BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3333c
Length=281
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610469|ref|NP_217850.1| hypothetical protein Rv3333c [Mycob... 547 8e-154
gi|340628318|ref|YP_004746770.1| hypothetical protein MCAN_33611... 545 3e-153
gi|344221174|gb|AEN01805.1| hypothetical protein MTCTRI2_3406 [M... 544 6e-153
gi|15842929|ref|NP_337966.1| hypothetical protein MT3437 [Mycoba... 514 4e-144
gi|289752034|ref|ZP_06511412.1| hypothetical proline rich protei... 503 1e-140
gi|289576059|ref|ZP_06456286.1| hypothetical proline rich protei... 501 4e-140
gi|289576060|ref|ZP_06456287.1| proline rich protein [Mycobacter... 402 3e-110
gi|254233945|ref|ZP_04927270.1| hypothetical proline rich protei... 387 1e-105
gi|183981433|ref|YP_001849724.1| hypothetical protein MMAR_1409 ... 238 7e-61
gi|240172590|ref|ZP_04751249.1| hypothetical protein MkanA1_2497... 206 3e-51
gi|183982555|ref|YP_001850846.1| hypothetical protein MMAR_2543 ... 204 1e-50
gi|296164302|ref|ZP_06846888.1| conserved hypothetical protein [... 199 5e-49
gi|183983548|ref|YP_001851839.1| hypothetical protein MMAR_3568 ... 149 3e-34
gi|342857262|ref|ZP_08713918.1| hypothetical protein MCOL_00250 ... 131 1e-28
gi|296168529|ref|ZP_06850334.1| conserved hypothetical protein [... 127 2e-27
gi|296167186|ref|ZP_06849593.1| conserved hypothetical protein [... 103 3e-20
>gi|15610469|ref|NP_217850.1| hypothetical protein Rv3333c [Mycobacterium tuberculosis H37Rv]
gi|31794518|ref|NP_857011.1| hypothetical protein Mb3366c [Mycobacterium bovis AF2122/97]
gi|121639261|ref|YP_979485.1| hypothetical protein BCG_3403c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
63 more sequence titles
Length=281
Score = 547 bits (1409), Expect = 8e-154, Method: Compositional matrix adjust.
Identities = 281/281 (100%), Positives = 281/281 (100%), Gaps = 0/281 (0%)
Query 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID
Sbjct 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
Query 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH 120
AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH
Sbjct 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH 120
Query 121 SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV 180
SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV
Sbjct 121 SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV 180
Query 181 LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGV 240
LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGV
Sbjct 181 LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGV 240
Query 241 PQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP 281
PQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP
Sbjct 241 PQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP 281
>gi|340628318|ref|YP_004746770.1| hypothetical protein MCAN_33611 [Mycobacterium canettii CIPT
140010059]
gi|340006508|emb|CCC45692.1| hypothetical proline rich protein [Mycobacterium canettii CIPT
140010059]
Length=281
Score = 545 bits (1404), Expect = 3e-153, Method: Compositional matrix adjust.
Identities = 280/281 (99%), Positives = 280/281 (99%), Gaps = 0/281 (0%)
Query 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID
Sbjct 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
Query 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH 120
AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH
Sbjct 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH 120
Query 121 SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV 180
SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMT MSPGWREPTGAMLASV
Sbjct 121 SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTTMSPGWREPTGAMLASV 180
Query 181 LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGV 240
LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGV
Sbjct 181 LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGV 240
Query 241 PQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP 281
PQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP
Sbjct 241 PQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP 281
>gi|344221174|gb|AEN01805.1| hypothetical protein MTCTRI2_3406 [Mycobacterium tuberculosis
CTRI-2]
Length=281
Score = 544 bits (1401), Expect = 6e-153, Method: Compositional matrix adjust.
Identities = 280/281 (99%), Positives = 280/281 (99%), Gaps = 0/281 (0%)
Query 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID
Sbjct 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
Query 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH 120
AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH
Sbjct 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH 120
Query 121 SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV 180
SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV
Sbjct 121 SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV 180
Query 181 LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGV 240
LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGV
Sbjct 181 LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGV 240
Query 241 PQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP 281
PQS GAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP
Sbjct 241 PQSRGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP 281
>gi|15842929|ref|NP_337966.1| hypothetical protein MT3437 [Mycobacterium tuberculosis CDC1551]
gi|254365956|ref|ZP_04982001.1| hypothetical proline rich protein [Mycobacterium tuberculosis
str. Haarlem]
gi|289759483|ref|ZP_06518861.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|13883264|gb|AAK47780.1| hypothetical protein MT3437 [Mycobacterium tuberculosis CDC1551]
gi|134151469|gb|EBA43514.1| hypothetical proline rich protein [Mycobacterium tuberculosis
str. Haarlem]
gi|289715047|gb|EFD79059.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=265
Score = 514 bits (1325), Expect = 4e-144, Method: Compositional matrix adjust.
Identities = 264/265 (99%), Positives = 265/265 (100%), Gaps = 0/265 (0%)
Query 17 VVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPVN 76
+VLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPVN
Sbjct 1 MVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPVN 60
Query 77 DIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEPGSNE 136
DIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEPGSNE
Sbjct 61 DIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEPGSNE 120
Query 137 PTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIPNPPP 196
PTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIPNPPP
Sbjct 121 PTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIPNPPP 180
Query 197 IPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGAGSGG 256
IPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGAGSGG
Sbjct 181 IPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGAGSGG 240
Query 257 GGGGDGPVEPSPARPMPPGFIRLAP 281
GGGGDGPVEPSPARPMPPGFIRLAP
Sbjct 241 GGGGDGPVEPSPARPMPPGFIRLAP 265
>gi|289752034|ref|ZP_06511412.1| hypothetical proline rich protein [Mycobacterium tuberculosis
T92]
gi|289692621|gb|EFD60050.1| hypothetical proline rich protein [Mycobacterium tuberculosis
T92]
Length=260
Score = 503 bits (1296), Expect = 1e-140, Method: Compositional matrix adjust.
Identities = 258/259 (99%), Positives = 258/259 (99%), Gaps = 0/259 (0%)
Query 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID
Sbjct 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
Query 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH 120
AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH
Sbjct 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH 120
Query 121 SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV 180
SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV
Sbjct 121 SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV 180
Query 181 LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGV 240
LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPP RPAPPQQPPPPPPEVEPPAGV
Sbjct 181 LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPRRPAPPQQPPPPPPEVEPPAGV 240
Query 241 PQSGGAAGSGGAGSGGGGG 259
PQSGGAAGSGGAGSGGGGG
Sbjct 241 PQSGGAAGSGGAGSGGGGG 259
>gi|289576059|ref|ZP_06456286.1| hypothetical proline rich protein [Mycobacterium tuberculosis
K85]
gi|289540490|gb|EFD45068.1| hypothetical proline rich protein [Mycobacterium tuberculosis
K85]
Length=257
Score = 501 bits (1290), Expect = 4e-140, Method: Compositional matrix adjust.
Identities = 256/257 (99%), Positives = 257/257 (100%), Gaps = 0/257 (0%)
Query 25 LHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPVNDIVDGLRN 84
+HDGPAAADPNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPVNDIVDGLRN
Sbjct 1 MHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPVNDIVDGLRN 60
Query 85 DAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEPGSNEPTHRVAAS 144
DAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEPGSNEPTHRVAAS
Sbjct 61 DAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEPGSNEPTHRVAAS 120
Query 145 TRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIPNPPPIPVPPPAA 204
TRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIPNPPPIPVPPPAA
Sbjct 121 TRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIPNPPPIPVPPPAA 180
Query 205 QTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGAGSGGGGGGDGPV 264
QTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGAGSGGGGGGDGPV
Sbjct 181 QTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGAGSGGGGGGDGPV 240
Query 265 EPSPARPMPPGFIRLAP 281
EPSPARPMPPGFIRLAP
Sbjct 241 EPSPARPMPPGFIRLAP 257
>gi|289576060|ref|ZP_06456287.1| proline rich protein [Mycobacterium tuberculosis K85]
gi|289540491|gb|EFD45069.1| proline rich protein [Mycobacterium tuberculosis K85]
Length=209
Score = 402 bits (1033), Expect = 3e-110, Method: Compositional matrix adjust.
Identities = 208/209 (99%), Positives = 208/209 (99%), Gaps = 0/209 (0%)
Query 73 MPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEP 132
MPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEP
Sbjct 1 MPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEP 60
Query 133 GSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIP 192
GSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIP
Sbjct 61 GSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIP 120
Query 193 NPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGA 252
NPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGA
Sbjct 121 NPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGA 180
Query 253 GSGGGGGGDGPVEPSPARPMPPGFIRLAP 281
GSGG GGGDGPVEPSPARPMPPGFIRLAP
Sbjct 181 GSGGAGGGDGPVEPSPARPMPPGFIRLAP 209
>gi|254233945|ref|ZP_04927270.1| hypothetical proline rich protein [Mycobacterium tuberculosis
C]
gi|124599474|gb|EAY58578.1| hypothetical proline rich protein [Mycobacterium tuberculosis
C]
Length=260
Score = 387 bits (994), Expect = 1e-105, Method: Compositional matrix adjust.
Identities = 206/207 (99%), Positives = 206/207 (99%), Gaps = 0/207 (0%)
Query 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID
Sbjct 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
Query 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH 120
AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFI AAVEIYCPNHH
Sbjct 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFIIAAVEIYCPNHH 120
Query 121 SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV 180
SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV
Sbjct 121 SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV 180
Query 181 LGAVRAGDPLIPNPPPIPVPPPAAQTL 207
LGAVRAGDPLIPNPPPIPVPPPAAQTL
Sbjct 181 LGAVRAGDPLIPNPPPIPVPPPAAQTL 207
>gi|183981433|ref|YP_001849724.1| hypothetical protein MMAR_1409 [Mycobacterium marinum M]
gi|183174759|gb|ACC39869.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=333
Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/175 (70%), Positives = 135/175 (78%), Gaps = 1/175 (0%)
Query 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
MFTGI SHA AL AA+VVL G AIL G AAAD NQDD+FLALL++ EIPAVANVPRVI
Sbjct 1 MFTGITSHAEALVAAIVVLTGTAILQSGAAAADSNQDDQFLALLDQNEIPAVANVPRVIA 60
Query 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH 120
AAHKVCRKLD GMP ND++DGLRNDAYNIDP+MR P RLTTTMTRFI+AAVEIYCPN+H
Sbjct 61 AAHKVCRKLDDGMPANDLLDGLRNDAYNIDPMMRQEPARLTTTMTRFITAAVEIYCPNNH 120
Query 121 SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRA-SVSDMTIMSPGWREPTG 174
SK+ AN PGSNEP H VAA T AV+ G ++R DM MS WR TG
Sbjct 121 SKIVSIKANPAPGSNEPRHPVAAYTHDAVSPGREVREPPALDMASMSTAWRASTG 175
>gi|240172590|ref|ZP_04751249.1| hypothetical protein MkanA1_24970 [Mycobacterium kansasii ATCC
12478]
Length=333
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/222 (57%), Positives = 143/222 (65%), Gaps = 31/222 (13%)
Query 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
MF+GI SH GAL A+VV+ G AIL G AAADPNQDD+FLALLEKKEIP ++NVPRVI
Sbjct 1 MFSGITSHVGALVTAVVVVTGTAILRGGAAAADPNQDDQFLALLEKKEIPVLSNVPRVIA 60
Query 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLY-PVRLTTTMTRFISAAVEIYCPNH 119
AAHKVCRKLDGGMPV+DIVDGLRNDAYN+DP + Y P R+T+TMTRF+ AAVEIYCP
Sbjct 61 AAHKVCRKLDGGMPVDDIVDGLRNDAYNMDPTLHQYPPRRVTSTMTRFVIAAVEIYCPYD 120
Query 120 HSKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRAS-VSDMTIMSPGWREPT----- 173
K+A A P SNEPT +A TR AVN G + + DMT M W EPT
Sbjct 121 RGKIASITATPAPQSNEPTRWIATYTRDAVNVGCQVLTTPALDMTNMPATWHEPTGVATT 180
Query 174 ------------------------GAMLASVLGAVRAGDPLI 191
GAMLAS+L AV GDP +
Sbjct 181 RLPLTDSGVAMAGRYGNRSAGNALGAMLASLLAAVPEGDPQL 222
>gi|183982555|ref|YP_001850846.1| hypothetical protein MMAR_2543 [Mycobacterium marinum M]
gi|183175881|gb|ACC40991.1| conserved hypothetical proline-rich protein [Mycobacterium marinum
M]
Length=367
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/177 (67%), Positives = 129/177 (73%), Gaps = 2/177 (1%)
Query 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
MF GI SHAGAL AA+ L G AIL DG AAA+PNQDD+FLALL+K EI AV NVP VI
Sbjct 1 MFAGITSHAGALVAAIAALAGTAILRDGAAAANPNQDDQFLALLDKNEISAVQNVPSVIA 60
Query 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH 120
AAHKVCRKLD GMP +VD LRNDAYNIDPVMRLYP RLTTTMTRF++ AV+IYCP+
Sbjct 61 AAHKVCRKLDSGMPAEALVDALRNDAYNIDPVMRLYPARLTTTMTRFVTVAVQIYCPHDQ 120
Query 121 SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRA--SVSDMTIMSPGWREPTGA 175
SK+A MAN PGS+EP AA AVNSGSD R S + M P W EPT A
Sbjct 121 SKIASIMANSAPGSDEPLSVGAAHRHGAVNSGSDRREPPPASGVINMLPVWHEPTAA 177
>gi|296164302|ref|ZP_06846888.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900364|gb|EFG79784.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=328
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/179 (61%), Positives = 131/179 (74%), Gaps = 5/179 (2%)
Query 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
MF GI +HAGAL A+VVL G+AI+ G AADP+QDD+FLALL KKEIPA NVP +I
Sbjct 1 MFAGITNHAGALVTAIVVLAGSAIVGAGTVAADPDQDDQFLALLVKKEIPARRNVPSLIA 60
Query 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLY-PVRLTTTMTRFISAAVEIYCPNH 119
AHKVCRKLDGGMPV+D+VD +RN A+N+DP R Y P RLT T+TRF++AAVE YCP +
Sbjct 61 TAHKVCRKLDGGMPVDDVVDLMRNTAFNVDPPERQYPPERLTRTLTRFVTAAVEAYCPYN 120
Query 120 HSKMA--FAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASV--SDMTIMSPGWREPTG 174
K+A AMA+ PGSNEPTHRVAAST + VNS S R + D+ M +EPTG
Sbjct 121 QQKIASITAMASPAPGSNEPTHRVAASTLNTVNSASGPREPLPRLDIINMQATRKEPTG 179
>gi|183983548|ref|YP_001851839.1| hypothetical protein MMAR_3568 [Mycobacterium marinum M]
gi|183176874|gb|ACC41984.1| conserved hypothetical proline-rich protein [Mycobacterium marinum
M]
Length=349
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/156 (50%), Positives = 102/156 (66%), Gaps = 1/156 (0%)
Query 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
M TG A+ AGA+ A V+L GAAIL AAADPNQDD+FLA L++ IPA+ N P +I
Sbjct 50 MITGTATRAGAVATATVILFGAAILRGNSAAADPNQDDQFLAALDQNGIPALENAPSLIV 109
Query 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPV-RLTTTMTRFISAAVEIYCPNH 119
AH+VC KLDGGMP + +V+ + N A N + + P RLT T TRF++AAV+ YCP +
Sbjct 110 TAHEVCSKLDGGMPADGVVESMTNFAVNNNSGLSRIPRDRLTRTFTRFVAAAVQAYCPTN 169
Query 120 HSKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDL 155
K+A + PGSN THR AA + + V +G D+
Sbjct 170 QDKLASFRTSPTPGSNGTTHRAAAYSHNIVRTGCDV 205
>gi|342857262|ref|ZP_08713918.1| hypothetical protein MCOL_00250 [Mycobacterium colombiense CECT
3035]
gi|342134595|gb|EGT87761.1| hypothetical protein MCOL_00250 [Mycobacterium colombiense CECT
3035]
Length=277
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/147 (49%), Positives = 89/147 (61%), Gaps = 9/147 (6%)
Query 1 MFTGIAS--------HAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAV 52
MFTGI H G L A++VL GAAIL G AAADPNQDD+FLALL+++ IPA+
Sbjct 1 MFTGITRSTGITSHGHLGTLATAILVLTGAAILRGGAAAADPNQDDQFLALLDQEGIPAL 60
Query 53 ANVPRVIDAAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLY-PVRLTTTMTRFISAA 111
VP +ID AHKVCR +D G + +VD + AY+ DP R Y P RL T RF++A+
Sbjct 61 EGVPYLIDTAHKVCRAVDAGFSADAVVDAMVQFAYSQDPAERNYAPGRLARTEARFVTAS 120
Query 112 VEIYCPNHHSKMAFAMANFEPGSNEPT 138
VE YCP K+A N N PT
Sbjct 121 VEAYCPYDRGKIASLAVNPASAWNVPT 147
>gi|296168529|ref|ZP_06850334.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896671|gb|EFG76309.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=254
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/139 (50%), Positives = 92/139 (67%), Gaps = 3/139 (2%)
Query 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
M T AGAL +VVL G +L G AAADPN DD+F+ALL++K IPA+ NVP +I
Sbjct 19 MLTSTTHRAGALVTVIVVLTGVVMLPHGAAAADPNPDDQFVALLDQKGIPALENVPSLIA 78
Query 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLY-PVRLTTTMTRFISAAVEIYCPNH 119
AH++CR+LDGGMP + +VD +R A+N + Y P R+ T+ RFISAAVE YCPN+
Sbjct 79 TAHRICRQLDGGMPADAVVDDMRQRAFNANGAGGPYPPDRVYRTVARFISAAVEAYCPNN 138
Query 120 HSKMAF--AMANFEPGSNE 136
K+A +A PGS++
Sbjct 139 QPKIASLEGVAFRAPGSSD 157
>gi|296167186|ref|ZP_06849593.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897508|gb|EFG77107.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=237
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/128 (54%), Positives = 88/128 (69%), Gaps = 1/128 (0%)
Query 1 MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID 60
MFTGI AL A+L +L G A++ G AAADP+QD++F ALL + IPA+ +P +I
Sbjct 1 MFTGITRPGSALIASLALLTGGAVVRVGAAAADPSQDEQFSALLTAEGIPALEGMPTLIS 60
Query 61 AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYP-VRLTTTMTRFISAAVEIYCPNH 119
AHKVCR LD G+ V+ +VD + N+AY DPV RLYP RLT TMTRFI+A+VE YCP
Sbjct 61 TAHKVCRVLDKGISVDTMVDAMLNNAYTQDPVERLYPRTRLTRTMTRFITASVEAYCPRD 120
Query 120 HSKMAFAM 127
K+A M
Sbjct 121 EGKIASIM 128
Lambda K H
0.315 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 445900241072
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40