BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3321c

Length=80
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610457|ref|NP_217838.1|  hypothetical protein Rv3321c [Mycob...   161    3e-38
gi|206601847|gb|EDZ38330.1|  Hypothetical protein CGL2_11278039 [...  75.5    2e-12
gi|56478773|ref|YP_160362.1|  hypothetical protein ebA5867 [Aroma...  72.8    2e-11
gi|114331351|ref|YP_747573.1|  hypothetical protein Neut_1360 [Ni...  71.6    4e-11
gi|113954589|ref|YP_729373.1|  hypothetical protein sync_0136 [Sy...  62.4    2e-08
gi|317967918|ref|ZP_07969308.1|  hypothetical protein SCB02_00122...  56.6    1e-06
gi|196230684|ref|ZP_03129545.1|  conserved hypothetical protein [...  56.6    1e-06
gi|87123103|ref|ZP_01078954.1|  hypothetical protein RS9917_04570...  55.5    2e-06
gi|337267946|ref|YP_004612001.1|  hypothetical protein Mesop_3461...  55.5    3e-06
gi|121595341|ref|YP_987237.1|  hypothetical protein Ajs_3027 [Aci...  55.5    3e-06
gi|344199816|ref|YP_004784142.1|  hypothetical protein Acife_1683...  52.4    2e-05
gi|87123275|ref|ZP_01079126.1|  hypothetical protein RS9917_05430...  52.4    2e-05
gi|336038110|gb|AEH84040.1|  hypothetical protein SM11_pD1208 [Si...  51.6    3e-05
gi|294339104|emb|CAZ87458.1|  putative transcriptional regulator ...  51.6    4e-05
gi|16264147|ref|NP_436939.1|  hypothetical protein SM_b20413 [Sin...  50.8    6e-05
gi|218458497|ref|ZP_03498588.1|  hypothetical protein RetlK5_0316...  48.1    4e-04
gi|241518560|ref|YP_002979188.1|  hypothetical protein Rleg_5863 ...  47.0    9e-04
gi|304413693|ref|ZP_07395137.1|  hypothetical protein REG_0768 [C...  47.0    0.001
gi|289575235|ref|ZP_06455462.1|  antitoxin [Mycobacterium tubercu...  45.1    0.003
gi|306778586|ref|ZP_07416923.1|  antitoxin [Mycobacterium tubercu...  44.3    0.006
gi|15843316|ref|NP_338353.1|  CopG family DNA-binding protein [My...  44.3    0.006
gi|340358884|ref|ZP_08681387.1|  hypothetical protein HMPREF9062_...  43.5    0.009
gi|15842065|ref|NP_337102.1|  hypothetical protein MT2606 [Mycoba...  43.1    0.015
gi|134291478|ref|YP_001115247.1|  hypothetical protein Bcep1808_6...  42.7    0.020
gi|289448138|ref|ZP_06437882.1|  antitoxin [Mycobacterium tubercu...  42.0    0.033
gi|15609630|ref|NP_217009.1|  hypothetical protein Rv2493 [Mycoba...  42.0    0.033
gi|340627507|ref|YP_004745959.1|  hypothetical protein MCAN_25321...  42.0    0.034
gi|256826276|ref|YP_003150236.1|  hypothetical protein Ksed_25070...  40.4    0.097
gi|325069051|ref|ZP_08127724.1|  hypothetical protein AoriK_14579...  40.0    0.10 
gi|15610008|ref|NP_217387.1|  hypothetical protein Rv2871 [Mycoba...  40.0    0.13 
gi|254551940|ref|ZP_05142387.1|  antitoxin [Mycobacterium tubercu...  39.7    0.13 
gi|334319153|ref|YP_004551712.1|  hypothetical protein Sinme_6079...  39.3    0.18 
gi|336035908|gb|AEH81839.1|  hypothetical protein SM11_pC0766 [Si...  38.9    0.23 
gi|254364141|ref|ZP_04980187.1|  conserved hypothetical protein [...  38.1    0.39 
gi|15840686|ref|NP_335723.1|  hypothetical protein MT1279 [Mycoba...  38.1    0.39 
gi|15608381|ref|NP_215757.1|  hypothetical protein Rv1241 [Mycoba...  38.1    0.41 
gi|240168913|ref|ZP_04747572.1|  hypothetical protein MkanA1_0635...  37.7    0.50 
gi|294054234|ref|YP_003547892.1|  hypothetical protein Caka_0698 ...  37.4    0.71 
gi|157382509|gb|ABV48745.1|  Rv2871 [Mycobacterium kansasii ATCC ...  36.2    1.8  
gi|33864608|ref|NP_896167.1|  hypothetical protein SYNW0072 [Syne...  35.8    2.3  
gi|330818819|ref|YP_004351036.1|  hypothetical protein bgla_3p011...  35.8    2.3  
gi|88810688|ref|ZP_01125945.1|  hypothetical protein NB231_16448 ...  35.8    2.4  
gi|258593475|emb|CBE69814.1|  conserved protein of unknown functi...  34.3    6.4  
gi|240171735|ref|ZP_04750394.1|  hypothetical protein MkanA1_2064...  34.3    7.0  
gi|15842141|ref|NP_337178.1|  hypothetical protein MT2676 [Mycoba...  33.9    8.0  
gi|332321844|sp|P0CW33.1|VPB25_MYCTU  RecName: Full=Antitoxin VapB25  33.5    9.7  
gi|121636191|ref|YP_976414.1|  antitoxin [Mycobacterium bovis BCG...  33.5    9.7  


>gi|15610457|ref|NP_217838.1| hypothetical protein Rv3321c [Mycobacterium tuberculosis H37Rv]
 gi|15842913|ref|NP_337950.1| CopG family DNA-binding protein [Mycobacterium tuberculosis CDC1551]
 gi|31794502|ref|NP_856995.1| hypothetical protein Mb3350c [Mycobacterium bovis AF2122/97]
 77 more sequence titles
 Length=80

 Score =  161 bits (408),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP
Sbjct  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60

Query  61  HRGGAVSNALIDRLRDEEAV  80
           HRGGAVSNALIDRLRDEEAV
Sbjct  61  HRGGAVSNALIDRLRDEEAV  80


>gi|206601847|gb|EDZ38330.1| Hypothetical protein CGL2_11278039 [Leptospirillum sp. Group 
II '5-way CG']
Length=152

 Score = 75.5 bits (184),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 36/78 (47%), Positives = 53/78 (68%), Gaps = 0/78 (0%)

Query  1    MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
            MRTTL ID+DVL   +E ARR+ ++ G+++SDL RQAL   + +  +S+  +  GF P P
Sbjct  73   MRTTLDIDEDVLETARELARRQGKSIGKVISDLGRQALMEMSGRDLSSETVSVFGFRPFP  132

Query  61   HRGGAVSNALIDRLRDEE  78
             RGG V+N  ID LR+++
Sbjct  133  KRGGVVTNDRIDALREDD  150


>gi|56478773|ref|YP_160362.1| hypothetical protein ebA5867 [Aromatoleum aromaticum EbN1]
 gi|56314816|emb|CAI09461.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length=81

 Score = 72.8 bits (177),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 39/81 (49%), Positives = 49/81 (61%), Gaps = 1/81 (1%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTN-QNPQPAASQEDAFHGFEPL  59
           MRTTL I+ DVL A KE AR++  + G+++S L R+ L     PQ    Q  A  GFEP 
Sbjct  1   MRTTLDIESDVLAAAKEIARQQHTSVGKVISQLVRRTLIGAAAPQTVVRQTPAVPGFEPF  60

Query  60  PHRGGAVSNALIDRLRDEEAV  80
           P R   V+N LIDRLRD E +
Sbjct  61  PARDVIVTNELIDRLRDAEGI  81


>gi|114331351|ref|YP_747573.1| hypothetical protein Neut_1360 [Nitrosomonas eutropha C91]
 gi|114308365|gb|ABI59608.1| conserved hypothetical protein [Nitrosomonas eutropha C91]
Length=92

 Score = 71.6 bits (174),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 40/82 (49%), Positives = 53/82 (65%), Gaps = 3/82 (3%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDA--FHGFEP  58
           +RTT+ I++DVL A KE AR E  + G+++S L RQAL     +  +S +DA    GF P
Sbjct  12  VRTTIDIENDVLAAAKEIARTENVSVGKVISRLVRQALAGHVAE-VSSPDDASSVTGFRP  70

Query  59  LPHRGGAVSNALIDRLRDEEAV  80
            P RG  VSN LI+RLRDEE +
Sbjct  71  FPSRGVIVSNELINRLRDEEGI  92


>gi|113954589|ref|YP_729373.1| hypothetical protein sync_0136 [Synechococcus sp. CC9311]
 gi|113881940|gb|ABI46898.1| conserved hypothetical protein [Synechococcus sp. CC9311]
Length=81

 Score = 62.4 bits (150),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 39/83 (47%), Positives = 53/83 (64%), Gaps = 6/83 (7%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQE--DAFHGFEP  58
           MRTTL +DDDVL A +  AR+ +R+ G+++SDLARQ L+   P    SQ   +   G   
Sbjct  1   MRTTLRLDDDVLAAARVLARQRRRSVGDVISDLARQTLS--RPADGGSQNVLEQRSGLPQ  58

Query  59  LPHR--GGAVSNALIDRLRDEEA  79
           LP +  GGAV   L+++LRDEEA
Sbjct  59  LPVKASGGAVDLELVNQLRDEEA  81


>gi|317967918|ref|ZP_07969308.1| hypothetical protein SCB02_00122 [Synechococcus sp. CB0205]
Length=86

 Score = 56.6 bits (135),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 36/82 (44%), Positives = 50/82 (61%), Gaps = 8/82 (9%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTN---QNPQPAASQEDAFHGFE  57
           MRTTLS+DDDVL A K  AR+ K+  G ++S+LARQ L     QNP+PA  +    +G  
Sbjct  8   MRTTLSLDDDVLAAAKVLARQRKQPIGSVISELARQGLAQANRQNPEPAQIKR---NGLM  64

Query  58  PLPHR--GGAVSNALIDRLRDE  77
            +P R  G  V   L++ LR++
Sbjct  65  LIPRRLDGSPVDLELVNNLRED  86


>gi|196230684|ref|ZP_03129545.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
 gi|196225025|gb|EDY19534.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
Length=80

 Score = 56.6 bits (135),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 32/74 (44%), Positives = 43/74 (59%), Gaps = 1/74 (1%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL ID DVL A KE + R KR+ G ++SDLAR AL  +    A       +GFE + 
Sbjct  1   MRTTLDIDSDVLAAAKEISARTKRSVGHVISDLARAALLKRGKSKARISR-MINGFEVIS  59

Query  61  HRGGAVSNALIDRL  74
             G  V++ L+ +L
Sbjct  60  ADGRVVTSELVRKL  73


>gi|87123103|ref|ZP_01078954.1| hypothetical protein RS9917_04570 [Synechococcus sp. RS9917]
 gi|86168823|gb|EAQ70079.1| hypothetical protein RS9917_04570 [Synechococcus sp. RS9917]
Length=79

 Score = 55.5 bits (132),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 33/78 (43%), Positives = 46/78 (59%), Gaps = 0/78 (0%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL +DDDVL A +  AR++  + GE++S+LARQAL           E +     P+ 
Sbjct  1   MRTTLQLDDDVLDAARVLARQQHLSVGEVISELARQALRRPAGLEEPPSERSGLPLLPIK  60

Query  61  HRGGAVSNALIDRLRDEE  78
             GG V   L+++LRDEE
Sbjct  61  SSGGVVDLNLVNQLRDEE  78


>gi|337267946|ref|YP_004612001.1| hypothetical protein Mesop_3461 [Mesorhizobium opportunistum 
WSM2075]
 gi|336028256|gb|AEH87907.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075]
Length=87

 Score = 55.5 bits (132),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 35/76 (47%), Positives = 47/76 (62%), Gaps = 3/76 (3%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL+IDDDVLLA K  AR++ R+ GE++SDLARQ+L  + PQ A  + +        P
Sbjct  1   MRTTLAIDDDVLLAAKAMARQQDRSIGEVISDLARQSL--RRPQ-AGGERNGIPLLSARP  57

Query  61  HRGGAVSNALIDRLRD  76
                V   +I+ LRD
Sbjct  58  DDPPLVDLEMINALRD  73


>gi|121595341|ref|YP_987237.1| hypothetical protein Ajs_3027 [Acidovorax sp. JS42]
 gi|120607421|gb|ABM43161.1| conserved hypothetical protein [Acidovorax sp. JS42]
Length=71

 Score = 55.5 bits (132),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 33/71 (47%), Positives = 42/71 (60%), Gaps = 3/71 (4%)

Query  13  LAVKERARREKRTAGEILSDLARQALTNQNPQPAASQ---EDAFHGFEPLPHRGGAVSNA  69
           +A KE AR+E  + G+++S L R ALT Q  Q AA+      +  GF P   RG  VSN 
Sbjct  1   MAAKELARQENVSLGKVVSRLLRMALTGQVGQIAAAAPVGTASATGFVPFAPRGVVVSNE  60

Query  70  LIDRLRDEEAV  80
           LID+LRD E V
Sbjct  61  LIDKLRDSEGV  71


>gi|344199816|ref|YP_004784142.1| hypothetical protein Acife_1683 [Acidithiobacillus ferrivorans 
SS3]
 gi|343775260|gb|AEM47816.1| hypothetical protein Acife_1683 [Acidithiobacillus ferrivorans 
SS3]
Length=77

 Score = 52.4 bits (124),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 35/79 (45%), Positives = 47/79 (60%), Gaps = 6/79 (7%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL+IDDDVL A K  A R+ ++ G ++S L RQAL  QN     S   + +G   LP
Sbjct  1   MRTTLAIDDDVLAAAKGLADRQHKSVGAVVSALLRQALQPQN----TSGGHSRNGIPLLP  56

Query  61  HRGGAVSNAL--IDRLRDE  77
            R  A+   L  +++LRDE
Sbjct  57  VRPDALPATLEIVNQLRDE  75


>gi|87123275|ref|ZP_01079126.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
 gi|86168995|gb|EAQ70251.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
Length=82

 Score = 52.4 bits (124),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 35/81 (44%), Positives = 52/81 (65%), Gaps = 8/81 (9%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALT--NQNPQPAASQEDAFHGFEP  58
           MRTTL IDDD+L A K+ A++++ +AG+++S L RQALT  + +P  AA++     GF P
Sbjct  1   MRTTLDIDDDLLQAAKDLAKQQRMSAGQVVSTLLRQALTQAHHSPSEAAARPHPC-GFRP  59

Query  59  L---PHRGGAVSNALIDRLRD  76
               P R    +NA ++ LRD
Sbjct  60  FAGDPSR--ITNNADVEALRD  78


>gi|336038110|gb|AEH84040.1| hypothetical protein SM11_pD1208 [Sinorhizobium meliloti SM11]
Length=75

 Score = 51.6 bits (122),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 31/79 (40%), Positives = 51/79 (65%), Gaps = 4/79 (5%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL+IDDDVL+A K  A +++R+ GE++S+LAR++L  + P+ +  + +      P P
Sbjct  1   MRTTLAIDDDVLIAAKAMATQQQRSVGEVISELARRSL--RRPR-SGGERNGIPLLSPRP  57

Query  61  HRGGAVSNALIDRLRDEEA  79
                V+  +++ LRDE A
Sbjct  58  D-APPVTLEIVNALRDERA  75


>gi|294339104|emb|CAZ87458.1| putative transcriptional regulator [Thiomonas sp. 3As]
Length=75

 Score = 51.6 bits (122),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 33/77 (43%), Positives = 47/77 (62%), Gaps = 4/77 (5%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTT+SIDDDVL A +  A R+ ++ GE+LS LARQAL     +PA ++ +        P
Sbjct  1   MRTTVSIDDDVLNAARHLAARQHKSVGEVLSALARQALRR---EPALAERNGVPLLASQP  57

Query  61  HRGGAVSNALIDRLRDE  77
                V+  L+++LRDE
Sbjct  58  D-AKPVTLELVNQLRDE  73


>gi|16264147|ref|NP_436939.1| hypothetical protein SM_b20413 [Sinorhizobium meliloti 1021]
 gi|334319719|ref|YP_004556348.1| hypothetical protein Sinme_3766 [Sinorhizobium meliloti AK83]
 gi|15140272|emb|CAC48799.1| HYPOTHETICAL PROTEIN SM_b20413 [Sinorhizobium meliloti 1021]
 gi|333815878|gb|AEG08545.1| hypothetical protein SinmeB_4262 [Sinorhizobium meliloti BL225C]
 gi|334097458|gb|AEG55468.1| hypothetical protein Sinme_3766 [Sinorhizobium meliloti AK83]
Length=75

 Score = 50.8 bits (120),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 31/79 (40%), Positives = 51/79 (65%), Gaps = 4/79 (5%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL+IDDDVL+A K  A +++R+ GE++S+LAR++L  + P+ +  + +      P P
Sbjct  1   MRTTLAIDDDVLIAAKAMATQQQRSVGEVISELARRSL--RRPR-SGGERNGIPLLSPRP  57

Query  61  HRGGAVSNALIDRLRDEEA  79
                V+  +++ LRDE A
Sbjct  58  D-APPVTLEIVNALRDELA  75


>gi|218458497|ref|ZP_03498588.1| hypothetical protein RetlK5_03168 [Rhizobium etli Kim 5]
Length=63

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 22/38 (58%), Positives = 32/38 (85%), Gaps = 0/38 (0%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL  38
           MRTTL+IDDDVL+A K  A ++ R+ GE++S+LAR++L
Sbjct  7   MRTTLAIDDDVLIAAKAMATQQHRSVGEVISELARRSL  44


>gi|241518560|ref|YP_002979188.1| hypothetical protein Rleg_5863 [Rhizobium leguminosarum bv. trifolii 
WSM1325]
 gi|240862973|gb|ACS60637.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii 
WSM1325]
Length=75

 Score = 47.0 bits (110),  Expect = 9e-04, Method: Compositional matrix adjust.
 Identities = 22/38 (58%), Positives = 31/38 (82%), Gaps = 0/38 (0%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL  38
           MRTTL+IDDDVL A K  A ++ R+ GE++S+LAR++L
Sbjct  1   MRTTLAIDDDVLTAAKAMATQQHRSVGEVISELARRSL  38


>gi|304413693|ref|ZP_07395137.1| hypothetical protein REG_0768 [Candidatus Regiella insecticola 
LSR1]
 gi|304283784|gb|EFL92178.1| hypothetical protein REG_0768 [Candidatus Regiella insecticola 
LSR1]
Length=82

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 33/79 (42%), Positives = 47/79 (60%), Gaps = 9/79 (11%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL+IDDD+L A K  A R+ ++ G ++S LARQAL      P+  + +   G   L 
Sbjct  9   MRTTLAIDDDILAAAKGLAARQNKSLGAVISSLARQALH----VPSHPKRN---GIPLLL  61

Query  61  HR--GGAVSNALIDRLRDE  77
            R  G  V+  L+++LRDE
Sbjct  62  VRSDGMLVTPELVNQLRDE  80


>gi|289575235|ref|ZP_06455462.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|339632557|ref|YP_004724199.1| hypothetical protein MAF_25460 [Mycobacterium africanum GM041182]
 gi|289539666|gb|EFD44244.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|339331913|emb|CCC27616.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=74

 Score = 45.1 bits (105),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 30/78 (39%), Positives = 43/78 (56%), Gaps = 6/78 (7%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQE-DAFHGFEPL  59
           MRTTL IDDDVL  V+  AR E ++ G ++S+LAR++L     +P    E D F  F+  
Sbjct  1   MRTTLQIDDDVLEDVRSIARSEGKSVGAVISELARRSL-----RPVGIVEVDGFPVFDVP  55

Query  60  PHRGGAVSNALIDRLRDE  77
           P      S  ++  L D+
Sbjct  56  PDAPTVTSEDVVRALEDD  73


>gi|306778586|ref|ZP_07416923.1| antitoxin [Mycobacterium tuberculosis SUMu002]
 gi|306786609|ref|ZP_07424931.1| antitoxin [Mycobacterium tuberculosis SUMu003]
 gi|306790975|ref|ZP_07429297.1| antitoxin [Mycobacterium tuberculosis SUMu004]
 13 more sequence titles
 Length=74

 Score = 44.3 bits (103),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 21/43 (49%), Positives = 31/43 (73%), Gaps = 0/43 (0%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNP  43
           MRTT+ +DDD+L A+K R R E++T G++ S+L  QAL  + P
Sbjct  1   MRTTIDLDDDILRALKRRQREERKTLGQLASELLAQALAAEPP  43


>gi|15843316|ref|NP_338353.1| CopG family DNA-binding protein [Mycobacterium tuberculosis CDC1551]
 gi|121639612|ref|YP_979836.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663561|ref|YP_001285084.1| hypothetical protein MRA_3733 [Mycobacterium tuberculosis H37Ra]
 48 more sequence titles
 Length=74

 Score = 44.3 bits (103),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 21/43 (49%), Positives = 31/43 (73%), Gaps = 0/43 (0%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNP  43
           MRTT+ +DDD+L A+K R R E++T G++ S+L  QAL  + P
Sbjct  1   MRTTIDLDDDILRALKRRQREERKTLGQLASELLAQALAAEPP  43


>gi|340358884|ref|ZP_08681387.1| hypothetical protein HMPREF9062_0512 [Actinomyces sp. oral taxon 
448 str. F0400]
 gi|339885630|gb|EGQ75339.1| hypothetical protein HMPREF9062_0512 [Actinomyces sp. oral taxon 
448 str. F0400]
Length=77

 Score = 43.5 bits (101),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 29/79 (37%), Positives = 40/79 (51%), Gaps = 8/79 (10%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL IDD VL   +E+ARRE  + G  +SD A + +    P   +     F      P
Sbjct  1   MRTTLDIDDSVLAVAREKARREGLSLGRAVSDYALRGIRGGGPDAGSRGVPVF-----TP  55

Query  61  HRGG---AVSNALIDRLRD  76
            +GG    V+  L++R RD
Sbjct  56  PQGGPPHTVTLDLVERHRD  74


>gi|15842065|ref|NP_337102.1| hypothetical protein MT2606 [Mycobacterium tuberculosis CDC1551]
 gi|31793712|ref|NP_856205.1| hypothetical protein Mb2559Ac [Mycobacterium bovis AF2122/97]
 gi|57116999|ref|YP_177672.1| hypothetical protein Rv2530A [Mycobacterium tuberculosis H37Rv]
 68 more sequence titles
 Length=74

 Score = 43.1 bits (100),  Expect = 0.015, Method: Compositional matrix adjust.
 Identities = 29/78 (38%), Positives = 42/78 (54%), Gaps = 6/78 (7%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQE-DAFHGFEPL  59
           MRTTL IDDDVL   +  AR E ++ G ++S+LAR++L     +P    E D F  F+  
Sbjct  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-----RPVGIVEVDGFPVFDVP  55

Query  60  PHRGGAVSNALIDRLRDE  77
           P      S  ++  L D+
Sbjct  56  PDAPTVTSEDVVRALEDD  73


>gi|134291478|ref|YP_001115247.1| hypothetical protein Bcep1808_6070 [Burkholderia vietnamiensis 
G4]
 gi|134134667|gb|ABO58992.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
Length=85

 Score = 42.7 bits (99),  Expect = 0.020, Method: Compositional matrix adjust.
 Identities = 29/80 (37%), Positives = 46/80 (58%), Gaps = 8/80 (10%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTT+ IDDDVL   +ERA +   + G+++SDLAR AL     Q   + + + +G   +P
Sbjct  11  MRTTIDIDDDVLAFARERA-KPGTSIGKVISDLARAAL-----QRGTTNQSSRNGLPLMP  64

Query  61  HRGGA--VSNALIDRLRDEE  78
               A  V+   +++LRD+ 
Sbjct  65  VSATARPVTLDTVNQLRDDS  84


>gi|289448138|ref|ZP_06437882.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
 gi|289421096|gb|EFD18297.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
Length=73

 Score = 42.0 bits (97),  Expect = 0.033, Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 29/38 (77%), Gaps = 0/38 (0%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL  38
           MRTTL +DDDV+ A +E A  ++R+ G ++S+LAR+ L
Sbjct  1   MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGL  38


>gi|15609630|ref|NP_217009.1| hypothetical protein Rv2493 [Mycobacterium tuberculosis H37Rv]
 gi|15842021|ref|NP_337058.1| hypothetical protein MT2568 [Mycobacterium tuberculosis CDC1551]
 gi|31793673|ref|NP_856166.1| hypothetical protein Mb2521 [Mycobacterium bovis AF2122/97]
 65 more sequence titles
 Length=73

 Score = 42.0 bits (97),  Expect = 0.033, Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 29/38 (77%), Gaps = 0/38 (0%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL  38
           MRTTL +DDDV+ A +E A  ++R+ G ++S+LAR+ L
Sbjct  1   MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGL  38


>gi|340627507|ref|YP_004745959.1| hypothetical protein MCAN_25321 [Mycobacterium canettii CIPT 
140010059]
 gi|340005697|emb|CCC44863.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=73

 Score = 42.0 bits (97),  Expect = 0.034, Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 29/38 (77%), Gaps = 0/38 (0%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL  38
           MRTTL +DDDV+ A +E A  ++R+ G ++S+LAR+ L
Sbjct  1   MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGL  38


>gi|256826276|ref|YP_003150236.1| hypothetical protein Ksed_25070 [Kytococcus sedentarius DSM 20547]
 gi|256689669|gb|ACV07471.1| hypothetical protein Ksed_25070 [Kytococcus sedentarius DSM 20547]
Length=76

 Score = 40.4 bits (93),  Expect = 0.097, Method: Compositional matrix adjust.
 Identities = 29/78 (38%), Positives = 38/78 (49%), Gaps = 4/78 (5%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL+I+DDVL AVK+RAR    TAG+                P        +G   L 
Sbjct  1   MRTTLTIEDDVLQAVKDRARARGTTAGQ----ELSALARAALSAPTFVDVGERNGLPVLQ  56

Query  61  HRGGAVSNALIDRLRDEE  78
           HRG  V+   ++ L DE+
Sbjct  57  HRGEPVTREQVEALLDED  74


>gi|325069051|ref|ZP_08127724.1| hypothetical protein AoriK_14579 [Actinomyces oris K20]
Length=76

 Score = 40.0 bits (92),  Expect = 0.10, Method: Compositional matrix adjust.
 Identities = 28/82 (35%), Positives = 43/82 (53%), Gaps = 11/82 (13%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHG----F  56
           MRTTL IDD VL   +ERA R+  + G  +SDLA + +++           + HG    F
Sbjct  1   MRTTLEIDDRVLSLARERAHRDGVSLGRAVSDLALRGISHGG-------RTSRHGIPLFF  53

Query  57  EPLPHRGGAVSNALIDRLRDEE  78
            P   +   V+  LI++ RD++
Sbjct  54  PPAGQQAHVVTPELIEQYRDDD  75


>gi|15610008|ref|NP_217387.1| hypothetical protein Rv2871 [Mycobacterium tuberculosis H37Rv]
 gi|31794048|ref|NP_856541.1| hypothetical protein Mb2896 [Mycobacterium bovis AF2122/97]
 gi|121638753|ref|YP_978977.1| hypothetical protein BCG_2893 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 73 more sequence titles
 Length=85

 Score = 40.0 bits (92),  Expect = 0.13, Method: Compositional matrix adjust.
 Identities = 23/61 (38%), Positives = 29/61 (48%), Gaps = 3/61 (4%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAAS---QEDAFHGFE  57
           MRTT+ IDD++   VK +A R  RT   +L D  R+ L    PQ A     Q     G  
Sbjct  1   MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNPPKPQAAGRYRVQPSGKGGLR  60

Query  58  P  58
           P
Sbjct  61  P  61


>gi|254551940|ref|ZP_05142387.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=85

 Score = 39.7 bits (91),  Expect = 0.13, Method: Compositional matrix adjust.
 Identities = 23/61 (38%), Positives = 29/61 (48%), Gaps = 3/61 (4%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAAS---QEDAFHGFE  57
           MRTT+ IDD++   VK +A R  RT   +L D  R+ L    PQ A     Q     G  
Sbjct  1   MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNPPKPQAAGRYRVQPSGKGGMR  60

Query  58  P  58
           P
Sbjct  61  P  61


>gi|334319153|ref|YP_004551712.1| hypothetical protein Sinme_6079 [Sinorhizobium meliloti AK83]
 gi|333814848|gb|AEG07516.1| hypothetical protein SinmeB_6397 [Sinorhizobium meliloti BL225C]
 gi|334099580|gb|AEG57589.1| hypothetical protein Sinme_6079 [Sinorhizobium meliloti AK83]
Length=47

 Score = 39.3 bits (90),  Expect = 0.18, Method: Compositional matrix adjust.
 Identities = 21/45 (47%), Positives = 32/45 (72%), Gaps = 1/45 (2%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQP  45
           MRTTLSI+DDV +A +  A ++++  GE++S+LAR A T    +P
Sbjct  1   MRTTLSIEDDVRIAARAMATQQQQRIGEVISELAR-AFTEPAARP  44


>gi|336035908|gb|AEH81839.1| hypothetical protein SM11_pC0766 [Sinorhizobium meliloti SM11]
Length=54

 Score = 38.9 bits (89),  Expect = 0.23, Method: Compositional matrix adjust.
 Identities = 21/45 (47%), Positives = 32/45 (72%), Gaps = 1/45 (2%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQP  45
           MRTTLSI+DDV +A +  A ++++  GE++S+LAR A T    +P
Sbjct  8   MRTTLSIEDDVRIAARAMATQQQQRIGEVISELAR-AFTEPAARP  51


>gi|254364141|ref|ZP_04980187.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289554970|ref|ZP_06444180.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289744986|ref|ZP_06504364.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|134149655|gb|EBA41700.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289439602|gb|EFD22095.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289685514|gb|EFD53002.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|328459460|gb|AEB04883.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
Length=90

 Score = 38.1 bits (87),  Expect = 0.39, Method: Compositional matrix adjust.
 Identities = 29/84 (35%), Positives = 41/84 (49%), Gaps = 15/84 (17%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL++DDDV+  V++   RE+R   ++++D  R+AL      P   QE     +   P
Sbjct  5   MRTTLTLDDDVVRLVEDAVHRERRPMKQVINDALRRALA----PPVKRQEQ----YRLEP  56

Query  61  HRGGAVS-------NALIDRLRDE  77
           H     S       N L D L DE
Sbjct  57  HESAVRSGLDLAGFNKLADELEDE  80


>gi|15840686|ref|NP_335723.1| hypothetical protein MT1279 [Mycobacterium tuberculosis CDC1551]
 gi|13880873|gb|AAK45537.1| hypothetical protein MT1279 [Mycobacterium tuberculosis CDC1551]
Length=98

 Score = 38.1 bits (87),  Expect = 0.39, Method: Compositional matrix adjust.
 Identities = 29/84 (35%), Positives = 41/84 (49%), Gaps = 15/84 (17%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL++DDDV+  V++   RE+R   ++++D  R+AL      P   QE     +   P
Sbjct  13  MRTTLTLDDDVVRLVEDAVHRERRPMKQVINDALRRALA----PPVKRQEQ----YRLEP  64

Query  61  HRGGAVS-------NALIDRLRDE  77
           H     S       N L D L DE
Sbjct  65  HESAVRSGLDLAGFNKLADELEDE  88


>gi|15608381|ref|NP_215757.1| hypothetical protein Rv1241 [Mycobacterium tuberculosis H37Rv]
 gi|31792434|ref|NP_854927.1| hypothetical protein Mb1273 [Mycobacterium bovis AF2122/97]
 gi|121637170|ref|YP_977393.1| hypothetical protein BCG_1301 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 68 more sequence titles
 Length=86

 Score = 38.1 bits (87),  Expect = 0.41, Method: Compositional matrix adjust.
 Identities = 29/84 (35%), Positives = 41/84 (49%), Gaps = 15/84 (17%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL++DDDV+  V++   RE+R   ++++D  R+AL      P   QE     +   P
Sbjct  1   MRTTLTLDDDVVRLVEDAVHRERRPMKQVINDALRRALA----PPVKRQE----QYRLEP  52

Query  61  HRGGAVS-------NALIDRLRDE  77
           H     S       N L D L DE
Sbjct  53  HESAVRSGLDLAGFNKLADELEDE  76


>gi|240168913|ref|ZP_04747572.1| hypothetical protein MkanA1_06350 [Mycobacterium kansasii ATCC 
12478]
Length=93

 Score = 37.7 bits (86),  Expect = 0.50, Method: Compositional matrix adjust.
 Identities = 17/38 (45%), Positives = 27/38 (72%), Gaps = 0/38 (0%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL  38
           MRTTL++DDDV+  ++E   RE+R    +++D  R+AL
Sbjct  8   MRTTLTLDDDVVRLIEEAVHRERRPMKHVINDALRKAL  45


>gi|294054234|ref|YP_003547892.1| hypothetical protein Caka_0698 [Coraliomargarita akajimensis 
DSM 45221]
 gi|293613567|gb|ADE53722.1| conserved hypothetical protein [Coraliomargarita akajimensis 
DSM 45221]
Length=84

 Score = 37.4 bits (85),  Expect = 0.71, Method: Compositional matrix adjust.
 Identities = 25/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTT+ I D +L A+KERA  EKR   ++++D+  + L     Q    +   + G    P
Sbjct  1   MRTTIDIKDAILDALKERAHLEKRPMTKVVNDVLEKGLAAPTKQTKKVRLKTY-GLGIRP  59

Query  61  HRGGAVSNALIDRLRDEE  78
              G   N + D+L  E+
Sbjct  60  AFRGMSLNQVYDQLETED  77


>gi|157382509|gb|ABV48745.1| Rv2871 [Mycobacterium kansasii ATCC 12478]
Length=85

 Score = 36.2 bits (82),  Expect = 1.8, Method: Compositional matrix adjust.
 Identities = 22/49 (45%), Positives = 27/49 (56%), Gaps = 1/49 (2%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQ  49
           MRTT+ IDD++   VK RA R  RT   +L D  R  L N   Q AA +
Sbjct  1   MRTTIRIDDELYREVKARAARSGRTVAAVLEDAVRCGL-NPPGQSAAGR  48


>gi|33864608|ref|NP_896167.1| hypothetical protein SYNW0072 [Synechococcus sp. WH 8102]
 gi|33632131|emb|CAE06587.1| hypothetical protein SYNW0072 [Synechococcus sp. WH 8102]
Length=102

 Score = 35.8 bits (81),  Expect = 2.3, Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQAL--TNQNPQPAAS  48
           M+TT+ + D ++   K+RA ++KRT  ++++D  RQ L  T+ +  PAAS
Sbjct  1   MKTTIDLPDALIQQAKQRALQQKRTLKDLIADYIRQGLKGTSLSAMPAAS  50


>gi|330818819|ref|YP_004351036.1| hypothetical protein bgla_3p0110 [Burkholderia gladioli BSR3]
 gi|327374361|gb|AEA65713.1| hypothetical protein bgla_3p0110 [Burkholderia gladioli BSR3]
Length=73

 Score = 35.8 bits (81),  Expect = 2.3, Method: Compositional matrix adjust.
 Identities = 33/77 (43%), Positives = 42/77 (55%), Gaps = 6/77 (7%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTTL IDDDVL   + RA RE  + G I+S LAR AL        A+     +G   LP
Sbjct  1   MRTTLEIDDDVLALARARADREHVSIGRIISQLARAALQPA-----AAAPTTRNGLPVLP  55

Query  61  HRGGAVSNALIDRLRDE  77
                V+  L+++LRDE
Sbjct  56  S-ARTVTPELVNQLRDE  71


>gi|88810688|ref|ZP_01125945.1| hypothetical protein NB231_16448 [Nitrococcus mobilis Nb-231]
 gi|88792318|gb|EAR23428.1| hypothetical protein NB231_16448 [Nitrococcus mobilis Nb-231]
Length=92

 Score = 35.8 bits (81),  Expect = 2.4, Method: Compositional matrix adjust.
 Identities = 22/64 (35%), Positives = 35/64 (55%), Gaps = 6/64 (9%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           MRTT++++ DV   +KE A R + +  E L+D+ R+ LT+Q      ++      F   P
Sbjct  5   MRTTVTLEPDVAAKLKELAHRRRASFKETLNDVLRKGLTSQ------AKAGRSEPFVVKP  58

Query  61  HRGG  64
           H GG
Sbjct  59  HSGG  62


>gi|258593475|emb|CBE69814.1| conserved protein of unknown function [NC10 bacterium 'Dutch 
sediment']
Length=75

 Score = 34.3 bits (77),  Expect = 6.4, Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 9/60 (15%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQEDAFHGFEPLP  60
           M+TTL+IDD V++ +K  A R+ RT  E++    R  L  Q  +          G  PLP
Sbjct  1   MKTTLNIDDSVMVLLKREAARQGRTMSELVESALRLMLRAQRRR---------SGLPPLP  51


>gi|240171735|ref|ZP_04750394.1| hypothetical protein MkanA1_20645 [Mycobacterium kansasii ATCC 
12478]
Length=86

 Score = 34.3 bits (77),  Expect = 7.0, Method: Compositional matrix adjust.
 Identities = 21/49 (43%), Positives = 27/49 (56%), Gaps = 1/49 (2%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQ  49
           +RTT+ IDD++   VK RA R  RT   +L D  R  L N   Q AA +
Sbjct  2   VRTTIRIDDELYREVKARAARSGRTVAAVLEDAVRCGL-NPPGQSAAGR  49


>gi|15842141|ref|NP_337178.1| hypothetical protein MT2676 [Mycobacterium tuberculosis CDC1551]
 gi|31793786|ref|NP_856279.1| hypothetical protein Mb2633 [Mycobacterium bovis AF2122/97]
 gi|57117004|ref|YP_177673.1| hypothetical protein Rv2601A [Mycobacterium tuberculosis H37Rv]
 74 more sequence titles
 Length=95

 Score = 33.9 bits (76),  Expect = 8.0, Method: Compositional matrix adjust.
 Identities = 22/72 (31%), Positives = 38/72 (53%), Gaps = 12/72 (16%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQN-----PQPAASQEDAFHG  55
           M+TTL + D+++ A+K RA ++ R   +++++L R  L+  +     P P   Q      
Sbjct  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQ------  54

Query  56  FEPLPHRGGAVS  67
             PL H GGA +
Sbjct  55  -LPLVHCGGAAT  65


>gi|332321844|sp|P0CW33.1|VPB25_MYCTU RecName: Full=Antitoxin VapB25
Length=85

 Score = 33.5 bits (75),  Expect = 9.7, Method: Compositional matrix adjust.
 Identities = 21/61 (35%), Positives = 30/61 (50%), Gaps = 3/61 (4%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALT---NQNPQPAASQEDAFHGFE  57
           MRTT+SI D++L   K RAR   ++ G ++ D  R+ L        +P     DA  G  
Sbjct  1   MRTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGGARPTVPVFDAGTGPR  60

Query  58  P  58
           P
Sbjct  61  P  61


>gi|121636191|ref|YP_976414.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224988664|ref|YP_002643351.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|121491838|emb|CAL70300.1| Conserved hypothetical protein, antitoxin [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|224771777|dbj|BAH24583.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|341600207|emb|CCC62876.1| conserved hypothetical protein, antitoxin [Mycobacterium bovis 
BCG str. Moreau RDJ]
Length=85

 Score = 33.5 bits (75),  Expect = 9.7, Method: Compositional matrix adjust.
 Identities = 21/61 (35%), Positives = 30/61 (50%), Gaps = 3/61 (4%)

Query  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALT---NQNPQPAASQEDAFHGFE  57
           MRTT+SI D++L   K RAR   ++ G ++ D  R+ L        +P     DA  G  
Sbjct  1   MRTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGGARPTVPVFDAGTGPR  60

Query  58  P  58
           P
Sbjct  61  P  61



Lambda     K      H
   0.315    0.131    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128850890930


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40