BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3335c Length=289 Score E Sequences producing significant alignments: (Bits) Value gi|15610471|ref|NP_217852.1| integral membrane protein [Mycobact... 562 2e-158 gi|148824541|ref|YP_001289295.1| integral membrane protein [Myco... 561 4e-158 gi|121639264|ref|YP_979488.1| putative integral membrane protein... 560 7e-158 gi|339633347|ref|YP_004724989.1| hypothetical protein MAF_33510 ... 560 8e-158 gi|340628320|ref|YP_004746772.1| putative integral membrane prot... 558 5e-157 gi|342861556|ref|ZP_08718203.1| hypothetical protein MCOL_21826 ... 402 3e-110 gi|183981211|ref|YP_001849502.1| integral membrane protein [Myco... 402 3e-110 gi|118617113|ref|YP_905445.1| integral membrane protein [Mycobac... 402 3e-110 gi|254776742|ref|ZP_05218258.1| hypothetical protein MaviaA2_190... 401 8e-110 gi|41409550|ref|NP_962386.1| hypothetical protein MAP3452c [Myco... 400 9e-110 gi|254820253|ref|ZP_05225254.1| hypothetical protein MintA_10011... 399 2e-109 gi|240169089|ref|ZP_04747748.1| integral membrane protein [Mycob... 396 2e-108 gi|15827290|ref|NP_301553.1| hypothetical protein ML0687 [Mycoba... 390 8e-107 gi|296168848|ref|ZP_06850520.1| ribonuclease [Mycobacterium para... 379 2e-103 gi|333991798|ref|YP_004524412.1| hypothetical protein JDM601_315... 350 1e-94 gi|126433842|ref|YP_001069533.1| putative ribonuclease [Mycobact... 331 9e-89 gi|108798184|ref|YP_638381.1| hypothetical protein Mmcs_1213 [My... 327 1e-87 gi|145225446|ref|YP_001136124.1| putative ribonuclease [Mycobact... 326 2e-87 gi|120402568|ref|YP_952397.1| putative ribonuclease [Mycobacteri... 311 5e-83 gi|118472662|ref|YP_886035.1| ribonuclease [Mycobacterium smegma... 311 6e-83 gi|169630761|ref|YP_001704410.1| hypothetical protein MAB_3682c ... 308 9e-82 gi|226365710|ref|YP_002783493.1| ribonuclease [Rhodococcus opacu... 253 2e-65 gi|312140774|ref|YP_004008110.1| ribonuclease bn [Rhodococcus eq... 243 2e-62 gi|325675586|ref|ZP_08155270.1| tRNA-processing ribonuclease BN ... 243 3e-62 gi|229489464|ref|ZP_04383327.1| putative ribonuclease [Rhodococc... 241 7e-62 gi|226305498|ref|YP_002765458.1| hypothetical protein RER_20110 ... 241 1e-61 gi|333921636|ref|YP_004495217.1| putative ribonuclease [Amycolic... 241 1e-61 gi|111023205|ref|YP_706177.1| tRNA-processing ribonuclease BN [R... 229 2e-58 gi|262201713|ref|YP_003272921.1| ribonuclease BN [Gordonia bronc... 228 1e-57 gi|296138679|ref|YP_003645922.1| ribonuclease [Tsukamurella paur... 227 1e-57 gi|343926634|ref|ZP_08766132.1| putative ribonuclease [Gordonia ... 223 2e-56 gi|331699049|ref|YP_004335288.1| ribonuclease [Pseudonocardia di... 219 4e-55 gi|54022904|ref|YP_117146.1| hypothetical protein nfa9370 [Nocar... 217 2e-54 gi|256380456|ref|YP_003104116.1| ribonuclease [Actinosynnema mir... 216 3e-54 gi|317509129|ref|ZP_07966755.1| ribonuclease BN family protein [... 209 5e-52 gi|300857884|ref|YP_003782867.1| hypothetical protein cpfrc_0046... 205 6e-51 gi|302205611|gb|ADL09953.1| Ribonuclease BN-like family [Coryneb... 204 1e-50 gi|134103022|ref|YP_001108683.1| tRNA-processing ribonuclease BN... 204 2e-50 gi|213964986|ref|ZP_03393185.1| putative ribonuclease [Corynebac... 203 3e-50 gi|334564379|ref|ZP_08517370.1| hypothetical protein CbovD2_0737... 203 3e-50 gi|336326328|ref|YP_004606294.1| hypothetical protein CRES_1778 ... 198 9e-49 gi|337290133|ref|YP_004629154.1| hypothetical protein CULC22_005... 197 2e-48 gi|227486998|ref|ZP_03917314.1| ribonuclease [Corynebacterium gl... 197 2e-48 gi|324999564|ref|ZP_08120676.1| tRNA-processing ribonuclease BN ... 197 2e-48 gi|227541839|ref|ZP_03971888.1| ribonuclease [Corynebacterium gl... 197 2e-48 gi|19551908|ref|NP_599910.1| hypothetical protein NCgl0648 [Cory... 196 3e-48 gi|237786124|ref|YP_002906829.1| hypothetical protein ckrop_1558... 196 3e-48 gi|260579132|ref|ZP_05847024.1| ribonuclease [Corynebacterium je... 195 7e-48 gi|68536778|ref|YP_251483.1| hypothetical protein jk1688 [Coryne... 195 7e-48 gi|38233243|ref|NP_939010.1| hypothetical protein DIP0636 [Coryn... 191 2e-46 >gi|15610471|ref|NP_217852.1| integral membrane protein [Mycobacterium tuberculosis H37Rv] gi|15842932|ref|NP_337969.1| hypothetical protein MT3439 [Mycobacterium tuberculosis CDC1551] gi|31794520|ref|NP_857013.1| integral membrane protein [Mycobacterium bovis AF2122/97] 69 more sequence titles Length=289 Score = 562 bits (1449), Expect = 2e-158, Method: Compositional matrix adjust. Identities = 289/289 (100%), Positives = 289/289 (100%), Gaps = 0/289 (0%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV Sbjct 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW Sbjct 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 Query 121 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW 180 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW Sbjct 121 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW 180 Query 181 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF Sbjct 181 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 Query 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA Sbjct 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 >gi|148824541|ref|YP_001289295.1| integral membrane protein [Mycobacterium tuberculosis F11] gi|148723068|gb|ABR07693.1| conserved integral membrane protein [Mycobacterium tuberculosis F11] Length=289 Score = 561 bits (1446), Expect = 4e-158, Method: Compositional matrix adjust. Identities = 288/289 (99%), Positives = 289/289 (100%), Gaps = 0/289 (0%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 MG+LAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV Sbjct 1 MGDLAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW Sbjct 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 Query 121 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW 180 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW Sbjct 121 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW 180 Query 181 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF Sbjct 181 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 Query 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA Sbjct 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 >gi|121639264|ref|YP_979488.1| putative integral membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991761|ref|YP_002646450.1| putative integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121494912|emb|CAL73395.1| Probable conserved integral membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774876|dbj|BAH27682.1| putative integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341603289|emb|CCC65967.1| probable conserved integral membrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=289 Score = 560 bits (1444), Expect = 7e-158, Method: Compositional matrix adjust. Identities = 288/289 (99%), Positives = 288/289 (99%), Gaps = 0/289 (0%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV Sbjct 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 GGFALSRRPELLTTLEERIRTSVSG VGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW Sbjct 61 GGFALSRRPELLTTLEERIRTSVSGVVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 Query 121 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW 180 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW Sbjct 121 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW 180 Query 181 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF Sbjct 181 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 Query 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA Sbjct 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 >gi|339633347|ref|YP_004724989.1| hypothetical protein MAF_33510 [Mycobacterium africanum GM041182] gi|339332703|emb|CCC28421.1| putative conserved integral membrane protein [Mycobacterium africanum GM041182] Length=289 Score = 560 bits (1443), Expect = 8e-158, Method: Compositional matrix adjust. Identities = 288/289 (99%), Positives = 288/289 (99%), Gaps = 0/289 (0%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDR GSLFAAGLTYYTIFAIFPLLMVGFGV Sbjct 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRKGSLFAAGLTYYTIFAIFPLLMVGFGV 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW Sbjct 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 Query 121 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW 180 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW Sbjct 121 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW 180 Query 181 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF Sbjct 181 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 Query 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA Sbjct 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 >gi|340628320|ref|YP_004746772.1| putative integral membrane protein [Mycobacterium canettii CIPT 140010059] gi|340006510|emb|CCC45694.1| putative conserved integral membrane protein [Mycobacterium canettii CIPT 140010059] Length=289 Score = 558 bits (1437), Expect = 5e-157, Method: Compositional matrix adjust. Identities = 286/289 (99%), Positives = 288/289 (99%), Gaps = 0/289 (0%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 MGELAEPGVLDRLRARFGWLDHV+RAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV Sbjct 1 MGELAEPGVLDRLRARFGWLDHVMRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 GGFALSRRPELLTTLEERIRTSVSG VGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW Sbjct 61 GGFALSRRPELLTTLEERIRTSVSGDVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 Query 121 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW 180 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW Sbjct 121 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW 180 Query 181 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 LEIPQFSVFDEIFRGISVLVSVLVSW+LFTWMIGRLPREPVGLVTAARAGLMAAVGFELF Sbjct 181 LEIPQFSVFDEIFRGISVLVSVLVSWLLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 Query 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA Sbjct 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 >gi|342861556|ref|ZP_08718203.1| hypothetical protein MCOL_21826 [Mycobacterium colombiense CECT 3035] gi|342131045|gb|EGT84334.1| hypothetical protein MCOL_21826 [Mycobacterium colombiense CECT 3035] Length=342 Score = 402 bits (1034), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 197/289 (69%), Positives = 239/289 (83%), Gaps = 1/289 (0%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 M E A+PG DRLRAR+GW+DHV+RA+ RF++RNG FAAGLTYYTIFA+FPLLMVGF V Sbjct 1 MSEPAKPGFFDRLRARYGWIDHVIRAYQRFDERNGGFFAAGLTYYTIFALFPLLMVGFAV 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 GF L+RRPELL+T+++ IR+ V+G +G QL +LMNSAIDAR SVGVIGLATA W GLGW Sbjct 61 FGFVLARRPELLSTIDDHIRSQVTGTLGNQLQELMNSAIDARTSVGVIGLATAVWAGLGW 120 Query 121 MWHLREALSQMW-AHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLR 179 + HLR+AL++MW + G++R K SDL AMVGTF VIVAT+ALT +GHA PM A+L+ Sbjct 121 ISHLRQALTEMWWDEQIESPGFVRNKFSDLLAMVGTFAVIVATVALTTVGHAVPMRALLK 180 Query 180 WLEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFEL 239 WL IPQF VFD +F S+L+ LVSW+LFTWMI RLPRE V LV + RAGL+AA+GFE+ Sbjct 181 WLGIPQFVVFDWLFWLFSILIGTLVSWLLFTWMIARLPREKVSLVDSMRAGLIAAIGFEV 240 Query 240 FKQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 FKQV +IYL+ VLRSPAGA FGPVLGLMVFA++TA+L+LF TAWAATAS Sbjct 241 FKQVASIYLKTVLRSPAGAAFGPVLGLMVFAYITAYLVLFCTAWAATAS 289 >gi|183981211|ref|YP_001849502.1| integral membrane protein [Mycobacterium marinum M] gi|183174537|gb|ACC39647.1| conserved integral membrane protein [Mycobacterium marinum M] Length=342 Score = 402 bits (1034), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 199/286 (70%), Positives = 236/286 (83%), Gaps = 0/286 (0%) Query 3 ELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGG 62 E A+PG LDRLRAR+GW DH +RA RFN++ G FA GLTYYTIFA+FPLLMVGF V G Sbjct 6 EPAKPGTLDRLRARYGWFDHAMRAAKRFNEQRGGFFAGGLTYYTIFALFPLLMVGFAVFG 65 Query 63 FALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMW 122 F L+ P+LL T++ +IR SVSGA+ QQLV LMNSAIDARASVG+IGLATA+W GL WM Sbjct 66 FVLASHPDLLKTIDGKIRESVSGALSQQLVGLMNSAIDARASVGLIGLATASWAGLTWMS 125 Query 123 HLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLE 182 HLR ALS+MWAHPV GY+RTKLSDL AM+GTF+V + TIALT LGH RPMA VL W Sbjct 126 HLRVALSEMWAHPVQRVGYVRTKLSDLTAMIGTFLVTMLTIALTALGHLRPMATVLSWFG 185 Query 183 IPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQ 242 IP+ ++F+ +FR IS+L+SVLV+W++FTWMI RLPR+P L T+ +AGLMAA+GFELFKQ Sbjct 186 IPELAIFNVVFRLISILISVLVAWLMFTWMIARLPRQPGRLGTSMQAGLMAAIGFELFKQ 245 Query 243 VGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 V +IYL+ VLRSPAGA FGPVLGLMVFA VTA+L+LFATAWAAT Sbjct 246 VASIYLRTVLRSPAGAAFGPVLGLMVFANVTAYLVLFATAWAATKD 291 >gi|118617113|ref|YP_905445.1| integral membrane protein [Mycobacterium ulcerans Agy99] gi|118569223|gb|ABL03974.1| conserved integral membrane protein [Mycobacterium ulcerans Agy99] Length=342 Score = 402 bits (1033), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 199/286 (70%), Positives = 235/286 (83%), Gaps = 0/286 (0%) Query 3 ELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGG 62 E A+PG LDRLRAR+GW DH +RA RFN++ G FA GLTYYTIFA+FPLLMVGF V G Sbjct 6 EPAKPGTLDRLRARYGWFDHAMRAAKRFNEQRGGFFAGGLTYYTIFALFPLLMVGFAVFG 65 Query 63 FALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMW 122 F L+ P+LL T+ +IR SVSGA+ QQLV LMNSAIDARASVG+IGLATA+W GL WM Sbjct 66 FVLASHPDLLKTINGKIRESVSGALSQQLVGLMNSAIDARASVGLIGLATASWAGLTWMS 125 Query 123 HLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLE 182 HLR ALS+MWAHPV GY+RTKLSDL AM+GTF+V + TIALT LGH RPMA VL W Sbjct 126 HLRVALSEMWAHPVQRVGYVRTKLSDLTAMIGTFLVTMLTIALTALGHLRPMATVLSWFG 185 Query 183 IPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQ 242 IP+ ++F+ +FR IS+L+SVLV+W++FTWMI RLPR+P L T+ +AGLMAA+GFELFKQ Sbjct 186 IPELAIFNVVFRLISILISVLVAWLMFTWMIARLPRQPGRLGTSMQAGLMAAIGFELFKQ 245 Query 243 VGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 V +IYL+ VLRSPAGA FGPVLGLMVFA VTA+L+LFATAWAAT Sbjct 246 VASIYLRTVLRSPAGAAFGPVLGLMVFANVTAYLVLFATAWAATKD 291 >gi|254776742|ref|ZP_05218258.1| hypothetical protein MaviaA2_19026 [Mycobacterium avium subsp. avium ATCC 25291] Length=342 Score = 401 bits (1030), Expect = 8e-110, Method: Compositional matrix adjust. Identities = 198/289 (69%), Positives = 240/289 (84%), Gaps = 1/289 (0%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 M E AE G LDRLRAR GWLDH++RA+ RF+DRNG FAAGLTYYTIFA+FPLLMVGF V Sbjct 1 MSEPAEAGFLDRLRARHGWLDHLIRAYQRFDDRNGGFFAAGLTYYTIFALFPLLMVGFAV 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 GF L+RRP+LL+++++ IR+ V+GA+G QL +LMNSAIDAR SVGVIGLATA W GLGW Sbjct 61 FGFVLARRPQLLSSIDDHIRSQVNGALGNQLQELMNSAIDARTSVGVIGLATAVWAGLGW 120 Query 121 MWHLREALSQMW-AHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLR 179 + HLR+AL++MW + G++R KLSDL AMVGTF VIVAT+ LT +GHA PMAA+L+ Sbjct 121 ISHLRQALTEMWWDTQIESPGFVRNKLSDLLAMVGTFAVIVATVGLTTVGHAAPMAALLK 180 Query 180 WLEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFEL 239 WL IPQF VFD +F S+L++ LVSW+LFTWMI RLPRE V V + RAGL+AA+GFE+ Sbjct 181 WLGIPQFVVFDWLFWIFSILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAIGFEV 240 Query 240 FKQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 FKQV +IYL+ VLRSPAGA FGPVLGLMVFA++TA+L+LF TAWAATAS Sbjct 241 FKQVASIYLRTVLRSPAGAAFGPVLGLMVFAYITAYLVLFCTAWAATAS 289 >gi|41409550|ref|NP_962386.1| hypothetical protein MAP3452c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398381|gb|AAS06002.1| hypothetical protein MAP_3452c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459581|gb|EGO38516.1| ribonuclease, putative [Mycobacterium avium subsp. paratuberculosis S397] Length=342 Score = 400 bits (1029), Expect = 9e-110, Method: Compositional matrix adjust. Identities = 198/289 (69%), Positives = 240/289 (84%), Gaps = 1/289 (0%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 M E AE G LDRLRAR GWLDH++RA+ RF+DRNG FAAGLTYYTIFA+FPLLMVGF V Sbjct 1 MSEPAEAGFLDRLRARHGWLDHLIRAYQRFDDRNGGFFAAGLTYYTIFALFPLLMVGFAV 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 GF L+RRP+LL+++++ IR+ V+GA+G QL +LMNSAIDAR SVGVIGLATA W GLGW Sbjct 61 FGFVLARRPQLLSSIDDHIRSQVNGALGNQLQELMNSAIDARTSVGVIGLATAVWAGLGW 120 Query 121 MWHLREALSQMW-AHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLR 179 + HLR+AL++MW + G++R KLSDL AMVGTF VIVAT+ LT +GHA PMAA+L+ Sbjct 121 ISHLRQALTEMWWDTQIESPGFVRNKLSDLLAMVGTFAVIVATVGLTTVGHAAPMAALLK 180 Query 180 WLEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFEL 239 WL IPQF VFD +F S+L++ LVSW+LFTWMI RLPRE V V + RAGL+AA+GFE+ Sbjct 181 WLGIPQFVVFDWLFWIFSILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAIGFEV 240 Query 240 FKQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 FKQV +IYL+ VLRSPAGA FGPVLGLMVFA++TA+L+LF TAWAATAS Sbjct 241 FKQVASIYLRTVLRSPAGAAFGPVLGLMVFAYITAYLVLFCTAWAATAS 289 >gi|254820253|ref|ZP_05225254.1| hypothetical protein MintA_10011 [Mycobacterium intracellulare ATCC 13950] Length=345 Score = 399 bits (1026), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 198/290 (69%), Positives = 242/290 (84%), Gaps = 3/290 (1%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 M E AE G LDRLR+R GWLDHV+RA+ RF++RNG FAAGLTYYTIFA+FPLLMVGF V Sbjct 1 MSEPAEEGFLDRLRSRHGWLDHVIRAYQRFDERNGGFFAAGLTYYTIFALFPLLMVGFAV 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 GF L+RRP LL+T+++ IR+ VSG +G QL +LMNSAIDAR SVGVIGL TA W GLGW Sbjct 61 FGFVLARRPHLLSTIDDHIRSQVSGTLGNQLQELMNSAIDARTSVGVIGLVTAVWAGLGW 120 Query 121 MWHLREALSQMW--AHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVL 178 + HLR+AL++MW +H +P G++R+K SDL AMVGTF VI+AT+ALT +GHA PMAA+L Sbjct 121 ISHLRQALTEMWWDSHVESP-GFVRSKFSDLLAMVGTFAVILATVALTTVGHAAPMAALL 179 Query 179 RWLEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFE 238 +WL +PQF+VFD +F S+L++ LVSW+LFTWMI RLPRE V V + RAGL+AAVGFE Sbjct 180 KWLGVPQFAVFDWLFWLFSILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAVGFE 239 Query 239 LFKQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 +FKQVG+IYL+ VLRSPAGA FGPVLGLMVFA++TA+L+LF TAW ATAS Sbjct 240 VFKQVGSIYLKTVLRSPAGAAFGPVLGLMVFAYITAYLVLFCTAWGATAS 289 >gi|240169089|ref|ZP_04747748.1| integral membrane protein [Mycobacterium kansasii ATCC 12478] Length=346 Score = 396 bits (1018), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 211/288 (74%), Positives = 239/288 (83%), Gaps = 0/288 (0%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 M E AEPG+LDRLRAR GW DH VRA+ RF++R G FAAGLTYYTIFA+FPLLMVGF V Sbjct 1 MSEPAEPGILDRLRARHGWFDHAVRAYKRFSERRGGFFAAGLTYYTIFALFPLLMVGFAV 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 GF LSR LL +RIR V GA GQQL+DL+NSAIDARASVGVIGLATAAW GLGW Sbjct 61 VGFTLSRNDRLLNMTYDRIRALVPGAFGQQLIDLVNSAIDARASVGVIGLATAAWAGLGW 120 Query 121 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW 180 M HLR ALS+MWAHPV Y+R KLSDLAAMVGTFVV +ATIALT LG+ RPMA L+W Sbjct 121 MSHLRVALSEMWAHPVELGNYVRNKLSDLAAMVGTFVVTMATIALTALGYLRPMATALKW 180 Query 181 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 L IP+FS+ D IFR ISV++SV+VSW+LFTWMI RLPR+ VT+ RAGL+AAVGFELF Sbjct 181 LGIPEFSLLDWIFRAISVVLSVVVSWLLFTWMIARLPRQSGRFVTSMRAGLIAAVGFELF 240 Query 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 KQVG+IYL+ VLRSPAGA FGPVLGLMVFA+VTA+L+LF+TAWAAT S Sbjct 241 KQVGSIYLRTVLRSPAGATFGPVLGLMVFAYVTAYLVLFSTAWAATDS 288 >gi|15827290|ref|NP_301553.1| hypothetical protein ML0687 [Mycobacterium leprae TN] gi|221229768|ref|YP_002503184.1| hypothetical protein MLBr_00687 [Mycobacterium leprae Br4923] gi|467174|gb|AAA17332.1| u0308aa [Mycobacterium leprae] gi|13092839|emb|CAC30196.1| putative membrane protein [Mycobacterium leprae] gi|219932875|emb|CAR70781.1| putative membrane protein [Mycobacterium leprae Br4923] Length=313 Score = 390 bits (1003), Expect = 8e-107, Method: Compositional matrix adjust. Identities = 198/289 (69%), Positives = 233/289 (81%), Gaps = 1/289 (0%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 M E A G++DRLR RF WLDHVVRA RF++RNGS FAAGLTYYTIFA+FP+LMV F V Sbjct 1 MTEPANTGIIDRLRGRFRWLDHVVRAHQRFDERNGSFFAAGLTYYTIFALFPMLMVSFSV 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 G L RRPELLTT+++ IR++VS +GQ+LVDLMN AIDARASVGV+GLATAAW GL W Sbjct 61 VGLVLFRRPELLTTIDDHIRSAVSSQLGQELVDLMNRAIDARASVGVVGLATAAWAGLCW 120 Query 121 MWHLREALSQMW-AHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLR 179 M H R AL++MW H + P+ LR KLSDL AMVGTFVV + T+ALTVL H PMAA+LR Sbjct 121 MSHFRAALTKMWWEHHIDPSSLLRNKLSDLLAMVGTFVVFLTTLALTVLSHQAPMAAILR 180 Query 180 WLEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFEL 239 + I F VF IF+G SVLVS LVSW+LFTWMI LPR+ V LV + R GL+AAVGFEL Sbjct 181 CIGITHFFVFGVIFQGASVLVSTLVSWLLFTWMIAWLPRKSVNLVASMRGGLIAAVGFEL 240 Query 240 FKQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 FKQVG+IYLQIVLRSPAG+VFGPVLG+MVF++ TA+L+LFA +WAATA Sbjct 241 FKQVGSIYLQIVLRSPAGSVFGPVLGVMVFSYFTAYLVLFAASWAATAE 289 >gi|296168848|ref|ZP_06850520.1| ribonuclease [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896465|gb|EFG76115.1| ribonuclease [Mycobacterium parascrofulaceum ATCC BAA-614] Length=342 Score = 379 bits (974), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 187/289 (65%), Positives = 230/289 (80%), Gaps = 1/289 (0%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 M E A G+LDRLRAR+GW DHV+RA+ RF+ RNG FAAGLTYYTIFA+FPLLMVGF Sbjct 1 MSESANAGLLDRLRARYGWFDHVLRAYQRFDGRNGGFFAAGLTYYTIFALFPLLMVGFAA 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 GF LSRRPELL T+ + IR+ V+GA+G QL+DLMNSAIDARASVGVIGLATA W GLGW Sbjct 61 FGFVLSRRPELLKTIADHIRSQVTGALGDQLLDLMNSAIDARASVGVIGLATAVWAGLGW 120 Query 121 MWHLREALSQM-WAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLR 179 + HLR+AL++M W + G++R K+SDL AM+GTF V +AT+ LT +GH P+ A+L+ Sbjct 121 ISHLRQALTEMWWEERIDSPGFVRNKVSDLLAMLGTFAVTMATVGLTTVGHDAPLRALLK 180 Query 180 WLEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFEL 239 WL IPQF V D F +S+++S VSW+LF WMI RLPRE V L + R L+AAVGFE+ Sbjct 181 WLGIPQFGVLDWFFWLLSIVISTAVSWLLFAWMIARLPREKVSLADSMRGALIAAVGFEV 240 Query 240 FKQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 FKQ G++YL+ VLRSPAGA FGPVLGLMVFA++T++L+LF TAWAATAS Sbjct 241 FKQAGSLYLRAVLRSPAGATFGPVLGLMVFAYITSYLVLFCTAWAATAS 289 >gi|333991798|ref|YP_004524412.1| hypothetical protein JDM601_3158 [Mycobacterium sp. JDM601] gi|333487766|gb|AEF37158.1| integral membrane protein [Mycobacterium sp. JDM601] Length=304 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 175/286 (62%), Positives = 219/286 (77%), Gaps = 0/286 (0%) Query 3 ELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGG 62 + ++PGV+DRLR R+GW DHV+RA R++D G+ FAAG++YYTIFA+FPL MVGF VGG Sbjct 6 DPSKPGVIDRLRERYGWFDHVMRAQERYDDCQGNFFAAGMSYYTIFALFPLAMVGFSVGG 65 Query 63 FALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMW 122 F LSRRPE+L +E RI+ S+ G G +LV LM++AI +RASVGVIGLATA WVGL WM Sbjct 66 FLLSRRPEVLDEIERRIKHSIPGTFGDELVTLMDTAISSRASVGVIGLATAGWVGLTWMA 125 Query 123 HLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLE 182 +LREALS+MW G++ KLSDL AMV F ++ TIALT L + M LRWL Sbjct 126 NLREALSEMWDKRSEKPGFVSAKLSDLVAMVWAFGAMLVTIALTALADPKLMRKTLRWLG 185 Query 183 IPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQ 242 +P F + + R SV ++V VSW+LFTWMI RLPRE VGL +AARAGL+AAVG+ELFKQ Sbjct 186 VPDFDLLGALLRVASVGMAVAVSWLLFTWMIARLPRESVGLASAARAGLIAAVGYELFKQ 245 Query 243 VGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 G++YLQ V+ PAGAVFGPVLGL+VFA++T LILFATAWAAT++ Sbjct 246 AGSVYLQSVVNGPAGAVFGPVLGLLVFAYITVRLILFATAWAATSA 291 >gi|126433842|ref|YP_001069533.1| putative ribonuclease [Mycobacterium sp. JLS] gi|126233642|gb|ABN97042.1| putative ribonuclease [Mycobacterium sp. JLS] Length=343 Score = 331 bits (848), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 177/286 (62%), Positives = 223/286 (78%), Gaps = 1/286 (0%) Query 3 ELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGG 62 E AEPG LDRLRAR+GW DHV+RA R+ D G +AAG+TY+T+FA+FPL MVGF +GG Sbjct 6 EPAEPGKLDRLRARYGWFDHVMRAQERYKDSKGDFYAAGITYFTVFALFPLTMVGFSIGG 65 Query 63 FALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMW 122 F L+ RP+LL ++E+RI T+VSG GQQLV +MN+AID+R SVG+IGLATAAW GLGWM Sbjct 66 FILASRPDLLESVEKRITTAVSGDFGQQLVQVMNAAIDSRTSVGLIGLATAAWAGLGWMA 125 Query 123 HLREALSQMWA-HPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWL 181 +LREALSQMW G+LRTKLSDL A+V TF+ + TIA+T LG M +L+WL Sbjct 126 NLREALSQMWGLQRGERPGFLRTKLSDLLALVSTFLALAVTIAITALGDRGLMRRILKWL 185 Query 182 EIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFK 241 IP+ R S+LVS+LVSW+LFTW+I RLPRE + L ++ARAGL+AAV FE+FK Sbjct 186 AIPELPGLSIGLRIASLLVSLLVSWLLFTWIIARLPRESITLRSSARAGLLAAVAFEVFK 245 Query 242 QVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATA 287 Q+G++YL+ V+ PAGA FGPVLGLMVFA++T+ LILFATAWAAT+ Sbjct 246 QLGSVYLRSVVDGPAGATFGPVLGLMVFAYITSRLILFATAWAATS 291 >gi|108798184|ref|YP_638381.1| hypothetical protein Mmcs_1213 [Mycobacterium sp. MCS] gi|119867280|ref|YP_937232.1| putative ribonuclease [Mycobacterium sp. KMS] gi|108768603|gb|ABG07325.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119693369|gb|ABL90442.1| putative ribonuclease [Mycobacterium sp. KMS] Length=339 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 164/287 (58%), Positives = 211/287 (74%), Gaps = 0/287 (0%) Query 1 MGELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV 60 M E AEPG LDRLRAR+GW DHV+RA R+ + G +AAG+TY+T+FA+FPLLM+GF + Sbjct 1 MDEPAEPGKLDRLRARYGWFDHVMRAQERYKESKGDFYAAGITYFTVFALFPLLMLGFSI 60 Query 61 GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW 120 GF L+ +P+++ + +RIR +VSG VG+QLVDLMN+AI +R S+G+ GLATAAW GLGW Sbjct 61 AGFVLASQPDVIAAIADRIRQTVSGDVGRQLVDLMNTAIGSRTSLGIFGLATAAWAGLGW 120 Query 121 MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW 180 M +LREAL+ MW + TKLSDL A++ F+ IV T+ALT LG + +L W Sbjct 121 MNNLREALTAMWQQRSETGNFFGTKLSDLIALLSAFLAIVVTVALTALGDQGVITRLLAW 180 Query 181 LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 + I R S+LV+V +SW+LFTWMI RLPRE V ++ RAGL+AAV FE+F Sbjct 181 VGIEDIPGLRWGLRAASLLVAVGISWLLFTWMISRLPRESVSFRSSVRAGLLAAVAFEIF 240 Query 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATA 287 KQV +IYL+ VL PAGA FGPVLGLMVFA++TA LILFATAWAAT+ Sbjct 241 KQVASIYLRTVLTGPAGATFGPVLGLMVFAYITARLILFATAWAATS 287 >gi|145225446|ref|YP_001136124.1| putative ribonuclease [Mycobacterium gilvum PYR-GCK] gi|315445799|ref|YP_004078678.1| ribonuclease [Mycobacterium sp. Spyr1] gi|145217932|gb|ABP47336.1| putative ribonuclease [Mycobacterium gilvum PYR-GCK] gi|315264102|gb|ADU00844.1| ribonuclease, putative [Mycobacterium sp. Spyr1] Length=346 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 166/283 (59%), Positives = 214/283 (76%), Gaps = 3/283 (1%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 +PG LDR RAR W DHV+RA R+ D G +AAG+TY+TIFA+FPLLM+GF V GF L Sbjct 13 KPGFLDRQRARRPWFDHVMRAQERYKDSKGDFYAAGITYFTIFALFPLLMLGFSVAGFVL 72 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 + +PELL +EERIR++ SG +GQQLV LM+SAI++R +VG+IGLATAAW GLGWM +LR Sbjct 73 ANQPELLQDVEERIRSTFSGDLGQQLVTLMDSAIESRGAVGLIGLATAAWAGLGWMANLR 132 Query 126 EALSQMWA--HPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEI 183 EALSQMW P G+++TKLSDL A++ TFV I+ T+AL+ LG++ + +L + Sbjct 133 EALSQMWGLFRGETP-GFVKTKLSDLVALLTTFVAIIVTLALSALGNSSLVENILTRIGF 191 Query 184 PQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQV 243 P V + R S+ VSVLVSW+LFTW+I RLPRE VG ++ RAGL+AA+ FE+FK V Sbjct 192 PDSPVLTVVLRASSITVSVLVSWLLFTWIIARLPRERVGFRSSVRAGLIAALAFEVFKLV 251 Query 244 GAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAAT 286 +IYL+ VL PAGA FGPVLGLMVFA++T+ LILF+T WAAT Sbjct 252 ASIYLRSVLTGPAGATFGPVLGLMVFAYITSRLILFSTCWAAT 294 >gi|120402568|ref|YP_952397.1| putative ribonuclease [Mycobacterium vanbaalenii PYR-1] gi|119955386|gb|ABM12391.1| putative ribonuclease [Mycobacterium vanbaalenii PYR-1] Length=347 Score = 311 bits (798), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 169/282 (60%), Positives = 212/282 (76%), Gaps = 1/282 (0%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 +PG LDR+RAR W DHV+RA R+ D G +AAG+TY+TIFA+FPLLM+GF VGGF L Sbjct 13 KPGFLDRMRARMPWFDHVMRAQERYKDAKGDFYAAGITYFTIFALFPLLMLGFSVGGFVL 72 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 + +PELL T+ ERIR++VSG +G+QL++LM+SAID+R +VGVIGLATAAW GLGWM +LR Sbjct 73 ASQPELLATVVERIRSAVSGELGRQLIELMDSAIDSRGTVGVIGLATAAWAGLGWMANLR 132 Query 126 EALSQMWA-HPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIP 184 EALSQMW + G++RTKLSDL A++ F IV T+ALT LG+ MA VL L I Sbjct 133 EALSQMWGLYREESPGFVRTKLSDLLALLSAFAAIVVTLALTALGNTSVMAGVLARLGIE 192 Query 185 QFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVG 244 + R S VSVLVSW LFTWMI RLPRE V ++ RAG++AAV FE+FK G Sbjct 193 DAPGLSLMLRLASFAVSVLVSWSLFTWMIARLPRESVSFRSSVRAGMIAAVAFEIFKFFG 252 Query 245 AIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAAT 286 ++YL+ V+ PAGA FGPVLGLMVFA++T+ LILF+ AWAAT Sbjct 253 SVYLRSVVTGPAGATFGPVLGLMVFAYITSRLILFSAAWAAT 294 >gi|118472662|ref|YP_886035.1| ribonuclease [Mycobacterium smegmatis str. MC2 155] gi|118173949|gb|ABK74845.1| ribonuclease, putative [Mycobacterium smegmatis str. MC2 155] Length=345 Score = 311 bits (798), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 166/278 (60%), Positives = 211/278 (76%), Gaps = 1/278 (0%) Query 3 ELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGG 62 E A+PG+LDRL+AR+ W DHV+RA R+ND G +AAG+TY+TIFA+FPLLMVGF VGG Sbjct 7 ESAKPGLLDRLKARWPWFDHVMRAQERYNDSKGDFYAAGITYFTIFALFPLLMVGFAVGG 66 Query 63 FALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMW 122 F L+ +PEL+ LE++IR +VSG +G QLV LM+SAID+R SVGVIGLATAAW GLGWM Sbjct 67 FVLASQPELMGQLEDKIRQAVSGDLGAQLVQLMDSAIDSRTSVGVIGLATAAWAGLGWMA 126 Query 123 HLREALSQMWA-HPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWL 181 +LREALSQMW G++RTKLSDL A++ FV I+ TI LT LG + + VL + Sbjct 127 NLREALSQMWGLFREEKPGFVRTKLSDLLALLSAFVAIILTIGLTALGSSTAIENVLNRI 186 Query 182 EIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFK 241 +P + +SVL+S+ VSW+LFTWMI RLPRE V ++ RAGL+AAVGFE+FK Sbjct 187 GMPDSVGLSILLWVLSVLMSLFVSWLLFTWMIARLPRETVTFRSSLRAGLLAAVGFEIFK 246 Query 242 QVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILF 279 Q+ +IYL+ V+ PAGA FGPVLGLMVFA++TA L+LF Sbjct 247 QLASIYLKSVITGPAGATFGPVLGLMVFAYITARLVLF 284 >gi|169630761|ref|YP_001704410.1| hypothetical protein MAB_3682c [Mycobacterium abscessus ATCC 19977] gi|169242728|emb|CAM63756.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=342 Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 145/286 (51%), Positives = 208/286 (73%), Gaps = 0/286 (0%) Query 3 ELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGG 62 E +PG+LDR RARF W DH++R R+ NG+ FAAG+TY+T+FA+FPL+MV F V G Sbjct 4 EDDKPGILDRYRARFPWFDHIMRMQERYGKVNGNFFAAGITYFTVFALFPLMMVAFAVMG 63 Query 63 FALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMW 122 F LSRRP+ + L RI ++SG VG QL++LM++AI +R S+G+ GLATAAW GLGWM Sbjct 64 FVLSRRPDTIAELRGRISGAISGEVGNQLINLMDTAIASRTSLGIAGLATAAWAGLGWMA 123 Query 123 HLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLE 182 ++R ALS MW P +++ KLSDL A+ TFV + TIA+T +G + + +L W+ Sbjct 124 NVRAALSAMWEQPNDSENFVKGKLSDLLALGSTFVALALTIAVTAVGDEKTILRILGWMG 183 Query 183 IPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQ 242 + ++ + + +++ ++ ++SW LFTWMI RLPRE + ++ RAGL+AA+GFELFKQ Sbjct 184 LHDVAIPSVLLKVVTIAIATVLSWALFTWMIARLPRERLPFSSSVRAGLIAAIGFELFKQ 243 Query 243 VGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 V +IYL +++ PAG+ FGPVLG+MVFA++TA L+L+ATAWAAT+ Sbjct 244 VASIYLSVIMHGPAGSTFGPVLGIMVFAYITARLLLYATAWAATSD 289 >gi|226365710|ref|YP_002783493.1| ribonuclease [Rhodococcus opacus B4] gi|226244200|dbj|BAH54548.1| putative ribonuclease [Rhodococcus opacus B4] Length=340 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 126/284 (45%), Positives = 189/284 (67%), Gaps = 0/284 (0%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 EP LD+ RA W DH++RA R+ ++ G +AAG+TY+++ A+ P+LMV F + GF L Sbjct 4 EPSFLDKQRAARPWFDHLMRAAQRYQNQKGDYYAAGITYFSVLALIPILMVAFAIAGFVL 63 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 + +PELL L++ I +V G++G L +++SAI +RASVGV+GL AA+ GLGWM +LR Sbjct 64 AGQPELLQELQDGITKNVPGSLGDTLNTIIDSAIASRASVGVLGLLGAAYAGLGWMANLR 123 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQ 185 +AL+ MW G++RTKL D A++G + ++ +I + L V+ L + Sbjct 124 DALTAMWESQRESKGFVRTKLGDAVALLGLGLAMIVSIGSSALSSGPVARTVVEVLNLDD 183 Query 186 FSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGA 245 + D R +S ++S++ +W +F W+I RLPREPV +A +A L+AAV FE+FKQVGA Sbjct 184 VTGVDIGLRALSTVLSLVATWAVFAWVIARLPREPVTFRSAIKAALLAAVVFEIFKQVGA 243 Query 246 IYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 IYL V PAG FGP++GL+VF ++T+ ++LF+TAWAAT A Sbjct 244 IYLTAVTAGPAGVAFGPIIGLLVFIYLTSRMLLFSTAWAATTRA 287 >gi|312140774|ref|YP_004008110.1| ribonuclease bn [Rhodococcus equi 103S] gi|311890113|emb|CBH49431.1| putative ribonuclease BN [Rhodococcus equi 103S] Length=341 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 131/283 (47%), Positives = 187/283 (67%), Gaps = 0/283 (0%) Query 5 AEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFA 64 A P LDR RA WLDH+VRA R+ + G +AAG+TY+TI AI P+LMV F V GFA Sbjct 4 AAPSFLDRQRAARPWLDHLVRAGGRYQQQKGDYYAAGITYFTILAIVPILMVAFAVAGFA 63 Query 65 LSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHL 124 L+ PE + +++++ ++ G +G+ + L++SAI AR SVGV GL AA+ G+GW+ +L Sbjct 64 LAGNPEWVDEIQDQVSNNMPGGLGETVNGLIDSAISARTSVGVFGLLGAAYAGIGWITNL 123 Query 125 REALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIP 184 R+AL+ MW H ++ TKL D A++G ++ T L+ L + V+ WL + Sbjct 124 RDALTAMWEHTHEAGNFVITKLKDFGALLGLGGAMLVTFGLSALSNGPVARQVVEWLGVE 183 Query 185 QFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVG 244 + + R S+ +SVL +W L +W+I R+PRE V L +A RA AA+ FE+F+QVG Sbjct 184 HVTGVGVLLRITSLAISVLATWALLSWVIARMPREAVTLRSAGRAAFAAAIVFEIFRQVG 243 Query 245 AIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATA 287 AIYL+ V + PAGA FGP++GL+VFA ++A LILFATAWAATA Sbjct 244 AIYLEAVSQGPAGAAFGPIIGLLVFANLSARLILFATAWAATA 286 >gi|325675586|ref|ZP_08155270.1| tRNA-processing ribonuclease BN [Rhodococcus equi ATCC 33707] gi|325553557|gb|EGD23235.1| tRNA-processing ribonuclease BN [Rhodococcus equi ATCC 33707] Length=341 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 131/283 (47%), Positives = 187/283 (67%), Gaps = 0/283 (0%) Query 5 AEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFA 64 A P LDR RA WLDH+VRA R+ + G +AAG+TY+TI AI P+LMV F V GFA Sbjct 4 AAPSFLDRQRAARPWLDHLVRAGGRYQQQKGDYYAAGITYFTILAIVPILMVAFAVAGFA 63 Query 65 LSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHL 124 L+ PE + +++++ ++ G +G+ + L++SAI AR SVGV GL AA+ G+GW+ +L Sbjct 64 LAGNPEWVDEIQDQVSNNMPGGLGETVNGLIDSAISARTSVGVFGLLGAAYAGIGWITNL 123 Query 125 REALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIP 184 R+AL+ MW H ++ TKL D A++G ++ T L+ L + V+ WL + Sbjct 124 RDALTAMWEHTHEAGNFVITKLKDFGALLGLGGAMLVTFGLSALSNGPVARQVVEWLGVE 183 Query 185 QFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVG 244 + + R S+ +SVL +W L +W+I R+PRE V L +A RA AA+ FE+F+QVG Sbjct 184 HVTGVGVLLRITSLAISVLATWALLSWVIARMPREAVTLRSAGRAAFAAAIVFEVFRQVG 243 Query 245 AIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATA 287 AIYL+ V + PAGA FGP++GL+VFA ++A LILFATAWAATA Sbjct 244 AIYLEAVSQGPAGAAFGPIIGLLVFANLSARLILFATAWAATA 286 >gi|229489464|ref|ZP_04383327.1| putative ribonuclease [Rhodococcus erythropolis SK121] gi|229323561|gb|EEN89319.1| putative ribonuclease [Rhodococcus erythropolis SK121] Length=344 Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 129/280 (47%), Positives = 191/280 (69%), Gaps = 0/280 (0%) Query 7 PGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALS 66 P L++ RA WLDH+VRA RF ++ G +AAG+TY+++ A+ P++MV F V GF L+ Sbjct 9 PSFLEKQRAARPWLDHLVRAAGRFQEQKGDYYAAGITYFSVLALIPIMMVAFAVAGFVLA 68 Query 67 RRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLRE 126 PE L +++E+I S+ G++G + L++SAID+RASVG+ GL AA+ GLGWM ++R+ Sbjct 69 GHPEYLESIQEQITKSIPGSLGDTINTLIDSAIDSRASVGIFGLLGAAYAGLGWMANVRD 128 Query 127 ALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQF 186 AL+ MW P G++RTKL D A+VG + +V ++ ++ L +++WL + Sbjct 129 ALTAMWESKREPKGFVRTKLGDAGALVGLALAMVVSLGMSALSSGPVATQIVKWLNLENI 188 Query 187 SVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAI 246 + R +S+L+S+L +W +F W+I RLPREPV L +AA+A L+AAV FE+FKQVGAI Sbjct 189 TGVGVGLRVVSLLLSLLATWAVFLWVIARLPREPVTLRSAAQAALIAAVVFEIFKQVGAI 248 Query 247 YLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAAT 286 YL V PAG FGP++GL+VF F + ++LF TAWAAT Sbjct 249 YLAAVTNGPAGVAFGPIIGLLVFVFTASRMLLFCTAWAAT 288 >gi|226305498|ref|YP_002765458.1| hypothetical protein RER_20110 [Rhodococcus erythropolis PR4] gi|226184615|dbj|BAH32719.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=349 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 128/280 (46%), Positives = 191/280 (69%), Gaps = 0/280 (0%) Query 7 PGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALS 66 P L++ RA WLDH+VRA RF ++ G +AAG+TY+++ A+ P++MV F V GF L+ Sbjct 14 PSFLEKQRAARPWLDHLVRAAGRFQEQKGDYYAAGITYFSVLALIPIMMVAFAVAGFVLA 73 Query 67 RRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLRE 126 PE L +++E+I S+ G++G + L++SAID+RASVG+ GL AA+ GLGWM ++R+ Sbjct 74 GHPEYLESIQEQITKSIPGSLGDTINTLIDSAIDSRASVGIFGLLGAAYAGLGWMANVRD 133 Query 127 ALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQF 186 AL+ MW P G++RTKL D A++G + +V ++ ++ L +++WL + Sbjct 134 ALTAMWESKREPKGFVRTKLGDAGALIGLALAMVVSLGMSALSSGPVATQIVKWLNLENI 193 Query 187 SVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAI 246 + R +S+L+S+L +W +F W+I RLPREPV L +AA+A L+AAV FE+FKQVGAI Sbjct 194 TGVGVGLRVVSLLLSLLATWAVFLWVIARLPREPVTLRSAAQAALIAAVVFEIFKQVGAI 253 Query 247 YLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAAT 286 YL V PAG FGP++GL+VF F + ++LF TAWAAT Sbjct 254 YLAAVTSGPAGVAFGPIIGLLVFVFTASRMLLFCTAWAAT 293 >gi|333921636|ref|YP_004495217.1| putative ribonuclease [Amycolicicoccus subflavus DQS3-9A1] gi|333483857|gb|AEF42417.1| Putative ribonuclease [Amycolicicoccus subflavus DQS3-9A1] Length=341 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 121/283 (43%), Positives = 184/283 (66%), Gaps = 0/283 (0%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 +P LD+ RA++ W DH++RA TRF ++G +AAG+TY+++FA+ PLL+VGF V GF L Sbjct 4 KPSFLDKQRAKYPWFDHLMRAVTRFTGQHGDYYAAGITYFSVFALAPLLLVGFAVAGFVL 63 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 +R ELL+ ++ I + G GQQ+ DL+ SA++ R + GL A + GLGW+ +LR Sbjct 64 ARNQELLSEIQVAIEEELPGGFGQQIGDLLESAVEQRGTALSFGLILALYAGLGWISNLR 123 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQ 185 +AL+ W +++TK+ DL M G F+ I ++ LT L + M +L L + Sbjct 124 KALTMQWGAQPPKLNFIKTKIYDLGVMAGLFLAIGVSLGLTALSGPQLMGVILDPLGLDD 183 Query 186 FSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGA 245 R +S +++V+ +W++FTW+I +LPR PV +A RA L A+ FE+FKQVG Sbjct 184 APGVGVAARLVSFVLAVVATWLVFTWVIAKLPRYPVATRSAVRAALGMAIFFEIFKQVGQ 243 Query 246 IYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 YL V+ +PAGAVFGP++G++VF F+TA +LF TAWAAT++ Sbjct 244 AYLTSVMDNPAGAVFGPIIGILVFIFITARALLFFTAWAATSA 286 >gi|111023205|ref|YP_706177.1| tRNA-processing ribonuclease BN [Rhodococcus jostii RHA1] gi|110822735|gb|ABG98019.1| possible tRNA-processing ribonuclease BN [Rhodococcus jostii RHA1] Length=340 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 134/287 (47%), Positives = 192/287 (67%), Gaps = 6/287 (2%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 EP LDR RA W DH++RA R+ + G +AAG+TY+++ A+ P+LMV F + GF L Sbjct 4 EPSFLDRQRAARPWFDHLMRAAQRYQQQKGDYYAAGITYFSVLALIPILMVAFAIAGFVL 63 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 + +PELL L++ I +V G++G L +++SAI +RASVGV+GL AA+ GLGWM +LR Sbjct 64 AGQPELLQELQDSITKNVPGSLGDTLNTVIDSAIASRASVGVLGLLGAAYAGLGWMANLR 123 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGT---FVVIVATIALTVLGHARPMAAVLRWLE 182 +AL+ MW G++RTKL D AA++G VV + + AL+ AR + VL + Sbjct 124 DALTAMWESQRESKGFVRTKLGDAAALLGLGLAMVVSLGSSALSSGPVARTVVEVLNLDD 183 Query 183 IPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQ 242 +P D R +S +VS++ +W +F W+I RLPREPV +A +A L+AAV FE+FKQ Sbjct 184 VPGV---DAGLRALSTVVSLVATWAVFAWVIARLPREPVTFRSALKAALLAAVVFEIFKQ 240 Query 243 VGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 VGAIYL V PAG FGP++GL+VF ++T ++LF+TAWAAT+ A Sbjct 241 VGAIYLSAVTAGPAGVAFGPIIGLLVFIYLTCRMLLFSTAWAATSRA 287 >gi|262201713|ref|YP_003272921.1| ribonuclease BN [Gordonia bronchialis DSM 43247] gi|262085060|gb|ACY21028.1| ribonuclease BN [Gordonia bronchialis DSM 43247] Length=377 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 121/291 (42%), Positives = 189/291 (65%), Gaps = 8/291 (2%) Query 3 ELAEPGVLDR-------LRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLM 55 E ++P ++D+ R R+ W++H+V R+NDR G+++AAG+++ I AI P++M Sbjct 31 EESKPSLVDKGKAAFAQARERWPWINHLVATVERYNDRRGNVYAAGISFNGILAIVPIIM 90 Query 56 VGFGVGGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAW 115 VGF + F L+ RPELL L+ I ++ G G QL D+++SAID+RA+VG+IGL AA+ Sbjct 91 VGFAIAAFVLASRPELLDELKNAIVDAMPGQAGDQLGDVIDSAIDSRATVGLIGLFGAAF 150 Query 116 VGLGWMWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMA 175 G+GW+ +R A ++M+ V + +K+ DL V V AT+ALT LG++ Sbjct 151 TGIGWISGVRVAFTEMYGGRVD-RNPVMSKVWDLVTFVLLGVAFAATMALTALGNSGLTT 209 Query 176 AVLRWLEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAV 235 +L W+ + S + R +S+L+SV SW+LFT+++ RLP P+ V A +AGL A+ Sbjct 210 KLLSWVSLDDASWAPVVVRVVSILISVFASWLLFTFVLARLPLVPLPFVNAMKAGLATAI 269 Query 236 GFELFKQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAAT 286 FE+ K +G +YL+ VL SPAG FGP+LGLMVFA++ + ++L+A+AW AT Sbjct 270 AFEIVKSLGGLYLKSVLSSPAGIAFGPILGLMVFAYLASRIVLYASAWCAT 320 >gi|296138679|ref|YP_003645922.1| ribonuclease [Tsukamurella paurometabola DSM 20162] gi|296026813|gb|ADG77583.1| ribonuclease [Tsukamurella paurometabola DSM 20162] Length=332 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 118/279 (43%), Positives = 179/279 (65%), Gaps = 1/279 (0%) Query 9 VLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALSRR 68 +LD+ R R+ W DH++ A R+ D+ G F AG+TY+++FA+FPL MV F VGG+ L Sbjct 1 MLDKYRQRWPWFDHLMAAAERYQDKKGDYFGAGITYFSVFALFPLAMVAFSVGGYVLIND 60 Query 69 PELLTTLEERIRTSVSG-AVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLREA 127 ELL L+ I +++S ++ + + DL++ AI +R +VG++GLA W GLGWM ++R A Sbjct 61 AELLAELKMEINSAISEESLRKSVNDLIDQAIGSRGTVGIVGLAGGLWAGLGWMSNVRAA 120 Query 128 LSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFS 187 L+ MW V +++TKL DL A+VG FVVIVA IAL +G + +L + + Sbjct 121 LTAMWDSDVPKQNFVKTKLQDLGALVGLFVVIVACIALMAVGSSPLTGKILASMGLGDVP 180 Query 188 VFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIY 247 + +V+V++L W L+T++I +LPR A RAGL+ +V F +F QV A+ Sbjct 181 GLQGLVTTATVIVTLLAGWALWTFVIAKLPRVQFPWRNALRAGLLTSVAFYIFMQVAALL 240 Query 248 LQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAAT 286 + ++ PAGA FGP+LG+M+F + TA ++LFATAWAAT Sbjct 241 IGNTMKGPAGATFGPILGIMLFIYFTARIVLFATAWAAT 279 >gi|343926634|ref|ZP_08766132.1| putative ribonuclease [Gordonia alkanivorans NBRC 16433] gi|343763386|dbj|GAA13058.1| putative ribonuclease [Gordonia alkanivorans NBRC 16433] Length=354 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 117/279 (42%), Positives = 179/279 (65%), Gaps = 2/279 (0%) Query 11 DRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALSRRPE 70 DR R R+ WLDH++R R+NDR G+L+AA +++ I A+ P++MV F V GF L+R+PE Sbjct 21 DR-RERWTWLDHLLRTVDRYNDRRGNLYAASISFNGILALVPIIMVAFAVAGFVLARQPE 79 Query 71 LLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLREALSQ 130 LL +++ + + G +G Q+ D++ SAID+R +VGV+GL AA+ G+GW+ +R +++ Sbjct 80 LLQNIQDAVVEKMPGQLGDQVSDIITSAIDSRTTVGVVGLLGAAFTGIGWISGVRTGMTE 139 Query 131 MWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFSVFD 190 MW V + +K+ DL G V T+ALT LG++ VL W+ + S Sbjct 140 MWGGRVQRNAVM-SKVWDLVTFAGLGVAFAVTMALTALGNSGLTRTVLGWVGLDDASWAP 198 Query 191 EIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIYLQI 250 + R +S+ VS+L +W LFT+++ RLP + +AGL+ AV FE+ K VG +YLQ Sbjct 199 VLVRLVSIAVSILATWALFTFIMARLPLVQLPFRNTLKAGLITAVAFEIVKTVGGLYLQS 258 Query 251 VLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA 289 VL SPAG FGP+LG+MVFA++ + ++L+A AW AT A Sbjct 259 VLSSPAGVAFGPILGVMVFAYLASRIVLYAAAWCATDPA 297 >gi|331699049|ref|YP_004335288.1| ribonuclease [Pseudonocardia dioxanivorans CB1190] gi|326953738|gb|AEA27435.1| ribonuclease [Pseudonocardia dioxanivorans CB1190] Length=355 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 123/284 (44%), Positives = 183/284 (65%), Gaps = 3/284 (1%) Query 5 AEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFA 64 A PG L++LR+R+ WLDHVVRA R+ DR+G +AA +TY+++ A+ PLLM+ F + GFA Sbjct 19 AGPGKLEQLRSRYAWLDHVVRAGARYTDRHGDHYAAAITYFSVLALVPLLMIAFAIAGFA 78 Query 65 LSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHL 124 L +PELL L I T+V G +G L D++ +ID +VGV+GL A + G+GWM +L Sbjct 79 LRAQPELLEQLRVAITTAVPGGLGDTLNDIIQKSIDQAGAVGVLGLIGALYSGIGWMSNL 138 Query 125 REALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIP 184 REALS+ WA P ++ + DL A++G + +V ++A+T +G + Sbjct 139 REALSEQWAQPPETPNAVKKLIFDLLALLGLGLALVVSLAVTAVGTGVGRLLLDLVGLGD 198 Query 185 Q-FSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQV 243 Q +++F + VL+ ++ +W++F W+I RLPR PV +A +A ++ AVGFE+ KQV Sbjct 199 QGWALFLLGV--VGVLLGLVANWLVFVWVIARLPRAPVATRSALKAAVLGAVGFEILKQV 256 Query 244 GAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATA 287 IYL+ V SPAGA FG ++GL++F F + ILF TAWAATA Sbjct 257 MTIYLRAVTNSPAGAAFGSIIGLLIFVFFVSRFILFVTAWAATA 300 >gi|54022904|ref|YP_117146.1| hypothetical protein nfa9370 [Nocardia farcinica IFM 10152] gi|54014412|dbj|BAD55782.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=339 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 121/274 (45%), Positives = 183/274 (67%), Gaps = 1/274 (0%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 + G+ R++AR WLDH++RA ++ + G FAAG+TY+T+ ++FPLLMV F + GF L Sbjct 8 KAGIERRVQAR-PWLDHLIRAGGQYQRQRGDYFAAGITYFTVLSLFPLLMVAFAIAGFVL 66 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 + +L T L+ +I ++ G G Q+ DL++ A+++R +VGV+GL T W GLGWM +LR Sbjct 67 AGNQDLFTELQNKIVENIPGEFGTQVNDLVDQAVESRGTVGVLGLITGLWTGLGWMANLR 126 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQ 185 AL++ W + TKLSDL A+VG V +V ++ L+ +G + VL L + Sbjct 127 AALTEQWEGKHEDGNWFLTKLSDLGALVGLGVALVLSLGLSAVGSSDLGERVLDGLGLGG 186 Query 186 FSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGA 245 + +S+L++++ SW +F W+I RLPREPV L +AA+A L+AA+ FE+FK V + Sbjct 187 VPGARLLLTAVSILLALVASWAVFAWIIARLPREPVTLASAAKAALLAALIFEVFKFVAS 246 Query 246 IYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILF 279 IYL+ VLRSPAGA FG ++GLMVF++VT +ILF Sbjct 247 IYLRTVLRSPAGATFGSIIGLMVFSYVTYRIILF 280 >gi|256380456|ref|YP_003104116.1| ribonuclease [Actinosynnema mirum DSM 43827] gi|255924759|gb|ACU40270.1| ribonuclease [Actinosynnema mirum DSM 43827] Length=339 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 110/279 (40%), Positives = 180/279 (65%), Gaps = 1/279 (0%) Query 10 LDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALSRRP 69 +DRLRAR+ WLDHV+RA R+ +R G+ +AA +TY+++ ++ PLLM+GF V G L+ +P Sbjct 13 IDRLRARYPWLDHVIRAGVRYTERYGTHYAAAVTYFSVLSLVPLLMIGFAVAGIVLTSQP 72 Query 70 ELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLREALS 129 LL L I +V G++G L +++ AID++ +VGV GL AA+ G+GW+ +LR+AL+ Sbjct 73 ALLDDLRGAITEAVPGSLGDTLNEVVGQAIDSKGTVGVFGLLGAAYSGIGWITNLRDALT 132 Query 130 QMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFSVF 189 W +P A ++T + DL A++G + +V ++ +T +G VLR + + Sbjct 133 AQWGYPKADLPLVKTAVRDLFALIGLGIALVVSVGITAVGSGFAH-LVLRGIGLDGVWWA 191 Query 190 DEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIYLQ 249 + + R ++++ + +W++F W++ +LPR+PV +A R + +VGFEL KQ G+IYL Sbjct 192 EALLRAGTIVLGLAANWLVFLWVLAKLPRKPVSWRSAMRGAAVTSVGFELLKQGGSIYLG 251 Query 250 IVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 I+ SP G FGP++G++VFA + A +LF AW ATA Sbjct 252 IIGTSPTGLAFGPLIGVLVFANLLAQFMLFMAAWTATAK 290 >gi|317509129|ref|ZP_07966755.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974] gi|316252565|gb|EFV12009.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974] Length=328 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 110/264 (42%), Positives = 167/264 (64%), Gaps = 1/264 (0%) Query 24 VRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALSRRPELLTTLEERIRTSV 83 +RA R+ DR FAAG+TYY++ ++FP++MVGF + G L + PELL ++ERI + Sbjct 1 MRAVERYQDRKADFFAAGVTYYSVLSLFPVIMVGFAILGQVLIQNPELLEHIKERITSMA 60 Query 84 SGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLREALSQMWAH-PVAPAGYL 142 G + +QL L++SAI +R +VG +GLA W GLGWM LRE+L+Q+W P + A + Sbjct 61 QGGLAKQLNQLIDSAIASRTTVGTVGLALGLWSGLGWMAALRESLTQLWQQDPDSEANWF 120 Query 143 RTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFSVFDEIFRGISVLVSV 202 +TK SDL AM + +V L L + + L + + +S +S +++ Sbjct 121 KTKFSDLLAMASFGLALVVVFGLITLSKSSWLVKALVKVGLGDWSGGQGFLTIVSTVLAT 180 Query 203 LVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIYLQIVLRSPAGAVFGP 262 + +W+LFT++I RLPR+ V L A++AGL+ A+ F++F ++ + L+ V PAG FGP Sbjct 181 IAAWLLFTFVIARLPRKSVALADASQAGLLGAILFQIFLELAWLLLKGVTNGPAGKTFGP 240 Query 263 VLGLMVFAFVTAWLILFATAWAAT 286 +LGLMVF F T ++LFATAWAAT Sbjct 241 ILGLMVFFFFTVRIVLFATAWAAT 264 >gi|300857884|ref|YP_003782867.1| hypothetical protein cpfrc_00467 [Corynebacterium pseudotuberculosis FRC41] gi|300685338|gb|ADK28260.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] Length=361 Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 103/286 (37%), Positives = 175/286 (62%), Gaps = 6/286 (2%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 EPG +D+ RA++ W DH++R R+ + G+ ++AG+TY+++ ++FPLLM+ + L Sbjct 27 EPGFVDKYRAKWSWFDHIMRMNERYGEEGGNQYSAGITYFSVLSMFPLLMLIMAIAASML 86 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 ++RP+LL L+E+I SV G++ + L ++++AI R ++ IG TA W GLGWM +LR Sbjct 87 AQRPDLLAQLQEKIVASVDGSIAETLTKILDTAIAQRGAMFGIGGLTALWSGLGWMSNLR 146 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVG---TFVVIVATIALTVLGHARPMAAVLRWLE 182 S+MW +PV + + KL DL +VG F+V A+ G + V+ + Sbjct 147 YGASKMWCYPVTGENFFKAKLQDLLGLVGLIFAFMVAFGVTAIGSSGLTERLLVVVSLDK 206 Query 183 IPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQ 242 +P +F F +S+L+ ++ ++ +F WM+ LPR V + +A RA ++ AV FE+FKQ Sbjct 207 VP--GIFLLTF-AVSILLGLIANFCVFLWMLKYLPRGEVPMKSAVRASIIGAVLFEVFKQ 263 Query 243 VGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 + A + L +PAGA FGP++G+MV + ++++ +AWAAT Sbjct 264 LAAQFFSNALNNPAGATFGPIIGVMVLFYFVWRILMYCSAWAATTE 309 >gi|302205611|gb|ADL09953.1| Ribonuclease BN-like family [Corynebacterium pseudotuberculosis C231] gi|302330164|gb|ADL20358.1| Ribonuclease BN-like family [Corynebacterium pseudotuberculosis 1002] gi|308275847|gb|ADO25746.1| ribonuclease [Corynebacterium pseudotuberculosis I19] gi|341824276|gb|AEK91797.1| Ribonuclease BN-like family [Corynebacterium pseudotuberculosis PAT10] Length=361 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 103/286 (37%), Positives = 174/286 (61%), Gaps = 6/286 (2%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 EPG +D+ RA++ W DH++R R+ G+ ++AG+TY+++ ++FPLLM+ + L Sbjct 27 EPGFVDKYRAKWSWFDHIMRMNERYGKEGGNQYSAGITYFSVLSMFPLLMLIMAIAASML 86 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 ++RP+LL L+E+I SV G++ + L ++++AI R ++ IG TA W GLGWM +LR Sbjct 87 AQRPDLLAQLQEKIVASVDGSIAETLTKILDTAIAQRGAMFGIGGLTALWSGLGWMSNLR 146 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVG---TFVVIVATIALTVLGHARPMAAVLRWLE 182 S+MW +PV + + KL DL +VG F+V A+ G + V+ + Sbjct 147 YGASKMWCYPVTGENFFKAKLQDLLGLVGLIFAFMVAFGVTAIGSSGLTERLLVVVSLDK 206 Query 183 IPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQ 242 +P +F F +S+L+ ++ ++ +F WM+ LPR V + +A RA ++ AV FE+FKQ Sbjct 207 VP--GIFLLTF-AVSILLGLIANFCVFLWMLKYLPRGEVPMKSAVRASIIGAVLFEVFKQ 263 Query 243 VGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 + A + L +PAGA FGP++G+MV + ++++ +AWAAT Sbjct 264 LAAQFFSNALNNPAGATFGPIIGVMVLFYFVWRILMYCSAWAATTE 309 >gi|134103022|ref|YP_001108683.1| tRNA-processing ribonuclease BN [Saccharopolyspora erythraea NRRL 2338] gi|291005222|ref|ZP_06563195.1| tRNA-processing ribonuclease BN [Saccharopolyspora erythraea NRRL 2338] gi|133915645|emb|CAM05758.1| possible tRNA-processing ribonuclease BN [Saccharopolyspora erythraea NRRL 2338] Length=338 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 117/287 (41%), Positives = 172/287 (60%), Gaps = 12/287 (4%) Query 7 PGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALS 66 PG+L RLR R WLD ++RA R+ + G +AA +TY+++ A+ PLLM+ F + GF L Sbjct 8 PGLLARLRQRHEWLDRLIRAANRYQSQYGDYYAAAITYFSVLALVPLLMIAFAIAGFVLG 67 Query 67 RRPELLTTLEERIRTSVSG-AVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 P+LL L I T+V A+ Q L ++++ AI +VG+IGL A + GL WM +LR Sbjct 68 GNPDLLAQLRNSITTAVPNPAMSQMLNNVVDQAIGQAGAVGIIGLVAALYSGLSWMTNLR 127 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQ 185 EAL+ +W LR +SDL +++G + + + ++ +G V R L + Sbjct 128 EALTALWTQEPEQQPVLRKYVSDLLSLIGLGLAMGISFGISAVG-----GGVGRML-LEL 181 Query 186 FSVFDEIFR--GISVLVSVL---VSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF 240 + D F G+ VL ++L SW++F W++ RLPR+PV L +A L AVGFE+ Sbjct 182 AGIDDTPFARAGLQVLATLLSLAASWLVFLWILARLPRKPVSLRSAVWGALFGAVGFEIL 241 Query 241 KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATA 287 KQVG YL V SPA A FGP+LGL+VF+++T+ ILF TAW A+A Sbjct 242 KQVGVFYLNSVTGSPAAAAFGPILGLLVFSYLTSRFILFVTAWTASA 288 >gi|213964986|ref|ZP_03393185.1| putative ribonuclease [Corynebacterium amycolatum SK46] gi|213952522|gb|EEB63905.1| putative ribonuclease [Corynebacterium amycolatum SK46] Length=341 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 102/286 (36%), Positives = 173/286 (61%), Gaps = 6/286 (2%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 EP +DRLR ++ W DHV+R R++++ G+ FAA +TY+++ +IFPL+M F + L Sbjct 24 EPSAIDRLREKWAWFDHVMRMQERYSEQGGNFFAAAVTYFSVLSIFPLIMTAFAILALVL 83 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 +LL ++ I S+ G++G + ++ AID V +G W GLGWM +L Sbjct 84 RGNDQLLEQIQSAITDSIDGSMGDTINAIIEGAIDQAGGVFTVGFIATLWSGLGWMGNLS 143 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWL---E 182 A++Q+W P+ + ++ K+ DL ++G V+IV T A+T +G + ++L + + Sbjct 144 NAVTQLWKRPLGASNFVMGKVRDLLRLLGMLVMIVLTFAVTAVGSSGLTQSLLDKVGLAD 203 Query 183 IPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQ 242 IP ++ + I++ V +L +W+LF WM+ LPR L +AA+ ++ A+GFE+ KQ Sbjct 204 IPGITIIAGL---IAIAVGLLANWLLFFWMLAFLPRGGAPLRSAAKGAIIGAIGFEVVKQ 260 Query 243 VGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 +G+++ L +PAGAVFGPV+GLMV ++ + ++ATAW AT Sbjct 261 LGSVFFSNALSNPAGAVFGPVIGLMVVFYLIWRITMYATAWTATTE 306 >gi|334564379|ref|ZP_08517370.1| hypothetical protein CbovD2_07373 [Corynebacterium bovis DSM 20582] Length=362 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 106/281 (38%), Positives = 166/281 (60%), Gaps = 0/281 (0%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 +PG + R R R+ W DH++R R+ D+ G+ +AAG+TY+++ +FPLLMV F V L Sbjct 24 DPGAVARYRERWPWFDHLMRMNERYGDQGGNQYAAGITYFSVMTLFPLLMVAFAVAAMVL 83 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 + +LL + + +R S G +G+ L D++N AID R V IGL A W GLGWM +LR Sbjct 84 AGNQQLLDKILDTVRDSGDGQLGEVLSDIINQAIDQRTGVFSIGLLLALWTGLGWMGNLR 143 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQ 185 +S +W P PA +L KL D +VG V ++ A+T G + +L + + Sbjct 144 MGVSAVWKVPGKPANFLTGKLRDFIGLVGLLVALIIAFAITAFGGSGFTGDLLDHMGLGD 203 Query 186 FSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGA 245 + I+++V++L +WV+F WM+ LPR V +AA+A ++ AV FE+FKQ Sbjct 204 VPGIRFLTWLIALVVALLANWVVFFWMLLYLPRTHVPRRSAAKAAVIGAVAFEVFKQFAT 263 Query 246 IYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAAT 286 ++ +PAGA FGP++G+MV + ++L+ +AWAAT Sbjct 264 VFFSNATSNPAGATFGPIIGVMVLLYFVWRIVLYCSAWAAT 304 >gi|336326328|ref|YP_004606294.1| hypothetical protein CRES_1778 [Corynebacterium resistens DSM 45100] gi|336102310|gb|AEI10130.1| putative membrane protein [Corynebacterium resistens DSM 45100] Length=330 Score = 198 bits (503), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 96/283 (34%), Positives = 166/283 (59%), Gaps = 0/283 (0%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 EPG +D+ R ++ W DHV+R R++++ G+ FAAG+TY+++ ++FP+LM+ F + L Sbjct 25 EPGAIDKYREKWPWFDHVMRMQERYSEQGGNQFAAGITYFSVLSLFPILMLVFSIVAMVL 84 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 + ELL + +++ S G + + L ++++ A+D R SV IGL A W GLGWM HLR Sbjct 85 AGDQELLNRVVDKVSQSGGGKMSETLSEVIHQAVDQRGSVFSIGLLLALWTGLGWMAHLR 144 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQ 185 S MW + +L K+ D ++G V + A+T +G++ +L L + Q Sbjct 145 MGASAMWKVSGSAKSFLSGKIKDFIGLIGLLVAFIIAFAITAIGNSGLTMRILETLHLEQ 204 Query 186 FSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGA 245 + ++++V+++ ++++F W+I LPR + RA ++ AV FE+FKQ Sbjct 205 VPGIRILTFAVALVVALIANYLVFVWLIAYLPRTKTDRPSVFRAAIIGAVAFEVFKQFAT 264 Query 246 IYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 I+ L +PAGA FGP++G+MV + ++L+ +AWAAT Sbjct 265 IFFSNALSNPAGAAFGPIIGIMVLMYFVWRIVLYCSAWAATTE 307 >gi|337290133|ref|YP_004629154.1| hypothetical protein CULC22_00517 [Corynebacterium ulcerans BR-AD22] gi|334696254|gb|AEG81051.1| putative membrane protein [Corynebacterium ulcerans 809] gi|334698439|gb|AEG83235.1| putative membrane protein [Corynebacterium ulcerans BR-AD22] Length=361 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 97/283 (35%), Positives = 172/283 (61%), Gaps = 0/283 (0%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 EPG +D+ R ++ W DH++R R++ G+ ++AG+TY+++ ++FPLLM+ + L Sbjct 27 EPGFVDKYRNKWPWFDHIMRMNERYSKEGGNQYSAGITYFSVLSMFPLLMLIMAIAASML 86 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 ++RP+LL L+E+I SV G++ + L ++++AID R ++ IG TA W GLGWM +LR Sbjct 87 AQRPDLLAQLQEKIVASVDGSIAETLTKILDTAIDQRGAMFGIGGLTALWSGLGWMANLR 146 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQ 185 S+MW +PV + + KL DL +VG + + +T +G + +L + + Sbjct 147 YGASKMWCYPVTGENFFKAKLQDLLGLVGLLLAFIVAFGVTAIGSSGLTERLLVAVSLDD 206 Query 186 FSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGA 245 + +++L+ ++ ++ +F WM+ LPR V + +A RA ++ AV FE+FKQ+ A Sbjct 207 VPGIFLLTFAVAILLGLVANFFVFLWMLKYLPRGEVPMKSAVRAAIIGAVLFEIFKQLAA 266 Query 246 IYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 + L +PAGA FGP++G+MV + ++++ +AWAAT Sbjct 267 QFFSNALNNPAGATFGPIIGVMVLFYFVWRILMYCSAWAATTE 309 >gi|227486998|ref|ZP_03917314.1| ribonuclease [Corynebacterium glucuronolyticum ATCC 51867] gi|227093072|gb|EEI28384.1| ribonuclease [Corynebacterium glucuronolyticum ATCC 51867] Length=361 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 101/283 (36%), Positives = 176/283 (63%), Gaps = 0/283 (0%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 E V+D+LR ++GW DH++R R+ + G+ +AAG+TY+++ ++FPLLM+ FG+ GF L Sbjct 24 EQSVVDKLRDKWGWFDHIMRMNERYGEMGGNQYAAGITYFSVLSLFPLLMLAFGLAGFFL 83 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 RPELL +EE+I +S+SG +G+ + ++++AID +V IG TA W GLGWM +LR Sbjct 84 KNRPELLAQIEEQITSSLSGELGETVNQVVSTAIDQAGAVFSIGALTALWSGLGWMNNLR 143 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQ 185 +SQ W ++ KL DL ++G + + +T +G + +L L++ Q Sbjct 144 FGVSQQWKIDPTGGNFVMNKLRDLLGLLGLMLTLSLAFGVTAVGSSGLTHRILELLQLEQ 203 Query 186 FSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGA 245 I +++++ + ++++F W+I +PR + +AA+ L+ A+ FE+FKQ+G+ Sbjct 204 VPGIGAITTIVAIILGIGANFLVFFWLIKYMPRGKTPVKSAAQGALIGALIFEVFKQLGS 263 Query 246 IYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 ++ L +PAGA FGP++G+MV + ++L+ +AWAAT Sbjct 264 MFFSNALSNPAGATFGPIIGIMVLLYFIWRILLYCSAWAATTE 306 >gi|324999564|ref|ZP_08120676.1| tRNA-processing ribonuclease BN [Pseudonocardia sp. P1] Length=354 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 109/286 (39%), Positives = 174/286 (61%), Gaps = 1/286 (0%) Query 3 ELAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGG 62 E P L+R R + WLDH+VRA R+ + +G +AA +TY+++ A+ PLLMV F G Sbjct 17 EEEGPTFLERQREQRPWLDHLVRAGARYTENHGDHYAAAITYFSVLALVPLLMVAFAAAG 76 Query 63 FALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMW 122 F L ELL +L++ I ++ G +GQ L ++++AI ++G+IGL A + G+GWM Sbjct 77 FVLRGNEELLQSLQDGIASAAPGEIGQLLSGVVDTAIKQAGAIGLIGLVGALYSGIGWMS 136 Query 123 HLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLE 182 +LREAL++ W ++ DL ++VG + +VA+ A+ +G A A +L + Sbjct 137 NLREALTEQWGQRDDAPPMIKRLAFDLLSLVGLGLALVASFAIASVGGA-AGAYLLDLVG 195 Query 183 IPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQ 242 + + + + L+ + +W++F W+I RLPREPV +AA+A L+ A+GF + +Q Sbjct 196 LGEVGWARFLLGVAAFLLGLAGNWLVFLWVIARLPREPVSFRSAAKAALIGAIGFAILQQ 255 Query 243 VGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 V +YL + SPAGA FG +LGL++F F T+ +LF TAWAA+A Sbjct 256 VMVVYLGTIGNSPAGAAFGSILGLLIFIFFTSRFLLFVTAWAASAE 301 >gi|227541839|ref|ZP_03971888.1| ribonuclease [Corynebacterium glucuronolyticum ATCC 51866] gi|227182282|gb|EEI63254.1| ribonuclease [Corynebacterium glucuronolyticum ATCC 51866] Length=361 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 101/283 (36%), Positives = 176/283 (63%), Gaps = 0/283 (0%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 E V+D+LR ++GW DH++R R+ + G+ +AAG+TY+++ ++FPLLM+ FG+ GF L Sbjct 24 EQSVVDKLRDKWGWFDHIMRMNERYGEMGGNQYAAGITYFSVLSLFPLLMLAFGLAGFFL 83 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 RPELL +EE+I +S+SG +G+ + ++++AID +V IG TA W GLGWM +LR Sbjct 84 KNRPELLAQIEEQITSSLSGELGETVNQVVSTAIDQAGAVFSIGALTALWSGLGWMNNLR 143 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQ 185 +SQ W ++ KL DL ++G + + +T +G + +L L++ Q Sbjct 144 FGVSQQWKIDPTGGNFVMNKLRDLLGLLGLMLTLSLAFGVTAVGSSGLTHRILELLQLEQ 203 Query 186 FSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGA 245 I +++++ + ++++F W+I +PR + +AA+ L+ A+ FE+FKQ+G+ Sbjct 204 VPGIGAITTIVAIILGIGANFLVFFWLIKYMPRGKTPVKSAAQGALIGALIFEVFKQLGS 263 Query 246 IYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 ++ L +PAGA FGP++G+MV + ++L+ +AWAAT Sbjct 264 MFFSNALSNPAGATFGPIIGIMVLLYFIWRILLYCSAWAATTE 306 >gi|19551908|ref|NP_599910.1| hypothetical protein NCgl0648 [Corynebacterium glutamicum ATCC 13032] gi|62389567|ref|YP_224969.1| ribonuclease BN family membrane protein [Corynebacterium glutamicum ATCC 13032] gi|145294851|ref|YP_001137672.1| hypothetical protein cgR_0798 [Corynebacterium glutamicum R] gi|21323444|dbj|BAB98071.1| tRNA-processing ribonuclease BN [Corynebacterium glutamicum ATCC 13032] gi|41324901|emb|CAF19383.1| membrane protein ribonuclease BN-like family [Corynebacterium glutamicum ATCC 13032] gi|140844771|dbj|BAF53770.1| hypothetical protein [Corynebacterium glutamicum R] gi|344043813|gb|EGV39501.1| hypothetical protein CgS9114_13581 [Corynebacterium glutamicum S9114] Length=361 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 104/286 (37%), Positives = 176/286 (62%), Gaps = 6/286 (2%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 EPG++D+LR + W DH++R RF + G+ +AG+TY+++ +IFP+ M+ FG+ G L Sbjct 24 EPGLVDKLRDKHDWFDHLMRMNERFGAKGGNQLSAGITYFSVLSIFPIAMLVFGIAGVIL 83 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 + PE+LT ++ RI ++ G +G + +++SAI R +V IG TA W GLGWM +LR Sbjct 84 AGNPEVLTDIQNRINDALEGEIGNTVNGIIDSAIAQRGAVLGIGGVTALWSGLGWMANLR 143 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWL---E 182 +S+MWA +++ KL+DL A++ + + +T LG + +L ++ E Sbjct 144 FGVSRMWAIDPTEGNFIQKKLTDLVALIVLLLAMGVAFGITALGASGLTKNLLDFVGLGE 203 Query 183 IPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQ 242 IP S + ++ LV VL ++++F W+I LPR V + +A L+ A+GFE+ KQ Sbjct 204 IPGISYITWV---VAALVGVLANFLVFMWLIFSLPRTKVPMKPGLQAALLGAIGFEVVKQ 260 Query 243 VGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 VG++ L +PAGA FGP++G+MV ++ ++++ +AWAAT+ Sbjct 261 VGSLLASNALSNPAGAAFGPIIGIMVVLYLIWRILMYCSAWAATSE 306 >gi|237786124|ref|YP_002906829.1| hypothetical protein ckrop_1558 [Corynebacterium kroppenstedtii DSM 44385] gi|237759036|gb|ACR18286.1| putative membrane protein [Corynebacterium kroppenstedtii DSM 44385] Length=371 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 95/283 (34%), Positives = 172/283 (61%), Gaps = 0/283 (0%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 E +++ R RF WLDH++R R++++ G+ FAAG+TY+++ ++ P++++ F GF L Sbjct 28 ELSKMEKARLRFPWLDHLMRMQDRYSEQGGNHFAAGITYFSVLSLIPIMLIVFAGFGFVL 87 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 + + +E++I + + L L+++A++ R+S+GVIGL TA W GLGWM +LR Sbjct 88 AGNDAAMDKVEQQILDLGTSGLKDTLQTLVDTAVERRSSIGVIGLLTALWTGLGWMGNLR 147 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQ 185 +S+MW + P +++ KLSDL ++G V VA +T +G + L ++E+ Sbjct 148 LGVSEMWKVKITPDNFVKGKLSDLIGLIGLLVAFVAAFVVTAIGSSSLTKKFLEYIELDS 207 Query 186 FSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGA 245 + ++ +V +L ++++F W++ LPRE V + +A ++ AV FEL KQ GA Sbjct 208 VPGIHFVTWLVAFIVGLLANYIVFVWLLKFLPREKVPWKSVLQAAIIGAVAFELIKQFGA 267 Query 246 IYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 +++ + +PA A FGPV+ +MV ++ ++L+ +AWAAT Sbjct 268 VFISATMNNPAAAAFGPVIAIMVLFYLIWRVVLYCSAWAATTQ 310 >gi|260579132|ref|ZP_05847024.1| ribonuclease [Corynebacterium jeikeium ATCC 43734] gi|258602731|gb|EEW16016.1| ribonuclease [Corynebacterium jeikeium ATCC 43734] Length=360 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 100/281 (36%), Positives = 168/281 (60%), Gaps = 0/281 (0%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 +PG LD+ R ++ WLDHV+R R+ ++ G+ +AAG+TY+++ IFPL+M+ V L Sbjct 23 DPGPLDKYRDKWPWLDHVLRMQDRYTEQGGNQYAAGITYFSVMTIFPLMMLTLAVLAMIL 82 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 + LL + +++ G +G+ L ++ +I+ R SV IGL A W GLGW+ HLR Sbjct 83 AGNERLLNDVMDKVANMGDGNMGEVLQTIIEQSIEQRKSVFSIGLLLALWTGLGWIAHLR 142 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQ 185 +S+MW PAG++ K+ DL ++G V ++A A+T +G++ +L + + Sbjct 143 LGVSEMWKVDGKPAGFVSGKVKDLIGLIGLLVSLIAAFAITTIGNSGLTTQLLDAVGLAD 202 Query 186 FSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGA 245 I +++LV+++ ++ +F WMI LPR V +A +A ++ AV FE+FKQ Sbjct 203 VPGIRYITFAVALLVALIANFCVFFWMILYLPRTKVPRRSAVKAAIIGAVLFEVFKQFAT 262 Query 246 IYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAAT 286 ++ L +PAGA FGPV+G+MV + ++L+ +AWAAT Sbjct 263 VFFSNALSNPAGAAFGPVIGVMVLMYFIWRILLYCSAWAAT 303 >gi|68536778|ref|YP_251483.1| hypothetical protein jk1688 [Corynebacterium jeikeium K411] gi|68264377|emb|CAI37865.1| putative membrane protein [Corynebacterium jeikeium K411] Length=360 Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 101/281 (36%), Positives = 167/281 (60%), Gaps = 0/281 (0%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 +PG LD+ R ++ WLDHV+R R+ ++ G+ +AAG+TY+++ IFPL+M+ V L Sbjct 23 DPGPLDKYRDKWPWLDHVLRMQDRYTEQGGNQYAAGITYFSVMTIFPLMMLTLAVLAMIL 82 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 + LL + +++ G +G L ++ +I+ R SV IGL A W GLGWM HLR Sbjct 83 AGNERLLNDVMDKVANMGDGNMGGVLQTIIEQSIEQRKSVFSIGLLLALWTGLGWMAHLR 142 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQ 185 +S+MW PAG++ K+ DL ++G V ++A A+T +G++ +L + + Sbjct 143 LGVSEMWKVDGKPAGFVSGKVKDLIGLIGLLVSLIAAFAITTIGNSGLTTQLLDAVGLAD 202 Query 186 FSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGA 245 I +++LV+++ ++ +F WMI LPR V +A +A ++ AV FE+FKQ Sbjct 203 VPGIRYITFAVALLVALIANFCVFFWMILYLPRTKVPRRSAVKAAIIGAVLFEVFKQFAT 262 Query 246 IYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAAT 286 ++ L +PAGA FGPV+G+MV + ++L+ +AWAAT Sbjct 263 VFFSNALSNPAGAAFGPVIGVMVLMYFIWRILLYCSAWAAT 303 >gi|38233243|ref|NP_939010.1| hypothetical protein DIP0636 [Corynebacterium diphtheriae NCTC 13129] gi|38199502|emb|CAE49153.1| Putative membrane protein [Corynebacterium diphtheriae] Length=386 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/286 (34%), Positives = 169/286 (60%), Gaps = 6/286 (2%) Query 6 EPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFAL 65 +PG++D+LR ++GW DH++R R++ G+ ++AG+TY+++ ++FP+LM+ L Sbjct 52 DPGIVDKLRLKWGWFDHLMRMNERYSQEGGNQYSAGITYFSVLSMFPILMLVMAAAATIL 111 Query 66 SRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLR 125 +R+PE L L+ERI SV ++ L +++++AI R ++ IG TA W GL WM HLR Sbjct 112 ARQPETLQQLQERITDSVDASIADTLKEILDTAISQRGAMFGIGGLTALWSGLSWMSHLR 171 Query 126 EALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWL---E 182 S+MW +PV + +TK D + V + + +T +G + ++ + + Sbjct 172 YGASKMWRYPVTGDNFAKTKFQDFLGFLSLLVAMGIALGITAIGSSGLTTQLIDAIGLAD 231 Query 183 IPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQ 242 +P + + IS++V ++ ++ +F W+I LPR V +A +A + AV FE+FKQ Sbjct 232 VPGIFLLTFV---ISLVVGLIANFCVFLWLIKYLPRGEVPAKSALKAAGIGAVLFEIFKQ 288 Query 243 VGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATAS 288 + + + L +PAGA FGP++GLMV + ++++ AWAAT + Sbjct 289 LASQFFSNALSNPAGATFGPIIGLMVLLYFVWRILMYCCAWAATTA 334 Lambda K H 0.329 0.140 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 470845709104 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40