BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3334
Length=146
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610470|ref|NP_217851.1| MerR family transcriptional regulat... 299 9e-80
gi|340628319|ref|YP_004746771.1| putative transcriptional regula... 298 2e-79
gi|296164288|ref|ZP_06846874.1| MerR family transcriptional regu... 243 8e-63
gi|296165053|ref|ZP_06847607.1| MerR family transcriptional regu... 238 3e-61
gi|77454715|ref|YP_345583.1| MerR family transcriptional regulat... 150 8e-35
gi|229493314|ref|ZP_04387105.1| transcriptional regulator, MerR ... 147 4e-34
gi|33867189|ref|NP_898747.1| MerR family regulator [Rhodococcus ... 145 2e-33
gi|119714247|ref|YP_919389.1| regulatory protein, MerR [Nocardio... 133 8e-30
gi|295394920|ref|ZP_06805133.1| MerR family transcriptional regu... 132 2e-29
gi|296119135|ref|ZP_06837706.1| transcriptional regulator, MerR ... 132 2e-29
gi|295395762|ref|ZP_06805950.1| MerR family transcriptional regu... 131 3e-29
gi|311743818|ref|ZP_07717624.1| MerR family transcriptional regu... 131 3e-29
gi|227549494|ref|ZP_03979543.1| MerR family transcriptional regu... 131 3e-29
gi|239917147|ref|YP_002956705.1| transcriptional regulator [Micr... 131 3e-29
gi|343926428|ref|ZP_08765933.1| putative MerR family transcripti... 131 4e-29
gi|145294207|ref|YP_001137028.1| hypothetical protein cgR_0164 [... 130 5e-29
gi|289704708|ref|ZP_06501132.1| transcriptional regulator, MerR ... 130 5e-29
gi|227548155|ref|ZP_03978204.1| MerR family transcriptional regu... 130 6e-29
gi|256826328|ref|YP_003150288.1| transcriptional regulator [Kyto... 130 7e-29
gi|311741727|ref|ZP_07715549.1| MerR family transcriptional regu... 130 9e-29
gi|68536527|ref|YP_251232.1| MerR family transcriptional regulat... 129 1e-28
gi|309813301|ref|ZP_07707014.1| transcriptional regulator, MerR ... 129 2e-28
gi|172040313|ref|YP_001800027.1| MerR family transcriptional reg... 129 2e-28
gi|219883275|ref|YP_002478436.1| transcriptional regulator, MerR... 129 2e-28
gi|325965373|ref|YP_004243278.1| MerR family transcriptional reg... 126 9e-28
gi|116670334|ref|YP_831267.1| MerR family transcriptional regula... 126 1e-27
gi|326331455|ref|ZP_08197745.1| Cd(II)/Pb(II)-responsive transcr... 125 1e-27
gi|116662160|ref|YP_829215.1| MerR family transcriptional regula... 125 3e-27
gi|319947649|ref|ZP_08021870.1| putative transcriptional regulat... 123 9e-27
gi|325066717|ref|ZP_08125390.1| putative transcriptional regulat... 123 9e-27
gi|332672148|ref|YP_004455156.1| MerR family transcriptional reg... 123 1e-26
gi|119715881|ref|YP_922846.1| MerR family transcriptional regula... 118 3e-25
gi|88855153|ref|ZP_01129818.1| putative transcriptional regulato... 114 7e-24
gi|88856549|ref|ZP_01131206.1| putative transcriptional regulato... 113 1e-23
gi|119952468|ref|YP_950109.1| MerR family transcriptional regula... 112 2e-23
gi|119489599|ref|ZP_01622359.1| Transcriptional Regulator, MerR ... 111 4e-23
gi|86608567|ref|YP_477329.1| MerR family transcriptional regulat... 110 5e-23
gi|209525139|ref|ZP_03273683.1| transcriptional regulator, MerR ... 110 5e-23
gi|84496051|ref|ZP_00994905.1| putative transcriptional regulato... 110 6e-23
gi|294631661|ref|ZP_06710221.1| Cd(II)/Pb(II)-responsive transcr... 110 7e-23
gi|227503931|ref|ZP_03933980.1| MerR family transcriptional regu... 108 3e-22
gi|334117896|ref|ZP_08491987.1| transcriptional regulator, MerR ... 108 3e-22
gi|145223799|ref|YP_001134477.1| MerR family transcriptional reg... 107 8e-22
gi|292491738|ref|YP_003527177.1| transcription regulator MerR DN... 106 1e-21
gi|219883294|ref|YP_002478455.1| transcriptional regulator, MerR... 105 2e-21
gi|86606208|ref|YP_474971.1| MerR family transcriptional regulat... 105 3e-21
gi|220908114|ref|YP_002483425.1| MerR family transcriptional reg... 104 4e-21
gi|269839487|ref|YP_003324179.1| MerR family transcriptional reg... 102 2e-20
gi|325001064|ref|ZP_08122176.1| putative transcriptional regulat... 102 3e-20
gi|329940437|ref|ZP_08289718.1| MerR family transcriptional regu... 101 4e-20
>gi|15610470|ref|NP_217851.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
H37Rv]
gi|15842931|ref|NP_337968.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|31794519|ref|NP_857012.1| MerR family transcriptional regulator [Mycobacterium bovis AF2122/97]
80 more sequence titles
gi|121639263|ref|YP_979487.1| MerR family transcriptional regulator [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|148663198|ref|YP_001284721.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
gi|148824540|ref|YP_001289294.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
F11]
gi|167967104|ref|ZP_02549381.1| hypothetical transcriptional regulatory protein, merR-family
[Mycobacterium tuberculosis H37Ra]
gi|224991760|ref|YP_002646449.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253800380|ref|YP_003033381.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
KZN 1435]
gi|254233946|ref|ZP_04927271.1| hypothetical protein TBCG_03279 [Mycobacterium tuberculosis C]
gi|254365958|ref|ZP_04982003.1| hypothetical transcriptional regulatory protein (probably merR-family)
[Mycobacterium tuberculosis str. Haarlem]
gi|254552442|ref|ZP_05142889.1| transcriptional regulator, merR-family protein [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|289445015|ref|ZP_06434759.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
T46]
gi|289449027|ref|ZP_06438771.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
CPHL_A]
gi|289555614|ref|ZP_06444824.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
KZN 605]
gi|289571566|ref|ZP_06451793.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
T17]
gi|289576061|ref|ZP_06456288.1| transcriptional regulator [Mycobacterium tuberculosis K85]
gi|289576062|ref|ZP_06456289.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
K85]
gi|289747155|ref|ZP_06506533.1| transcriptional regulator [Mycobacterium tuberculosis 02_1987]
gi|289752035|ref|ZP_06511413.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
T92]
gi|289755460|ref|ZP_06514838.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
EAS054]
gi|289759484|ref|ZP_06518862.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
T85]
gi|289763526|ref|ZP_06522904.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
GM 1503]
gi|294995897|ref|ZP_06801588.1| transcriptional regulator, merR-family protein [Mycobacterium
tuberculosis 210]
gi|297635992|ref|ZP_06953772.1| transcriptional regulator, merR-family protein [Mycobacterium
tuberculosis KZN 4207]
gi|297732989|ref|ZP_06962107.1| transcriptional regulator, merR-family protein [Mycobacterium
tuberculosis KZN R506]
gi|298526812|ref|ZP_07014221.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|306777666|ref|ZP_07416003.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu001]
gi|306782392|ref|ZP_07420729.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu002]
gi|306786214|ref|ZP_07424536.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu003]
gi|306790582|ref|ZP_07428904.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu004]
gi|306795106|ref|ZP_07433408.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu005]
gi|306799301|ref|ZP_07437603.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu006]
gi|306805148|ref|ZP_07441816.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu008]
gi|306809336|ref|ZP_07446004.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu007]
gi|306969440|ref|ZP_07482101.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu009]
gi|306973786|ref|ZP_07486447.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu010]
gi|307081496|ref|ZP_07490666.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu011]
gi|307086103|ref|ZP_07495216.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu012]
gi|313660321|ref|ZP_07817201.1| transcriptional regulator, merR-family protein [Mycobacterium
tuberculosis KZN V2475]
gi|339633346|ref|YP_004724988.1| transcriptional regulator (probably MERR-family) [Mycobacterium
africanum GM041182]
gi|2894244|emb|CAA17106.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY MERR-FAMILY)
[Mycobacterium tuberculosis H37Rv]
gi|13883266|gb|AAK47782.1| transcriptional regulator, MerR family [Mycobacterium tuberculosis
CDC1551]
gi|31620115|emb|CAD95484.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY MERR-FAMILY)
[Mycobacterium bovis AF2122/97]
gi|121494911|emb|CAL73394.1| Probable transcriptional regulatory protein (probably merR-family)
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124599475|gb|EAY58579.1| hypothetical protein TBCG_03279 [Mycobacterium tuberculosis C]
gi|134151471|gb|EBA43516.1| hypothetical transcriptional regulatory protein (probably merR-family)
[Mycobacterium tuberculosis str. Haarlem]
gi|148507350|gb|ABQ75159.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
H37Ra]
gi|148723067|gb|ABR07692.1| hypothetical transcriptional regulatory protein, merR-family
[Mycobacterium tuberculosis F11]
gi|224774875|dbj|BAH27681.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253321883|gb|ACT26486.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
KZN 1435]
gi|289417934|gb|EFD15174.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
T46]
gi|289421985|gb|EFD19186.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
CPHL_A]
gi|289440246|gb|EFD22739.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
KZN 605]
gi|289540492|gb|EFD45070.1| transcriptional regulator [Mycobacterium tuberculosis K85]
gi|289540493|gb|EFD45071.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
K85]
gi|289545320|gb|EFD48968.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
T17]
gi|289687683|gb|EFD55171.1| transcriptional regulator [Mycobacterium tuberculosis 02_1987]
gi|289692622|gb|EFD60051.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
T92]
gi|289696047|gb|EFD63476.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
EAS054]
gi|289711032|gb|EFD75048.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
GM 1503]
gi|289715048|gb|EFD79060.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
T85]
gi|298496606|gb|EFI31900.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|308214002|gb|EFO73401.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu001]
gi|308324941|gb|EFP13792.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu002]
gi|308329173|gb|EFP18024.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu003]
gi|308333006|gb|EFP21857.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu004]
gi|308336628|gb|EFP25479.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu005]
gi|308340493|gb|EFP29344.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu006]
gi|308344364|gb|EFP33215.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu007]
gi|308348302|gb|EFP37153.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu008]
gi|308353026|gb|EFP41877.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu009]
gi|308356863|gb|EFP45714.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu010]
gi|308360819|gb|EFP49670.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu011]
gi|308364425|gb|EFP53276.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
SUMu012]
gi|323718007|gb|EGB27190.1| transcriptional regulator [Mycobacterium tuberculosis CDC1551A]
gi|326905176|gb|EGE52109.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
W-148]
gi|328460113|gb|AEB05536.1| transcriptional regulator, merR-family [Mycobacterium tuberculosis
KZN 4207]
gi|339296162|gb|AEJ48273.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
CCDC5079]
gi|339299770|gb|AEJ51880.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
CCDC5180]
gi|339332702|emb|CCC28420.1| putative transcriptional regulatory protein (probably MERR-family)
[Mycobacterium africanum GM041182]
gi|341603288|emb|CCC65966.1| probable transcriptional regulatory protein (probably merR-family)
[Mycobacterium bovis BCG str. Moreau RDJ]
gi|344221175|gb|AEN01806.1| MerR family transcriptional regulator [Mycobacterium tuberculosis
CTRI-2]
Length=146
Score = 299 bits (766), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 146/146 (100%), Positives = 146/146 (100%), Gaps = 0/146 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL
Sbjct 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH
Sbjct 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
Query 121 DHSTVCWILESDLDEPTAIEVSDIHA 146
DHSTVCWILESDLDEPTAIEVSDIHA
Sbjct 121 DHSTVCWILESDLDEPTAIEVSDIHA 146
>gi|340628319|ref|YP_004746771.1| putative transcriptional regulatory protein [Mycobacterium canettii
CIPT 140010059]
gi|340006509|emb|CCC45693.1| putative transcriptional regulatory protein (probably MERR-family)
[Mycobacterium canettii CIPT 140010059]
Length=146
Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/146 (99%), Positives = 145/146 (99%), Gaps = 0/146 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGL L
Sbjct 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH
Sbjct 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
Query 121 DHSTVCWILESDLDEPTAIEVSDIHA 146
DHSTVCWILESDLDEPTAIEVSDIHA
Sbjct 121 DHSTVCWILESDLDEPTAIEVSDIHA 146
>gi|296164288|ref|ZP_06846874.1| MerR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900350|gb|EFG79770.1| MerR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=155
Score = 243 bits (619), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 114/143 (80%), Positives = 130/143 (91%), Gaps = 0/143 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
MKI E+A LTNT+TKT+RFYE+ GLLPPPAR+ASGYR+YGPEIVDRLRFIHRGQAAGL L
Sbjct 10 MKIGELAKLTNTTTKTIRFYEDLGLLPPPARSASGYRDYGPEIVDRLRFIHRGQAAGLTL 69
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
Q+VRQILAIHDRGEAPC HVRQ+L +R+DEVRAQIAEL+ALEGHLQTLLDHAS+ PTEH
Sbjct 70 QKVRQILAIHDRGEAPCGHVRQVLHSRLDEVRAQIAELVALEGHLQTLLDHASHHAPTEH 129
Query 121 DHSTVCWILESDLDEPTAIEVSD 143
DHS VCWILE+DL P + E++D
Sbjct 130 DHSMVCWILENDLGVPASDELAD 152
>gi|296165053|ref|ZP_06847607.1| MerR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899585|gb|EFG79037.1| MerR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=143
Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 109/134 (82%), Positives = 124/134 (93%), Gaps = 0/134 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A L+NTS KT+RFYEN+GLLPPPARTASGYR+YGPE+VDRLRFIHRGQAAGL L
Sbjct 1 MQIGELAKLSNTSAKTIRFYENAGLLPPPARTASGYRDYGPEVVDRLRFIHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
Q+VRQILAIHDRGE PC HV+Q+L TR+D+VRAQIAEL+ALEGHLQTLLDHA++ PTEH
Sbjct 61 QKVRQILAIHDRGEVPCGHVQQVLHTRLDQVRAQIAELVALEGHLQTLLDHAAHAAPTEH 120
Query 121 DHSTVCWILESDLD 134
D STVCWILESDLD
Sbjct 121 DQSTVCWILESDLD 134
>gi|77454715|ref|YP_345583.1| MerR family transcriptional regulator [Rhodococcus erythropolis
PR4]
gi|77019715|dbj|BAE46091.1| putative MerR family transcriptional regulator [Rhodococcus erythropolis
PR4]
Length=140
Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 70/132 (54%), Positives = 92/132 (70%), Gaps = 0/132 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
MKI E+AA + + KTLRFYE+SG++P P R ++GYR++GPE + RLRF+ Q+AGL L
Sbjct 1 MKIGELAARSGVAPKTLRFYEDSGVIPVPVRKSNGYRDFGPESLSRLRFVRSAQSAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
+E+RQIL HDRG APC V ++LS + +VR +I EL LE +L LL A G P E
Sbjct 61 REIRQILTTHDRGAAPCEQVVEMLSEHLSQVRGKIRELATLETNLVALLGRAESGIPPET 120
Query 121 DHSTVCWILESD 132
D VCWILES+
Sbjct 121 DDVGVCWILESE 132
>gi|229493314|ref|ZP_04387105.1| transcriptional regulator, MerR family [Rhodococcus erythropolis
SK121]
gi|229319816|gb|EEN85646.1| transcriptional regulator, MerR family [Rhodococcus erythropolis
SK121]
Length=152
Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/132 (53%), Positives = 92/132 (70%), Gaps = 0/132 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
+KI E+AA + + KTLRFYE+SG++P P R ++GYR++GPE + RLRF+ Q+AGL L
Sbjct 13 VKIGELAARSGVAPKTLRFYEDSGVIPVPVRKSNGYRDFGPESLSRLRFVRSAQSAGLTL 72
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
+E+RQIL HDRG APC V ++LS + +VR +I EL LE +L LL A G P E
Sbjct 73 REIRQILTTHDRGAAPCEQVVEMLSEHLSQVRGKIRELATLETNLVALLGRAESGIPPET 132
Query 121 DHSTVCWILESD 132
D VCWILES+
Sbjct 133 DDVGVCWILESE 144
>gi|33867189|ref|NP_898747.1| MerR family regulator [Rhodococcus erythropolis]
gi|33669023|gb|AAP74017.1| putative MerR-family regulator [Rhodococcus erythropolis]
Length=152
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 93/138 (68%), Gaps = 0/138 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
+KI E+AA + + KTLRFYE+SG++P P R ++GYR+YGPE + RLRF+ Q+AG L
Sbjct 13 VKIGELAARSGVAPKTLRFYEDSGVIPVPVRKSNGYRDYGPESLARLRFVRSAQSAGFTL 72
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
+E+R+IL HDRG APC V ++LS + +VR +I EL LE +L LL A P+E
Sbjct 73 REIREILTTHDRGAAPCEQVVEMLSEHLSQVRGKIRELATLETNLVALLSRAEGEIPSEA 132
Query 121 DHSTVCWILESDLDEPTA 138
D VCWILES+ E A
Sbjct 133 DDVGVCWILESESQEGVA 150
>gi|119714247|ref|YP_919389.1| regulatory protein, MerR [Nocardioides sp. JS614]
gi|119526156|gb|ABL79526.1| regulatory protein, MerR [Nocardioides sp. JS614]
Length=129
Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/129 (52%), Positives = 83/129 (65%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+TKTLRFYE+ GLLP RT SGYR+Y P+ + RL FIHRGQAAGL L
Sbjct 1 MRIGELAHAAGTTTKTLRFYEDQGLLPAAERTPSGYRDYTPDALARLDFIHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G PC HV LL R+ ++ AQIA+L+AL L L D A++ P
Sbjct 61 AQIRQILGIRDSGTPPCGHVHDLLDERLTDLDAQIAQLVALRASLAELRDQAAHADPDAC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 PADQVCRYL 129
>gi|295394920|ref|ZP_06805133.1| MerR family transcriptional regulator [Brevibacterium mcbrellneri
ATCC 49030]
gi|294972253|gb|EFG48115.1| MerR family transcriptional regulator [Brevibacterium mcbrellneri
ATCC 49030]
Length=152
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/129 (50%), Positives = 83/129 (65%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+ KTLRFYE GLLP RTASGYR+Y PE R+ FIHRGQAAGL L
Sbjct 24 MRIGELAEAAGTTAKTLRFYEEQGLLPAAERTASGYRDYDPEAATRIDFIHRGQAAGLTL 83
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
+++QIL I D GE PC HVR LL R+ ++ QI++L++L ++ L D A+ P
Sbjct 84 AQIKQILDIRDGGEIPCGHVRDLLDVRLKDIERQISDLVSLRDNVAALRDAAAEPEPETC 143
Query 121 DHSTVCWIL 129
+ VC L
Sbjct 144 NADEVCRYL 152
>gi|296119135|ref|ZP_06837706.1| transcriptional regulator, MerR family [Corynebacterium ammoniagenes
DSM 20306]
gi|295967856|gb|EFG81110.1| transcriptional regulator, MerR family [Corynebacterium ammoniagenes
DSM 20306]
Length=129
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/129 (52%), Positives = 81/129 (63%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+ KTLRFYE GLLPP RT SGYR+Y PE V R+ F+HRGQAAGL L
Sbjct 1 MRIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPETVARIDFVHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G+APC HVR LL R+ E+ QIA+L L + L A++ P
Sbjct 61 AQIRQILDIRDGGQAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 STDQVCRYL 129
>gi|295395762|ref|ZP_06805950.1| MerR family transcriptional regulator [Brevibacterium mcbrellneri
ATCC 49030]
gi|294971297|gb|EFG47184.1| MerR family transcriptional regulator [Brevibacterium mcbrellneri
ATCC 49030]
Length=129
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/129 (52%), Positives = 81/129 (63%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+ KTLRFYE GLLPP RT SGYR+Y PE+V R+ F+HRGQAAGL L
Sbjct 1 MRIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPEMVARIDFVHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G APC HVR LL R+ E+ QIA+L L + L A++ P
Sbjct 61 AQIRQILDIRDGGHAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 STDQVCRYL 129
>gi|311743818|ref|ZP_07717624.1| MerR family transcriptional regulator [Aeromicrobium marinum
DSM 15272]
gi|311312948|gb|EFQ82859.1| MerR family transcriptional regulator [Aeromicrobium marinum
DSM 15272]
Length=152
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/129 (51%), Positives = 86/129 (67%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+TKTLRFYE+ GLLP RT +GYR+Y P+ V R+ F+HRGQAAGL L
Sbjct 24 MRIGELAEAAGTTTKTLRFYEDQGLLPTAERTPAGYRDYTPDAVSRIDFVHRGQAAGLTL 83
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
+++QIL I D G+APC HVR LL+ R+ ++ QIA+L AL ++ +L D AS P
Sbjct 84 AQIKQILDIRDHGQAPCGHVRGLLAARLADIDRQIADLGALRDNVASLRDAASDPEPDTC 143
Query 121 DHSTVCWIL 129
VC L
Sbjct 144 GADEVCRYL 152
>gi|227549494|ref|ZP_03979543.1| MerR family transcriptional regulator [Corynebacterium lipophiloflavum
DSM 44291]
gi|227078426|gb|EEI16389.1| MerR family transcriptional regulator [Corynebacterium lipophiloflavum
DSM 44291]
Length=129
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/129 (52%), Positives = 82/129 (64%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I ++A T T+TKTLRFYE SGLLPP R ASGYR+Y V R+ FIHRGQAAGL L
Sbjct 1 MRIGQLAEATGTTTKTLRFYEESGLLPPAERLASGYRDYAENAVGRVGFIHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G+APC HVR LL R+ E+ QIA+L L + L A++ P
Sbjct 61 AQIRQILDIRDGGQAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 STDQVCRYL 129
>gi|239917147|ref|YP_002956705.1| transcriptional regulator [Micrococcus luteus NCTC 2665]
gi|281414384|ref|ZP_06246126.1| predicted transcriptional regulator [Micrococcus luteus NCTC
2665]
gi|239838354|gb|ACS30151.1| predicted transcriptional regulator [Micrococcus luteus NCTC
2665]
Length=129
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/129 (52%), Positives = 79/129 (62%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+ KTLRFYE GLLPP RT SGYR+Y PE R+ F+HRGQAAGL L
Sbjct 1 MRIGELAERAGTTAKTLRFYEEQGLLPPAERTPSGYRDYAPETAARIDFVHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G APC HVR LL R+ E+ QIA+L AL + L A+ P
Sbjct 61 AQIRQILDIRDDGAAPCEHVRDLLDARLAEIEQQIAQLAALRDTITELRRDAAQPDPDSC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 SADQVCRYL 129
>gi|343926428|ref|ZP_08765933.1| putative MerR family transcriptional regulator [Gordonia alkanivorans
NBRC 16433]
gi|343763666|dbj|GAA12859.1| putative MerR family transcriptional regulator [Gordonia alkanivorans
NBRC 16433]
Length=129
Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/129 (52%), Positives = 80/129 (63%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+ KTLRFYE GLLPP RT SGYR+Y PE V R+ F+HRGQAAGL L
Sbjct 1 MRIGELAERAGTTAKTLRFYEGQGLLPPAERTQSGYRDYAPETVARIDFVHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G APC HVR LL R+ E+ QIA+L L + L A++ P
Sbjct 61 AQIRQILDIRDGGHAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 STDQVCRYL 129
>gi|145294207|ref|YP_001137028.1| hypothetical protein cgR_0164 [Corynebacterium glutamicum R]
gi|57158021|dbj|BAD83995.1| transcriptional regulator MerR family [Corynebacterium glutamicum]
gi|140844127|dbj|BAF53126.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344043321|gb|EGV39019.1| hypothetical protein CgS9114_15258 [Corynebacterium glutamicum
S9114]
Length=129
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/129 (52%), Positives = 80/129 (63%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+ KTLRFYE GLLPP RT SGYR+Y PE V R+ F+HRGQAAGL L
Sbjct 1 MRIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPETVARIDFVHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G APC HVR LL R+ E+ QIA+L L + L A++ P
Sbjct 61 AQIRQILDIRDGGHAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 STDQVCRYL 129
>gi|289704708|ref|ZP_06501132.1| transcriptional regulator, MerR family [Micrococcus luteus SK58]
gi|289558569|gb|EFD51836.1| transcriptional regulator, MerR family [Micrococcus luteus SK58]
Length=129
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/129 (51%), Positives = 84/129 (66%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I EVA + T++KTLR+YE GLLP RT +GYR+YG E++DRL FI RGQAAGL L
Sbjct 1 MRIGEVARASGTTSKTLRYYEEVGLLPAADRTPAGYRDYGAEVLDRLDFIRRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++ Q+L I DRG+APC HV LL TR+D + Q+AEL L + L + A+ G P
Sbjct 61 AQIGQVLDIRDRGQAPCRHVTHLLDTRLDVIDRQLAELAQLRTTIADLREDAAAGDPATC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 SPEDVCRYL 129
>gi|227548155|ref|ZP_03978204.1| MerR family transcriptional regulator [Corynebacterium lipophiloflavum
DSM 44291]
gi|227079716|gb|EEI17679.1| MerR family transcriptional regulator [Corynebacterium lipophiloflavum
DSM 44291]
Length=129
Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/129 (52%), Positives = 80/129 (63%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+ KTLRFYE GLLPP RT SGYR+Y PE V R+ F+HRGQAAGL L
Sbjct 1 MRIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPETVARIDFVHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G APC HVR LL R+ E+ QIA+L L + L A++ P
Sbjct 61 AQIRQILDIRDGGHAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 SPDQVCRYL 129
>gi|256826328|ref|YP_003150288.1| transcriptional regulator [Kytococcus sedentarius DSM 20547]
gi|256689721|gb|ACV07523.1| predicted transcriptional regulator [Kytococcus sedentarius DSM
20547]
Length=129
Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/129 (52%), Positives = 79/129 (62%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+ KTLRFYE GLLPP RT SGYR+Y PE R+ F+HRGQAAGL L
Sbjct 1 MRIGELAERAGTTAKTLRFYEEQGLLPPAERTPSGYRDYAPETAARIDFVHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G APC HVR LL R+ E+ QIA+L AL + L A+ P
Sbjct 61 AQIRQILDIRDGGAAPCEHVRDLLDARLAEIEQQIAQLTALRDTIAELRHDAAQPDPDSC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 SADQVCRYL 129
>gi|311741727|ref|ZP_07715549.1| MerR family transcriptional regulator [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303248|gb|EFQ79329.1| MerR family transcriptional regulator [Corynebacterium pseudogenitalium
ATCC 33035]
Length=144
Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/126 (52%), Positives = 81/126 (65%), Gaps = 0/126 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I ++A T T+TKTLRFYE SGLLPP R ASGYR+Y + V R+ FIHRGQAAGL L
Sbjct 16 MRIGQLAEATGTTTKTLRFYEESGLLPPAERLASGYRDYAEDAVGRVGFIHRGQAAGLTL 75
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G+APC HVR LL R+ E+ QI +L L + L A++ P
Sbjct 76 AQIRQILDIRDGGQAPCEHVRDLLDVRLAEIEQQITQLSVLRDTIADLRQDAAHPDPETC 135
Query 121 DHSTVC 126
VC
Sbjct 136 STDQVC 141
>gi|68536527|ref|YP_251232.1| MerR family transcriptional regulator [Corynebacterium jeikeium
K411]
gi|260577663|ref|ZP_05845599.1| MerR family transcriptional regulator [Corynebacterium jeikeium
ATCC 43734]
gi|68264126|emb|CAI37614.1| putative transcriptional regulator (MerR family) [Corynebacterium
jeikeium K411]
gi|258604209|gb|EEW17450.1| MerR family transcriptional regulator [Corynebacterium jeikeium
ATCC 43734]
Length=129
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/129 (52%), Positives = 79/129 (62%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M I E+A T+ KTLRFYE GLLPP RT SGYR+Y PE V R+ FIHRGQAAGL L
Sbjct 1 MWIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPETVARIDFIHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G APC HVR LL R+ E+ QIA+L L + L A++ P
Sbjct 61 AQIRQILDIRDGGHAPCGHVRDLLDVRLAEIEQQIAQLSVLRDTIADLSQDAAHPDPETC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 STDQVCRYL 129
>gi|309813301|ref|ZP_07707014.1| transcriptional regulator, MerR family [Dermacoccus sp. Ellin185]
gi|308432746|gb|EFP56665.1| transcriptional regulator, MerR family [Dermacoccus sp. Ellin185]
Length=129
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/129 (52%), Positives = 78/129 (61%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+ KTLRFYE GLLPP RT SGYR+Y PE R+ F+HRGQAAGL L
Sbjct 1 MRIGELAERAGTTAKTLRFYEEQGLLPPAERTPSGYRDYAPETAARIDFVHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G APC HVR LL R E+ QIA+L AL + L A+ P
Sbjct 61 AQIRQILDIRDGGAAPCEHVRDLLDARFAEIGQQIAQLTALRDTIAELRHDAAQPDPDSC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 SADQVCRYL 129
>gi|172040313|ref|YP_001800027.1| MerR family transcriptional regulator [Corynebacterium urealyticum
DSM 7109]
gi|300781556|ref|ZP_07091410.1| MerR family transcriptional regulator [Corynebacterium genitalium
ATCC 33030]
gi|171851617|emb|CAQ04593.1| putative transcriptional regulator (MerR family) [Corynebacterium
urealyticum DSM 7109]
gi|300533263|gb|EFK54324.1| MerR family transcriptional regulator [Corynebacterium genitalium
ATCC 33030]
Length=129
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/129 (52%), Positives = 79/129 (62%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M I E+A T+ KTLRFYE GLLPP RT SGYR+Y PE V R+ FIHRGQAAGL L
Sbjct 1 MWIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPETVARIDFIHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G APC HVR LL R+ E+ QIA+L L + L A++ P
Sbjct 61 AQIRQILDIRDGGHAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLSQDAAHPDPETC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 STDQVCRYL 129
>gi|219883275|ref|YP_002478436.1| transcriptional regulator, MerR family [Arthrobacter chlorophenolicus
A6]
gi|219862120|gb|ACL42460.1| transcriptional regulator, MerR family [Arthrobacter chlorophenolicus
A6]
Length=129
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/129 (49%), Positives = 82/129 (64%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E AA +TKTLRFYE+ GLLPP R +GYR+YG E + RL FI RG+AAGL L
Sbjct 1 MRIGEAAAAAGMTTKTLRFYEDRGLLPPAHRATNGYRDYGGEAITRLEFIRRGRAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++ IL + D G APC HVR LL+ ++ ++ AQIAEL AL + D A+ G P +
Sbjct 61 AQISDILTVRDHGTAPCTHVRDLLARQLADLDAQIAELTALRAAVAEFHDTAAAGDPRKC 120
Query 121 DHSTVCWIL 129
D +C L
Sbjct 121 DPDQICSYL 129
>gi|325965373|ref|YP_004243278.1| MerR family transcriptional regulator [Arthrobacter phenanthrenivorans
Sphe3]
gi|325965450|ref|YP_004243355.1| transcriptional regulator [Arthrobacter phenanthrenivorans Sphe3]
gi|323471460|gb|ADX75144.1| putative transcriptional regulator [Arthrobacter phenanthrenivorans
Sphe3]
gi|323471537|gb|ADX75221.1| putative transcriptional regulator [Arthrobacter phenanthrenivorans
Sphe3]
Length=130
Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/129 (50%), Positives = 87/129 (68%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E AA +TKTLRFYE+SGLLP R+++GYR+Y + V RL FI RG+AAGLAL
Sbjct 2 MRIGEAAAAAGMTTKTLRFYEDSGLLPAAKRSSNGYRDYHDDSVARLEFIRRGRAAGLAL 61
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++R+IL++ D GEAPCAHV+ LLS ++ E+ QI+EL+AL + L A+ G
Sbjct 62 TQIREILSLRDAGEAPCAHVQDLLSNQLAELDHQISELMALRSIVAGLHATAASGTDASC 121
Query 121 DHSTVCWIL 129
D +C L
Sbjct 122 DPEQICSYL 130
>gi|116670334|ref|YP_831267.1| MerR family transcriptional regulator [Arthrobacter sp. FB24]
gi|116610443|gb|ABK03167.1| transcriptional regulator, MerR family [Arthrobacter sp. FB24]
Length=145
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/129 (50%), Positives = 87/129 (68%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E AA +TKTLRFYE+SGLLP R+++GYR+Y + V RL FI RG+AAGLAL
Sbjct 17 MRIGEAAAAAGMTTKTLRFYEDSGLLPAAKRSSNGYRDYHDDSVARLEFIRRGRAAGLAL 76
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++R+IL++ D GEAPCAHV+ LLS ++ E+ QI+EL+AL + L A+ G
Sbjct 77 TQIREILSLRDAGEAPCAHVQDLLSNQLAELDHQISELMALRSIVAGLHATAASGTDASC 136
Query 121 DHSTVCWIL 129
D +C L
Sbjct 137 DPEQICSYL 145
>gi|326331455|ref|ZP_08197745.1| Cd(II)/Pb(II)-responsive transcriptional regulator [Nocardioidaceae
bacterium Broad-1]
gi|325950711|gb|EGD42761.1| Cd(II)/Pb(II)-responsive transcriptional regulator [Nocardioidaceae
bacterium Broad-1]
Length=129
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/129 (49%), Positives = 81/129 (63%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A + KTLRFYE GLLPP RT+SGYR+Y + + R+ FIHRGQAAGL L
Sbjct 1 MRIGELAEAAGSKAKTLRFYEERGLLPPAERTSSGYRDYTADAIARVDFIHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
+++QIL I D G+APC HV LL +R+ E+ QIA+L AL + L D A+ P
Sbjct 61 AQIKQILDIRDHGQAPCEHVLDLLDSRLSEIEEQIAQLDALRETIAALRDGAADPDPESC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 GSDLVCRYL 129
>gi|116662160|ref|YP_829215.1| MerR family transcriptional regulator [Arthrobacter sp. FB24]
gi|116662259|ref|YP_829313.1| MerR family transcriptional regulator [Arthrobacter sp. FB24]
gi|116662364|ref|YP_829417.1| MerR family transcriptional regulator [Arthrobacter sp. FB24]
gi|116612912|gb|ABK05634.1| transcriptional regulator, MerR family [Arthrobacter sp. FB24]
gi|116613023|gb|ABK05732.1| transcriptional regulator, MerR family [Arthrobacter sp. FB24]
gi|116613143|gb|ABK05836.1| transcriptional regulator, MerR family [Arthrobacter sp. FB24]
Length=130
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/113 (59%), Positives = 82/113 (73%), Gaps = 0/113 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
MKI +VA T T+TKTLRFYE GLLPP RTASGYR+Y ++V R+ FIHRGQAAGL L
Sbjct 1 MKIGQVAETTGTTTKTLRFYEAEGLLPPAERTASGYRDYSEDVVGRIGFIHRGQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHAS 113
++RQIL I DRG+ PC+HVR+LL R+ E+ AQ EL+AL + L A+
Sbjct 61 AQIRQILNIRDRGQTPCSHVRELLGQRLTELDAQTTELLALRETISQLYAQAA 113
>gi|319947649|ref|ZP_08021870.1| putative transcriptional regulator [Dietzia cinnamea P4]
gi|319438678|gb|EFV93577.1| putative transcriptional regulator [Dietzia cinnamea P4]
Length=129
Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/129 (49%), Positives = 82/129 (64%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+AA T+ KTLR+YE+ GLLPPP RT +GYR+Y ++ RL FI RGQ+AGL+L
Sbjct 1 MRIGELAATAGTTPKTLRYYESVGLLPPPQRTLNGYRDYPEHVISRLDFIRRGQSAGLSL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
+ +IL I D G+APCAHV LL TR+DE+ QIA+L+ L + L P
Sbjct 61 ARIGEILRIRDDGQAPCAHVDTLLVTRLDEIDQQIADLLQLRQAVAQLQSANRTVDPATC 120
Query 121 DHSTVCWIL 129
T+C L
Sbjct 121 QAETICRYL 129
>gi|325066717|ref|ZP_08125390.1| putative transcriptional regulator [Actinomyces oris K20]
Length=129
Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/129 (48%), Positives = 80/129 (63%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+TKTLRFYE+ GLLPP RT GYR+Y E + R+ FIHRGQA GL+L
Sbjct 1 MRIGELAEAAGTTTKTLRFYEDQGLLPPAERTPGGYRDYTTESLTRIDFIHRGQAVGLSL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQ+L I D G+APC HVR LL R+ ++ ++ +L L L L D A + P
Sbjct 61 AQIRQVLDIRDHGQAPCDHVRDLLDARLTDIDLKLRQLHDLRDTLAGLRDQAEHVEPDTC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 SSDQVCRYL 129
>gi|332672148|ref|YP_004455156.1| MerR family transcriptional regulator [Cellulomonas fimi ATCC
484]
gi|332341186|gb|AEE47769.1| transcriptional regulator, MerR family [Cellulomonas fimi ATCC
484]
Length=129
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/129 (51%), Positives = 82/129 (64%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E+A T+TKTLR+YE LLP PARTA+GYR+Y V RL FI R QAAGL L
Sbjct 1 MRIGELARAGGTTTKTLRYYETVALLPAPARTAAGYRDYDATTVARLDFIRRSQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++R++L + D G APC HV +LL R+ E+ QIA+L AL + L D AS P
Sbjct 61 AQIREVLQVRDAGTAPCHHVHELLDRRVHELDRQIADLQALRLTVAELRDSASEADPETC 120
Query 121 DHSTVCWIL 129
+ STVC L
Sbjct 121 NPSTVCRYL 129
>gi|119715881|ref|YP_922846.1| MerR family transcriptional regulator [Nocardioides sp. JS614]
gi|119536542|gb|ABL81159.1| transcriptional regulator, MerR family [Nocardioides sp. JS614]
Length=133
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/132 (46%), Positives = 79/132 (60%), Gaps = 0/132 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M I ++A + +T+RFYE GLLP P R A+GYR YG + + RLRFI QA+GL L
Sbjct 1 MLIGQLADAAGVTAQTIRFYERDGLLPRPPREANGYRVYGGDTLGRLRFIRSAQASGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
E+R I+ + D G PC HV LL+ R+DEV A++ EL AL G L+ LL P +
Sbjct 61 AEIRGIVDLRDAGTVPCTHVTTLLAARLDEVHARVRELEALAGELERLLTRGDRLDPADC 120
Query 121 DHSTVCWILESD 132
+ VC IL D
Sbjct 121 GDAAVCHILVGD 132
>gi|88855153|ref|ZP_01129818.1| putative transcriptional regulator (MerR family) protein [marine
actinobacterium PHSC20C1]
gi|88815681|gb|EAR25538.1| putative transcriptional regulator (MerR family) protein [marine
actinobacterium PHSC20C1]
Length=132
Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/129 (44%), Positives = 78/129 (61%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M I EVA + T+RFYE GLLP P R +GYR+Y P +VDR+ FI QAAGL L
Sbjct 1 MLIGEVADRLDVPRHTIRFYEKQGLLPEPQRQGNGYRDYDPAVVDRVTFIRNSQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
E+ IL++ D GEAPC HV LL +++ V+ ++ +L ALE L+ L+ A P +
Sbjct 61 SEIMSILSLRDAGEAPCTHVSSLLEHKLEGVQERLKDLAALETELKQLIHEAQGLDPAKC 120
Query 121 DHSTVCWIL 129
+ +C I+
Sbjct 121 TEAEICTII 129
>gi|88856549|ref|ZP_01131206.1| putative transcriptional regulator (MerR family) protein [marine
actinobacterium PHSC20C1]
gi|88814203|gb|EAR24068.1| putative transcriptional regulator (MerR family) protein [marine
actinobacterium PHSC20C1]
Length=132
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/129 (45%), Positives = 78/129 (61%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I EVA +T+RFYE GLLP P R ++GYR+Y ++ RL FI GQ AGL L
Sbjct 1 MRIGEVANTAGLPAQTIRFYERRGLLPQPQRDSNGYRSYDSTVLSRLGFIRNGQGAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
E+ +L + G +PCAHVR LLS ++ +VR + EL ALEG L+TL+ + P
Sbjct 61 LEIATVLELRGDGLSPCAHVRDLLSEKLHDVRRRQTELAALEGELETLIGRSERLDPAHC 120
Query 121 DHSTVCWIL 129
S +C I+
Sbjct 121 TDSEICHII 129
>gi|119952468|ref|YP_950109.1| MerR family transcriptional regulator [Arthrobacter aurescens
TC1]
gi|42558679|gb|AAS20019.1| transcriptional regulator [Arthrobacter aurescens]
gi|119951598|gb|ABM10508.1| putative Transcriptional regulator, MerR family [Arthrobacter
aurescens TC1]
Length=183
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/126 (44%), Positives = 73/126 (58%), Gaps = 0/126 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E AA +TKT+RFYEN GLLPP R+A+GYR YG + + RL FI R Q AGL L
Sbjct 55 MRIGEAAAAVGMTTKTIRFYENRGLLPPAERSANGYREYGRDTISRLEFIRRSQIAGLTL 114
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
+++ IL I D G PC HVR +L ++ ++ +IAEL AL + P
Sbjct 115 AQIQGILQIRDNGITPCTHVRDVLGKQLIDLDRKIAELTALRATVAEQYAFVEAADPRNC 174
Query 121 DHSTVC 126
D +C
Sbjct 175 DAEQIC 180
>gi|119489599|ref|ZP_01622359.1| Transcriptional Regulator, MerR family protein [Lyngbya sp. PCC
8106]
gi|119454511|gb|EAW35659.1| Transcriptional Regulator, MerR family protein [Lyngbya sp. PCC
8106]
Length=141
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/127 (42%), Positives = 78/127 (62%), Gaps = 1/127 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPA-RTASGYRNYGPEIVDRLRFIHRGQAAGLA 59
+KI EVA+L+ S KT+R+YE+ GLL P R+ SGYR + ++ RL F+ R ++ GL+
Sbjct 10 LKIGEVASLSGLSVKTIRYYEDIGLLSPTVERSESGYRLFNSLVLTRLSFVKRAKSLGLS 69
Query 60 LQEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTE 119
L E+R+IL I D G+ PC V+Q L ++++ + QIA L L G L+ LL H P
Sbjct 70 LSEIREILEIRDLGQLPCGEVKQCLLSKVEAINQQIAALEILRGELKELLAHWQEQPSAS 129
Query 120 HDHSTVC 126
T+C
Sbjct 130 QAAQTIC 136
>gi|86608567|ref|YP_477329.1| MerR family transcriptional regulator [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557109|gb|ABD02066.1| transcriptional regulator, MerR family [Synechococcus sp. JA-2-3B'a(2-13)]
Length=159
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/132 (42%), Positives = 80/132 (61%), Gaps = 1/132 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPA-RTASGYRNYGPEIVDRLRFIHRGQAAGLA 59
+KI +VA S +T+R+YE+ GLL P R S YR + P ++ RL FI R Q+ GL+
Sbjct 5 LKIGQVALAAGLSVRTVRYYESIGLLKPTVERAESSYRLFDPSVLVRLAFIRRCQSLGLS 64
Query 60 LQEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTE 119
L+E+RQIL +HDRGE PC +RQ L ++ E+ +IA+L AL+ +Q LL P
Sbjct 65 LEEIRQILDVHDRGEQPCPEIRQHLQGKLQEIEQRIADLQALKSQIQGLLSDWQITPAAA 124
Query 120 HDHSTVCWILES 131
+ +C IL+
Sbjct 125 DEKEVICPILQK 136
>gi|209525139|ref|ZP_03273683.1| transcriptional regulator, MerR family [Arthrospira maxima CS-328]
gi|284052211|ref|ZP_06382421.1| transcriptional regulator, MerR family protein [Arthrospira platensis
str. Paraca]
gi|209494548|gb|EDZ94859.1| transcriptional regulator, MerR family [Arthrospira maxima CS-328]
gi|291570423|dbj|BAI92695.1| MerR family transcriptional regulator [Arthrospira platensis
NIES-39]
Length=140
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/127 (44%), Positives = 76/127 (60%), Gaps = 1/127 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPA-RTASGYRNYGPEIVDRLRFIHRGQAAGLA 59
+KI EVAA + S KT+R+Y++ GLL P R+ SGYR + PE++ RL FI R Q GL+
Sbjct 7 LKIGEVAAESGLSVKTIRYYDDIGLLWPTVDRSRSGYRLFAPEVLTRLAFIKRAQGLGLS 66
Query 60 LQEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTE 119
L E+ +IL I DRG+ PC V+Q L ++ ++ QI L L+G LQ LL P
Sbjct 67 LAEIAEILKIRDRGDIPCDQVKQRLQAKVADINQQIIALEGLKGELQELLSQWEDQPSAS 126
Query 120 HDHSTVC 126
T+C
Sbjct 127 RMADTIC 133
>gi|84496051|ref|ZP_00994905.1| putative transcriptional regulator, MerR family protein [Janibacter
sp. HTCC2649]
gi|84382819|gb|EAP98700.1| putative transcriptional regulator, MerR family protein [Janibacter
sp. HTCC2649]
Length=133
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/129 (45%), Positives = 75/129 (59%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M I E+A T+T+RFYE GLLP P R A+GYRNY + RL FI QAAGL L
Sbjct 1 MLIGELAEAVALPTQTIRFYERKGLLPDPERGANGYRNYDGSTLTRLYFIGAAQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
E+ I+ + D G APC HV L+ ++ VRA+IA L+ALE L L++ + P +
Sbjct 61 AEIGSIIELRDDGTAPCTHVAGLIENKLSTVRARIATLVALEAELDGLVERSHRLDPADC 120
Query 121 DHSTVCWIL 129
+C IL
Sbjct 121 SDGEICHIL 129
>gi|294631661|ref|ZP_06710221.1| Cd(II)/Pb(II)-responsive transcriptional regulator [Streptomyces
sp. e14]
gi|292834994|gb|EFF93343.1| Cd(II)/Pb(II)-responsive transcriptional regulator [Streptomyces
sp. e14]
Length=134
Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/130 (43%), Positives = 78/130 (60%), Gaps = 0/130 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I ++A T +TKT+RFYE+SGLLP P RT GYR+Y RL FI Q AGL L
Sbjct 1 MRIGDLATHTGLTTKTIRFYEDSGLLPAPPRTPGGYRDYPDHTATRLAFIRDAQRAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
E+R +LA+ D G APC HV +L+ +D++ ++A+L+A L+ L A+ P
Sbjct 61 AEIRSVLALRDDGHAPCTHVTRLIHGHLDDIDRRMADLVATREALRDLAGRAATTDPAAC 120
Query 121 DHSTVCWILE 130
+C IL+
Sbjct 121 GADDICTILK 130
>gi|227503931|ref|ZP_03933980.1| MerR family transcriptional regulator [Corynebacterium striatum
ATCC 6940]
gi|227199554|gb|EEI79602.1| MerR family transcriptional regulator [Corynebacterium striatum
ATCC 6940]
Length=129
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/126 (43%), Positives = 74/126 (59%), Gaps = 0/126 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I EVA +TKT+RFYE+ GLLPP R+A+GYR+Y + + RL FI R Q AGL L
Sbjct 1 MRIGEVADAAGITTKTIRFYEDRGLLPPAERSANGYRDYTHDTLSRLEFIRRSQVAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
+++ IL I D G PC HVR +L ++ ++ +IAEL AL + A P
Sbjct 61 AQIQGILRIRDSGLTPCTHVRDVLGKQLQDLDRKIAELTALRVTVAEQYATAEVADPQRC 120
Query 121 DHSTVC 126
D +C
Sbjct 121 DAEQIC 126
>gi|334117896|ref|ZP_08491987.1| transcriptional regulator, MerR family [Microcoleus vaginatus
FGP-2]
gi|333461005|gb|EGK89613.1| transcriptional regulator, MerR family [Microcoleus vaginatus
FGP-2]
Length=142
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/132 (41%), Positives = 79/132 (60%), Gaps = 1/132 (0%)
Query 2 KISEVAALTNTSTKTLRFYENSGLLPPPA-RTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
KI VAA + S KT+R+YE GLL P R+ +GYR +G + +RL FI R Q GL+L
Sbjct 11 KIGSVAACSGLSVKTVRYYEEMGLLSPAVKRSPAGYRLFGETVFNRLAFIKRSQTLGLSL 70
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
QE++ IL + DRGE PC+ +Q L+ +++E+ QIA L L+ LQ +L+ P
Sbjct 71 QEIKDILQVRDRGELPCSEAKQHLTAKVEEISVQIAALETLKRELQGILNCWQEQPSQAS 130
Query 121 DHSTVCWILESD 132
T+C ++ D
Sbjct 131 ITRTICPNIQRD 142
>gi|145223799|ref|YP_001134477.1| MerR family transcriptional regulator [Mycobacterium gilvum PYR-GCK]
gi|315444093|ref|YP_004076972.1| transcriptional regulator [Mycobacterium sp. Spyr1]
gi|145216285|gb|ABP45689.1| putative transcriptional regulator, MerR family [Mycobacterium
gilvum PYR-GCK]
gi|315262396|gb|ADT99137.1| predicted transcriptional regulator [Mycobacterium sp. Spyr1]
Length=129
Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/129 (45%), Positives = 78/129 (61%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I ++A T +T TLR+YE+ GLLPP R+ +GYR+Y + + R+ FI RGQAAG +L
Sbjct 1 MRIGKLAEATGATTATLRYYEDEGLLPPAERSPAGYRDYAADTIARVGFIRRGQAAGFSL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
++RQIL I D G APC HVR LL R+ ++ QI+ L+AL + L A P
Sbjct 61 AQIRQILDIRDSGHAPCTHVRDLLDIRLTDLDEQISALVALRETIARLRQGAESVDPESC 120
Query 121 DHSTVCWIL 129
VC L
Sbjct 121 SADDVCRYL 129
>gi|292491738|ref|YP_003527177.1| transcription regulator MerR DNA binding protein [Nitrosococcus
halophilus Nc4]
gi|291580333|gb|ADE14790.1| Transcription regulator MerR DNA binding protein [Nitrosococcus
halophilus Nc4]
Length=146
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/131 (40%), Positives = 75/131 (58%), Gaps = 1/131 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M I ++A L + +T+R+YE GLLPPP RT +GYR Y + ++RLRFI + QA G +L
Sbjct 7 MFIGKLAQLVEVNVQTIRYYERIGLLPPPTRTKNGYRVYNEKALNRLRFIKQAQALGFSL 66
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
E++ ILA+ G+ PC VRQ ++ EV ++ EL L L+ H P
Sbjct 67 AEIKTILALSTTGQCPCPQVRQFAKAKLWEVDQKLKELFTYRQTLAGLIRHWDRTPDKAS 126
Query 121 DHSTVCWILES 131
D VC ++ES
Sbjct 127 DE-VVCTLIES 136
>gi|219883294|ref|YP_002478455.1| transcriptional regulator, MerR family [Arthrobacter chlorophenolicus
A6]
gi|219862139|gb|ACL42479.1| transcriptional regulator, MerR family [Arthrobacter chlorophenolicus
A6]
Length=129
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/101 (50%), Positives = 68/101 (68%), Gaps = 0/101 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I E AA +TK +RFYE+ GLLPP R+A+GYR Y + V RL FI R Q AGL+L
Sbjct 1 MRIGEAAAAVGMTTKAIRFYEDRGLLPPAERSANGYREYADDTVSRLEFIRRSQVAGLSL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIAL 101
+++ IL I D G PCAHV +L+ ++ ++ QIAE+ AL
Sbjct 61 AQIQGILRIRDSGATPCAHVSDVLARQLMDLDRQIAEITAL 101
>gi|86606208|ref|YP_474971.1| MerR family transcriptional regulator [Synechococcus sp. JA-3-3Ab]
gi|86554750|gb|ABC99708.1| transcriptional regulator, MerR family [Synechococcus sp. JA-3-3Ab]
Length=155
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/133 (42%), Positives = 86/133 (65%), Gaps = 3/133 (2%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPA-RTASGYRNYGPEIVDRLRFIHRGQAAGLA 59
M+IS+VAA+ +T+R+YE+ GLL P R+ S YR + P ++ RL FI R Q+ GL+
Sbjct 1 MRISQVAAVAGLPVRTVRYYESLGLLKPTVQRSESSYRLFHPAVLGRLAFIRRCQSLGLS 60
Query 60 LQEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLL-DHASYGPPT 118
L+E+RQIL ++DRGE PC +RQ L ++ ++ ++AEL L+G +++LL D PT
Sbjct 61 LEEIRQILQLYDRGEQPCPEIRQHLQEKLWQIEERMAELQTLKGQIESLLSDWRIPAEPT 120
Query 119 EHDHSTVCWILES 131
+ +C IL+
Sbjct 121 AQE-DVICPILQK 132
>gi|220908114|ref|YP_002483425.1| MerR family transcriptional regulator [Cyanothece sp. PCC 7425]
gi|219864725|gb|ACL45064.1| transcriptional regulator, MerR family [Cyanothece sp. PCC 7425]
Length=150
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/132 (41%), Positives = 78/132 (60%), Gaps = 1/132 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPP-PARTASGYRNYGPEIVDRLRFIHRGQAAGLA 59
++I EVA + KT+R+YE+ GLL P R+ +GYR + P++++RL FI R Q GL
Sbjct 16 LQIGEVAKRSGLPVKTIRYYEDIGLLKPLVVRSPTGYRLFQPQVLNRLAFIKRAQGLGLN 75
Query 60 LQEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTE 119
L E+ +ILA+HDRGE PC ++ L R+ + QI L L+ L+ +L PP E
Sbjct 76 LAEIGEILAVHDRGELPCGQIKDKLQARLGAIAEQIHSLTTLQVELEGILSAWQDQPPPE 135
Query 120 HDHSTVCWILES 131
T+C L+S
Sbjct 136 LRAQTICPNLQS 147
>gi|269839487|ref|YP_003324179.1| MerR family transcriptional regulator [Thermobaculum terrenum
ATCC BAA-798]
gi|269791217|gb|ACZ43357.1| transcriptional regulator, MerR family [Thermobaculum terrenum
ATCC BAA-798]
Length=137
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/130 (40%), Positives = 79/130 (61%), Gaps = 3/130 (2%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
++I ++AA + KT+R+YE GLLP RT SGYR YGP V+RLRF+ + +A GL+L
Sbjct 6 LRIGDLAAELGLNPKTIRYYEQIGLLPAAPRTESGYRVYGPGDVERLRFVLKAKAVGLSL 65
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
+E+++IL + G+ PC HV LL +I V Q+ L ++ L L D A+ T
Sbjct 66 KEIKEILLLQQSGQQPCEHVLALLDRKITAVEQQLLALTSIRQELVALRDQAA---QTMG 122
Query 121 DHSTVCWILE 130
+ + +C ++E
Sbjct 123 NETCICGLIE 132
>gi|325001064|ref|ZP_08122176.1| putative transcriptional regulator [Pseudonocardia sp. P1]
Length=144
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/129 (39%), Positives = 74/129 (58%), Gaps = 0/129 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+I ++A + +TKT+RFYE +GLLP P RT +GYR+Y + RL FI Q AGL L
Sbjct 1 MRIGDLATASGLTTKTIRFYEQAGLLPAPPRTPNGYRDYPEQTPARLTFIRDAQGAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH 120
E+R +L + + G+APCAHV L+ + ++ ++ EL L+ L A+ P
Sbjct 61 AEIRSVLVLREGGQAPCAHVTTLIDQHLADIERRLTELATTRDALRGLAHRAATTDPAAC 120
Query 121 DHSTVCWIL 129
+C IL
Sbjct 121 TEDDICTIL 129
>gi|329940437|ref|ZP_08289718.1| MerR family transcriptional regulator [Streptomyces griseoaurantiacus
M045]
gi|329300498|gb|EGG44395.1| MerR family transcriptional regulator [Streptomyces griseoaurantiacus
M045]
Length=113
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/108 (47%), Positives = 67/108 (63%), Gaps = 0/108 (0%)
Query 1 MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL 60
M+IS +A +T + KT+R+YE SGLLP P RTA GYR+Y PE RL FI QAAGL L
Sbjct 1 MRISTLATVTGLTAKTIRYYEQSGLLPAPPRTAGGYRDYPPEAQPRLTFIRDAQAAGLTL 60
Query 61 QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTL 108
E+R +LA+ D G+APC H L+ + + +I L + L+ L
Sbjct 61 AEIRGVLALRDSGQAPCPHAAALIEAHLRHIDERITALARTQAALRQL 108
Lambda K H
0.318 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127605758688
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40