BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3345c
Length=1538
Score E
Sequences producing significant alignments: (Bits) Value
gi|57117094|ref|YP_177962.1| PE-PGRS family protein [Mycobacteri... 2543 0.0
gi|339296173|gb|AEJ48284.1| hypothetical protein CCDC5079_3095 [... 2526 0.0
gi|339633355|ref|YP_004724997.1| PE-PGRS family protein [Mycobac... 238 7e-60
gi|148824551|ref|YP_001289305.1| PE-PGRS family protein [Mycobac... 236 3e-59
gi|15842940|ref|NP_337977.1| PE_PGRS family protein [Mycobacteri... 235 4e-59
gi|344221186|gb|AEN01817.1| PE-PGRS family protein [Mycobacteriu... 234 8e-59
gi|253800390|ref|YP_003033391.1| hypothetical protein TBMG_04106... 234 9e-59
gi|339299780|gb|AEJ51890.1| hypothetical protein CCDC5180_3053 [... 231 1e-57
gi|340628328|ref|YP_004746780.1| pe_pgrs50 protein [Mycobacteriu... 229 2e-57
gi|254552456|ref|ZP_05142903.1| hypothetical protein Mtube_18730... 223 2e-55
gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS... 149 3e-33
gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 149 3e-33
gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 149 3e-33
gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 149 4e-33
gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacteri... 148 1e-32
gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 148 1e-32
gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobac... 147 1e-32
gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 147 1e-32
gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobac... 147 2e-32
gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacter... 147 2e-32
gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [... 146 3e-32
gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 145 6e-32
gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 144 9e-32
gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 139 4e-30
gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacteri... 139 6e-30
gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobac... 138 7e-30
gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 138 9e-30
gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobac... 138 9e-30
gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531... 137 1e-29
gi|183985262|ref|YP_001853553.1| PE-PGRS family protein [Mycobac... 137 2e-29
gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 136 4e-29
gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 135 4e-29
gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacteriu... 135 8e-29
gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 132 4e-28
gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobac... 131 1e-27
gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobac... 130 2e-27
gi|183984569|ref|YP_001852860.1| PE-PGRS family protein [Mycobac... 129 5e-27
gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobac... 128 8e-27
gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacteri... 128 9e-27
gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 128 1e-26
gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacteri... 128 1e-26
gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted p... 127 1e-26
gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024... 127 2e-26
gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 126 3e-26
gi|183983743|ref|YP_001852034.1| PE-PGRS family protein [Mycobac... 125 9e-26
gi|118619508|ref|YP_907840.1| PE-PGRS family protein [Mycobacter... 125 9e-26
gi|183981221|ref|YP_001849512.1| PE-PGRS family protein [Mycobac... 122 8e-25
gi|340626464|ref|YP_004744916.1| PE-PGRS family protein [Mycobac... 119 4e-24
gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobac... 119 4e-24
gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacter... 118 1e-23
>gi|57117094|ref|YP_177962.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148663207|ref|YP_001284730.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7476148|pir||H70846 hypothetical glycine-rich protein Rv3345c - Mycobacterium tuberculosis
(strain H37RV)
gi|38490359|emb|CAE55587.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148507359|gb|ABQ75168.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1538
Score = 2543 bits (6590), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1538/1538 (100%), Positives = 1538/1538 (100%), Gaps = 0/1538 (0%)
Query 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA
Sbjct 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR
Sbjct 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
Query 121 PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLFGNGGSGGSGGAG 180
PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLFGNGGSGGSGGAG
Sbjct 121 PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLFGNGGSGGSGGAG 180
Query 181 AAGGVGGSGGWLNGNGGAGGAGGTGANGGAGGNAWLFGAGGSGGAGTNGGVGGSGGFVYG 240
AAGGVGGSGGWLNGNGGAGGAGGTGANGGAGGNAWLFGAGGSGGAGTNGGVGGSGGFVYG
Sbjct 181 AAGGVGGSGGWLNGNGGAGGAGGTGANGGAGGNAWLFGAGGSGGAGTNGGVGGSGGFVYG 240
Query 241 NGGAGGIGGIGGIGGNGGDAGLFGNGGAGGAGAAGLPGAAGLNGGDGSDGGNGGTGGNGG 300
NGGAGGIGGIGGIGGNGGDAGLFGNGGAGGAGAAGLPGAAGLNGGDGSDGGNGGTGGNGG
Sbjct 241 NGGAGGIGGIGGIGGNGGDAGLFGNGGAGGAGAAGLPGAAGLNGGDGSDGGNGGTGGNGG 300
Query 301 RGGLLVGNGGAGGAGGVGGDGGKGGAGDPSFAVNNGAGGNGGHGGNPGVGGAGGAGGLLA 360
RGGLLVGNGGAGGAGGVGGDGGKGGAGDPSFAVNNGAGGNGGHGGNPGVGGAGGAGGLLA
Sbjct 301 RGGLLVGNGGAGGAGGVGGDGGKGGAGDPSFAVNNGAGGNGGHGGNPGVGGAGGAGGLLA 360
Query 361 GAHGAAGATPTSGGNGGDGGIGATANSPLQAGGAGGNGGHGGLVGNGGTGGAGGAGHAGS 420
GAHGAAGATPTSGGNGGDGGIGATANSPLQAGGAGGNGGHGGLVGNGGTGGAGGAGHAGS
Sbjct 361 GAHGAAGATPTSGGNGGDGGIGATANSPLQAGGAGGNGGHGGLVGNGGTGGAGGAGHAGS 420
Query 421 TGATGTALQPTGGNGTNGGAGGHGGNGGNGGAQHGDGGVGGKGGAGGSGGAGGNGFDAAT 480
TGATGTALQPTGGNGTNGGAGGHGGNGGNGGAQHGDGGVGGKGGAGGSGGAGGNGFDAAT
Sbjct 421 TGATGTALQPTGGNGTNGGAGGHGGNGGNGGAQHGDGGVGGKGGAGGSGGAGGNGFDAAT 480
Query 481 LGSPGADGGMGGNGGKGGDGGKAGDGGAGAAGDVTLAVNQGAGGDGGNGGEVGVGGKGGA 540
LGSPGADGGMGGNGGKGGDGGKAGDGGAGAAGDVTLAVNQGAGGDGGNGGEVGVGGKGGA
Sbjct 481 LGSPGADGGMGGNGGKGGDGGKAGDGGAGAAGDVTLAVNQGAGGDGGNGGEVGVGGKGGA 540
Query 541 GGVSANPALNGSAGANGTAPTSGGNGGNGGAGATPTVAGENGGAGGNGGHGGSVGNGGAG 600
GGVSANPALNGSAGANGTAPTSGGNGGNGGAGATPTVAGENGGAGGNGGHGGSVGNGGAG
Sbjct 541 GGVSANPALNGSAGANGTAPTSGGNGGNGGAGATPTVAGENGGAGGNGGHGGSVGNGGAG 600
Query 601 GAGGNGVAGTGLALNGGNGGNGGIGGNGGSAAGTGGDGGKGGNGGAGANGQDFSASANGA 660
GAGGNGVAGTGLALNGGNGGNGGIGGNGGSAAGTGGDGGKGGNGGAGANGQDFSASANGA
Sbjct 601 GAGGNGVAGTGLALNGGNGGNGGIGGNGGSAAGTGGDGGKGGNGGAGANGQDFSASANGA 660
Query 661 NGGQGGNGGNGGIGGKGGDAFATFAKAGNGGAGGNGGNVGVAGQGGAGGKGAIPAMKGAT 720
NGGQGGNGGNGGIGGKGGDAFATFAKAGNGGAGGNGGNVGVAGQGGAGGKGAIPAMKGAT
Sbjct 661 NGGQGGNGGNGGIGGKGGDAFATFAKAGNGGAGGNGGNVGVAGQGGAGGKGAIPAMKGAT 720
Query 721 GADGTAPTSGGDGGNGGNGASPTVAGGNGGDGGKGGSGGNVGNGGNGGAGGNGAAGQAGT 780
GADGTAPTSGGDGGNGGNGASPTVAGGNGGDGGKGGSGGNVGNGGNGGAGGNGAAGQAGT
Sbjct 721 GADGTAPTSGGDGGNGGNGASPTVAGGNGGDGGKGGSGGNVGNGGNGGAGGNGAAGQAGT 780
Query 781 PGPTSGDSGTSGTDGGAGGNGGAGGAGGTLAGHGGNGGKGGNGGQGGIGGAGERGADGAG 840
PGPTSGDSGTSGTDGGAGGNGGAGGAGGTLAGHGGNGGKGGNGGQGGIGGAGERGADGAG
Sbjct 781 PGPTSGDSGTSGTDGGAGGNGGAGGAGGTLAGHGGNGGKGGNGGQGGIGGAGERGADGAG 840
Query 841 PNANGANGENGGSGGNGGDGGAGGNGGAGGKAQAAGYTDGATGTGGDGGNGGDGGKAGDG 900
PNANGANGENGGSGGNGGDGGAGGNGGAGGKAQAAGYTDGATGTGGDGGNGGDGGKAGDG
Sbjct 841 PNANGANGENGGSGGNGGDGGAGGNGGAGGKAQAAGYTDGATGTGGDGGNGGDGGKAGDG 900
Query 901 GAGENGLNSGAMLPGGGTVGNPGTGGNGGNGGNAGVGGTGGKAGTGSLTGLDGTDGITPN 960
GAGENGLNSGAMLPGGGTVGNPGTGGNGGNGGNAGVGGTGGKAGTGSLTGLDGTDGITPN
Sbjct 901 GAGENGLNSGAMLPGGGTVGNPGTGGNGGNGGNAGVGGTGGKAGTGSLTGLDGTDGITPN 960
Query 961 GGNGGNGGNGGKGGTAGNGSGAAGGNGGNGGSGLNGGDAGNGGNGGGALNQAGFFGTGGK 1020
GGNGGNGGNGGKGGTAGNGSGAAGGNGGNGGSGLNGGDAGNGGNGGGALNQAGFFGTGGK
Sbjct 961 GGNGGNGGNGGKGGTAGNGSGAAGGNGGNGGSGLNGGDAGNGGNGGGALNQAGFFGTGGK 1020
Query 1021 GGNGGNGGAGMINGGLGGFGGAGGGGAVDVAATTGGAGGNGGAGGFASTGLGGPGGAGGP 1080
GGNGGNGGAGMINGGLGGFGGAGGGGAVDVAATTGGAGGNGGAGGFASTGLGGPGGAGGP
Sbjct 1021 GGNGGNGGAGMINGGLGGFGGAGGGGAVDVAATTGGAGGNGGAGGFASTGLGGPGGAGGP 1080
Query 1081 GGAGDFASGVGGVGGAGGDGGAGGVGGFGGQGGIGGEGRTGGNGGSGGDGGGGISLGGNG 1140
GGAGDFASGVGGVGGAGGDGGAGGVGGFGGQGGIGGEGRTGGNGGSGGDGGGGISLGGNG
Sbjct 1081 GGAGDFASGVGGVGGAGGDGGAGGVGGFGGQGGIGGEGRTGGNGGSGGDGGGGISLGGNG 1140
Query 1141 GLGGNGGVSETGFGGAGGNGGYGGPGGPEGNGGLGGNGGAGGNGGVSTTGGDGGAGGKGG 1200
GLGGNGGVSETGFGGAGGNGGYGGPGGPEGNGGLGGNGGAGGNGGVSTTGGDGGAGGKGG
Sbjct 1141 GLGGNGGVSETGFGGAGGNGGYGGPGGPEGNGGLGGNGGAGGNGGVSTTGGDGGAGGKGG 1200
Query 1201 NGGDGGNVGLGGDAGSGGAGGNGGIGTDAGGAGGAGGAGGNGGSSKSTTTGNAGSGGAGG 1260
NGGDGGNVGLGGDAGSGGAGGNGGIGTDAGGAGGAGGAGGNGGSSKSTTTGNAGSGGAGG
Sbjct 1201 NGGDGGNVGLGGDAGSGGAGGNGGIGTDAGGAGGAGGAGGNGGSSKSTTTGNAGSGGAGG 1260
Query 1261 NGGTGLNGAGGAGGAGGNAGVAGVSFGNAVGGDGGNGGNGGHGGDGTTGGAGGKGGNGSS 1320
NGGTGLNGAGGAGGAGGNAGVAGVSFGNAVGGDGGNGGNGGHGGDGTTGGAGGKGGNGSS
Sbjct 1261 NGGTGLNGAGGAGGAGGNAGVAGVSFGNAVGGDGGNGGNGGHGGDGTTGGAGGKGGNGSS 1320
Query 1321 GAASGSGVVNVTAGHGGNGGNGGNGGNGSAGAGGQGGAGGSAGNGGHGGGATGGDGGNGG 1380
GAASGSGVVNVTAGHGGNGGNGGNGGNGSAGAGGQGGAGGSAGNGGHGGGATGGDGGNGG
Sbjct 1321 GAASGSGVVNVTAGHGGNGGNGGNGGNGSAGAGGQGGAGGSAGNGGHGGGATGGDGGNGG 1380
Query 1381 NGGNSGNSTGVAGLAGGAAGAGGNGGGTSSAAGHGGSGGSGGSGTTGGAGAAGGNGGAGA 1440
NGGNSGNSTGVAGLAGGAAGAGGNGGGTSSAAGHGGSGGSGGSGTTGGAGAAGGNGGAGA
Sbjct 1381 NGGNSGNSTGVAGLAGGAAGAGGNGGGTSSAAGHGGSGGSGGSGTTGGAGAAGGNGGAGA 1440
Query 1441 GGGSLSTGQSGGPRRQRWCRWQRRRWLGRQRRRRWCRWQRRCRRQRWRWRCRQRRLRRQW 1500
GGGSLSTGQSGGPRRQRWCRWQRRRWLGRQRRRRWCRWQRRCRRQRWRWRCRQRRLRRQW
Sbjct 1441 GGGSLSTGQSGGPRRQRWCRWQRRRWLGRQRRRRWCRWQRRCRRQRWRWRCRQRRLRRQW 1500
Query 1501 RQGRRRCRPWLHRRRGRQGRRWRQRRFQQRQRSRWQRR 1538
RQGRRRCRPWLHRRRGRQGRRWRQRRFQQRQRSRWQRR
Sbjct 1501 RQGRRRCRPWLHRRRGRQGRRWRQRRFQQRQRSRWQRR 1538
>gi|339296173|gb|AEJ48284.1| hypothetical protein CCDC5079_3095 [Mycobacterium tuberculosis
CCDC5079]
Length=1536
Score = 2526 bits (6548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1535/1536 (99%), Positives = 1535/1536 (99%), Gaps = 0/1536 (0%)
Query 3 MSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQE 62
MSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQE
Sbjct 1 MSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQE 60
Query 63 YQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPL 122
YQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPL
Sbjct 61 YQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPL 120
Query 123 IGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLFGNGGSGGSGGAGAA 182
IGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLFGNGGSGGSGGAGAA
Sbjct 121 IGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLFGNGGSGGSGGAGAA 180
Query 183 GGVGGSGGWLNGNGGAGGAGGTGANGGAGGNAWLFGAGGSGGAGTNGGVGGSGGFVYGNG 242
GGVGGSGGWLNGNGGAGGAGGTGANGGAGGNAWLFGAGGSGGAGTNGGVGGSGGFVYGNG
Sbjct 181 GGVGGSGGWLNGNGGAGGAGGTGANGGAGGNAWLFGAGGSGGAGTNGGVGGSGGFVYGNG 240
Query 243 GAGGIGGIGGIGGNGGDAGLFGNGGAGGAGAAGLPGAAGLNGGDGSDGGNGGTGGNGGRG 302
GAGGIGGIGGIGGNGGDAGLFGNGGAGGAGAAGLPGAAGLNGGDGSDGGNGGTGGNGGRG
Sbjct 241 GAGGIGGIGGIGGNGGDAGLFGNGGAGGAGAAGLPGAAGLNGGDGSDGGNGGTGGNGGRG 300
Query 303 GLLVGNGGAGGAGGVGGDGGKGGAGDPSFAVNNGAGGNGGHGGNPGVGGAGGAGGLLAGA 362
GLLVGNGGAGGAGGVGGDGGKGGAGDPSFAVNNGAGGNGGHGGNPGVGGAGGAGGLLAGA
Sbjct 301 GLLVGNGGAGGAGGVGGDGGKGGAGDPSFAVNNGAGGNGGHGGNPGVGGAGGAGGLLAGA 360
Query 363 HGAAGATPTSGGNGGDGGIGATANSPLQAGGAGGNGGHGGLVGNGGTGGAGGAGHAGSTG 422
HGAAGATPTSGGNGGDGGIGATANSPLQAGGAGGNGGHGGLVGNGGTGGAGGAGHAGSTG
Sbjct 361 HGAAGATPTSGGNGGDGGIGATANSPLQAGGAGGNGGHGGLVGNGGTGGAGGAGHAGSTG 420
Query 423 ATGTALQPTGGNGTNGGAGGHGGNGGNGGAQHGDGGVGGKGGAGGSGGAGGNGFDAATLG 482
ATGTALQPTGGNGTNGGAGGHGGNGGNGGAQHGDGGVGGKGGAGGSGGAGGNGFDAATLG
Sbjct 421 ATGTALQPTGGNGTNGGAGGHGGNGGNGGAQHGDGGVGGKGGAGGSGGAGGNGFDAATLG 480
Query 483 SPGADGGMGGNGGKGGDGGKAGDGGAGAAGDVTLAVNQGAGGDGGNGGEVGVGGKGGAGG 542
SPGADGGMGGNGGKGGDGGKAGDGGAGAAGDVTLAVNQGAGGDGGNGGEVGVGGKGGAGG
Sbjct 481 SPGADGGMGGNGGKGGDGGKAGDGGAGAAGDVTLAVNQGAGGDGGNGGEVGVGGKGGAGG 540
Query 543 VSANPALNGSAGANGTAPTSGGNGGNGGAGATPTVAGENGGAGGNGGHGGSVGNGGAGGA 602
VSANPALNGSAGANGTAPTSGGNGGNGGAGATPTVAGENGGAGGNGGHGGSVGNGGAGGA
Sbjct 541 VSANPALNGSAGANGTAPTSGGNGGNGGAGATPTVAGENGGAGGNGGHGGSVGNGGAGGA 600
Query 603 GGNGVAGTGLALNGGNGGNGGIGGNGGSAAGTGGDGGKGGNGGAGANGQDFSASANGANG 662
GGNGVAGTGLALNGGNGGNGGIGGNGGSAAGTGGDGGKGGNGGAGANGQDFSASANGANG
Sbjct 601 GGNGVAGTGLALNGGNGGNGGIGGNGGSAAGTGGDGGKGGNGGAGANGQDFSASANGANG 660
Query 663 GQGGNGGNGGIGGKGGDAFATFAKAGNGGAGGNGGNVGVAGQGGAGGKGAIPAMKGATGA 722
GQGGNGGNGGIGGKGGDAFATFAKAGNGGAGGNGGNVGVAGQGGAGGKGAIPAMKGATGA
Sbjct 661 GQGGNGGNGGIGGKGGDAFATFAKAGNGGAGGNGGNVGVAGQGGAGGKGAIPAMKGATGA 720
Query 723 DGTAPTSGGDGGNGGNGASPTVAGGNGGDGGKGGSGGNVGNGGNGGAGGNGAAGQAGTPG 782
DGTAPTSGGDGGNGGNGASPTVAGGNGGDGGKGGSGGNVGNGGNGGAGGNGAAGQAGTPG
Sbjct 721 DGTAPTSGGDGGNGGNGASPTVAGGNGGDGGKGGSGGNVGNGGNGGAGGNGAAGQAGTPG 780
Query 783 PTSGDSGTSGTDGGAGGNGGAGGAGGTLAGHGGNGGKGGNGGQGGIGGAGERGADGAGPN 842
PTSGDSGTSGTDGGAGGNGGAGGAGGTLAGHGGNGGKGGNGGQGGIGGAGERGADGAGPN
Sbjct 781 PTSGDSGTSGTDGGAGGNGGAGGAGGTLAGHGGNGGKGGNGGQGGIGGAGERGADGAGPN 840
Query 843 ANGANGENGGSGGNGGDGGAGGNGGAGGKAQAAGYTDGATGTGGDGGNGGDGGKAGDGGA 902
ANGANGENGGSGGNGGDGGAGGNGGAGGKAQAAGYTDGATGTGGDGGNGGDGGKAGDGGA
Sbjct 841 ANGANGENGGSGGNGGDGGAGGNGGAGGKAQAAGYTDGATGTGGDGGNGGDGGKAGDGGA 900
Query 903 GENGLNSGAMLPGGGTVGNPGTGGNGGNGGNAGVGGTGGKAGTGSLTGLDGTDGITPNGG 962
GENGLNSGAMLPGGGTVGNPGTGGNGGNGGNAGVGGTGGKAGTGSLTGLDGTDGITPNGG
Sbjct 901 GENGLNSGAMLPGGGTVGNPGTGGNGGNGGNAGVGGTGGKAGTGSLTGLDGTDGITPNGG 960
Query 963 NGGNGGNGGKGGTAGNGSGAAGGNGGNGGSGLNGGDAGNGGNGGGALNQAGFFGTGGKGG 1022
NGGNGGNGGKGGTAGNGSGAAGGNGGNGGSGLNGGDAGNGGNGGGALNQAGFFGTGGKGG
Sbjct 961 NGGNGGNGGKGGTAGNGSGAAGGNGGNGGSGLNGGDAGNGGNGGGALNQAGFFGTGGKGG 1020
Query 1023 NGGNGGAGMINGGLGGFGGAGGGGAVDVAATTGGAGGNGGAGGFASTGLGGPGGAGGPGG 1082
NGGNGGAGMINGGLGGFGGAGGGGAVDVAATTGGAGGNGGAGGFASTGLGGPGGAGGPGG
Sbjct 1021 NGGNGGAGMINGGLGGFGGAGGGGAVDVAATTGGAGGNGGAGGFASTGLGGPGGAGGPGG 1080
Query 1083 AGDFASGVGGVGGAGGDGGAGGVGGFGGQGGIGGEGRTGGNGGSGGDGGGGISLGGNGGL 1142
AGDFASGVGGVGGAGGDGGAGGVGGFGGQGGIGGEGRTGGNGGSGGDGGGGISLGGNGGL
Sbjct 1081 AGDFASGVGGVGGAGGDGGAGGVGGFGGQGGIGGEGRTGGNGGSGGDGGGGISLGGNGGL 1140
Query 1143 GGNGGVSETGFGGAGGNGGYGGPGGPEGNGGLGGNGGAGGNGGVSTTGGDGGAGGKGGNG 1202
GGNGGVSETGFGGAGGNGGYGGPGGPEGNGGLGGNGGAGGNGGVSTTGGDGGAGGKGGNG
Sbjct 1141 GGNGGVSETGFGGAGGNGGYGGPGGPEGNGGLGGNGGAGGNGGVSTTGGDGGAGGKGGNG 1200
Query 1203 GDGGNVGLGGDAGSGGAGGNGGIGTDAGGAGGAGGAGGNGGSSKSTTTGNAGSGGAGGNG 1262
GDGGNVGLGGDAGSGGAGGNGGIGTDAGGAGGAGGAGGNGGSSKSTTTGNAGSGGAGGNG
Sbjct 1201 GDGGNVGLGGDAGSGGAGGNGGIGTDAGGAGGAGGAGGNGGSSKSTTTGNAGSGGAGGNG 1260
Query 1263 GTGLNGAGGAGGAGGNAGVAGVSFGNAVGGDGGNGGNGGHGGDGTTGGAGGKGGNGSSGA 1322
GTGLNGAGGAGGAGGNAGVAGVSFGNAVGGDGGNGGNGGHGGDGTTGGAGGKGGNGSSGA
Sbjct 1261 GTGLNGAGGAGGAGGNAGVAGVSFGNAVGGDGGNGGNGGHGGDGTTGGAGGKGGNGSSGA 1320
Query 1323 ASGSGVVNVTAGHGGNGGNGGNGGNGSAGAGGQGGAGGSAGNGGHGGGATGGDGGNGGNG 1382
ASGSGVVNVTAGHGGNGGNGGNGGNGSAGAGGQGGAGGSAGNGGHGGGATGGDGGNGGNG
Sbjct 1321 ASGSGVVNVTAGHGGNGGNGGNGGNGSAGAGGQGGAGGSAGNGGHGGGATGGDGGNGGNG 1380
Query 1383 GNSGNSTGVAGLAGGAAGAGGNGGGTSSAAGHGGSGGSGGSGTTGGAGAAGGNGGAGAGG 1442
GNSGNSTGVAGLAGGAAGAGGNGGGTSSAAGHGGSGGSGGSGTTGGAGAAGGNGGAGAGG
Sbjct 1381 GNSGNSTGVAGLAGGAAGAGGNGGGTSSAAGHGGSGGSGGSGTTGGAGAAGGNGGAGAGG 1440
Query 1443 GSLSTGQSGGPRRQRWCRWQRRRWLGRQRRRRWCRWQRRCRRQRWRWRCRQRRLRRQWRQ 1502
GSLSTGQSGG RRQRWCRWQRRRWLGRQRRRRWCRWQRRCRRQRWRWRCRQRRLRRQWRQ
Sbjct 1441 GSLSTGQSGGHRRQRWCRWQRRRWLGRQRRRRWCRWQRRCRRQRWRWRCRQRRLRRQWRQ 1500
Query 1503 GRRRCRPWLHRRRGRQGRRWRQRRFQQRQRSRWQRR 1538
GRRRCRPWLHRRRGRQGRRWRQRRFQQRQRSRWQRR
Sbjct 1501 GRRRCRPWLHRRRGRQGRRWRQRRFQQRQRSRWQRR 1536
>gi|339633355|ref|YP_004724997.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339332711|emb|CCC28429.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1916
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 168/168 (100%), Positives = 168/168 (100%), Gaps = 0/168 (0%)
Query 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA
Sbjct 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR
Sbjct 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
Query 121 PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF
Sbjct 121 PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
>gi|148824551|ref|YP_001289305.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148723078|gb|ABR07703.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=1570
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 168/168 (100%), Positives = 168/168 (100%), Gaps = 0/168 (0%)
Query 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA
Sbjct 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR
Sbjct 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
Query 121 PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF
Sbjct 121 PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
>gi|15842940|ref|NP_337977.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13883276|gb|AAK47791.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1507
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 168/168 (100%), Positives = 168/168 (100%), Gaps = 0/168 (0%)
Query 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA
Sbjct 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR
Sbjct 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
Query 121 PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF
Sbjct 121 PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
>gi|344221186|gb|AEN01817.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1508
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 168/168 (100%), Positives = 168/168 (100%), Gaps = 0/168 (0%)
Query 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA
Sbjct 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR
Sbjct 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
Query 121 PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF
Sbjct 121 PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 53/53 (100%), Positives = 53/53 (100%), Gaps = 0/53 (0%)
Query 904 ENGLNSGAMLPGGGTVGNPGTGGNGGNGGNAGVGGTGGKAGTGSLTGLDGTDG 956
ENGLNSGAMLPGGGTVGNPGTGGNGGNGGNAGVGGTGGKAGTGSLTGLDGTDG
Sbjct 868 ENGLNSGAMLPGGGTVGNPGTGGNGGNGGNAGVGGTGGKAGTGSLTGLDGTDG 920
>gi|253800390|ref|YP_003033391.1| hypothetical protein TBMG_04106 [Mycobacterium tuberculosis KZN
1435]
gi|253321893|gb|ACT26496.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
gi|328460123|gb|AEB05546.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=1508
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 168/168 (100%), Positives = 168/168 (100%), Gaps = 0/168 (0%)
Query 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA
Sbjct 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR
Sbjct 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
Query 121 PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF
Sbjct 121 PLIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 53/53 (100%), Positives = 53/53 (100%), Gaps = 0/53 (0%)
Query 904 ENGLNSGAMLPGGGTVGNPGTGGNGGNGGNAGVGGTGGKAGTGSLTGLDGTDG 956
ENGLNSGAMLPGGGTVGNPGTGGNGGNGGNAGVGGTGGKAGTGSLTGLDGTDG
Sbjct 868 ENGLNSGAMLPGGGTVGNPGTGGNGGNGGNAGVGGTGGKAGTGSLTGLDGTDG 920
>gi|339299780|gb|AEJ51890.1| hypothetical protein CCDC5180_3053 [Mycobacterium tuberculosis
CCDC5180]
Length=1562
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%)
Query 3 MSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQE 62
MSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQE
Sbjct 1 MSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQE 60
Query 63 YQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPL 122
YQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPL
Sbjct 61 YQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPL 120
Query 123 IGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
IGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF
Sbjct 121 IGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 166
>gi|340628328|ref|YP_004746780.1| pe_pgrs50 protein [Mycobacterium canettii CIPT 140010059]
gi|340006518|emb|CCC45702.1| pe_pgrs50 protein [Mycobacterium canettii CIPT 140010059]
Length=2008
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/131 (100%), Positives = 131/131 (100%), Gaps = 0/131 (0%)
Query 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA
Sbjct 1 MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR
Sbjct 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
Query 121 PLIGDGVHGAP 131
PLIGDGVHGAP
Sbjct 121 PLIGDGVHGAP 131
>gi|254552456|ref|ZP_05142903.1| hypothetical protein Mtube_18730 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=436
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%)
Query 3 MSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQE 62
MSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQE
Sbjct 1 MSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQE 60
Query 63 YQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPL 122
YQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPL
Sbjct 61 YQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPL 120
Query 123 IGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 168
IGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF
Sbjct 121 IGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGAAGLF 166
>gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
Length=2118
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/134 (66%), Positives = 102/134 (77%), Gaps = 6/134 (4%)
Query 3 MSLM-VAPELVAA-AAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MSL+ V+PELV A AA+DL IG ++ AANAAAAGPTT VL+AA DEVS AIA LFGTHA
Sbjct 1 MSLVTVSPELV-AGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHA 59
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQAL---EQQVLGAINAPTQLW 117
EYQ+LSAR+A FHEQFV++LT+ Y + EA NAS + AL EQ L AINAPTQ W
Sbjct 60 AEYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSW 119
Query 118 LGRPLIGDGVHGAP 131
LGRPLIG+GV P
Sbjct 120 LGRPLIGNGVDATP 133
>gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=1330
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/123 (63%), Positives = 96/123 (79%), Gaps = 1/123 (0%)
Query 2 VMSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
+MSL +V PE VAAAA+D+ IG +I AN+AAAG TT VLAA DEVSAAIA LFG+HA
Sbjct 1 MMSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHA 60
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
+EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGR
Sbjct 61 REYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGR 120
Query 121 PLI 123
PLI
Sbjct 121 PLI 123
>gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1399
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/122 (64%), Positives = 95/122 (78%), Gaps = 1/122 (0%)
Query 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MSL +VAPE VAAAA D+ IG +I AN+AAAG TT VLAA DEVSAAIA LFG+HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 122 LI 123
LI
Sbjct 121 LI 122
>gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1408
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/122 (64%), Positives = 95/122 (78%), Gaps = 1/122 (0%)
Query 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MSL +VAPE VAAAA D+ IG +I AN+AAAG TT VLAA DEVSAAIA LFG+HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 122 LI 123
LI
Sbjct 121 LI 122
>gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31618236|emb|CAD96154.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=795
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/143 (67%), Positives = 113/143 (80%), Gaps = 1/143 (0%)
Query 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MSL +VAPE VAAAA D+ IG +I AN+AAAG TT VLAA DEVSAAIA LFG+HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 122 LIGDGVHGAPGTGQPGGAGGLLW 144
LIGDG GAPGTGQ GGAGG+LW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1389
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/143 (67%), Positives = 113/143 (80%), Gaps = 1/143 (0%)
Query 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MSL +VAPE VAAAA D+ IG +I AN+AAAG TT VLAA DEVSAAIA LFG+HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 122 LIGDGVHGAPGTGQPGGAGGLLW 144
LIGDG GAPGTGQ GGAGG+LW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224772970|dbj|BAH25776.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601401|emb|CCC64074.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=740
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/143 (67%), Positives = 113/143 (80%), Gaps = 1/143 (0%)
Query 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MSL +VAPE VAAAA D+ IG +I AN+AAAG TT VLAA DEVSAAIA LFG+HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 122 LIGDGVHGAPGTGQPGGAGGLLW 144
LIGDG GAPGTGQ GGAGG+LW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=1330
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/123 (62%), Positives = 96/123 (79%), Gaps = 1/123 (0%)
Query 2 VMSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
+MSL +V PE VAAAA+D+ IG +I AN+AAAG TT VLAA D+VSAAIA LFG+HA
Sbjct 1 MMSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHA 60
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
+EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGR
Sbjct 61 REYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGR 120
Query 121 PLI 123
PLI
Sbjct 121 PLI 123
>gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330875|emb|CCC26546.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=805
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/143 (66%), Positives = 113/143 (80%), Gaps = 1/143 (0%)
Query 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MSL +V PE VAAAA+D+ IG +I AN+AAAG TT VLAA DEVSAAIA LFG+HA+
Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 122 LIGDGVHGAPGTGQPGGAGGLLW 144
LIGDG GAPGTGQ GGAGG+LW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121493029|emb|CAL71500.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=740
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/143 (67%), Positives = 113/143 (80%), Gaps = 1/143 (0%)
Query 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MSL +VAPE VAAAA D+ IG +I AN+AAAG TT VLAA DEVSAAIA LFG+HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 122 LIGDGVHGAPGTGQPGGAGGLLW 144
LIGDG GAPGTGQ GGAGG+LW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [Mycobacterium tuberculosis
CCDC5180]
Length=742
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/144 (66%), Positives = 114/144 (80%), Gaps = 1/144 (0%)
Query 2 VMSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
+MSL +V PE VAAAA+D+ IG +I AN+AAAG TT VLAA DEVSAAIA LFG+HA
Sbjct 1 MMSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHA 60
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
+EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGR
Sbjct 61 REYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGR 120
Query 121 PLIGDGVHGAPGTGQPGGAGGLLW 144
PLIGDG GAPGTGQ GGAGG+LW
Sbjct 121 PLIGDGAAGAPGTGQAGGAGGILW 144
>gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1006
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/143 (67%), Positives = 113/143 (80%), Gaps = 1/143 (0%)
Query 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MSL +V PELVAAAA+D+ IG AAN+ AAG TT VLAA DEVSAAIA LFG+HA+
Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S +VA FH++FV++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGRP
Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 122 LIGDGVHGAPGTGQPGGAGGLLW 144
LIGDG GAPGTGQ GGAGG+LW
Sbjct 121 LIGDGAAGAPGTGQAGGAGGILW 143
>gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1386
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/147 (64%), Positives = 110/147 (75%), Gaps = 1/147 (0%)
Query 3 MSLM-VAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MS + VAPE+VA AA+DL +G ISAAN AAAG TT +LAA DEVSA IAALFGTHA
Sbjct 1 MSFVGVAPEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHAL 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S +++ FHEQFV++LT AY+ AE N PLQ +EQ +L +NAPTQ GRP
Sbjct 61 EYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGRP 120
Query 122 LIGDGVHGAPGTGQPGGAGGLLWGNGG 148
LIG+G GA GTGQ G AGG+LWGNGG
Sbjct 121 LIGNGADGAAGTGQAGAAGGILWGNGG 147
>gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis
(strain H37RV)
gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=1329
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/122 (66%), Positives = 96/122 (79%), Gaps = 1/122 (0%)
Query 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MSL +VAPE VAAAA D+ IG +I AANAAAAG TT VLAA DEVSAAIA LFG+HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 122 LI 123
LI
Sbjct 121 LI 122
>gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1408
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/123 (66%), Positives = 97/123 (79%), Gaps = 1/123 (0%)
Query 2 VMSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
+MSL +VAPE VAAAA D+ IG +I AANAAAAG TT VLAA DEVSAAIA LFG+HA
Sbjct 1 MMSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHA 60
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
+EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGR
Sbjct 61 REYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGR 120
Query 121 PLI 123
PLI
Sbjct 121 PLI 123
>gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1660
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/128 (63%), Positives = 95/128 (75%), Gaps = 5/128 (3%)
Query 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MS ++A PE++A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQALSA+ A FH+QFV +LTAA Y E ANA+ ++A VLGA+NAPTQ LGRP
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRA----VLGAVNAPTQTLLGRP 116
Query 122 LIGDGVHG 129
LIGDG HG
Sbjct 117 LIGDGAHG 124
>gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1407
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/122 (66%), Positives = 96/122 (79%), Gaps = 1/122 (0%)
Query 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MSL +VAPE VAAAA D+ IG +I AANAAAAG TT VLAA DEVSAAIA LFG+HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 122 LI 123
LI
Sbjct 121 LI 122
>gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1398
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/122 (66%), Positives = 96/122 (79%), Gaps = 1/122 (0%)
Query 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MSL +VAPE VAAAA D+ IG +I AANAAAAG TT VLAA DEVSAAIA LFG+HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 122 LI 123
LI
Sbjct 121 LI 122
>gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN
1435]
gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN
4207]
Length=1408
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/123 (65%), Positives = 97/123 (79%), Gaps = 1/123 (0%)
Query 2 VMSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
+MSL +V PE VAAAA+D+ IG +I AANAAAAG TT VLAA DEVSAAIA LFG+HA
Sbjct 1 MMSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHA 60
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
+EYQA+S +VA FH++F ++L+AA +Y +AEA NA+PL LE VL A+NAPTQ LGR
Sbjct 61 REYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGR 120
Query 121 PLI 123
PLI
Sbjct 121 PLI 123
>gi|183985262|ref|YP_001853553.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178588|gb|ACC43698.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=2432
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 90/126 (72%), Gaps = 1/126 (0%)
Query 3 MSLM-VAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MS + VAP L+ AAA DL G+G + AN AAAG T VL AAGDEVSAAIA LFG +
Sbjct 1 MSFVSVAPSLLDAAARDLAGLGAGLREANLAAAGATMGVLPAAGDEVSAAIAELFGGFGR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+ AR+A H+ FVR+LTA GSAY AEA N PLQ LEQQ LG +NAP+ GRP
Sbjct 61 EYQAVGARMALLHDDFVRALTAGGSAYGQAEALNMWPLQELEQQALGVVNAPSMALFGRP 120
Query 122 LIGDGV 127
LIG+GV
Sbjct 121 LIGNGV 126
>gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN
4207]
gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1303
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/130 (57%), Positives = 94/130 (73%), Gaps = 8/130 (6%)
Query 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MS ++A PE++ AA DL IG I+AAN AAA +VL A+ DEVS A+AALFGTHAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQ +SA+VATFH++FV++L+A S+Y AEA N +EQ +L A+NAPTQ GRP
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113
Query 122 LIGDGVHGAP 131
LIG+G G+P
Sbjct 114 LIGNGADGSP 123
>gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=998
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/130 (57%), Positives = 94/130 (73%), Gaps = 8/130 (6%)
Query 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MS ++A PE++ AA DL IG I+AAN AAA +VL A+ DEVS A+AALFGTHAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQ +SA+VATFH++FV++L+A S+Y AEA N +EQ +L A+NAPTQ GRP
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113
Query 122 LIGDGVHGAP 131
LIG+G G+P
Sbjct 114 LIGNGADGSP 123
>gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=1657
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/125 (63%), Positives = 92/125 (74%), Gaps = 5/125 (4%)
Query 6 MVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQEYQ 64
M+A PE++A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HAQEYQ
Sbjct 1 MIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 60
Query 65 ALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPLIG 124
ALSA+ A FH+QFV +LTAA Y E ANA+ ++ VLGA+NAPTQ LGRPLIG
Sbjct 61 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRPLIG 116
Query 125 DGVHG 129
DG HG
Sbjct 117 DGAHG 121
>gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1483
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/125 (62%), Positives = 93/125 (75%), Gaps = 7/125 (5%)
Query 3 MSLM-VAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MS + VAPE+VAAA DL GIG +ISAANAAA TT V+ AA DEVSAAIAALFG+HA+
Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+SA+ A FHE+ V++L + SAY E ANA +Q +L A+N PTQ WLGRP
Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANA------QQNLLNAVNGPTQAWLGRP 114
Query 122 LIGDG 126
LIG+G
Sbjct 115 LIGNG 119
>gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176632|gb|ACC41742.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=965
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/122 (60%), Positives = 89/122 (73%), Gaps = 4/122 (3%)
Query 5 LMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQEYQ 64
++VAPE+V AAA+DL IG AI+ AN A A PT ++LAA DEVS AIA+LF HA +YQ
Sbjct 4 VLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHALDYQ 63
Query 65 ALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPLIG 124
L AR+ FH+QFV +LTA G Y++AEAA A+PLQ L L +NAPTQ LGRPLIG
Sbjct 64 NLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDL----LNVVNAPTQALLGRPLIG 119
Query 125 DG 126
DG
Sbjct 120 DG 121
>gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174290|gb|ACC39400.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1425
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/163 (62%), Positives = 116/163 (72%), Gaps = 7/163 (4%)
Query 3 MSL-MVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MS +V P+++ AAAADL IG AI + AAA TT +L AA DEVSAAIA+LFGTHA
Sbjct 1 MSFTVVEPQMLTAAAADLAKIGAAIDTVSTAAAASTTNLLPAAADEVSAAIASLFGTHAL 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
YQA+ A+ ATFH+ FV++L+ A S YA E AN +EQ +LG INAPTQ GRP
Sbjct 61 AYQAIGAQAATFHDGFVQALSRAASRYAATEVAN------VEQNLLGLINAPTQALFGRP 114
Query 122 LIGDGVHGAPGTGQPGGAGGLLWGNGGNGGSGAAGQVGGPGGA 164
LIG+G GA GTGQ G AGGLLWGNGG GGSGA GQ GG GGA
Sbjct 115 LIGNGADGAAGTGQTGQAGGLLWGNGGAGGSGAPGQSGGTGGA 157
>gi|183984569|ref|YP_001852860.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183177895|gb|ACC43005.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1251
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/109 (65%), Positives = 87/109 (80%), Gaps = 0/109 (0%)
Query 18 DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQEYQALSARVATFHEQF 77
DLTGIG+A+ AA AAAA TT ++AAAGDEVS AIA LF HAQ YQALSA++A FH++F
Sbjct 18 DLTGIGEALRAATAAAAPSTTSLVAAAGDEVSTAIATLFSEHAQSYQALSAQMAAFHDRF 77
Query 78 VRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPLIGDG 126
+ +L A +YA+AEAAN +PLQ +EQ +LGA+NAPTQ+ GR LIGDG
Sbjct 78 MNALAGASGSYASAEAANVTPLQTIEQDLLGAVNAPTQVLFGRGLIGDG 126
>gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339331872|emb|CCC27575.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1657
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/129 (62%), Positives = 94/129 (73%), Gaps = 7/129 (5%)
Query 3 MSLMVA-PELVAAAAA-DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MS ++A PE++ A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HA
Sbjct 1 MSYVIATPEMM-ATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 59
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSA+ A FH+QFV +LTAA Y E ANA+ ++ VLGA+NAPTQ LGR
Sbjct 60 QEYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGR 115
Query 121 PLIGDGVHG 129
PLIGDG HG
Sbjct 116 PLIGDGAHG 124
>gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13882294|gb|AAK46868.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1665
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/129 (62%), Positives = 94/129 (73%), Gaps = 7/129 (5%)
Query 3 MSLMVA-PELVAAAAA-DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MS ++A PE++ A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HA
Sbjct 6 MSYVIATPEMM-ATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 64
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSA+ A FH+QFV +LTAA Y E ANA+ ++ VLGA+NAPTQ LGR
Sbjct 65 QEYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGR 120
Query 121 PLIGDGVHG 129
PLIGDG HG
Sbjct 121 PLIGDGAHG 129
>gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1644
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/129 (62%), Positives = 94/129 (73%), Gaps = 7/129 (5%)
Query 3 MSLMVA-PELVAAAAA-DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MS ++A PE++ A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HA
Sbjct 1 MSYVIATPEMM-ATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 59
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSA+ A FH+QFV +LTAA Y E ANA+ ++ VLGA+NAPTQ LGR
Sbjct 60 QEYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGR 115
Query 121 PLIGDGVHG 129
PLIGDG HG
Sbjct 116 PLIGDGAHG 124
>gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148662325|ref|YP_001283848.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7441223|pir||A70869 hypothetical glycine-rich protein Rv2490c - Mycobacterium tuberculosis
(strain H37RV)
gi|41353424|emb|CAE55496.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148506477|gb|ABQ74286.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1660
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/129 (62%), Positives = 94/129 (73%), Gaps = 7/129 (5%)
Query 3 MSLMVA-PELVAAAAA-DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MS ++A PE++ A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HA
Sbjct 1 MSYVIATPEMM-ATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 59
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSA+ A FH+QFV +LTAA Y E ANA+ ++ VLGA+NAPTQ LGR
Sbjct 60 QEYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGR 115
Query 121 PLIGDGVHG 129
PLIGDG HG
Sbjct 116 PLIGDGAHG 124
>gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=1323
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/129 (62%), Positives = 94/129 (73%), Gaps = 7/129 (5%)
Query 3 MSLMVA-PELVAAAAA-DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MS ++A PE++ A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HA
Sbjct 6 MSYVIATPEMM-ATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 64
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSA+ A FH+QFV +LTAA Y E ANA+ ++ VLGA+NAPTQ LGR
Sbjct 65 QEYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGR 120
Query 121 PLIGDGVHG 129
PLIGDG HG
Sbjct 121 PLIGDGAHG 129
>gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024 [Mycobacterium tuberculosis KZN
1435]
gi|253319935|gb|ACT24538.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|328458200|gb|AEB03623.1| hypothetical protein TBSG_01494 [Mycobacterium tuberculosis KZN
4207]
Length=1616
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/129 (62%), Positives = 94/129 (73%), Gaps = 7/129 (5%)
Query 3 MSLMVA-PELVAAAAA-DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
MS ++A PE++ A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HA
Sbjct 1 MSYVIATPEMM-ATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 59
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQALSA+ A FH+QFV +LTAA Y E ANA+ ++ VLGA+NAPTQ LGR
Sbjct 60 QEYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGR 115
Query 121 PLIGDGVHG 129
PLIGDG HG
Sbjct 116 PLIGDGAHG 124
>gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1451
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/130 (62%), Positives = 99/130 (77%), Gaps = 5/130 (3%)
Query 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MS ++A PEL+ +AAADL GI A+SAAN +AA PTTQ+LAA DEVSAAIAALFG HAQ
Sbjct 1 MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
YQAL + V FH++FV++L + ++YA AEAA+ +PLQAL V NAPTQ LGRP
Sbjct 61 AYQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQALYDLV----NAPTQALLGRP 116
Query 122 LIGDGVHGAP 131
LIG+G +GAP
Sbjct 117 LIGNGANGAP 126
>gi|183983743|ref|YP_001852034.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183177069|gb|ACC42179.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1814
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/143 (65%), Positives = 110/143 (77%), Gaps = 1/143 (0%)
Query 3 MSLM-VAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MS + VAPE VA AA+DL IG +I A NAAAAG TT VLAA DEVS AIAALFGTHAQ
Sbjct 1 MSFVSVAPEAVATAASDLARIGSSIDAVNAAAAGATTTVLAAGADEVSVAIAALFGTHAQ 60
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQA+S R++ +E+FV LTA ++YA +E+A+ S LQA+EQ VLG +NAP+Q W GRP
Sbjct 61 EYQAISTRISALNERFVALLTAGNNSYAASESASVSWLQAVEQDVLGLVNAPSQNWFGRP 120
Query 122 LIGDGVHGAPGTGQPGGAGGLLW 144
LIG+G G GTGQ GGAGG+LW
Sbjct 121 LIGNGADGVAGTGQAGGAGGILW 143
>gi|118619508|ref|YP_907840.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
gi|118571618|gb|ABL06369.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=1077
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/117 (63%), Positives = 83/117 (71%), Gaps = 0/117 (0%)
Query 11 LVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQEYQALSARV 70
L+ AAA DL G+G + AN AAAG T VL AAGDEVSAAIA LFG +EYQA+ ARV
Sbjct 10 LLEAAARDLAGLGAGLREANLAAAGATVGVLPAAGDEVSAAIAELFGGFGREYQAMGARV 69
Query 71 ATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPLIGDGV 127
A H+ FVR+LTA GSAY AEA N PLQ LEQQ LG +NAP+ GRP IG+GV
Sbjct 70 ALLHDDFVRALTAGGSAYGQAEALNMWPLQELEQQALGVVNAPSMALFGRPSIGNGV 126
>gi|183981221|ref|YP_001849512.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174547|gb|ACC39657.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1610
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/122 (57%), Positives = 90/122 (74%), Gaps = 4/122 (3%)
Query 5 LMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQEYQ 64
++ APE+++ AA+DL IG A+ AANAAA PT VLAAA DEVS AIA LFGT+A++YQ
Sbjct 4 VVAAPEILSVAASDLANIGSALQAANAAATTPTVSVLAAAADEVSEAIAELFGTYARDYQ 63
Query 65 ALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRPLIG 124
A+SA+ A FH +FV+++ A Y+ E ANASPLQ L LGA+NA T+ +GRPLIG
Sbjct 64 AISAQAARFHAEFVQAVNADAEWYSATEVANASPLQTL----LGAVNAQTEAMIGRPLIG 119
Query 125 DG 126
+G
Sbjct 120 NG 121
>gi|340626464|ref|YP_004744916.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004654|emb|CCC43798.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1408
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/87 (65%), Positives = 70/87 (81%), Gaps = 0/87 (0%)
Query 37 TTQVLAAAGDEVSAAIAALFGTHAQEYQALSARVATFHEQFVRSLTAAGSAYATAEAANA 96
TT VLAA DEVSAAIA LFG++A+EYQA+S +VA FH++FV++L+AA +Y +AEA NA
Sbjct 36 TTSVLAAGADEVSAAIALLFGSYAREYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNA 95
Query 97 SPLQALEQQVLGAINAPTQLWLGRPLI 123
+PL LE VL A+NAPTQ LGRPLI
Sbjct 96 APLATLEHNVLNALNAPTQALLGRPLI 122
>gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178656|gb|ACC43766.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=2001
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/131 (62%), Positives = 94/131 (72%), Gaps = 3/131 (2%)
Query 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAA-IAALFGTHA 60
MS ++A P+++AAAA+DLT IG + AAN+AA TT +LAAA DEVS IA+LF A
Sbjct 1 MSYVIATPDMLAAAASDLTNIGSTLGAANSAALARTTGLLAAAEDEVST-AIASLFSASA 59
Query 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGR 120
QEYQ +S R A H +FV SLT AG+AYA AEA NASPLQ LEQ VL AINAP+Q R
Sbjct 60 QEYQMVSTRAAHLHAEFVHSLTRAGAAYAAAEAVNASPLQTLEQNVLAAINAPSQALTAR 119
Query 121 PLIGDGVHGAP 131
PL GDG GAP
Sbjct 120 PLFGDGADGAP 130
>gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121492143|emb|CAL70608.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=1303
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/130 (57%), Positives = 95/130 (74%), Gaps = 8/130 (6%)
Query 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61
MS ++A PE++ AA DL IG I+AAN AAA +VL A+ DEVS A+AALFGTHAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121
EYQ +SA+VATFH++FV++L+AA S+Y AEA N +EQ +L A+NAPTQ GRP
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113
Query 122 LIGDGVHGAP 131
LIG+G G+P
Sbjct 114 LIGNGADGSP 123
Lambda K H
0.306 0.140 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 4002295071590
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40