BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3337
Length=128
Score E
Sequences producing significant alignments: (Bits) Value
gi|57117091|ref|NP_217854.2| hypothetical protein Rv3337 [Mycoba... 257 4e-67
gi|289755463|ref|ZP_06514841.1| LOW QUALITY PROTEIN: conserved h... 169 1e-40
gi|31794522|ref|NP_857015.1| hypothetical protein Mb3370 [Mycoba... 169 1e-40
gi|289752038|ref|ZP_06511416.1| conserved hypothetical protein [... 169 1e-40
gi|289576065|ref|ZP_06456292.1| LOW QUALITY PROTEIN: alpha/beta ... 169 1e-40
gi|340628322|ref|YP_004746774.1| hypothetical protein MCAN_33651... 166 1e-39
gi|15827288|ref|NP_301551.1| hydrolase [Mycobacterium leprae TN]... 111 4e-23
gi|2326680|emb|CAB10983.1| hypothetical protein MLCB1779.02 [Myc... 111 4e-23
gi|240169087|ref|ZP_04747746.1| hypothetical protein MkanA1_0722... 103 1e-20
gi|296168846|ref|ZP_06850518.1| alpha/beta hydrolase [Mycobacter... 99.8 1e-19
gi|126433839|ref|YP_001069530.1| alpha/beta hydrolase fold prote... 90.5 8e-17
gi|108798181|ref|YP_638378.1| alpha/beta hydrolase fold protein ... 90.1 9e-17
gi|41409552|ref|NP_962388.1| hypothetical protein MAP3454 [Mycob... 87.8 4e-16
gi|145225450|ref|YP_001136128.1| alpha/beta hydrolase fold prote... 86.7 1e-15
gi|118471160|ref|YP_886032.1| alpha/beta hydrolase [Mycobacteriu... 85.5 2e-15
gi|183981209|ref|YP_001849500.1| hypothetical protein MMAR_1187 ... 83.2 1e-14
gi|169630764|ref|YP_001704413.1| hypothetical protein MAB_3685 [... 82.4 2e-14
gi|120402562|ref|YP_952391.1| alpha/beta hydrolase fold protein ... 79.3 2e-13
gi|342861558|ref|ZP_08718205.1| hypothetical protein MCOL_21836 ... 77.0 8e-13
gi|118464143|ref|YP_883448.1| alpha/beta hydrolase [Mycobacteriu... 76.6 1e-12
gi|336459579|gb|EGO38514.1| putative hydrolase or acyltransferas... 75.5 2e-12
gi|254820255|ref|ZP_05225256.1| hydrolase, alpha/beta fold famil... 66.6 1e-09
gi|312140851|ref|YP_004008187.1| alpha/beta hydrolase [Rhodococc... 55.1 3e-06
gi|325675511|ref|ZP_08155195.1| alpha/beta hydrolase [Rhodococcu... 53.9 8e-06
gi|331698805|ref|YP_004335044.1| alpha/beta hydrolase fold prote... 47.0 8e-04
gi|340622597|ref|YP_004741049.1| beta-ketoadipate enol-lactone h... 47.0 0.001
gi|40445287|ref|NP_954747.1| epoxide hydrolase [Gordonia westfal... 42.4 0.021
gi|94309074|ref|YP_582284.1| haloacetate dehalogenase [Cupriavid... 42.0 0.034
gi|89056523|ref|YP_511974.1| alpha/beta hydrolase [Jannaschia sp... 41.2 0.049
gi|326332625|ref|ZP_08198893.1| putative hydrolase [Nocardioidac... 40.8 0.060
gi|319778011|ref|YP_004134441.1| flavin reductase domain protein... 40.4 0.081
gi|54024729|ref|YP_118971.1| putative hydrolase [Nocardia farcin... 40.4 0.096
gi|337270422|ref|YP_004614477.1| flavin reductase domain-contain... 40.4 0.097
gi|325673116|ref|ZP_08152810.1| haloacetate dehalogenase H-1 [Rh... 39.7 0.13
gi|309811401|ref|ZP_07705188.1| hydrolase, alpha/beta domain pro... 39.7 0.13
gi|297559805|ref|YP_003678779.1| alpha/beta hydrolase [Nocardiop... 39.7 0.14
gi|327440265|dbj|BAK16630.1| predicted hydrolase or acyltransfer... 39.7 0.15
gi|312141626|ref|YP_004008962.1| alpha/beta hydrolase [Rhodococc... 39.7 0.15
gi|71909446|ref|YP_287033.1| Alpha/beta hydrolase fold [Dechloro... 39.7 0.17
gi|163795048|ref|ZP_02189017.1| possible epoxide hydrolase [alph... 39.3 0.17
gi|296139537|ref|YP_003646780.1| alpha/beta hydrolase fold prote... 39.3 0.18
gi|253577381|ref|ZP_04854697.1| hydrolase [Paenibacillus sp. ora... 39.3 0.19
gi|167629957|ref|YP_001680456.1| alpha/beta hydrolase fold [Heli... 39.3 0.19
gi|302520452|ref|ZP_07272794.1| short chain dehydrogenase [Strep... 39.3 0.21
gi|27375529|ref|NP_767058.1| epoxide hydrolase [Bradyrhizobium j... 39.3 0.22
gi|90420185|ref|ZP_01228093.1| alpha/beta hydrolase family prote... 38.9 0.23
gi|163846585|ref|YP_001634629.1| alpha/beta hydrolase fold-conta... 38.9 0.23
gi|219849286|ref|YP_002463719.1| alpha/beta hydrolase fold prote... 38.9 0.24
gi|318061340|ref|ZP_07980061.1| short chain dehydrogenase [Strep... 38.9 0.29
gi|333025784|ref|ZP_08453848.1| putative short chain dehydrogena... 38.5 0.29
>gi|57117091|ref|NP_217854.2| hypothetical protein Rv3337 [Mycobacterium tuberculosis H37Rv]
gi|38490356|emb|CAA17109.2| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|344221178|gb|AEN01809.1| hypothetical protein MTCTRI2_3410 [Mycobacterium tuberculosis
CTRI-2]
Length=128
Score = 257 bits (656), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/128 (99%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 1 VPSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT 60
+PSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT
Sbjct 1 MPSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT 60
Query 61 GRFEVFAPTMAGHNGGPASGTRFCPRRCWPTTSNASSTNWAGKPAISSATRWAAGSRSNS 120
GRFEVFAPTMAGHNGGPASGTRFCPRRCWPTTSNASSTNWAGKPAISSATRWAAGSRSNS
Sbjct 61 GRFEVFAPTMAGHNGGPASGTRFCPRRCWPTTSNASSTNWAGKPAISSATRWAAGSRSNS 120
Query 121 NDVAGHAA 128
NDVAGHAA
Sbjct 121 NDVAGHAA 128
>gi|289755463|ref|ZP_06514841.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis EAS054]
gi|289696050|gb|EFD63479.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis EAS054]
Length=129
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/84 (98%), Positives = 83/84 (99%), Gaps = 0/84 (0%)
Query 1 VPSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT 60
+PSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT
Sbjct 1 MPSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT 60
Query 61 GRFEVFAPTMAGHNGGPASGTRFC 84
GRFEVFAPTMAGHNGGPASGTRF
Sbjct 61 GRFEVFAPTMAGHNGGPASGTRFL 84
>gi|31794522|ref|NP_857015.1| hypothetical protein Mb3370 [Mycobacterium bovis AF2122/97]
gi|121639266|ref|YP_979490.1| hypothetical protein BCG_3408 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991763|ref|YP_002646452.1| hypothetical protein JTY_3408 [Mycobacterium bovis BCG str. Tokyo
172]
10 more sequence titles
Length=297
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/84 (98%), Positives = 83/84 (99%), Gaps = 0/84 (0%)
Query 1 VPSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT 60
+PSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT
Sbjct 1 MPSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT 60
Query 61 GRFEVFAPTMAGHNGGPASGTRFC 84
GRFEVFAPTMAGHNGGPASGTRF
Sbjct 61 GRFEVFAPTMAGHNGGPASGTRFL 84
>gi|289752038|ref|ZP_06511416.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289692625|gb|EFD60054.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=297
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/84 (98%), Positives = 83/84 (99%), Gaps = 0/84 (0%)
Query 1 VPSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT 60
+PSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT
Sbjct 1 MPSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT 60
Query 61 GRFEVFAPTMAGHNGGPASGTRFC 84
GRFEVFAPTMAGHNGGPASGTRF
Sbjct 61 GRFEVFAPTMAGHNGGPASGTRFL 84
>gi|289576065|ref|ZP_06456292.1| LOW QUALITY PROTEIN: alpha/beta hydrolase fold-containing protein
[Mycobacterium tuberculosis K85]
gi|289540496|gb|EFD45074.1| LOW QUALITY PROTEIN: alpha/beta hydrolase fold-containing protein
[Mycobacterium tuberculosis K85]
Length=294
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/84 (98%), Positives = 83/84 (99%), Gaps = 0/84 (0%)
Query 1 VPSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT 60
+PSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT
Sbjct 1 MPSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADT 60
Query 61 GRFEVFAPTMAGHNGGPASGTRFC 84
GRFEVFAPTMAGHNGGPASGTRF
Sbjct 61 GRFEVFAPTMAGHNGGPASGTRFL 84
>gi|340628322|ref|YP_004746774.1| hypothetical protein MCAN_33651 [Mycobacterium canettii CIPT
140010059]
gi|340006512|emb|CCC45696.1| putative uncharacterized protein [Mycobacterium canettii CIPT
140010059]
Length=297
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/82 (98%), Positives = 81/82 (99%), Gaps = 0/82 (0%)
Query 3 SPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGR 62
SPSTTGHHAACGTGGTGFSVGSMRSPIR+GSGEPVLLLHPFLMSQTVWEKVAQQLADTGR
Sbjct 3 SPSTTGHHAACGTGGTGFSVGSMRSPIRLGSGEPVLLLHPFLMSQTVWEKVAQQLADTGR 62
Query 63 FEVFAPTMAGHNGGPASGTRFC 84
FEVFAPTMAGHNGGPASGTRF
Sbjct 63 FEVFAPTMAGHNGGPASGTRFL 84
>gi|15827288|ref|NP_301551.1| hydrolase [Mycobacterium leprae TN]
gi|221229766|ref|YP_002503182.1| putative hydrolase [Mycobacterium leprae Br4923]
gi|467192|gb|AAA17350.1| tpeA [Mycobacterium leprae]
gi|13092837|emb|CAC30194.1| putative hydrolase [Mycobacterium leprae]
gi|219932873|emb|CAR70779.1| putative hydrolase [Mycobacterium leprae Br4923]
Length=303
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/71 (74%), Positives = 60/71 (85%), Gaps = 0/71 (0%)
Query 11 AACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTM 70
ACGT GT F VGSMR PI +GSGEPVLLLHPF+MSQTVWE VA QLA+T R+EVFAPTM
Sbjct 13 VACGTRGTTFRVGSMRQPIHLGSGEPVLLLHPFMMSQTVWEIVAPQLANTERYEVFAPTM 72
Query 71 AGHNGGPASGT 81
A H+GGP++ +
Sbjct 73 AAHHGGPSASS 83
>gi|2326680|emb|CAB10983.1| hypothetical protein MLCB1779.02 [Mycobacterium leprae]
Length=292
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/71 (74%), Positives = 60/71 (85%), Gaps = 0/71 (0%)
Query 11 AACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTM 70
ACGT GT F VGSMR PI +GSGEPVLLLHPF+MSQTVWE VA QLA+T R+EVFAPTM
Sbjct 2 VACGTRGTTFRVGSMRQPIHLGSGEPVLLLHPFMMSQTVWEIVAPQLANTERYEVFAPTM 61
Query 71 AGHNGGPASGT 81
A H+GGP++ +
Sbjct 62 AAHHGGPSASS 72
>gi|240169087|ref|ZP_04747746.1| hypothetical protein MkanA1_07224 [Mycobacterium kansasii ATCC
12478]
Length=280
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/59 (80%), Positives = 53/59 (90%), Gaps = 0/59 (0%)
Query 26 RSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPASGTRFC 84
R+PI +GSGEPVLLLHPFL+SQ VWEKVA+QLADTGR+EVFAPTMA HNGGP +GT F
Sbjct 4 RAPIHLGSGEPVLLLHPFLLSQAVWEKVARQLADTGRYEVFAPTMASHNGGPRAGTWFL 62
>gi|296168846|ref|ZP_06850518.1| alpha/beta hydrolase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896463|gb|EFG76113.1| alpha/beta hydrolase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=288
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/59 (78%), Positives = 51/59 (87%), Gaps = 0/59 (0%)
Query 26 RSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPASGTRFC 84
R PI +GSGEPVLLLHPFL+SQ VW VAQ+LADTGR+EVFAPTMAGHNGGP +GT F
Sbjct 11 RPPIHLGSGEPVLLLHPFLLSQAVWADVAQRLADTGRYEVFAPTMAGHNGGPPAGTWFL 69
>gi|126433839|ref|YP_001069530.1| alpha/beta hydrolase fold protein [Mycobacterium sp. JLS]
gi|126233639|gb|ABN97039.1| alpha/beta hydrolase fold protein [Mycobacterium sp. JLS]
Length=284
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (88%), Gaps = 2/56 (3%)
Query 23 GSM--RSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGG 76
GSM R+PI VGSGEP+LLLHPF+MSQ VW+KVA +ADTGR+EV+APTM GHNGG
Sbjct 3 GSMTERAPIHVGSGEPILLLHPFMMSQNVWKKVAPAIADTGRYEVYAPTMPGHNGG 58
>gi|108798181|ref|YP_638378.1| alpha/beta hydrolase fold protein [Mycobacterium sp. MCS]
gi|119867277|ref|YP_937229.1| alpha/beta hydrolase fold protein [Mycobacterium sp. KMS]
gi|108768600|gb|ABG07322.1| alpha/beta hydrolase fold protein [Mycobacterium sp. MCS]
gi|119693366|gb|ABL90439.1| alpha/beta hydrolase fold protein [Mycobacterium sp. KMS]
Length=284
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (88%), Gaps = 2/56 (3%)
Query 23 GSM--RSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGG 76
GSM R+PI VGSGEP+LLLHPF+MSQ VW+KVA +ADTGR+EV+APTM GHNGG
Sbjct 3 GSMTERAPIHVGSGEPILLLHPFMMSQNVWKKVAPAIADTGRYEVYAPTMPGHNGG 58
>gi|41409552|ref|NP_962388.1| hypothetical protein MAP3454 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398383|gb|AAS06004.1| hypothetical protein MAP_3454 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=284
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/60 (74%), Positives = 50/60 (84%), Gaps = 4/60 (6%)
Query 26 RSPIRVG----SGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPASGT 81
R+PI +G SGEPV+LLH FLMSQTVW VA +LADTGR+EVFAPTMAGHNGGP +GT
Sbjct 4 RAPIHLGPKDGSGEPVVLLHGFLMSQTVWHPVAPRLADTGRYEVFAPTMAGHNGGPYAGT 63
>gi|145225450|ref|YP_001136128.1| alpha/beta hydrolase fold protein [Mycobacterium gilvum PYR-GCK]
gi|315445803|ref|YP_004078682.1| hydrolase or acyltransferase of alpha/beta superfamily [Mycobacterium
sp. Spyr1]
gi|145217936|gb|ABP47340.1| alpha/beta hydrolase fold protein [Mycobacterium gilvum PYR-GCK]
gi|315264106|gb|ADU00848.1| predicted hydrolase or acyltransferase of alpha/beta superfamily
[Mycobacterium sp. Spyr1]
Length=277
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/56 (72%), Positives = 44/56 (79%), Gaps = 0/56 (0%)
Query 26 RSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPASGT 81
R PI G+GEP++LLHPFL SQ VW VA QLADT RFEVFAPTM GH+GGP S T
Sbjct 4 REPIHRGTGEPIVLLHPFLCSQNVWRTVADQLADTERFEVFAPTMVGHHGGPKSPT 59
>gi|118471160|ref|YP_886032.1| alpha/beta hydrolase [Mycobacterium smegmatis str. MC2 155]
gi|118172447|gb|ABK73343.1| hydrolase, alpha/beta fold family protein, putative [Mycobacterium
smegmatis str. MC2 155]
Length=279
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/56 (72%), Positives = 47/56 (84%), Gaps = 4/56 (7%)
Query 26 RSPIRVGS----GEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGP 77
R+PI +GS EP+LLLHPFL+SQ+VW+ VA QLADTGR+EVFAPTMA HNGGP
Sbjct 4 RAPIHLGSRDGNTEPILLLHPFLLSQSVWKYVAPQLADTGRYEVFAPTMADHNGGP 59
>gi|183981209|ref|YP_001849500.1| hypothetical protein MMAR_1187 [Mycobacterium marinum M]
gi|183174535|gb|ACC39645.1| conserved membrane protein [Mycobacterium marinum M]
Length=266
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/47 (79%), Positives = 43/47 (92%), Gaps = 0/47 (0%)
Query 37 VLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPASGTRF 83
+LLLHPFL+SQ VWE+VAQ+LADTGR+EVFAPTMA HNGGP +GT F
Sbjct 1 MLLLHPFLLSQAVWEQVAQRLADTGRYEVFAPTMASHNGGPRAGTWF 47
>gi|169630764|ref|YP_001704413.1| hypothetical protein MAB_3685 [Mycobacterium abscessus ATCC 19977]
gi|169242731|emb|CAM63759.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=292
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/51 (73%), Positives = 44/51 (87%), Gaps = 1/51 (1%)
Query 26 RSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGG 76
R+PI +G GEPVLLLHPF++SQ+VWE VA+QLAD G +EVFAPT GHNGG
Sbjct 13 RAPIEMGEGEPVLLLHPFMLSQSVWETVAEQLADAG-YEVFAPTYPGHNGG 62
>gi|120402562|ref|YP_952391.1| alpha/beta hydrolase fold protein [Mycobacterium vanbaalenii
PYR-1]
gi|119955380|gb|ABM12385.1| alpha/beta hydrolase fold protein [Mycobacterium vanbaalenii
PYR-1]
Length=285
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/63 (62%), Positives = 45/63 (72%), Gaps = 10/63 (15%)
Query 24 SMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLAD----------TGRFEVFAPTMAGH 73
++R PI +GSGEPVLLLHPF+MSQ VW+ VA QLA TGR+EV APTM GH
Sbjct 2 NLREPIHLGSGEPVLLLHPFMMSQNVWKDVAPQLAGVDVANPSAPATGRYEVLAPTMPGH 61
Query 74 NGG 76
NGG
Sbjct 62 NGG 64
>gi|342861558|ref|ZP_08718205.1| hypothetical protein MCOL_21836 [Mycobacterium colombiense CECT
3035]
gi|342131047|gb|EGT84336.1| hypothetical protein MCOL_21836 [Mycobacterium colombiense CECT
3035]
Length=268
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/43 (84%), Positives = 39/43 (91%), Gaps = 0/43 (0%)
Query 39 LLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPASGT 81
+LH FLMSQTVWE VA +LADTGRFEVFAPTMAGHNGGP +GT
Sbjct 1 MLHGFLMSQTVWEPVAPRLADTGRFEVFAPTMAGHNGGPYAGT 43
>gi|118464143|ref|YP_883448.1| alpha/beta hydrolase [Mycobacterium avium 104]
gi|118165430|gb|ABK66327.1| hydrolase, alpha/beta fold family protein, putative [Mycobacterium
avium 104]
Length=265
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/44 (80%), Positives = 40/44 (91%), Gaps = 0/44 (0%)
Query 38 LLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPASGT 81
+LLH FLMSQTVW+ VA +LADTGR+EVFAPTMAGHNGGP +GT
Sbjct 1 MLLHGFLMSQTVWDPVAPRLADTGRYEVFAPTMAGHNGGPYAGT 44
>gi|336459579|gb|EGO38514.1| putative hydrolase or acyltransferase of alpha/beta superfamily
[Mycobacterium avium subsp. paratuberculosis S397]
Length=265
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/44 (80%), Positives = 39/44 (89%), Gaps = 0/44 (0%)
Query 38 LLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPASGT 81
+LLH FLMSQTVW VA +LADTGR+EVFAPTMAGHNGGP +GT
Sbjct 1 MLLHGFLMSQTVWHPVAPRLADTGRYEVFAPTMAGHNGGPYAGT 44
>gi|254820255|ref|ZP_05225256.1| hydrolase, alpha/beta fold family protein, putative [Mycobacterium
intracellulare ATCC 13950]
Length=262
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/37 (82%), Positives = 34/37 (92%), Gaps = 0/37 (0%)
Query 45 MSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPASGT 81
MSQTVW+ VA +LADTGR+EVFAPTMAGHNGGP +GT
Sbjct 1 MSQTVWDPVAPRLADTGRYEVFAPTMAGHNGGPYAGT 37
>gi|312140851|ref|YP_004008187.1| alpha/beta hydrolase [Rhodococcus equi 103S]
gi|311890190|emb|CBH49508.1| putative alpha/beta hydrolase [Rhodococcus equi 103S]
Length=271
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/53 (57%), Positives = 34/53 (65%), Gaps = 2/53 (3%)
Query 25 MRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGP 77
M S R GSGEPVLLLH F +S VW +VA LA ++V A TM GH GGP
Sbjct 1 MTSAYRRGSGEPVLLLHGFTLSHHVWHRVADDLASD--YDVLALTMPGHWGGP 51
>gi|325675511|ref|ZP_08155195.1| alpha/beta hydrolase [Rhodococcus equi ATCC 33707]
gi|325553482|gb|EGD23160.1| alpha/beta hydrolase [Rhodococcus equi ATCC 33707]
Length=272
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/51 (57%), Positives = 33/51 (65%), Gaps = 2/51 (3%)
Query 27 SPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGP 77
S R GSGEPVLLLH F +S VW +VA LA ++V A TM GH GGP
Sbjct 4 SAYRRGSGEPVLLLHGFTLSHHVWHRVADDLASD--YDVLALTMPGHWGGP 52
>gi|331698805|ref|YP_004335044.1| alpha/beta hydrolase fold protein [Pseudonocardia dioxanivorans
CB1190]
gi|326953494|gb|AEA27191.1| alpha/beta hydrolase fold protein [Pseudonocardia dioxanivorans
CB1190]
Length=276
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/49 (49%), Positives = 29/49 (60%), Gaps = 1/49 (2%)
Query 30 RVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPA 78
R G GEPV+LLHP +S VW + A +L G F+V AP GH PA
Sbjct 7 RAGRGEPVVLLHPLALSGAVWGEFATRLVAAG-FDVVAPDARGHGAEPA 54
>gi|340622597|ref|YP_004741049.1| beta-ketoadipate enol-lactone hydrolase I [Capnocytophaga canimorsus
Cc5]
gi|339902863|gb|AEK23942.1| Beta-ketoadipate enol-lactone hydrolase I [Capnocytophaga canimorsus
Cc5]
Length=258
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (48%), Positives = 30/46 (66%), Gaps = 2/46 (4%)
Query 32 GSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGP 77
G G+ V+LLH FL + T+WEK A++L+ T R V P +AGH P
Sbjct 15 GKGKAVILLHGFLENHTIWEKFAEELSATHR--VITPDLAGHGKTP 58
>gi|40445287|ref|NP_954747.1| epoxide hydrolase [Gordonia westfalica]
gi|40217317|emb|CAE09068.1| putative epoxide hydrolase [Gordonia westfalica]
Length=281
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/44 (48%), Positives = 28/44 (64%), Gaps = 1/44 (2%)
Query 33 SGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGG 76
GEP++LLH F T W VA+ LA+TG F V AP + G++ G
Sbjct 20 DGEPIVLLHGFPQDSTSWTAVAEILAETG-FRVLAPNLRGYSPG 62
>gi|94309074|ref|YP_582284.1| haloacetate dehalogenase [Cupriavidus metallidurans CH34]
gi|93352926|gb|ABF07015.1| haloacetate dehalogenase [Cupriavidus metallidurans CH34]
Length=299
Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/45 (52%), Positives = 28/45 (63%), Gaps = 2/45 (4%)
Query 29 IRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGH 73
+R GSG P+LLLH F S +W KVA LAD RF V A + G+
Sbjct 28 VRGGSGPPLLLLHGFPQSHLIWHKVAPALAD--RFTVIATDLRGY 70
>gi|89056523|ref|YP_511974.1| alpha/beta hydrolase [Jannaschia sp. CCS1]
gi|88866072|gb|ABD56949.1| alpha/beta hydrolase [Jannaschia sp. CCS1]
Length=294
Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/49 (39%), Positives = 30/49 (62%), Gaps = 2/49 (4%)
Query 30 RVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPA 78
R G+G P++LLH F + WE++A +LA+ RF+V P + G+ A
Sbjct 22 RAGTGTPLILLHGFPQNHRCWERIAPRLAE--RFDVIVPDLRGYGDSDA 68
>gi|326332625|ref|ZP_08198893.1| putative hydrolase [Nocardioidaceae bacterium Broad-1]
gi|325949626|gb|EGD41698.1| putative hydrolase [Nocardioidaceae bacterium Broad-1]
Length=269
Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/49 (43%), Positives = 27/49 (56%), Gaps = 2/49 (4%)
Query 30 RVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPA 78
R GSGEP+LL+H + W V ++LAD FEV + GH PA
Sbjct 6 RTGSGEPLLLIHGIAHRRQAWAGVVERLAD--EFEVITVDLPGHGESPA 52
>gi|319778011|ref|YP_004134441.1| flavin reductase domain protein fmn-binding protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317171730|gb|ADV15267.1| flavin reductase domain protein FMN-binding protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length=599
Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/49 (39%), Positives = 29/49 (60%), Gaps = 2/49 (4%)
Query 29 IRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGP 77
IR G+G PVL +H M+ +W+ +++AD+ F+V A M GH P
Sbjct 20 IRAGAGTPVLFIHGVGMNAAIWQPQFERMADS--FDVIAIDMLGHGQSP 66
>gi|54024729|ref|YP_118971.1| putative hydrolase [Nocardia farcinica IFM 10152]
gi|54016237|dbj|BAD57607.1| putative hydrolase [Nocardia farcinica IFM 10152]
Length=261
Score = 40.4 bits (93), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/46 (46%), Positives = 25/46 (55%), Gaps = 2/46 (4%)
Query 37 VLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPASGTR 82
V+L H MS W+ V L+D +VFAPT GH GGPA R
Sbjct 8 VVLFHGVTMSAAAWDDVVPHLSD--HHDVFAPTALGHRGGPAVRQR 51
>gi|337270422|ref|YP_004614477.1| flavin reductase domain-containing protein [Mesorhizobium opportunistum
WSM2075]
gi|336030732|gb|AEH90383.1| flavin reductase domain protein FMN-binding protein [Mesorhizobium
opportunistum WSM2075]
Length=597
Score = 40.4 bits (93), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/61 (40%), Positives = 30/61 (50%), Gaps = 10/61 (16%)
Query 17 GTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGG 76
GTGF IR GSG PVLL+H M+ T+W + D ++ A M GH G
Sbjct 17 GTGF--------IRAGSGAPVLLIHGVGMNATIWHDQIASMQDN--HDLIAIDMLGHGGS 66
Query 77 P 77
P
Sbjct 67 P 67
>gi|325673116|ref|ZP_08152810.1| haloacetate dehalogenase H-1 [Rhodococcus equi ATCC 33707]
gi|325556369|gb|EGD26037.1| haloacetate dehalogenase H-1 [Rhodococcus equi ATCC 33707]
Length=290
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/54 (43%), Positives = 32/54 (60%), Gaps = 3/54 (5%)
Query 21 SVGSMRSPIRV-GSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGH 73
VG ++ RV GSG P+LLLH + ++ VW +VA LAD RF V + G+
Sbjct 4 DVGEVQIATRVVGSGPPLLLLHGYPQTRRVWRRVADALAD--RFTVVTTDLRGY 55
>gi|309811401|ref|ZP_07705188.1| hydrolase, alpha/beta domain protein [Dermacoccus sp. Ellin185]
gi|308434708|gb|EFP58553.1| hydrolase, alpha/beta domain protein [Dermacoccus sp. Ellin185]
Length=290
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (60%), Gaps = 1/42 (2%)
Query 33 SGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHN 74
G PV+LLH F S W VA QLAD GR V AP + G++
Sbjct 33 DGAPVMLLHGFPESNAQWRSVAVQLADAGR-RVIAPNLRGYS 73
>gi|297559805|ref|YP_003678779.1| alpha/beta hydrolase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296844253|gb|ADH66273.1| alpha/beta hydrolase fold protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=298
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/68 (36%), Positives = 36/68 (53%), Gaps = 5/68 (7%)
Query 21 SVGSMRSPIRVG-SGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGH--NGGP 77
G +R +R+G G P+LLLH + + +W +VA LAD RF + + G+ + P
Sbjct 15 DAGGVRVNVRLGGDGPPLLLLHGYPQTHLIWHRVAPLLAD--RFTLVMTDLRGYGDSDKP 72
Query 78 ASGTRFCP 85
AS R P
Sbjct 73 ASDERHAP 80
>gi|327440265|dbj|BAK16630.1| predicted hydrolase or acyltransferase [Solibacillus silvestris
StLB046]
Length=244
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (43%), Positives = 31/49 (64%), Gaps = 2/49 (4%)
Query 25 MRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGH 73
M + R GSGE V+L+H FL S ++EK+ + L T +F+V A + GH
Sbjct 1 MLNYTRNGSGEVVVLVHGFLGSTAIFEKIMEPL--TKQFDVIAIDLPGH 47
>gi|312141626|ref|YP_004008962.1| alpha/beta hydrolase [Rhodococcus equi 103S]
gi|311890965|emb|CBH50284.1| putative alpha/beta hydrolase [Rhodococcus equi 103S]
Length=290
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/54 (43%), Positives = 32/54 (60%), Gaps = 3/54 (5%)
Query 21 SVGSMRSPIRV-GSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGH 73
VG ++ RV GSG P+LLLH + ++ VW +VA LAD RF V + G+
Sbjct 4 DVGEVQIATRVVGSGPPLLLLHGYPQTRRVWRRVADALAD--RFTVVTTDLRGY 55
>gi|71909446|ref|YP_287033.1| Alpha/beta hydrolase fold [Dechloromonas aromatica RCB]
gi|71849067|gb|AAZ48563.1| Alpha/beta hydrolase fold protein [Dechloromonas aromatica RCB]
Length=303
Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/64 (40%), Positives = 35/64 (55%), Gaps = 7/64 (10%)
Query 21 SVGSMRSPIRVGSGE---PVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGH--NG 75
VG+ R +RV E P+LLLH + + +W KVA L D RF + P + G+ +G
Sbjct 12 DVGATRIHVRVRENEGRPPLLLLHGYPETHAMWHKVASLLQD--RFSLVLPDLRGYGDSG 69
Query 76 GPAS 79
PAS
Sbjct 70 MPAS 73
>gi|163795048|ref|ZP_02189017.1| possible epoxide hydrolase [alpha proteobacterium BAL199]
gi|159179867|gb|EDP64394.1| possible epoxide hydrolase [alpha proteobacterium BAL199]
Length=302
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/94 (32%), Positives = 42/94 (45%), Gaps = 6/94 (6%)
Query 22 VGSMRSPIRV-GSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGH---NGGP 77
V + P+R GSG PVLLLH F + T W +VA L +G F V P + G+ G
Sbjct 19 VDGVDVPVRTAGSGPPVLLLHGFPQTHTAWHQVAPAL--SGEFTVVVPDLPGYGASRGLE 76
Query 78 ASGTRFCPRRCWPTTSNASSTNWAGKPAISSATR 111
+ +F R T G+ A++ R
Sbjct 77 PTAEKFAKRNLARLMVGLMDTLGHGRFALAGHDR 110
>gi|296139537|ref|YP_003646780.1| alpha/beta hydrolase fold protein [Tsukamurella paurometabola
DSM 20162]
gi|296027671|gb|ADG78441.1| alpha/beta hydrolase fold protein [Tsukamurella paurometabola
DSM 20162]
Length=322
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (60%), Gaps = 2/42 (4%)
Query 32 GSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGH 73
GSG VLLLH + VWE+V QL D R+ V AP + GH
Sbjct 33 GSGPVVLLLHGIADNSLVWEQVMVQLTD--RYTVIAPDLLGH 72
>gi|253577381|ref|ZP_04854697.1| hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843181|gb|EES71213.1| hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
Length=268
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/42 (48%), Positives = 26/42 (62%), Gaps = 2/42 (4%)
Query 32 GSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGH 73
G GE V+LLH F S WEKV LA+ +++V AP + GH
Sbjct 17 GQGETVVLLHGFCGSSAYWEKVQPLLAE--QYQVIAPDLRGH 56
>gi|167629957|ref|YP_001680456.1| alpha/beta hydrolase fold [Heliobacterium modesticaldum Ice1]
gi|167592697|gb|ABZ84445.1| alpha/beta hydrolase fold [Heliobacterium modesticaldum Ice1]
Length=288
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query 35 EPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPASGTRFCPRRCWPTTSN 94
EP+LLLH +W +A++LAD RF + AP M GH G+ + R+ N
Sbjct 26 EPILLLHGLGDHALIWVLLAERLAD--RFHIIAPDMRGHGESDKPGSGYTFRQVIADMEN 83
>gi|302520452|ref|ZP_07272794.1| short chain dehydrogenase [Streptomyces sp. SPB78]
gi|302429347|gb|EFL01163.1| short chain dehydrogenase [Streptomyces sp. SPB78]
Length=474
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/39 (52%), Positives = 25/39 (65%), Gaps = 2/39 (5%)
Query 37 VLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNG 75
VLL+H + SQ VWE+VA+ LAD RF V + GH G
Sbjct 199 VLLVHGYPDSQEVWEEVAEFLAD--RFHVVTYDVRGHGG 235
>gi|27375529|ref|NP_767058.1| epoxide hydrolase [Bradyrhizobium japonicum USDA 110]
gi|27348666|dbj|BAC45683.1| blr0418 [Bradyrhizobium japonicum USDA 110]
Length=322
Score = 39.3 bits (90), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/71 (36%), Positives = 33/71 (47%), Gaps = 8/71 (11%)
Query 2 PSPSTTGHHAACGTGGTGFSVGSMRSPIRVGSGEPVLLLHPFLMSQTVWEKVAQQLADTG 61
PS T H G F + +R G G+P+LLLH + WE V +LAD
Sbjct 30 PSGGTAMEHLTIKANGANFHL------VRAGKGKPLLLLHGWPEFWLTWEPVMVRLAD-- 81
Query 62 RFEVFAPTMAG 72
RF + AP + G
Sbjct 82 RFMLIAPDLRG 92
>gi|90420185|ref|ZP_01228093.1| alpha/beta hydrolase family protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335519|gb|EAS49269.1| alpha/beta hydrolase family protein [Aurantimonas manganoxydans
SI85-9A1]
Length=275
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/57 (37%), Positives = 27/57 (48%), Gaps = 2/57 (3%)
Query 31 VGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPASGTRFCPRR 87
V +G PVLLLH + ++ VW + L D R V P + GH P G R R
Sbjct 20 VNAGVPVLLLHGAVQTRAVWAGQVEALVD--RHRVIVPDLRGHGATPLGGERLTIDR 74
>gi|163846585|ref|YP_001634629.1| alpha/beta hydrolase fold-containing protein [Chloroflexus aurantiacus
J-10-fl]
gi|222524378|ref|YP_002568849.1| alpha/beta hydrolase fold protein [Chloroflexus sp. Y-400-fl]
gi|163667874|gb|ABY34240.1| alpha/beta hydrolase fold-containing protein [Chloroflexus aurantiacus
J-10-fl]
gi|222448257|gb|ACM52523.1| alpha/beta hydrolase fold protein [Chloroflexus sp. Y-400-fl]
Length=266
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/48 (42%), Positives = 27/48 (57%), Gaps = 2/48 (4%)
Query 32 GSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGPAS 79
GSG+PV+LLH F +S +W L D R + AP + G G PA+
Sbjct 17 GSGQPVVLLHAFPLSAALWRAQLSTLGD--RMRMIAPDLRGFGGSPAT 62
>gi|219849286|ref|YP_002463719.1| alpha/beta hydrolase fold protein [Chloroflexus aggregans DSM
9485]
gi|219543545|gb|ACL25283.1| alpha/beta hydrolase fold protein [Chloroflexus aggregans DSM
9485]
Length=265
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/47 (45%), Positives = 26/47 (56%), Gaps = 2/47 (4%)
Query 31 VGSGEPVLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNGGP 77
VGSG PV+LLH F +S +W AQ T RF + AP + G P
Sbjct 16 VGSGLPVVLLHAFPLSSALWR--AQLTTLTDRFRMIAPDLRGFGNSP 60
>gi|318061340|ref|ZP_07980061.1| short chain dehydrogenase [Streptomyces sp. SA3_actG]
gi|318078425|ref|ZP_07985757.1| short chain dehydrogenase [Streptomyces sp. SA3_actF]
Length=394
Score = 38.9 bits (89), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/39 (52%), Positives = 25/39 (65%), Gaps = 2/39 (5%)
Query 37 VLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNG 75
VLL+H + SQ VWE+VA+ LAD RF V + GH G
Sbjct 119 VLLVHGYPDSQEVWEEVAEFLAD--RFHVVTYDVRGHGG 155
>gi|333025784|ref|ZP_08453848.1| putative short chain dehydrogenase [Streptomyces sp. Tu6071]
gi|332745636|gb|EGJ76077.1| putative short chain dehydrogenase [Streptomyces sp. Tu6071]
Length=394
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/39 (52%), Positives = 25/39 (65%), Gaps = 2/39 (5%)
Query 37 VLLLHPFLMSQTVWEKVAQQLADTGRFEVFAPTMAGHNG 75
VLL+H + SQ VWE+VA+ LAD RF V + GH G
Sbjct 119 VLLVHGYPDSQEVWEEVAEFLAD--RFHVVTYDVRGHGG 155
Lambda K H
0.315 0.127 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128801298864
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40