BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3334

Length=146
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610470|ref|NP_217851.1|  MerR family transcriptional regulat...   299    9e-80
gi|340628319|ref|YP_004746771.1|  putative transcriptional regula...   298    2e-79
gi|296164288|ref|ZP_06846874.1|  MerR family transcriptional regu...   243    8e-63
gi|296165053|ref|ZP_06847607.1|  MerR family transcriptional regu...   238    3e-61
gi|77454715|ref|YP_345583.1|  MerR family transcriptional regulat...   150    8e-35
gi|229493314|ref|ZP_04387105.1|  transcriptional regulator, MerR ...   147    4e-34
gi|33867189|ref|NP_898747.1|  MerR family regulator [Rhodococcus ...   145    2e-33
gi|119714247|ref|YP_919389.1|  regulatory protein, MerR [Nocardio...   133    8e-30
gi|295394920|ref|ZP_06805133.1|  MerR family transcriptional regu...   132    2e-29
gi|296119135|ref|ZP_06837706.1|  transcriptional regulator, MerR ...   132    2e-29
gi|295395762|ref|ZP_06805950.1|  MerR family transcriptional regu...   131    3e-29
gi|311743818|ref|ZP_07717624.1|  MerR family transcriptional regu...   131    3e-29
gi|227549494|ref|ZP_03979543.1|  MerR family transcriptional regu...   131    3e-29
gi|239917147|ref|YP_002956705.1|  transcriptional regulator [Micr...   131    3e-29
gi|343926428|ref|ZP_08765933.1|  putative MerR family transcripti...   131    4e-29
gi|145294207|ref|YP_001137028.1|  hypothetical protein cgR_0164 [...   130    5e-29
gi|289704708|ref|ZP_06501132.1|  transcriptional regulator, MerR ...   130    5e-29
gi|227548155|ref|ZP_03978204.1|  MerR family transcriptional regu...   130    6e-29
gi|256826328|ref|YP_003150288.1|  transcriptional regulator [Kyto...   130    7e-29
gi|311741727|ref|ZP_07715549.1|  MerR family transcriptional regu...   130    9e-29
gi|68536527|ref|YP_251232.1|  MerR family transcriptional regulat...   129    1e-28
gi|309813301|ref|ZP_07707014.1|  transcriptional regulator, MerR ...   129    2e-28
gi|172040313|ref|YP_001800027.1|  MerR family transcriptional reg...   129    2e-28
gi|219883275|ref|YP_002478436.1|  transcriptional regulator, MerR...   129    2e-28
gi|325965373|ref|YP_004243278.1|  MerR family transcriptional reg...   126    9e-28
gi|116670334|ref|YP_831267.1|  MerR family transcriptional regula...   126    1e-27
gi|326331455|ref|ZP_08197745.1|  Cd(II)/Pb(II)-responsive transcr...   125    1e-27
gi|116662160|ref|YP_829215.1|  MerR family transcriptional regula...   125    3e-27
gi|319947649|ref|ZP_08021870.1|  putative transcriptional regulat...   123    9e-27
gi|325066717|ref|ZP_08125390.1|  putative transcriptional regulat...   123    9e-27
gi|332672148|ref|YP_004455156.1|  MerR family transcriptional reg...   123    1e-26
gi|119715881|ref|YP_922846.1|  MerR family transcriptional regula...   118    3e-25
gi|88855153|ref|ZP_01129818.1|  putative transcriptional regulato...   114    7e-24
gi|88856549|ref|ZP_01131206.1|  putative transcriptional regulato...   113    1e-23
gi|119952468|ref|YP_950109.1|  MerR family transcriptional regula...   112    2e-23
gi|119489599|ref|ZP_01622359.1|  Transcriptional Regulator, MerR ...   111    4e-23
gi|86608567|ref|YP_477329.1|  MerR family transcriptional regulat...   110    5e-23
gi|209525139|ref|ZP_03273683.1|  transcriptional regulator, MerR ...   110    5e-23
gi|84496051|ref|ZP_00994905.1|  putative transcriptional regulato...   110    6e-23
gi|294631661|ref|ZP_06710221.1|  Cd(II)/Pb(II)-responsive transcr...   110    7e-23
gi|227503931|ref|ZP_03933980.1|  MerR family transcriptional regu...   108    3e-22
gi|334117896|ref|ZP_08491987.1|  transcriptional regulator, MerR ...   108    3e-22
gi|145223799|ref|YP_001134477.1|  MerR family transcriptional reg...   107    8e-22
gi|292491738|ref|YP_003527177.1|  transcription regulator MerR DN...   106    1e-21
gi|219883294|ref|YP_002478455.1|  transcriptional regulator, MerR...   105    2e-21
gi|86606208|ref|YP_474971.1|  MerR family transcriptional regulat...   105    3e-21
gi|220908114|ref|YP_002483425.1|  MerR family transcriptional reg...   104    4e-21
gi|269839487|ref|YP_003324179.1|  MerR family transcriptional reg...   102    2e-20
gi|325001064|ref|ZP_08122176.1|  putative transcriptional regulat...   102    3e-20
gi|329940437|ref|ZP_08289718.1|  MerR family transcriptional regu...   101    4e-20


>gi|15610470|ref|NP_217851.1| MerR family transcriptional regulator [Mycobacterium tuberculosis 
H37Rv]
 gi|15842931|ref|NP_337968.1| MerR family transcriptional regulator [Mycobacterium tuberculosis 
CDC1551]
 gi|31794519|ref|NP_857012.1| MerR family transcriptional regulator [Mycobacterium bovis AF2122/97]
 80 more sequence titles
 Length=146

 Score =  299 bits (766),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 146/146 (100%), Positives = 146/146 (100%), Gaps = 0/146 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL
Sbjct  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
            QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH
Sbjct  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120

Query  121  DHSTVCWILESDLDEPTAIEVSDIHA  146
            DHSTVCWILESDLDEPTAIEVSDIHA
Sbjct  121  DHSTVCWILESDLDEPTAIEVSDIHA  146


>gi|340628319|ref|YP_004746771.1| putative transcriptional regulatory protein [Mycobacterium canettii 
CIPT 140010059]
 gi|340006509|emb|CCC45693.1| putative transcriptional regulatory protein (probably MERR-family) 
[Mycobacterium canettii CIPT 140010059]
Length=146

 Score =  298 bits (762),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 145/146 (99%), Positives = 145/146 (99%), Gaps = 0/146 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGL L
Sbjct  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
            QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH
Sbjct  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120

Query  121  DHSTVCWILESDLDEPTAIEVSDIHA  146
            DHSTVCWILESDLDEPTAIEVSDIHA
Sbjct  121  DHSTVCWILESDLDEPTAIEVSDIHA  146


>gi|296164288|ref|ZP_06846874.1| MerR family transcriptional regulator [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295900350|gb|EFG79770.1| MerR family transcriptional regulator [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=155

 Score =  243 bits (619),  Expect = 8e-63, Method: Compositional matrix adjust.
 Identities = 114/143 (80%), Positives = 130/143 (91%), Gaps = 0/143 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            MKI E+A LTNT+TKT+RFYE+ GLLPPPAR+ASGYR+YGPEIVDRLRFIHRGQAAGL L
Sbjct  10   MKIGELAKLTNTTTKTIRFYEDLGLLPPPARSASGYRDYGPEIVDRLRFIHRGQAAGLTL  69

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
            Q+VRQILAIHDRGEAPC HVRQ+L +R+DEVRAQIAEL+ALEGHLQTLLDHAS+  PTEH
Sbjct  70   QKVRQILAIHDRGEAPCGHVRQVLHSRLDEVRAQIAELVALEGHLQTLLDHASHHAPTEH  129

Query  121  DHSTVCWILESDLDEPTAIEVSD  143
            DHS VCWILE+DL  P + E++D
Sbjct  130  DHSMVCWILENDLGVPASDELAD  152


>gi|296165053|ref|ZP_06847607.1| MerR family transcriptional regulator [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295899585|gb|EFG79037.1| MerR family transcriptional regulator [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=143

 Score =  238 bits (606),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 109/134 (82%), Positives = 124/134 (93%), Gaps = 0/134 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A L+NTS KT+RFYEN+GLLPPPARTASGYR+YGPE+VDRLRFIHRGQAAGL L
Sbjct  1    MQIGELAKLSNTSAKTIRFYENAGLLPPPARTASGYRDYGPEVVDRLRFIHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
            Q+VRQILAIHDRGE PC HV+Q+L TR+D+VRAQIAEL+ALEGHLQTLLDHA++  PTEH
Sbjct  61   QKVRQILAIHDRGEVPCGHVQQVLHTRLDQVRAQIAELVALEGHLQTLLDHAAHAAPTEH  120

Query  121  DHSTVCWILESDLD  134
            D STVCWILESDLD
Sbjct  121  DQSTVCWILESDLD  134


>gi|77454715|ref|YP_345583.1| MerR family transcriptional regulator [Rhodococcus erythropolis 
PR4]
 gi|77019715|dbj|BAE46091.1| putative MerR family transcriptional regulator [Rhodococcus erythropolis 
PR4]
Length=140

 Score =  150 bits (378),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 70/132 (54%), Positives = 92/132 (70%), Gaps = 0/132 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            MKI E+AA +  + KTLRFYE+SG++P P R ++GYR++GPE + RLRF+   Q+AGL L
Sbjct  1    MKIGELAARSGVAPKTLRFYEDSGVIPVPVRKSNGYRDFGPESLSRLRFVRSAQSAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
            +E+RQIL  HDRG APC  V ++LS  + +VR +I EL  LE +L  LL  A  G P E 
Sbjct  61   REIRQILTTHDRGAAPCEQVVEMLSEHLSQVRGKIRELATLETNLVALLGRAESGIPPET  120

Query  121  DHSTVCWILESD  132
            D   VCWILES+
Sbjct  121  DDVGVCWILESE  132


>gi|229493314|ref|ZP_04387105.1| transcriptional regulator, MerR family [Rhodococcus erythropolis 
SK121]
 gi|229319816|gb|EEN85646.1| transcriptional regulator, MerR family [Rhodococcus erythropolis 
SK121]
Length=152

 Score =  147 bits (372),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 69/132 (53%), Positives = 92/132 (70%), Gaps = 0/132 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            +KI E+AA +  + KTLRFYE+SG++P P R ++GYR++GPE + RLRF+   Q+AGL L
Sbjct  13   VKIGELAARSGVAPKTLRFYEDSGVIPVPVRKSNGYRDFGPESLSRLRFVRSAQSAGLTL  72

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
            +E+RQIL  HDRG APC  V ++LS  + +VR +I EL  LE +L  LL  A  G P E 
Sbjct  73   REIRQILTTHDRGAAPCEQVVEMLSEHLSQVRGKIRELATLETNLVALLGRAESGIPPET  132

Query  121  DHSTVCWILESD  132
            D   VCWILES+
Sbjct  133  DDVGVCWILESE  144


>gi|33867189|ref|NP_898747.1| MerR family regulator [Rhodococcus erythropolis]
 gi|33669023|gb|AAP74017.1| putative MerR-family regulator [Rhodococcus erythropolis]
Length=152

 Score =  145 bits (366),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 69/138 (50%), Positives = 93/138 (68%), Gaps = 0/138 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            +KI E+AA +  + KTLRFYE+SG++P P R ++GYR+YGPE + RLRF+   Q+AG  L
Sbjct  13   VKIGELAARSGVAPKTLRFYEDSGVIPVPVRKSNGYRDYGPESLARLRFVRSAQSAGFTL  72

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
            +E+R+IL  HDRG APC  V ++LS  + +VR +I EL  LE +L  LL  A    P+E 
Sbjct  73   REIREILTTHDRGAAPCEQVVEMLSEHLSQVRGKIRELATLETNLVALLSRAEGEIPSEA  132

Query  121  DHSTVCWILESDLDEPTA  138
            D   VCWILES+  E  A
Sbjct  133  DDVGVCWILESESQEGVA  150


>gi|119714247|ref|YP_919389.1| regulatory protein, MerR [Nocardioides sp. JS614]
 gi|119526156|gb|ABL79526.1| regulatory protein, MerR [Nocardioides sp. JS614]
Length=129

 Score =  133 bits (335),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 67/129 (52%), Positives = 83/129 (65%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+TKTLRFYE+ GLLP   RT SGYR+Y P+ + RL FIHRGQAAGL L
Sbjct  1    MRIGELAHAAGTTTKTLRFYEDQGLLPAAERTPSGYRDYTPDALARLDFIHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G  PC HV  LL  R+ ++ AQIA+L+AL   L  L D A++  P   
Sbjct  61   AQIRQILGIRDSGTPPCGHVHDLLDERLTDLDAQIAQLVALRASLAELRDQAAHADPDAC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  PADQVCRYL  129


>gi|295394920|ref|ZP_06805133.1| MerR family transcriptional regulator [Brevibacterium mcbrellneri 
ATCC 49030]
 gi|294972253|gb|EFG48115.1| MerR family transcriptional regulator [Brevibacterium mcbrellneri 
ATCC 49030]
Length=152

 Score =  132 bits (332),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 64/129 (50%), Positives = 83/129 (65%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+ KTLRFYE  GLLP   RTASGYR+Y PE   R+ FIHRGQAAGL L
Sbjct  24   MRIGELAEAAGTTAKTLRFYEEQGLLPAAERTASGYRDYDPEAATRIDFIHRGQAAGLTL  83

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             +++QIL I D GE PC HVR LL  R+ ++  QI++L++L  ++  L D A+   P   
Sbjct  84   AQIKQILDIRDGGEIPCGHVRDLLDVRLKDIERQISDLVSLRDNVAALRDAAAEPEPETC  143

Query  121  DHSTVCWIL  129
            +   VC  L
Sbjct  144  NADEVCRYL  152


>gi|296119135|ref|ZP_06837706.1| transcriptional regulator, MerR family [Corynebacterium ammoniagenes 
DSM 20306]
 gi|295967856|gb|EFG81110.1| transcriptional regulator, MerR family [Corynebacterium ammoniagenes 
DSM 20306]
Length=129

 Score =  132 bits (331),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 66/129 (52%), Positives = 81/129 (63%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+ KTLRFYE  GLLPP  RT SGYR+Y PE V R+ F+HRGQAAGL L
Sbjct  1    MRIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPETVARIDFVHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G+APC HVR LL  R+ E+  QIA+L  L   +  L   A++  P   
Sbjct  61   AQIRQILDIRDGGQAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  STDQVCRYL  129


>gi|295395762|ref|ZP_06805950.1| MerR family transcriptional regulator [Brevibacterium mcbrellneri 
ATCC 49030]
 gi|294971297|gb|EFG47184.1| MerR family transcriptional regulator [Brevibacterium mcbrellneri 
ATCC 49030]
Length=129

 Score =  131 bits (330),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 66/129 (52%), Positives = 81/129 (63%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+ KTLRFYE  GLLPP  RT SGYR+Y PE+V R+ F+HRGQAAGL L
Sbjct  1    MRIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPEMVARIDFVHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G APC HVR LL  R+ E+  QIA+L  L   +  L   A++  P   
Sbjct  61   AQIRQILDIRDGGHAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  STDQVCRYL  129


>gi|311743818|ref|ZP_07717624.1| MerR family transcriptional regulator [Aeromicrobium marinum 
DSM 15272]
 gi|311312948|gb|EFQ82859.1| MerR family transcriptional regulator [Aeromicrobium marinum 
DSM 15272]
Length=152

 Score =  131 bits (330),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 65/129 (51%), Positives = 86/129 (67%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+TKTLRFYE+ GLLP   RT +GYR+Y P+ V R+ F+HRGQAAGL L
Sbjct  24   MRIGELAEAAGTTTKTLRFYEDQGLLPTAERTPAGYRDYTPDAVSRIDFVHRGQAAGLTL  83

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             +++QIL I D G+APC HVR LL+ R+ ++  QIA+L AL  ++ +L D AS   P   
Sbjct  84   AQIKQILDIRDHGQAPCGHVRGLLAARLADIDRQIADLGALRDNVASLRDAASDPEPDTC  143

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  144  GADEVCRYL  152


>gi|227549494|ref|ZP_03979543.1| MerR family transcriptional regulator [Corynebacterium lipophiloflavum 
DSM 44291]
 gi|227078426|gb|EEI16389.1| MerR family transcriptional regulator [Corynebacterium lipophiloflavum 
DSM 44291]
Length=129

 Score =  131 bits (329),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 67/129 (52%), Positives = 82/129 (64%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I ++A  T T+TKTLRFYE SGLLPP  R ASGYR+Y    V R+ FIHRGQAAGL L
Sbjct  1    MRIGQLAEATGTTTKTLRFYEESGLLPPAERLASGYRDYAENAVGRVGFIHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G+APC HVR LL  R+ E+  QIA+L  L   +  L   A++  P   
Sbjct  61   AQIRQILDIRDGGQAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  STDQVCRYL  129


>gi|239917147|ref|YP_002956705.1| transcriptional regulator [Micrococcus luteus NCTC 2665]
 gi|281414384|ref|ZP_06246126.1| predicted transcriptional regulator [Micrococcus luteus NCTC 
2665]
 gi|239838354|gb|ACS30151.1| predicted transcriptional regulator [Micrococcus luteus NCTC 
2665]
Length=129

 Score =  131 bits (329),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 66/129 (52%), Positives = 79/129 (62%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+ KTLRFYE  GLLPP  RT SGYR+Y PE   R+ F+HRGQAAGL L
Sbjct  1    MRIGELAERAGTTAKTLRFYEEQGLLPPAERTPSGYRDYAPETAARIDFVHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G APC HVR LL  R+ E+  QIA+L AL   +  L   A+   P   
Sbjct  61   AQIRQILDIRDDGAAPCEHVRDLLDARLAEIEQQIAQLAALRDTITELRRDAAQPDPDSC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  SADQVCRYL  129


>gi|343926428|ref|ZP_08765933.1| putative MerR family transcriptional regulator [Gordonia alkanivorans 
NBRC 16433]
 gi|343763666|dbj|GAA12859.1| putative MerR family transcriptional regulator [Gordonia alkanivorans 
NBRC 16433]
Length=129

 Score =  131 bits (329),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 66/129 (52%), Positives = 80/129 (63%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+ KTLRFYE  GLLPP  RT SGYR+Y PE V R+ F+HRGQAAGL L
Sbjct  1    MRIGELAERAGTTAKTLRFYEGQGLLPPAERTQSGYRDYAPETVARIDFVHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G APC HVR LL  R+ E+  QIA+L  L   +  L   A++  P   
Sbjct  61   AQIRQILDIRDGGHAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  STDQVCRYL  129


>gi|145294207|ref|YP_001137028.1| hypothetical protein cgR_0164 [Corynebacterium glutamicum R]
 gi|57158021|dbj|BAD83995.1| transcriptional regulator MerR family [Corynebacterium glutamicum]
 gi|140844127|dbj|BAF53126.1| hypothetical protein [Corynebacterium glutamicum R]
 gi|344043321|gb|EGV39019.1| hypothetical protein CgS9114_15258 [Corynebacterium glutamicum 
S9114]
Length=129

 Score =  130 bits (328),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 66/129 (52%), Positives = 80/129 (63%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+ KTLRFYE  GLLPP  RT SGYR+Y PE V R+ F+HRGQAAGL L
Sbjct  1    MRIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPETVARIDFVHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G APC HVR LL  R+ E+  QIA+L  L   +  L   A++  P   
Sbjct  61   AQIRQILDIRDGGHAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  STDQVCRYL  129


>gi|289704708|ref|ZP_06501132.1| transcriptional regulator, MerR family [Micrococcus luteus SK58]
 gi|289558569|gb|EFD51836.1| transcriptional regulator, MerR family [Micrococcus luteus SK58]
Length=129

 Score =  130 bits (328),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 65/129 (51%), Positives = 84/129 (66%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I EVA  + T++KTLR+YE  GLLP   RT +GYR+YG E++DRL FI RGQAAGL L
Sbjct  1    MRIGEVARASGTTSKTLRYYEEVGLLPAADRTPAGYRDYGAEVLDRLDFIRRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++ Q+L I DRG+APC HV  LL TR+D +  Q+AEL  L   +  L + A+ G P   
Sbjct  61   AQIGQVLDIRDRGQAPCRHVTHLLDTRLDVIDRQLAELAQLRTTIADLREDAAAGDPATC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  SPEDVCRYL  129


>gi|227548155|ref|ZP_03978204.1| MerR family transcriptional regulator [Corynebacterium lipophiloflavum 
DSM 44291]
 gi|227079716|gb|EEI17679.1| MerR family transcriptional regulator [Corynebacterium lipophiloflavum 
DSM 44291]
Length=129

 Score =  130 bits (327),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 66/129 (52%), Positives = 80/129 (63%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+ KTLRFYE  GLLPP  RT SGYR+Y PE V R+ F+HRGQAAGL L
Sbjct  1    MRIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPETVARIDFVHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G APC HVR LL  R+ E+  QIA+L  L   +  L   A++  P   
Sbjct  61   AQIRQILDIRDGGHAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  SPDQVCRYL  129


>gi|256826328|ref|YP_003150288.1| transcriptional regulator [Kytococcus sedentarius DSM 20547]
 gi|256689721|gb|ACV07523.1| predicted transcriptional regulator [Kytococcus sedentarius DSM 
20547]
Length=129

 Score =  130 bits (327),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 66/129 (52%), Positives = 79/129 (62%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+ KTLRFYE  GLLPP  RT SGYR+Y PE   R+ F+HRGQAAGL L
Sbjct  1    MRIGELAERAGTTAKTLRFYEEQGLLPPAERTPSGYRDYAPETAARIDFVHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G APC HVR LL  R+ E+  QIA+L AL   +  L   A+   P   
Sbjct  61   AQIRQILDIRDGGAAPCEHVRDLLDARLAEIEQQIAQLTALRDTIAELRHDAAQPDPDSC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  SADQVCRYL  129


>gi|311741727|ref|ZP_07715549.1| MerR family transcriptional regulator [Corynebacterium pseudogenitalium 
ATCC 33035]
 gi|311303248|gb|EFQ79329.1| MerR family transcriptional regulator [Corynebacterium pseudogenitalium 
ATCC 33035]
Length=144

 Score =  130 bits (326),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 65/126 (52%), Positives = 81/126 (65%), Gaps = 0/126 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I ++A  T T+TKTLRFYE SGLLPP  R ASGYR+Y  + V R+ FIHRGQAAGL L
Sbjct  16   MRIGQLAEATGTTTKTLRFYEESGLLPPAERLASGYRDYAEDAVGRVGFIHRGQAAGLTL  75

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G+APC HVR LL  R+ E+  QI +L  L   +  L   A++  P   
Sbjct  76   AQIRQILDIRDGGQAPCEHVRDLLDVRLAEIEQQITQLSVLRDTIADLRQDAAHPDPETC  135

Query  121  DHSTVC  126
                VC
Sbjct  136  STDQVC  141


>gi|68536527|ref|YP_251232.1| MerR family transcriptional regulator [Corynebacterium jeikeium 
K411]
 gi|260577663|ref|ZP_05845599.1| MerR family transcriptional regulator [Corynebacterium jeikeium 
ATCC 43734]
 gi|68264126|emb|CAI37614.1| putative transcriptional regulator (MerR family) [Corynebacterium 
jeikeium K411]
 gi|258604209|gb|EEW17450.1| MerR family transcriptional regulator [Corynebacterium jeikeium 
ATCC 43734]
Length=129

 Score =  129 bits (324),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 67/129 (52%), Positives = 79/129 (62%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M I E+A    T+ KTLRFYE  GLLPP  RT SGYR+Y PE V R+ FIHRGQAAGL L
Sbjct  1    MWIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPETVARIDFIHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G APC HVR LL  R+ E+  QIA+L  L   +  L   A++  P   
Sbjct  61   AQIRQILDIRDGGHAPCGHVRDLLDVRLAEIEQQIAQLSVLRDTIADLSQDAAHPDPETC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  STDQVCRYL  129


>gi|309813301|ref|ZP_07707014.1| transcriptional regulator, MerR family [Dermacoccus sp. Ellin185]
 gi|308432746|gb|EFP56665.1| transcriptional regulator, MerR family [Dermacoccus sp. Ellin185]
Length=129

 Score =  129 bits (324),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 66/129 (52%), Positives = 78/129 (61%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+ KTLRFYE  GLLPP  RT SGYR+Y PE   R+ F+HRGQAAGL L
Sbjct  1    MRIGELAERAGTTAKTLRFYEEQGLLPPAERTPSGYRDYAPETAARIDFVHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G APC HVR LL  R  E+  QIA+L AL   +  L   A+   P   
Sbjct  61   AQIRQILDIRDGGAAPCEHVRDLLDARFAEIGQQIAQLTALRDTIAELRHDAAQPDPDSC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  SADQVCRYL  129


>gi|172040313|ref|YP_001800027.1| MerR family transcriptional regulator [Corynebacterium urealyticum 
DSM 7109]
 gi|300781556|ref|ZP_07091410.1| MerR family transcriptional regulator [Corynebacterium genitalium 
ATCC 33030]
 gi|171851617|emb|CAQ04593.1| putative transcriptional regulator (MerR family) [Corynebacterium 
urealyticum DSM 7109]
 gi|300533263|gb|EFK54324.1| MerR family transcriptional regulator [Corynebacterium genitalium 
ATCC 33030]
Length=129

 Score =  129 bits (323),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 67/129 (52%), Positives = 79/129 (62%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M I E+A    T+ KTLRFYE  GLLPP  RT SGYR+Y PE V R+ FIHRGQAAGL L
Sbjct  1    MWIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPETVARIDFIHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G APC HVR LL  R+ E+  QIA+L  L   +  L   A++  P   
Sbjct  61   AQIRQILDIRDGGHAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLSQDAAHPDPETC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  STDQVCRYL  129


>gi|219883275|ref|YP_002478436.1| transcriptional regulator, MerR family [Arthrobacter chlorophenolicus 
A6]
 gi|219862120|gb|ACL42460.1| transcriptional regulator, MerR family [Arthrobacter chlorophenolicus 
A6]
Length=129

 Score =  129 bits (323),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 63/129 (49%), Positives = 82/129 (64%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E AA    +TKTLRFYE+ GLLPP  R  +GYR+YG E + RL FI RG+AAGL L
Sbjct  1    MRIGEAAAAAGMTTKTLRFYEDRGLLPPAHRATNGYRDYGGEAITRLEFIRRGRAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++  IL + D G APC HVR LL+ ++ ++ AQIAEL AL   +    D A+ G P + 
Sbjct  61   AQISDILTVRDHGTAPCTHVRDLLARQLADLDAQIAELTALRAAVAEFHDTAAAGDPRKC  120

Query  121  DHSTVCWIL  129
            D   +C  L
Sbjct  121  DPDQICSYL  129


>gi|325965373|ref|YP_004243278.1| MerR family transcriptional regulator [Arthrobacter phenanthrenivorans 
Sphe3]
 gi|325965450|ref|YP_004243355.1| transcriptional regulator [Arthrobacter phenanthrenivorans Sphe3]
 gi|323471460|gb|ADX75144.1| putative transcriptional regulator [Arthrobacter phenanthrenivorans 
Sphe3]
 gi|323471537|gb|ADX75221.1| putative transcriptional regulator [Arthrobacter phenanthrenivorans 
Sphe3]
Length=130

 Score =  126 bits (317),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 64/129 (50%), Positives = 87/129 (68%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E AA    +TKTLRFYE+SGLLP   R+++GYR+Y  + V RL FI RG+AAGLAL
Sbjct  2    MRIGEAAAAAGMTTKTLRFYEDSGLLPAAKRSSNGYRDYHDDSVARLEFIRRGRAAGLAL  61

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++R+IL++ D GEAPCAHV+ LLS ++ E+  QI+EL+AL   +  L   A+ G     
Sbjct  62   TQIREILSLRDAGEAPCAHVQDLLSNQLAELDHQISELMALRSIVAGLHATAASGTDASC  121

Query  121  DHSTVCWIL  129
            D   +C  L
Sbjct  122  DPEQICSYL  130


>gi|116670334|ref|YP_831267.1| MerR family transcriptional regulator [Arthrobacter sp. FB24]
 gi|116610443|gb|ABK03167.1| transcriptional regulator, MerR family [Arthrobacter sp. FB24]
Length=145

 Score =  126 bits (316),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 64/129 (50%), Positives = 87/129 (68%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E AA    +TKTLRFYE+SGLLP   R+++GYR+Y  + V RL FI RG+AAGLAL
Sbjct  17   MRIGEAAAAAGMTTKTLRFYEDSGLLPAAKRSSNGYRDYHDDSVARLEFIRRGRAAGLAL  76

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++R+IL++ D GEAPCAHV+ LLS ++ E+  QI+EL+AL   +  L   A+ G     
Sbjct  77   TQIREILSLRDAGEAPCAHVQDLLSNQLAELDHQISELMALRSIVAGLHATAASGTDASC  136

Query  121  DHSTVCWIL  129
            D   +C  L
Sbjct  137  DPEQICSYL  145


>gi|326331455|ref|ZP_08197745.1| Cd(II)/Pb(II)-responsive transcriptional regulator [Nocardioidaceae 
bacterium Broad-1]
 gi|325950711|gb|EGD42761.1| Cd(II)/Pb(II)-responsive transcriptional regulator [Nocardioidaceae 
bacterium Broad-1]
Length=129

 Score =  125 bits (315),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 63/129 (49%), Positives = 81/129 (63%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    +  KTLRFYE  GLLPP  RT+SGYR+Y  + + R+ FIHRGQAAGL L
Sbjct  1    MRIGELAEAAGSKAKTLRFYEERGLLPPAERTSSGYRDYTADAIARVDFIHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             +++QIL I D G+APC HV  LL +R+ E+  QIA+L AL   +  L D A+   P   
Sbjct  61   AQIKQILDIRDHGQAPCEHVLDLLDSRLSEIEEQIAQLDALRETIAALRDGAADPDPESC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  GSDLVCRYL  129


>gi|116662160|ref|YP_829215.1| MerR family transcriptional regulator [Arthrobacter sp. FB24]
 gi|116662259|ref|YP_829313.1| MerR family transcriptional regulator [Arthrobacter sp. FB24]
 gi|116662364|ref|YP_829417.1| MerR family transcriptional regulator [Arthrobacter sp. FB24]
 gi|116612912|gb|ABK05634.1| transcriptional regulator, MerR family [Arthrobacter sp. FB24]
 gi|116613023|gb|ABK05732.1| transcriptional regulator, MerR family [Arthrobacter sp. FB24]
 gi|116613143|gb|ABK05836.1| transcriptional regulator, MerR family [Arthrobacter sp. FB24]
Length=130

 Score =  125 bits (313),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 66/113 (59%), Positives = 82/113 (73%), Gaps = 0/113 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            MKI +VA  T T+TKTLRFYE  GLLPP  RTASGYR+Y  ++V R+ FIHRGQAAGL L
Sbjct  1    MKIGQVAETTGTTTKTLRFYEAEGLLPPAERTASGYRDYSEDVVGRIGFIHRGQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHAS  113
             ++RQIL I DRG+ PC+HVR+LL  R+ E+ AQ  EL+AL   +  L   A+
Sbjct  61   AQIRQILNIRDRGQTPCSHVRELLGQRLTELDAQTTELLALRETISQLYAQAA  113


>gi|319947649|ref|ZP_08021870.1| putative transcriptional regulator [Dietzia cinnamea P4]
 gi|319438678|gb|EFV93577.1| putative transcriptional regulator [Dietzia cinnamea P4]
Length=129

 Score =  123 bits (308),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 62/129 (49%), Positives = 82/129 (64%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+AA   T+ KTLR+YE+ GLLPPP RT +GYR+Y   ++ RL FI RGQ+AGL+L
Sbjct  1    MRIGELAATAGTTPKTLRYYESVGLLPPPQRTLNGYRDYPEHVISRLDFIRRGQSAGLSL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
              + +IL I D G+APCAHV  LL TR+DE+  QIA+L+ L   +  L        P   
Sbjct  61   ARIGEILRIRDDGQAPCAHVDTLLVTRLDEIDQQIADLLQLRQAVAQLQSANRTVDPATC  120

Query  121  DHSTVCWIL  129
               T+C  L
Sbjct  121  QAETICRYL  129


>gi|325066717|ref|ZP_08125390.1| putative transcriptional regulator [Actinomyces oris K20]
Length=129

 Score =  123 bits (308),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 61/129 (48%), Positives = 80/129 (63%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+TKTLRFYE+ GLLPP  RT  GYR+Y  E + R+ FIHRGQA GL+L
Sbjct  1    MRIGELAEAAGTTTKTLRFYEDQGLLPPAERTPGGYRDYTTESLTRIDFIHRGQAVGLSL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQ+L I D G+APC HVR LL  R+ ++  ++ +L  L   L  L D A +  P   
Sbjct  61   AQIRQVLDIRDHGQAPCDHVRDLLDARLTDIDLKLRQLHDLRDTLAGLRDQAEHVEPDTC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  SSDQVCRYL  129


>gi|332672148|ref|YP_004455156.1| MerR family transcriptional regulator [Cellulomonas fimi ATCC 
484]
 gi|332341186|gb|AEE47769.1| transcriptional regulator, MerR family [Cellulomonas fimi ATCC 
484]
Length=129

 Score =  123 bits (308),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 65/129 (51%), Positives = 82/129 (64%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E+A    T+TKTLR+YE   LLP PARTA+GYR+Y    V RL FI R QAAGL L
Sbjct  1    MRIGELARAGGTTTKTLRYYETVALLPAPARTAAGYRDYDATTVARLDFIRRSQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++R++L + D G APC HV +LL  R+ E+  QIA+L AL   +  L D AS   P   
Sbjct  61   AQIREVLQVRDAGTAPCHHVHELLDRRVHELDRQIADLQALRLTVAELRDSASEADPETC  120

Query  121  DHSTVCWIL  129
            + STVC  L
Sbjct  121  NPSTVCRYL  129


>gi|119715881|ref|YP_922846.1| MerR family transcriptional regulator [Nocardioides sp. JS614]
 gi|119536542|gb|ABL81159.1| transcriptional regulator, MerR family [Nocardioides sp. JS614]
Length=133

 Score =  118 bits (295),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 60/132 (46%), Positives = 79/132 (60%), Gaps = 0/132 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M I ++A     + +T+RFYE  GLLP P R A+GYR YG + + RLRFI   QA+GL L
Sbjct  1    MLIGQLADAAGVTAQTIRFYERDGLLPRPPREANGYRVYGGDTLGRLRFIRSAQASGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             E+R I+ + D G  PC HV  LL+ R+DEV A++ EL AL G L+ LL       P + 
Sbjct  61   AEIRGIVDLRDAGTVPCTHVTTLLAARLDEVHARVRELEALAGELERLLTRGDRLDPADC  120

Query  121  DHSTVCWILESD  132
              + VC IL  D
Sbjct  121  GDAAVCHILVGD  132


>gi|88855153|ref|ZP_01129818.1| putative transcriptional regulator (MerR family) protein [marine 
actinobacterium PHSC20C1]
 gi|88815681|gb|EAR25538.1| putative transcriptional regulator (MerR family) protein [marine 
actinobacterium PHSC20C1]
Length=132

 Score =  114 bits (284),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 56/129 (44%), Positives = 78/129 (61%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M I EVA   +    T+RFYE  GLLP P R  +GYR+Y P +VDR+ FI   QAAGL L
Sbjct  1    MLIGEVADRLDVPRHTIRFYEKQGLLPEPQRQGNGYRDYDPAVVDRVTFIRNSQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             E+  IL++ D GEAPC HV  LL  +++ V+ ++ +L ALE  L+ L+  A    P + 
Sbjct  61   SEIMSILSLRDAGEAPCTHVSSLLEHKLEGVQERLKDLAALETELKQLIHEAQGLDPAKC  120

Query  121  DHSTVCWIL  129
              + +C I+
Sbjct  121  TEAEICTII  129


>gi|88856549|ref|ZP_01131206.1| putative transcriptional regulator (MerR family) protein [marine 
actinobacterium PHSC20C1]
 gi|88814203|gb|EAR24068.1| putative transcriptional regulator (MerR family) protein [marine 
actinobacterium PHSC20C1]
Length=132

 Score =  113 bits (282),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 57/129 (45%), Positives = 78/129 (61%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I EVA       +T+RFYE  GLLP P R ++GYR+Y   ++ RL FI  GQ AGL L
Sbjct  1    MRIGEVANTAGLPAQTIRFYERRGLLPQPQRDSNGYRSYDSTVLSRLGFIRNGQGAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             E+  +L +   G +PCAHVR LLS ++ +VR +  EL ALEG L+TL+  +    P   
Sbjct  61   LEIATVLELRGDGLSPCAHVRDLLSEKLHDVRRRQTELAALEGELETLIGRSERLDPAHC  120

Query  121  DHSTVCWIL  129
              S +C I+
Sbjct  121  TDSEICHII  129


>gi|119952468|ref|YP_950109.1| MerR family transcriptional regulator [Arthrobacter aurescens 
TC1]
 gi|42558679|gb|AAS20019.1| transcriptional regulator [Arthrobacter aurescens]
 gi|119951598|gb|ABM10508.1| putative Transcriptional regulator, MerR family [Arthrobacter 
aurescens TC1]
Length=183

 Score =  112 bits (280),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 55/126 (44%), Positives = 73/126 (58%), Gaps = 0/126 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E AA    +TKT+RFYEN GLLPP  R+A+GYR YG + + RL FI R Q AGL L
Sbjct  55   MRIGEAAAAVGMTTKTIRFYENRGLLPPAERSANGYREYGRDTISRLEFIRRSQIAGLTL  114

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             +++ IL I D G  PC HVR +L  ++ ++  +IAEL AL   +           P   
Sbjct  115  AQIQGILQIRDNGITPCTHVRDVLGKQLIDLDRKIAELTALRATVAEQYAFVEAADPRNC  174

Query  121  DHSTVC  126
            D   +C
Sbjct  175  DAEQIC  180


>gi|119489599|ref|ZP_01622359.1| Transcriptional Regulator, MerR family protein [Lyngbya sp. PCC 
8106]
 gi|119454511|gb|EAW35659.1| Transcriptional Regulator, MerR family protein [Lyngbya sp. PCC 
8106]
Length=141

 Score =  111 bits (277),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 53/127 (42%), Positives = 78/127 (62%), Gaps = 1/127 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPA-RTASGYRNYGPEIVDRLRFIHRGQAAGLA  59
            +KI EVA+L+  S KT+R+YE+ GLL P   R+ SGYR +   ++ RL F+ R ++ GL+
Sbjct  10   LKIGEVASLSGLSVKTIRYYEDIGLLSPTVERSESGYRLFNSLVLTRLSFVKRAKSLGLS  69

Query  60   LQEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTE  119
            L E+R+IL I D G+ PC  V+Q L ++++ +  QIA L  L G L+ LL H    P   
Sbjct  70   LSEIREILEIRDLGQLPCGEVKQCLLSKVEAINQQIAALEILRGELKELLAHWQEQPSAS  129

Query  120  HDHSTVC  126
                T+C
Sbjct  130  QAAQTIC  136


>gi|86608567|ref|YP_477329.1| MerR family transcriptional regulator [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557109|gb|ABD02066.1| transcriptional regulator, MerR family [Synechococcus sp. JA-2-3B'a(2-13)]
Length=159

 Score =  110 bits (276),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 55/132 (42%), Positives = 80/132 (61%), Gaps = 1/132 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPA-RTASGYRNYGPEIVDRLRFIHRGQAAGLA  59
            +KI +VA     S +T+R+YE+ GLL P   R  S YR + P ++ RL FI R Q+ GL+
Sbjct  5    LKIGQVALAAGLSVRTVRYYESIGLLKPTVERAESSYRLFDPSVLVRLAFIRRCQSLGLS  64

Query  60   LQEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTE  119
            L+E+RQIL +HDRGE PC  +RQ L  ++ E+  +IA+L AL+  +Q LL      P   
Sbjct  65   LEEIRQILDVHDRGEQPCPEIRQHLQGKLQEIEQRIADLQALKSQIQGLLSDWQITPAAA  124

Query  120  HDHSTVCWILES  131
             +   +C IL+ 
Sbjct  125  DEKEVICPILQK  136


>gi|209525139|ref|ZP_03273683.1| transcriptional regulator, MerR family [Arthrospira maxima CS-328]
 gi|284052211|ref|ZP_06382421.1| transcriptional regulator, MerR family protein [Arthrospira platensis 
str. Paraca]
 gi|209494548|gb|EDZ94859.1| transcriptional regulator, MerR family [Arthrospira maxima CS-328]
 gi|291570423|dbj|BAI92695.1| MerR family transcriptional regulator [Arthrospira platensis 
NIES-39]
Length=140

 Score =  110 bits (276),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 55/127 (44%), Positives = 76/127 (60%), Gaps = 1/127 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPA-RTASGYRNYGPEIVDRLRFIHRGQAAGLA  59
            +KI EVAA +  S KT+R+Y++ GLL P   R+ SGYR + PE++ RL FI R Q  GL+
Sbjct  7    LKIGEVAAESGLSVKTIRYYDDIGLLWPTVDRSRSGYRLFAPEVLTRLAFIKRAQGLGLS  66

Query  60   LQEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTE  119
            L E+ +IL I DRG+ PC  V+Q L  ++ ++  QI  L  L+G LQ LL      P   
Sbjct  67   LAEIAEILKIRDRGDIPCDQVKQRLQAKVADINQQIIALEGLKGELQELLSQWEDQPSAS  126

Query  120  HDHSTVC  126
                T+C
Sbjct  127  RMADTIC  133


>gi|84496051|ref|ZP_00994905.1| putative transcriptional regulator, MerR family protein [Janibacter 
sp. HTCC2649]
 gi|84382819|gb|EAP98700.1| putative transcriptional regulator, MerR family protein [Janibacter 
sp. HTCC2649]
Length=133

 Score =  110 bits (276),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 57/129 (45%), Positives = 75/129 (59%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M I E+A      T+T+RFYE  GLLP P R A+GYRNY    + RL FI   QAAGL L
Sbjct  1    MLIGELAEAVALPTQTIRFYERKGLLPDPERGANGYRNYDGSTLTRLYFIGAAQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             E+  I+ + D G APC HV  L+  ++  VRA+IA L+ALE  L  L++ +    P + 
Sbjct  61   AEIGSIIELRDDGTAPCTHVAGLIENKLSTVRARIATLVALEAELDGLVERSHRLDPADC  120

Query  121  DHSTVCWIL  129
                +C IL
Sbjct  121  SDGEICHIL  129


>gi|294631661|ref|ZP_06710221.1| Cd(II)/Pb(II)-responsive transcriptional regulator [Streptomyces 
sp. e14]
 gi|292834994|gb|EFF93343.1| Cd(II)/Pb(II)-responsive transcriptional regulator [Streptomyces 
sp. e14]
Length=134

 Score =  110 bits (275),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 55/130 (43%), Positives = 78/130 (60%), Gaps = 0/130 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I ++A  T  +TKT+RFYE+SGLLP P RT  GYR+Y      RL FI   Q AGL L
Sbjct  1    MRIGDLATHTGLTTKTIRFYEDSGLLPAPPRTPGGYRDYPDHTATRLAFIRDAQRAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             E+R +LA+ D G APC HV +L+   +D++  ++A+L+A    L+ L   A+   P   
Sbjct  61   AEIRSVLALRDDGHAPCTHVTRLIHGHLDDIDRRMADLVATREALRDLAGRAATTDPAAC  120

Query  121  DHSTVCWILE  130
                +C IL+
Sbjct  121  GADDICTILK  130


>gi|227503931|ref|ZP_03933980.1| MerR family transcriptional regulator [Corynebacterium striatum 
ATCC 6940]
 gi|227199554|gb|EEI79602.1| MerR family transcriptional regulator [Corynebacterium striatum 
ATCC 6940]
Length=129

 Score =  108 bits (270),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 54/126 (43%), Positives = 74/126 (59%), Gaps = 0/126 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I EVA     +TKT+RFYE+ GLLPP  R+A+GYR+Y  + + RL FI R Q AGL L
Sbjct  1    MRIGEVADAAGITTKTIRFYEDRGLLPPAERSANGYRDYTHDTLSRLEFIRRSQVAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             +++ IL I D G  PC HVR +L  ++ ++  +IAEL AL   +      A    P   
Sbjct  61   AQIQGILRIRDSGLTPCTHVRDVLGKQLQDLDRKIAELTALRVTVAEQYATAEVADPQRC  120

Query  121  DHSTVC  126
            D   +C
Sbjct  121  DAEQIC  126


>gi|334117896|ref|ZP_08491987.1| transcriptional regulator, MerR family [Microcoleus vaginatus 
FGP-2]
 gi|333461005|gb|EGK89613.1| transcriptional regulator, MerR family [Microcoleus vaginatus 
FGP-2]
Length=142

 Score =  108 bits (269),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 54/132 (41%), Positives = 79/132 (60%), Gaps = 1/132 (0%)

Query  2    KISEVAALTNTSTKTLRFYENSGLLPPPA-RTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            KI  VAA +  S KT+R+YE  GLL P   R+ +GYR +G  + +RL FI R Q  GL+L
Sbjct  11   KIGSVAACSGLSVKTVRYYEEMGLLSPAVKRSPAGYRLFGETVFNRLAFIKRSQTLGLSL  70

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
            QE++ IL + DRGE PC+  +Q L+ +++E+  QIA L  L+  LQ +L+     P    
Sbjct  71   QEIKDILQVRDRGELPCSEAKQHLTAKVEEISVQIAALETLKRELQGILNCWQEQPSQAS  130

Query  121  DHSTVCWILESD  132
               T+C  ++ D
Sbjct  131  ITRTICPNIQRD  142


>gi|145223799|ref|YP_001134477.1| MerR family transcriptional regulator [Mycobacterium gilvum PYR-GCK]
 gi|315444093|ref|YP_004076972.1| transcriptional regulator [Mycobacterium sp. Spyr1]
 gi|145216285|gb|ABP45689.1| putative transcriptional regulator, MerR family [Mycobacterium 
gilvum PYR-GCK]
 gi|315262396|gb|ADT99137.1| predicted transcriptional regulator [Mycobacterium sp. Spyr1]
Length=129

 Score =  107 bits (266),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 57/129 (45%), Positives = 78/129 (61%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I ++A  T  +T TLR+YE+ GLLPP  R+ +GYR+Y  + + R+ FI RGQAAG +L
Sbjct  1    MRIGKLAEATGATTATLRYYEDEGLLPPAERSPAGYRDYAADTIARVGFIRRGQAAGFSL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             ++RQIL I D G APC HVR LL  R+ ++  QI+ L+AL   +  L   A    P   
Sbjct  61   AQIRQILDIRDSGHAPCTHVRDLLDIRLTDLDEQISALVALRETIARLRQGAESVDPESC  120

Query  121  DHSTVCWIL  129
                VC  L
Sbjct  121  SADDVCRYL  129


>gi|292491738|ref|YP_003527177.1| transcription regulator MerR DNA binding protein [Nitrosococcus 
halophilus Nc4]
 gi|291580333|gb|ADE14790.1| Transcription regulator MerR DNA binding protein [Nitrosococcus 
halophilus Nc4]
Length=146

 Score =  106 bits (265),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 52/131 (40%), Positives = 75/131 (58%), Gaps = 1/131 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M I ++A L   + +T+R+YE  GLLPPP RT +GYR Y  + ++RLRFI + QA G +L
Sbjct  7    MFIGKLAQLVEVNVQTIRYYERIGLLPPPTRTKNGYRVYNEKALNRLRFIKQAQALGFSL  66

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             E++ ILA+   G+ PC  VRQ    ++ EV  ++ EL      L  L+ H    P    
Sbjct  67   AEIKTILALSTTGQCPCPQVRQFAKAKLWEVDQKLKELFTYRQTLAGLIRHWDRTPDKAS  126

Query  121  DHSTVCWILES  131
            D   VC ++ES
Sbjct  127  DE-VVCTLIES  136


>gi|219883294|ref|YP_002478455.1| transcriptional regulator, MerR family [Arthrobacter chlorophenolicus 
A6]
 gi|219862139|gb|ACL42479.1| transcriptional regulator, MerR family [Arthrobacter chlorophenolicus 
A6]
Length=129

 Score =  105 bits (263),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 50/101 (50%), Positives = 68/101 (68%), Gaps = 0/101 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I E AA    +TK +RFYE+ GLLPP  R+A+GYR Y  + V RL FI R Q AGL+L
Sbjct  1    MRIGEAAAAVGMTTKAIRFYEDRGLLPPAERSANGYREYADDTVSRLEFIRRSQVAGLSL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIAL  101
             +++ IL I D G  PCAHV  +L+ ++ ++  QIAE+ AL
Sbjct  61   AQIQGILRIRDSGATPCAHVSDVLARQLMDLDRQIAEITAL  101


>gi|86606208|ref|YP_474971.1| MerR family transcriptional regulator [Synechococcus sp. JA-3-3Ab]
 gi|86554750|gb|ABC99708.1| transcriptional regulator, MerR family [Synechococcus sp. JA-3-3Ab]
Length=155

 Score =  105 bits (261),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 55/133 (42%), Positives = 86/133 (65%), Gaps = 3/133 (2%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPA-RTASGYRNYGPEIVDRLRFIHRGQAAGLA  59
            M+IS+VAA+     +T+R+YE+ GLL P   R+ S YR + P ++ RL FI R Q+ GL+
Sbjct  1    MRISQVAAVAGLPVRTVRYYESLGLLKPTVQRSESSYRLFHPAVLGRLAFIRRCQSLGLS  60

Query  60   LQEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLL-DHASYGPPT  118
            L+E+RQIL ++DRGE PC  +RQ L  ++ ++  ++AEL  L+G +++LL D      PT
Sbjct  61   LEEIRQILQLYDRGEQPCPEIRQHLQEKLWQIEERMAELQTLKGQIESLLSDWRIPAEPT  120

Query  119  EHDHSTVCWILES  131
              +   +C IL+ 
Sbjct  121  AQE-DVICPILQK  132


>gi|220908114|ref|YP_002483425.1| MerR family transcriptional regulator [Cyanothece sp. PCC 7425]
 gi|219864725|gb|ACL45064.1| transcriptional regulator, MerR family [Cyanothece sp. PCC 7425]
Length=150

 Score =  104 bits (259),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 53/132 (41%), Positives = 78/132 (60%), Gaps = 1/132 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPP-PARTASGYRNYGPEIVDRLRFIHRGQAAGLA  59
            ++I EVA  +    KT+R+YE+ GLL P   R+ +GYR + P++++RL FI R Q  GL 
Sbjct  16   LQIGEVAKRSGLPVKTIRYYEDIGLLKPLVVRSPTGYRLFQPQVLNRLAFIKRAQGLGLN  75

Query  60   LQEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTE  119
            L E+ +ILA+HDRGE PC  ++  L  R+  +  QI  L  L+  L+ +L      PP E
Sbjct  76   LAEIGEILAVHDRGELPCGQIKDKLQARLGAIAEQIHSLTTLQVELEGILSAWQDQPPPE  135

Query  120  HDHSTVCWILES  131
                T+C  L+S
Sbjct  136  LRAQTICPNLQS  147


>gi|269839487|ref|YP_003324179.1| MerR family transcriptional regulator [Thermobaculum terrenum 
ATCC BAA-798]
 gi|269791217|gb|ACZ43357.1| transcriptional regulator, MerR family [Thermobaculum terrenum 
ATCC BAA-798]
Length=137

 Score =  102 bits (253),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 51/130 (40%), Positives = 79/130 (61%), Gaps = 3/130 (2%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            ++I ++AA    + KT+R+YE  GLLP   RT SGYR YGP  V+RLRF+ + +A GL+L
Sbjct  6    LRIGDLAAELGLNPKTIRYYEQIGLLPAAPRTESGYRVYGPGDVERLRFVLKAKAVGLSL  65

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
            +E+++IL +   G+ PC HV  LL  +I  V  Q+  L ++   L  L D A+    T  
Sbjct  66   KEIKEILLLQQSGQQPCEHVLALLDRKITAVEQQLLALTSIRQELVALRDQAA---QTMG  122

Query  121  DHSTVCWILE  130
            + + +C ++E
Sbjct  123  NETCICGLIE  132


>gi|325001064|ref|ZP_08122176.1| putative transcriptional regulator [Pseudonocardia sp. P1]
Length=144

 Score =  102 bits (253),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 50/129 (39%), Positives = 74/129 (58%), Gaps = 0/129 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+I ++A  +  +TKT+RFYE +GLLP P RT +GYR+Y  +   RL FI   Q AGL L
Sbjct  1    MRIGDLATASGLTTKTIRFYEQAGLLPAPPRTPNGYRDYPEQTPARLTFIRDAQGAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTLLDHASYGPPTEH  120
             E+R +L + + G+APCAHV  L+   + ++  ++ EL      L+ L   A+   P   
Sbjct  61   AEIRSVLVLREGGQAPCAHVTTLIDQHLADIERRLTELATTRDALRGLAHRAATTDPAAC  120

Query  121  DHSTVCWIL  129
                +C IL
Sbjct  121  TEDDICTIL  129


>gi|329940437|ref|ZP_08289718.1| MerR family transcriptional regulator [Streptomyces griseoaurantiacus 
M045]
 gi|329300498|gb|EGG44395.1| MerR family transcriptional regulator [Streptomyces griseoaurantiacus 
M045]
Length=113

 Score =  101 bits (251),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 50/108 (47%), Positives = 67/108 (63%), Gaps = 0/108 (0%)

Query  1    MKISEVAALTNTSTKTLRFYENSGLLPPPARTASGYRNYGPEIVDRLRFIHRGQAAGLAL  60
            M+IS +A +T  + KT+R+YE SGLLP P RTA GYR+Y PE   RL FI   QAAGL L
Sbjct  1    MRISTLATVTGLTAKTIRYYEQSGLLPAPPRTAGGYRDYPPEAQPRLTFIRDAQAAGLTL  60

Query  61   QEVRQILAIHDRGEAPCAHVRQLLSTRIDEVRAQIAELIALEGHLQTL  108
             E+R +LA+ D G+APC H   L+   +  +  +I  L   +  L+ L
Sbjct  61   AEIRGVLALRDSGQAPCPHAAALIEAHLRHIDERITALARTQAALRQL  108



Lambda     K      H
   0.318    0.134    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 127605758688


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40