2 bits (82), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/49 (45%), Positives = 27/49 (56%), Gaps = 1/49 (2%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQ 49
MRTT+ IDD++ VK RA R RT +L D R L N Q AA +
Sbjct 1 MRTTIRIDDELYREVKARAARSGRTVAAVLEDAVRCGL-NPPGQSAAGR 48
>gi|33864608|ref|NP_896167.1| hypothetical protein SYNW0072 [Synechococcus sp. WH 8102]
gi|33632131|emb|CAE06587.1| hypothetical protein SYNW0072 [Synechococcus sp. WH 8102]
Length=102
Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL--TNQNPQPAAS 48
M+TT+ + D ++ K+RA ++KRT ++++D RQ L T+ + PAAS
Sbjct 1 MKTTIDLPDALIQQAKQRALQQKRTLKDLIADYIRQGLKGTSLSAMPAAS 50
>gi|330818819|ref|YP_004351036.1| hypothetical protein bgla_3p0110 [Burkholderia gladioli BSR3]
gi|327374361|gb|AEA65713.1| hypothetical protein bgla_3p0110 [Burkholderia gladioli BSR3]
Length=73
Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/77 (43%), Positives = 42/77 (55%), Gaps = 6/77 (7%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTTL IDDDVL + RA RE + G I+S LAR AL A+ +G LP
Sbjct 1 MRTTLEIDDDVLALARARADREHVSIGRIISQLARAALQPA-----AAAPTTRNGLPVLP 55
Query 61 HRGGAVSNALIDRLRDE 77
V+ L+++LRDE
Sbjct 56 S-ARTVTPELVNQLRDE 71
>gi|88810688|ref|ZP_01125945.1| hypothetical protein NB231_16448 [Nitrococcus mobilis Nb-231]
gi|88792318|gb|EAR23428.1| hypothetical protein NB231_16448 [Nitrococcus mobilis Nb-231]
Length=92
Score = 35.8 bits (81), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/64 (35%), Positives = 35/64 (55%), Gaps = 6/64 (9%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
MRTT++++ DV +KE A R + + E L+D+ R+ LT+Q ++ F P
Sbjct 5 MRTTVTLEPDVAAKLKELAHRRRASFKETLNDVLRKGLTSQ------AKAGRSEPFVVKP 58
Query 61 HRGG 64
H GG
Sbjct 59 HSGG 62
>gi|258593475|emb|CBE69814.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length=75
Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP 60
M+TTL+IDD V++ +K A R+ RT E++ R L Q + G PLP
Sbjct 1 MKTTLNIDDSVMVLLKREAARQGRTMSELVESALRLMLRAQRRR---------SGLPPLP 51
>gi|240171735|ref|ZP_04750394.1| hypothetical protein MkanA1_20645 [Mycobacterium kansasii ATCC
12478]
Length=86
Score = 34.3 bits (77), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/49 (43%), Positives = 27/49 (56%), Gaps = 1/49 (2%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQ 49
+RTT+ IDD++ VK RA R RT +L D R L N Q AA +
Sbjct 2 VRTTIRIDDELYREVKARAARSGRTVAAVLEDAVRCGL-NPPGQSAAGR 49
>gi|15842141|ref|NP_337178.1| hypothetical protein MT2676 [Mycobacterium tuberculosis CDC1551]
gi|31793786|ref|NP_856279.1| hypothetical protein Mb2633 [Mycobacterium bovis AF2122/97]
gi|57117004|ref|YP_177673.1| hypothetical protein Rv2601A [Mycobacterium tuberculosis H37Rv]
74 more sequence titles
Length=95
Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/72 (31%), Positives = 38/72 (53%), Gaps = 12/72 (16%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQN-----PQPAASQEDAFHG 55
M+TTL + D+++ A+K RA ++ R +++++L R L+ + P P Q
Sbjct 1 MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQ------ 54
Query 56 FEPLPHRGGAVS 67
PL H GGA +
Sbjct 55 -LPLVHCGGAAT 65
>gi|332321844|sp|P0CW33.1|VPB25_MYCTU RecName: Full=Antitoxin VapB25
Length=85
Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/61 (35%), Positives = 30/61 (50%), Gaps = 3/61 (4%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALT---NQNPQPAASQEDAFHGFE 57
MRTT+SI D++L K RAR ++ G ++ D R+ L +P DA G
Sbjct 1 MRTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGGARPTVPVFDAGTGPR 60
Query 58 P 58
P
Sbjct 61 P 61
>gi|121636191|ref|YP_976414.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988664|ref|YP_002643351.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str.
Tokyo 172]
gi|121491838|emb|CAL70300.1| Conserved hypothetical protein, antitoxin [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224771777|dbj|BAH24583.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341600207|emb|CCC62876.1| conserved hypothetical protein, antitoxin [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=85
Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/61 (35%), Positives = 30/61 (50%), Gaps = 3/61 (4%)
Query 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALT---NQNPQPAASQEDAFHGFE 57
MRTT+SI D++L K RAR ++ G ++ D R+ L +P DA G
Sbjct 1 MRTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGGARPTVPVFDAGTGPR 60
Query 58 P 58
P
Sbjct 61 P 61
Lambda K H
0.315 0.131 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128850890930
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40