BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3351c
Length=264
Score E
Sequences producing significant alignments: (Bits) Value
gi|289555631|ref|ZP_06444841.1| conserved hypothetical protein [... 538 4e-151
gi|15610487|ref|NP_217868.1| hypothetical protein Rv3351c [Mycob... 537 5e-151
gi|340628333|ref|YP_004746785.1| hypothetical protein MCAN_33771... 536 1e-150
gi|289576084|ref|ZP_06456311.1| oxidoreductase [Mycobacterium tu... 534 4e-150
gi|323717973|gb|EGB27160.1| hypothetical protein TMMG_04019 [Myc... 471 5e-131
gi|240169077|ref|ZP_04747736.1| oxidoreductase [Mycobacterium ka... 281 8e-74
gi|289576083|ref|ZP_06456310.1| conserved hypothetical protein [... 279 3e-73
gi|183981201|ref|YP_001849492.1| oxidoreductase [Mycobacterium m... 270 1e-70
gi|118617104|ref|YP_905436.1| oxidoreductase [Mycobacterium ulce... 262 4e-68
gi|296168838|ref|ZP_06850511.1| MitR protein [Mycobacterium para... 242 4e-62
gi|342861566|ref|ZP_08718213.1| oxidoreductase [Mycobacterium co... 221 1e-55
gi|183980145|ref|YP_001848436.1| oxidoreductase [Mycobacterium m... 214 1e-53
gi|296165021|ref|ZP_06847576.1| MitR protein [Mycobacterium para... 210 2e-52
gi|15607205|ref|NP_214577.1| oxidoreductase [Mycobacterium tuber... 208 7e-52
gi|254548993|ref|ZP_05139440.1| oxidoreductase [Mycobacterium tu... 208 8e-52
gi|306805844|ref|ZP_07442512.1| oxidoreductase [Mycobacterium tu... 207 9e-52
gi|289441429|ref|ZP_06431173.1| oxidoreductase [Mycobacterium tu... 207 1e-51
gi|289572640|ref|ZP_06452867.1| oxidoreductase [Mycobacterium tu... 207 1e-51
gi|340625096|ref|YP_004743548.1| putative oxidoreductase [Mycoba... 204 8e-51
gi|254818567|ref|ZP_05223568.1| FAD binding domain-containing pr... 201 1e-49
gi|289760164|ref|ZP_06519542.1| LOW QUALITY PROTEIN: oxidoreduct... 196 4e-48
gi|289747832|ref|ZP_06507210.1| oxidoreductase [Mycobacterium tu... 195 5e-48
gi|342860205|ref|ZP_08716857.1| FAD binding domain-containing pr... 195 5e-48
gi|41406179|ref|NP_959015.1| hypothetical protein MAP0081 [Mycob... 192 4e-47
gi|118462287|ref|YP_879387.1| FAD binding domain-containing prot... 192 4e-47
gi|336459403|gb|EGO38345.1| FAD/FMN-dependent dehydrogenase [Myc... 189 3e-46
gi|240172438|ref|ZP_04751097.1| putative oxidoreductase [Mycobac... 189 3e-46
gi|284032270|ref|YP_003382201.1| FAD linked oxidase domain-conta... 120 2e-25
gi|271962989|ref|YP_003337185.1| histidine kinase [Streptosporan... 65.9 6e-09
gi|340528688|gb|AEK43893.1| hypothetical protein RAM_27080 [Amyc... 62.8 5e-08
gi|300787189|ref|YP_003767480.1| hypothetical protein AMED_5316 ... 62.8 5e-08
gi|312200911|ref|YP_004020972.1| FAD linked oxidase domain prote... 62.4 6e-08
gi|302524094|ref|ZP_07276436.1| predicted protein [Streptomyces ... 62.0 1e-07
gi|290959341|ref|YP_003490523.1| berberine bridge protein [Strep... 58.5 1e-06
gi|311900287|dbj|BAJ32695.1| putative oxidoreductase [Kitasatosp... 58.2 1e-06
gi|345008298|ref|YP_004810652.1| FAD linked oxidase domain-conta... 57.4 2e-06
gi|229083655|ref|ZP_04215980.1| FAD linked oxidase domain protei... 57.0 3e-06
gi|154685342|ref|YP_001420503.1| YgaK [Bacillus amyloliquefacien... 56.2 4e-06
gi|290955746|ref|YP_003486928.1| berberine bridge protein [Strep... 55.1 1e-05
gi|337763465|emb|CCB72173.1| Lipoprotein [Streptomyces cattleya ... 55.1 1e-05
gi|297158512|gb|ADI08224.1| lipoprotein [Streptomyces bingchengg... 55.1 1e-05
gi|297193507|ref|ZP_06910905.1| lipoprotein [Streptomyces pristi... 55.1 1e-05
gi|150018781|ref|YP_001311035.1| FAD linked oxidase domain-conta... 54.3 2e-05
gi|228906137|ref|ZP_04070026.1| FAD linked oxidase domain protei... 53.9 2e-05
gi|293374554|ref|ZP_06620874.1| FAD binding domain protein [Turi... 53.9 3e-05
gi|126653149|ref|ZP_01725273.1| probable reticuline oxidase [Bac... 53.9 3e-05
gi|325843483|ref|ZP_08167993.1| FAD binding domain protein [Turi... 53.5 3e-05
gi|86738766|ref|YP_479166.1| twin-arginine translocation pathway... 53.5 3e-05
gi|302387530|ref|YP_003823352.1| FAD linked oxidase domain prote... 53.5 3e-05
gi|315647202|ref|ZP_07900315.1| FAD linked oxidase domain protei... 53.5 3e-05
>gi|289555631|ref|ZP_06444841.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|289440263|gb|EFD22756.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
Length=288
Score = 538 bits (1385), Expect = 4e-151, Method: Compositional matrix adjust.
Identities = 264/264 (100%), Positives = 264/264 (100%), Gaps = 0/264 (0%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV
Sbjct 25 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 84
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV
Sbjct 85 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 144
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP
Sbjct 145 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 204
Query 181 DRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVN 240
DRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVN
Sbjct 205 DRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVN 264
Query 241 VAVTQEQAGVMDLPALPVRRTPRR 264
VAVTQEQAGVMDLPALPVRRTPRR
Sbjct 265 VAVTQEQAGVMDLPALPVRRTPRR 288
>gi|15610487|ref|NP_217868.1| hypothetical protein Rv3351c [Mycobacterium tuberculosis H37Rv]
gi|15842947|ref|NP_337984.1| hypothetical protein MT3459 [Mycobacterium tuberculosis CDC1551]
gi|31794534|ref|NP_857027.1| hypothetical protein Mb3386c [Mycobacterium bovis AF2122/97]
56 more sequence titles
Length=264
Score = 537 bits (1384), Expect = 5e-151, Method: Compositional matrix adjust.
Identities = 263/264 (99%), Positives = 264/264 (100%), Gaps = 0/264 (0%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV
Sbjct 1 MLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV
Sbjct 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP
Sbjct 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
Query 181 DRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVN 240
DRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVN
Sbjct 181 DRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVN 240
Query 241 VAVTQEQAGVMDLPALPVRRTPRR 264
VAVTQEQAGVMDLPALPVRRTPRR
Sbjct 241 VAVTQEQAGVMDLPALPVRRTPRR 264
>gi|340628333|ref|YP_004746785.1| hypothetical protein MCAN_33771 [Mycobacterium canettii CIPT
140010059]
gi|340006523|emb|CCC45708.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=264
Score = 536 bits (1380), Expect = 1e-150, Method: Compositional matrix adjust.
Identities = 262/264 (99%), Positives = 264/264 (100%), Gaps = 0/264 (0%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LASCPARSGAAVADAIK+AVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV
Sbjct 1 MLASCPARSGAAVADAIKAAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV
Sbjct 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP
Sbjct 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
Query 181 DRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVN 240
DRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVN
Sbjct 181 DRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVN 240
Query 241 VAVTQEQAGVMDLPALPVRRTPRR 264
VAVTQEQAGVMDLPALPVRRTPRR
Sbjct 241 VAVTQEQAGVMDLPALPVRRTPRR 264
>gi|289576084|ref|ZP_06456311.1| oxidoreductase [Mycobacterium tuberculosis K85]
gi|339633359|ref|YP_004725001.1| hypothetical protein MAF_33660 [Mycobacterium africanum GM041182]
gi|289540515|gb|EFD45093.1| oxidoreductase [Mycobacterium tuberculosis K85]
gi|339332715|emb|CCC28435.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=264
Score = 534 bits (1376), Expect = 4e-150, Method: Compositional matrix adjust.
Identities = 262/264 (99%), Positives = 263/264 (99%), Gaps = 0/264 (0%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV
Sbjct 1 MLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV
Sbjct 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP
Sbjct 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
Query 181 DRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVN 240
DRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVN
Sbjct 181 DRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVN 240
Query 241 VAVTQEQAGVMDLPALPVRRTPRR 264
VAVTQEQAGVMDLPALP RRTPRR
Sbjct 241 VAVTQEQAGVMDLPALPGRRTPRR 264
>gi|323717973|gb|EGB27160.1| hypothetical protein TMMG_04019 [Mycobacterium tuberculosis CDC1551A]
Length=229
Score = 471 bits (1212), Expect = 5e-131, Method: Compositional matrix adjust.
Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)
Query 36 MDLVRYLAGGHTTYPPEGFVAGSDVIGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGG 95
MDLVRYLAGGHTTYPPEGFVAGSDVIGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGG
Sbjct 1 MDLVRYLAGGHTTYPPEGFVAGSDVIGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGG 60
Query 96 AVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLE 155
AVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLE
Sbjct 61 AVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLE 120
Query 156 ANAAASQYFGANLSRLTTVRRKYDPDRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIR 215
ANAAASQYFGANLSRLTTVRRKYDPDRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIR
Sbjct 121 ANAAASQYFGANLSRLTTVRRKYDPDRIMYSGLDFSTRQVAERLLPALGFRVRFGVLVIR 180
Query 216 CALCTDTVKRLGTLPNLTWSRLKVNVAVTQEQAGVMDLPALPVRRTPRR 264
CALCTDTVKRLGTLPNLTWSRLKVNVAVTQEQAGVMDLPALPVRRTPRR
Sbjct 181 CALCTDTVKRLGTLPNLTWSRLKVNVAVTQEQAGVMDLPALPVRRTPRR 229
>gi|240169077|ref|ZP_04747736.1| oxidoreductase [Mycobacterium kansasii ATCC 12478]
Length=477
Score = 281 bits (718), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/190 (72%), Positives = 155/190 (82%), Gaps = 0/190 (0%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
VLA+CPA SG AVA+AIKSAVGVQP+GVEHKTL MDLV YLAGG T P FVAGSDV
Sbjct 288 VLATCPAGSGPAVANAIKSAVGVQPTGVEHKTLSHMDLVMYLAGGSATSSPRSFVAGSDV 347
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
IGT N AAAQ+IVAA+G WPPA+GRAS ++D+L GAVGD+DP GSAFPW RQSAV QWYV
Sbjct 348 IGTMNSAAAQSIVAALGKWPPASGRASVIVDTLSGAVGDVDPSGSAFPWRRQSAVAQWYV 407
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
TP GQVA ANKW+ AH AVQ FSVG YVNYLE N A ++YFG NL+RLT +R++YDP
Sbjct 408 ETPGSGQVAAANKWIGAAHQAVQQFSVGAYVNYLEPNTAPARYFGPNLARLTAIRQRYDP 467
Query 181 DRIMYSGLDF 190
++MYSG+ F
Sbjct 468 GQLMYSGIVF 477
>gi|289576083|ref|ZP_06456310.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289540514|gb|EFD45092.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=137
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/137 (99%), Positives = 136/137 (99%), Gaps = 0/137 (0%)
Query 128 VATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDPDRIMYSG 187
+ATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDPDRIMYSG
Sbjct 1 MATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDPDRIMYSG 60
Query 188 LDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVNVAVTQEQ 247
LDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVNVAVTQEQ
Sbjct 61 LDFSTRQVAERLLPALGFRVRFGVLVIRCALCTDTVKRLGTLPNLTWSRLKVNVAVTQEQ 120
Query 248 AGVMDLPALPVRRTPRR 264
AGVMDLPALP RRTPRR
Sbjct 121 AGVMDLPALPGRRTPRR 137
>gi|183981201|ref|YP_001849492.1| oxidoreductase [Mycobacterium marinum M]
gi|183174527|gb|ACC39637.1| oxidoreductase [Mycobacterium marinum M]
Length=480
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/190 (72%), Positives = 158/190 (84%), Gaps = 0/190 (0%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
VLA+CPA +G VADAIKSAVG QP+G+E KT M+LV+YLAGG + P GFVAGSDV
Sbjct 291 VLATCPAGAGRGVADAIKSAVGAQPTGIETKTFNHMELVKYLAGGSSASSPRGFVAGSDV 350
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
IGT N AAAQAIVAA+G WPPA+GRASAL+D+L GAVGD+DP +AFPW RQSAVVQWYV
Sbjct 351 IGTVNSAAAQAIVAAVGKWPPASGRASALVDTLTGAVGDIDPTATAFPWRRQSAVVQWYV 410
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
TPS GQ A A KW++ AH AVQ FSVGGYVNYLEAN A S+YFG+NLSRLT +R++YDP
Sbjct 411 ETPSSGQTAAATKWINSAHQAVQQFSVGGYVNYLEANTAPSRYFGSNLSRLTQIRQRYDP 470
Query 181 DRIMYSGLDF 190
R+MYSGL+F
Sbjct 471 SRLMYSGLNF 480
>gi|118617104|ref|YP_905436.1| oxidoreductase [Mycobacterium ulcerans Agy99]
gi|118569214|gb|ABL03965.1| oxidoreductase [Mycobacterium ulcerans Agy99]
Length=480
Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 134/190 (71%), Positives = 156/190 (83%), Gaps = 0/190 (0%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
VLA+CPA +G VADAIKSAVG QP+G+E KT M+LV+YLAGG + P GFVAGSDV
Sbjct 291 VLATCPAGAGRGVADAIKSAVGAQPTGIETKTFNHMELVKYLAGGSSASSPRGFVAGSDV 350
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
IGT N AAAQAIVAA+G PPA+G ASAL+D+L GAVGD+DP +AFPW RQSAVVQWYV
Sbjct 351 IGTVNSAAAQAIVAAVGKSPPASGWASALVDTLTGAVGDIDPTATAFPWRRQSAVVQWYV 410
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
TPS GQ A A KW++ AH AVQ FSVGGYVNYLEAN A S+YFG+NLSRLT +R++YDP
Sbjct 411 ETPSSGQTAAATKWINSAHQAVQQFSVGGYVNYLEANTALSRYFGSNLSRLTQIRQRYDP 470
Query 181 DRIMYSGLDF 190
R+MYSGL+F
Sbjct 471 SRLMYSGLNF 480
>gi|296168838|ref|ZP_06850511.1| MitR protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896497|gb|EFG76146.1| MitR protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=488
Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 128/190 (68%), Positives = 149/190 (79%), Gaps = 1/190 (0%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
VLA+CPA SG+AVADAIKSAVGV PS V +KT+ R DLV +LAGG +T P FVAGSDV
Sbjct 300 VLATCPAGSGSAVADAIKSAVGVAPSSVSNKTMSRSDLVMFLAGGTSTPPARAFVAGSDV 359
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
IG + AAA AI AIG WP AG+AS L+D LGGAV D+ +AFPW Q+AV+QWYV
Sbjct 360 IGPVDSAAAHAIATAIGQWPSGAGQASVLVDPLGGAVADVAAGDTAFPWRNQAAVLQWYV 419
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
PS QV+ AN WLS AH AVQ FSVGGYVNYLEAN A ++YFG+NLSRLTTVR+KYDP
Sbjct 420 E-PSSSQVSAANTWLSSAHQAVQQFSVGGYVNYLEANGAPARYFGSNLSRLTTVRQKYDP 478
Query 181 DRIMYSGLDF 190
+R+M+SGLDF
Sbjct 479 NRVMFSGLDF 488
>gi|342861566|ref|ZP_08718213.1| oxidoreductase [Mycobacterium colombiense CECT 3035]
gi|342131055|gb|EGT84344.1| oxidoreductase [Mycobacterium colombiense CECT 3035]
Length=456
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/191 (64%), Positives = 140/191 (74%), Gaps = 2/191 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
VLA+ PA +G+AV DA+KSAVG+ PS V +KTL MDLV YLAGG T P GFVAGSDV
Sbjct 267 VLATAPAGTGSAVVDALKSAVGLAPSAVTNKTLSHMDLVTYLAGGSGTSPARGFVAGSDV 326
Query 61 IGTTNPAAAQAIVAAIGTWPPA-AGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWY 119
IG AAA AI A G WP + AG+AS LID LGGAV D+ +AFPW QSAVVQWY
Sbjct 327 IGPMTSAAAHAIATAAGQWPASGAGQASVLIDPLGGAVADVAAGDTAFPWRNQSAVVQWY 386
Query 120 VNTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYD 179
V P+ QV A W+ AH AVQ FSVGGYVNYLE N S+Y+G+NL RLTTVR+KYD
Sbjct 387 VE-PAANQVGAATTWVGSAHQAVQQFSVGGYVNYLEPNPTPSRYYGSNLPRLTTVRQKYD 445
Query 180 PDRIMYSGLDF 190
P+R+M+SGLDF
Sbjct 446 PNRMMFSGLDF 456
>gi|183980145|ref|YP_001848436.1| oxidoreductase [Mycobacterium marinum M]
gi|183173471|gb|ACC38581.1| oxidoreductase [Mycobacterium marinum M]
Length=479
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/190 (58%), Positives = 136/190 (72%), Gaps = 2/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CP SG +VA AI SAVGVQP G +H T +DLVRYLA G+ P G+V GSDV
Sbjct 292 ILATCPVGSGGSVASAITSAVGVQPIGTDHHTFNYLDLVRYLAVGNLNPAPLGYVGGSDV 351
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
+ T N AA+ I +AI +P AGRA A++ +L GA+ + P +AFPW RQSA+VQWYV
Sbjct 352 LPTINAGAAKGIASAIDAFPRGAGRALAIMHALDGALATVAPGATAFPWRRQSALVQWYV 411
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
TP G A A+ WL+ AH AVQ +S GGYVNYLEAN AS+YFG NLSRL+ VR+KYDP
Sbjct 412 ETP--GSPAAASGWLNTAHQAVQPYSAGGYVNYLEANQPASRYFGPNLSRLSAVRQKYDP 469
Query 181 DRIMYSGLDF 190
R+M+SGL+
Sbjct 470 GRVMFSGLNL 479
>gi|296165021|ref|ZP_06847576.1| MitR protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899669|gb|EFG79120.1| MitR protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=477
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/190 (56%), Positives = 133/190 (70%), Gaps = 3/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
++A+CP SG++V AI AVGVQP+G E+ T +DLV YLA G+ P G+V GSDV
Sbjct 291 IMATCPVGSGSSVGSAITKAVGVQPTGTENHTFNYLDLVNYLAVGNLNPSPLGYVGGSDV 350
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
+ N A AQ I A+ +P AGR A++ +L GA+ D+ P +AFPW RQ A+VQWYV
Sbjct 351 LPVVNAATAQGIAKAVDAFPRGAGRMLAIMHALDGALADVAPGATAFPWRRQYALVQWYV 410
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G VA A WL+ AH AVQ +SVGGYVNY+EAN AS+YF +NLSRLT VR+KYDP
Sbjct 411 ET---GDVAAATNWLNTAHQAVQPYSVGGYVNYIEANQPASRYFSSNLSRLTAVRQKYDP 467
Query 181 DRIMYSGLDF 190
RIM+SGL+F
Sbjct 468 SRIMFSGLNF 477
>gi|15607205|ref|NP_214577.1| oxidoreductase [Mycobacterium tuberculosis H37Rv]
gi|15839441|ref|NP_334478.1| mitR protein [Mycobacterium tuberculosis CDC1551]
gi|31791240|ref|NP_853733.1| oxidoreductase [Mycobacterium bovis AF2122/97]
49 more sequence titles
Length=479
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/190 (55%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG +VA AI SAVG QP+G E+ T +DLVRYLA G+ P G+V GSDV
Sbjct 292 ILATCPAGSGGSVAAAIVSAVGTQPTGTENHTFNYLDLVRYLAVGNLNPSPLGYVGGSDV 351
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T PA AQ I +A+ +P AGR A++ +L GA+ + P +AFPW RQSA+VQWYV
Sbjct 352 FTTITPATAQGIASAVDAFPRGAGRMLAIMHALDGALATVSPGATAFPWRRQSALVQWYV 411
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G + A WL+ AH AV+ +SVGGYVNYLE N ++YFG NLSRL+ VR+KYDP
Sbjct 412 ET--SGSPSEATSWLNTAHQAVRAYSVGGYVNYLEVNQPPARYFGPNLSRLSAVRQKYDP 469
Query 181 DRIMYSGLDF 190
R+M+SGL+F
Sbjct 470 SRVMFSGLNF 479
>gi|254548993|ref|ZP_05139440.1| oxidoreductase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=434
Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 104/190 (55%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG +VA AI SAVG QP+G E+ T +DLVRYLA G+ P G+V GSDV
Sbjct 247 ILATCPAGSGGSVAAAIVSAVGTQPTGTENHTFNYLDLVRYLAVGNLNPSPLGYVGGSDV 306
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T PA AQ I +A+ +P AGR A++ +L GA+ + P +AFPW RQSA+VQWYV
Sbjct 307 FTTITPATAQGIASAVDAFPRGAGRMLAIMHALDGALATVSPGATAFPWRRQSALVQWYV 366
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G + A WL+ AH AV+ +SVGGYVNYLE N ++YFG NLSRL+ VR+KYDP
Sbjct 367 ET--SGSPSEATSWLNTAHQAVRAYSVGGYVNYLEVNQPPARYFGPNLSRLSAVRQKYDP 424
Query 181 DRIMYSGLDF 190
R+M+SGL+F
Sbjct 425 SRVMFSGLNF 434
>gi|306805844|ref|ZP_07442512.1| oxidoreductase [Mycobacterium tuberculosis SUMu007]
gi|306970241|ref|ZP_07482902.1| oxidoreductase [Mycobacterium tuberculosis SUMu009]
gi|308347734|gb|EFP36585.1| oxidoreductase [Mycobacterium tuberculosis SUMu007]
gi|308352358|gb|EFP41209.1| oxidoreductase [Mycobacterium tuberculosis SUMu009]
Length=479
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/190 (55%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG +VA AI SAVG QP+G E+ T +DLVRYLA G+ P G+V GSDV
Sbjct 292 ILATCPAGSGGSVAAAIVSAVGTQPTGTENHTFNYLDLVRYLAVGNLNPSPLGYVGGSDV 351
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T PA AQ I +A+ +P AGR A++ +L GA+ + P +AFPW RQSA+VQWYV
Sbjct 352 FTTITPATAQGIASAVDAFPRGAGRMLAIMHALDGALATVSPGATAFPWRRQSALVQWYV 411
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G + A WL+ AH AV+ +SVGGYVNYLE N ++YFG NLSRL+ VR+KYDP
Sbjct 412 ET--SGSPSEATSWLNTAHQAVRAYSVGGYVNYLEVNQPPARYFGPNLSRLSAVRQKYDP 469
Query 181 DRIMYSGLDF 190
R+M+SGL+F
Sbjct 470 SRVMFSGLNF 479
>gi|289441429|ref|ZP_06431173.1| oxidoreductase [Mycobacterium tuberculosis T46]
gi|289567950|ref|ZP_06448177.1| oxidoreductase [Mycobacterium tuberculosis T17]
gi|289748527|ref|ZP_06507905.1| oxidoreductase [Mycobacterium tuberculosis T92]
gi|289756123|ref|ZP_06515501.1| oxidoreductase [Mycobacterium tuberculosis EAS054]
gi|289414348|gb|EFD11588.1| oxidoreductase [Mycobacterium tuberculosis T46]
gi|289541703|gb|EFD45352.1| oxidoreductase [Mycobacterium tuberculosis T17]
gi|289689114|gb|EFD56543.1| oxidoreductase [Mycobacterium tuberculosis T92]
gi|289696710|gb|EFD64139.1| oxidoreductase [Mycobacterium tuberculosis EAS054]
Length=479
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/190 (55%), Positives = 132/190 (70%), Gaps = 2/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG +VA AI SAVG QP+G E+ T +DLVRYLA G+ P G+V GSDV
Sbjct 292 ILATCPAGSGGSVAAAIVSAVGTQPTGTENHTFNYLDLVRYLAVGNLNPSPLGYVGGSDV 351
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T PA AQ I +A+ +P AGR A++ +L GA+ + P +AFPW RQSA+VQWYV
Sbjct 352 FTTITPATAQGIASAVDAFPRGAGRMLAIMHALDGALATVSPGATAFPWRRQSALVQWYV 411
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G A WL+ AH AV+ +SVGGYVNYLE N ++YFG NLSRL+ VR+KYDP
Sbjct 412 ET--SGSPPEATSWLNTAHQAVRAYSVGGYVNYLEVNQPPARYFGPNLSRLSAVRQKYDP 469
Query 181 DRIMYSGLDF 190
R+M+SGL+F
Sbjct 470 SRVMFSGLNF 479
>gi|289572640|ref|ZP_06452867.1| oxidoreductase [Mycobacterium tuberculosis K85]
gi|289537071|gb|EFD41649.1| oxidoreductase [Mycobacterium tuberculosis K85]
Length=442
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/190 (55%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG +VA AI SAVG QP+G E+ T +DLVRYLA G+ P G+V GSDV
Sbjct 255 ILATCPAGSGGSVAAAIVSAVGTQPTGTENHTFNYLDLVRYLAVGNLNPSPLGYVGGSDV 314
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T PA AQ I +A+ +P AGR A++ +L GA+ + P +AFPW RQSA+VQWYV
Sbjct 315 FTTITPATAQGIASAVDAFPRGAGRMLAIMHALDGALATVSPGATAFPWRRQSALVQWYV 374
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G + A WL+ AH AV+ +SVGGYVNYLE N ++YFG NLSRL+ VR+KYDP
Sbjct 375 ET--SGSPSEATSWLNTAHQAVRAYSVGGYVNYLEVNQPPARYFGPNLSRLSAVRQKYDP 432
Query 181 DRIMYSGLDF 190
R+M+SGL+F
Sbjct 433 SRVMFSGLNF 442
>gi|340625096|ref|YP_004743548.1| putative oxidoreductase [Mycobacterium canettii CIPT 140010059]
gi|340003286|emb|CCC42403.1| putative oxidoreductase [Mycobacterium canettii CIPT 140010059]
Length=479
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 104/190 (55%), Positives = 132/190 (70%), Gaps = 2/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG +VA AI SAVG QP+G E+ T +DLVRYLA G+ P G+V GSDV
Sbjct 292 ILATCPAGSGGSVAAAIVSAVGTQPTGTENHTFNYLDLVRYLAVGNLNPSPLGYVGGSDV 351
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
PAAAQ I +A+ +P AGR A++ +L GA+ + P +AFPW RQSA+VQWYV
Sbjct 352 FTAITPAAAQGIASAVDAFPRGAGRMLAIMHALDGALAAVAPGATAFPWRRQSALVQWYV 411
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G A WL+ AH AV+ +SVGGYVNYLE N ++YFG NLSRL+ VR+KYDP
Sbjct 412 ET--SGPPLEATSWLNTAHQAVRAYSVGGYVNYLEVNQPPARYFGPNLSRLSAVRQKYDP 469
Query 181 DRIMYSGLDF 190
R+M+SGL+F
Sbjct 470 SRVMFSGLNF 479
>gi|254818567|ref|ZP_05223568.1| FAD binding domain-containing protein [Mycobacterium intracellulare
ATCC 13950]
Length=477
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/190 (54%), Positives = 129/190 (68%), Gaps = 3/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
++A+ PA SG + A AI AVG+QPSG E+ T MDLV YLA G+ P G+V GSDV
Sbjct 291 IMATSPAGSGNSTAAAITQAVGMQPSGTENHTFNYMDLVNYLAVGNLNPSPLGYVGGSDV 350
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T N AQ I AA+ +P AGR A++ +L GA+ + P +AFPW RQSA+VQWYV
Sbjct 351 FATVNAGVAQGIAAAVNAFPRGAGRMLAIMHALDGALATVAPGATAFPWRRQSALVQWYV 410
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G A A WL AH AVQ +SVGGYVNY+EA + ++YFG NLSRL+ VR+KYDP
Sbjct 411 ET---GDPAAATNWLGTAHQAVQQYSVGGYVNYIEAGQSPARYFGPNLSRLSAVRQKYDP 467
Query 181 DRIMYSGLDF 190
R+M+SGL++
Sbjct 468 GRVMFSGLNY 477
>gi|289760164|ref|ZP_06519542.1| LOW QUALITY PROTEIN: oxidoreductase [Mycobacterium tuberculosis
T85]
gi|289715728|gb|EFD79740.1| LOW QUALITY PROTEIN: oxidoreductase [Mycobacterium tuberculosis
T85]
Length=480
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/183 (55%), Positives = 126/183 (69%), Gaps = 2/183 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG +VA AI SAVG QP+G E+ T +DLVRYLA G+ P G+V GSDV
Sbjct 292 ILATCPAGSGGSVAAAIVSAVGTQPTGTENHTFNYLDLVRYLAVGNLNPSPLGYVGGSDV 351
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T PA AQ I +A+ +P AGR A++ +L GA+ + P +AFPW RQSA+VQWYV
Sbjct 352 FTTITPATAQGIASAVDAFPRGAGRMLAIMHALDGALATVSPGATAFPWRRQSALVQWYV 411
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G + A WL+ AH AV+ +SVGGYVNYLE N ++YFG NLSRL+ VR+KYDP
Sbjct 412 ET--SGSPSEATSWLNTAHQAVRAYSVGGYVNYLEVNQPPARYFGPNLSRLSAVRQKYDP 469
Query 181 DRI 183
R+
Sbjct 470 SRV 472
>gi|289747832|ref|ZP_06507210.1| oxidoreductase [Mycobacterium tuberculosis 02_1987]
gi|289688360|gb|EFD55848.1| oxidoreductase [Mycobacterium tuberculosis 02_1987]
gi|326905823|gb|EGE52756.1| hypothetical protein TBPG_03789 [Mycobacterium tuberculosis W-148]
gi|339293135|gb|AEJ45246.1| oxidoreductase [Mycobacterium tuberculosis CCDC5079]
gi|339296784|gb|AEJ48894.1| oxidoreductase [Mycobacterium tuberculosis CCDC5180]
Length=486
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/183 (55%), Positives = 126/183 (69%), Gaps = 2/183 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG +VA AI SAVG QP+G E+ T +DLVRYLA G+ P G+V GSDV
Sbjct 292 ILATCPAGSGGSVAAAIVSAVGTQPTGTENHTFNYLDLVRYLAVGNLNPSPLGYVGGSDV 351
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T PA AQ I +A+ +P AGR A++ +L GA+ + P +AFPW RQSA+VQWYV
Sbjct 352 FTTITPATAQGIASAVDAFPRGAGRMLAIMHALDGALATVSPGATAFPWRRQSALVQWYV 411
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G + A WL+ AH AV+ +SVGGYVNYLE N ++YFG NLSRL+ VR+KYDP
Sbjct 412 ET--SGSPSEATSWLNTAHQAVRAYSVGGYVNYLEVNQPPARYFGPNLSRLSAVRQKYDP 469
Query 181 DRI 183
R+
Sbjct 470 SRV 472
>gi|342860205|ref|ZP_08716857.1| FAD binding domain-containing protein [Mycobacterium colombiense
CECT 3035]
gi|342132583|gb|EGT85812.1| FAD binding domain-containing protein [Mycobacterium colombiense
CECT 3035]
Length=477
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/190 (54%), Positives = 130/190 (69%), Gaps = 3/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG + A AI AVG+QPS E+ T MDLV YLA G+ P G+V GSDV
Sbjct 291 ILATCPAGSGNSAAAAITQAVGLQPSSTENHTFNYMDLVNYLAVGNLNPSPLGYVGGSDV 350
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T N AQ I AA+ +P AGR A++ ++ GA+ + P +AFPW RQSA+VQWYV
Sbjct 351 FATVNAGVAQGIAAAVNAFPRGAGRMLAIMHAMDGALATVAPGATAFPWRRQSALVQWYV 410
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G A A WL+ AH AVQ +SVGGYVNY+EA+ S+YFG NLSRL+ VR+KYDP
Sbjct 411 ET---GDPAAATSWLNTAHQAVQQYSVGGYVNYIEADQPPSRYFGPNLSRLSAVRQKYDP 467
Query 181 DRIMYSGLDF 190
R+M+SGL++
Sbjct 468 GRVMFSGLNY 477
>gi|41406179|ref|NP_959015.1| hypothetical protein MAP0081 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394527|gb|AAS02398.1| hypothetical protein MAP_0081 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=438
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/190 (57%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG + A AI AVG+QPSGVE T MDLV YLA G+ P G+V GSDV
Sbjct 251 ILATCPAGSGNSAAAAITQAVGIQPSGVETHTFNYMDLVNYLAVGNLNPQPLGYVGGSDV 310
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T N A AQ I AA+ +P AGR A++ +L GA+ + P +AFPW RQSA+VQWYV
Sbjct 311 FPTVNAAVAQGIAAAVNAFPRNAGRMLAIMHALDGALATVAPAATAFPWRRQSALVQWYV 370
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G A A WL+ AH AVQ +SVGGYVNYLEAN + ++YFG NLSRL+ VR+KYDP
Sbjct 371 ET--SGDPAAATNWLASAHQAVQQYSVGGYVNYLEANQSPARYFGPNLSRLSAVRQKYDP 428
Query 181 DRIMYSGLDF 190
R+M+SGL++
Sbjct 429 GRVMFSGLNY 438
>gi|118462287|ref|YP_879387.1| FAD binding domain-containing protein [Mycobacterium avium 104]
gi|254773134|ref|ZP_05214650.1| FAD binding domain-containing protein [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118163574|gb|ABK64471.1| FAD binding domain protein [Mycobacterium avium 104]
Length=478
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/190 (57%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG + A AI AVG+QPSGVE T MDLV YLA G+ P G+V GSDV
Sbjct 291 ILATCPAGSGNSAAAAITQAVGIQPSGVETHTFNYMDLVNYLAVGNLNPQPLGYVGGSDV 350
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T N A AQ I AA+ +P AGR A++ +L GA+ + P +AFPW RQSA+VQWYV
Sbjct 351 FPTVNAAVAQGIAAAVNAFPRNAGRMLAIMHALDGALATVAPAATAFPWRRQSALVQWYV 410
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G A A WL+ AH AVQ +SVGGYVNYLEAN + ++YFG NLSRL+ VR+KYDP
Sbjct 411 ET--SGDPAAATNWLASAHQAVQQYSVGGYVNYLEANQSPARYFGPNLSRLSAVRQKYDP 468
Query 181 DRIMYSGLDF 190
R+M+SGL++
Sbjct 469 GRVMFSGLNY 478
>gi|336459403|gb|EGO38345.1| FAD/FMN-dependent dehydrogenase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=478
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/190 (56%), Positives = 132/190 (70%), Gaps = 2/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG + A AI AVG+QPSGVE T MDLV YLA G+ P G+V GSDV
Sbjct 291 ILATCPAGSGNSAAAAITQAVGIQPSGVETHTFNYMDLVNYLAVGNLNPQPLGYVGGSDV 350
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T N A AQ I AA+ +P AGR A++ +L GA+ + P +AFPW QSA+VQWYV
Sbjct 351 FPTVNAAVAQGIAAAVNAFPRNAGRMLAIMHALDGALATVAPAATAFPWRLQSALVQWYV 410
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
T G A A WL+ AH AVQ +SVGGYVNYLEAN + ++YFG NLSRL+ VR+KYDP
Sbjct 411 ET--SGDPAAATNWLASAHQAVQQYSVGGYVNYLEANQSPARYFGPNLSRLSAVRQKYDP 468
Query 181 DRIMYSGLDF 190
R+M+SGL++
Sbjct 469 GRVMFSGLNY 478
>gi|240172438|ref|ZP_04751097.1| putative oxidoreductase [Mycobacterium kansasii ATCC 12478]
Length=470
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/190 (53%), Positives = 130/190 (69%), Gaps = 2/190 (1%)
Query 1 VLASCPARSGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDV 60
+LA+CPA SG AVA+AI SAVG QP+G E+ T +DLVRYLA + P G+V GSDV
Sbjct 283 ILATCPAGSGGAVANAITSAVGAQPTGTENHTFNYLDLVRYLAVNNLNPSPLGYVGGSDV 342
Query 61 IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYV 120
T NPA A I AA+ +P AGR A++ +L G + + P +AFPW R A+VQWYV
Sbjct 343 FPTVNPAVAAGIAAAVDAFPRDAGRMLAIMHALDGTLASVAPGATAFPWRRHGALVQWYV 402
Query 121 NTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
+ G A A WL+ AH AVQ +SVGGYVNYLEA+ S+YFG NL+RL+ +R+KYDP
Sbjct 403 E--NAGSPAAATGWLNTAHQAVQRYSVGGYVNYLEASQPPSRYFGPNLARLSAIRQKYDP 460
Query 181 DRIMYSGLDF 190
R+M+SG++
Sbjct 461 GRVMFSGMNL 470
>gi|284032270|ref|YP_003382201.1| FAD linked oxidase domain-containing protein [Kribbella flavida
DSM 17836]
gi|283811563|gb|ADB33402.1| FAD linked oxidase domain protein [Kribbella flavida DSM 17836]
Length=512
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/178 (44%), Positives = 100/178 (57%), Gaps = 9/178 (5%)
Query 9 SGAAVADAIKSAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDVIGTTNPAA 68
S + A ++S VG + S M+ VRYL GG TT P G++AGSDV+ P
Sbjct 327 SATSAAAELESFVGAKGSARTITVKTHMEAVRYLGGG-TTSPRSGWLAGSDVL--RGPMD 383
Query 69 AQAIVAAIGTWPPAAGR---ASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVN---T 122
A AI +G AA A+A++D LGG + GSA+PW V+QWY
Sbjct 384 AGAIDGLLGVVKAAARAKLVATAILDPLGGQAANQPAGGSAWPWRSALGVIQWYAELPGQ 443
Query 123 PSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEANAAASQYFGANLSRLTTVRRKYDP 180
PS Q+ A ++SD H AV FS GGYVNYLEA A S Y+G++L RL TV++KYDP
Sbjct 444 PSTAQLRAAQGFVSDGHRAVARFSAGGYVNYLEAGRAVSSYYGSSLPRLRTVKQKYDP 501
>gi|271962989|ref|YP_003337185.1| histidine kinase [Streptosporangium roseum DSM 43021]
gi|270506164|gb|ACZ84442.1| histidine kinase [Streptosporangium roseum DSM 43021]
Length=487
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/123 (37%), Positives = 65/123 (53%), Gaps = 13/123 (10%)
Query 65 NPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVNTPS 124
+ A A+A+VA + G + L+D+LGGAVG + PE +AFP VQ+Y +
Sbjct 369 SEAGARALVAEVAR----PGNHTVLLDALGGAVGRVRPEATAFPHRAALYSVQYYAHR-- 422
Query 125 DGQVATANKWLSDAHHAVQ-HFSVGGYVNYLEANAAA--SQYFGANLSRLTTVRRKYDPD 181
A A W AH +++ HF YVNY++A S Y+GAN RL V+ +DP
Sbjct 423 ----AGAASWARTAHASMRPHFGDHAYVNYVDAELRGWRSAYYGANAERLARVKAAHDPG 478
Query 182 RIM 184
R+
Sbjct 479 RLF 481
>gi|340528688|gb|AEK43893.1| hypothetical protein RAM_27080 [Amycolatopsis mediterranei S699]
Length=474
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/106 (40%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query 83 AGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQW-YVNTPSDGQVATANKWLSDAHHA 141
A R LIDS GGA+ + +AFP A Q+ + TP DG A A + L
Sbjct 351 APRVGTLIDSAGGAIARVGARETAFPHRSALASFQFLHGATPEDGGEAEARRALGAVRDG 410
Query 142 V-QHFSVGGYVNYLEANAA--ASQYFGANLSRLTTVRRKYDPDRIM 184
+ F GYVNYL+ A Y+G NL+RL V RKYDPD +
Sbjct 411 LGPEFGATGYVNYLDPEMPDWARAYYGVNLARLRAVARKYDPDGLF 456
>gi|300787189|ref|YP_003767480.1| hypothetical protein AMED_5316 [Amycolatopsis mediterranei U32]
gi|299796703|gb|ADJ47078.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=480
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/106 (40%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query 83 AGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQW-YVNTPSDGQVATANKWLSDAHHA 141
A R LIDS GGA+ + +AFP A Q+ + TP DG A A + L
Sbjct 357 APRVGTLIDSAGGAIARVGARETAFPHRSALASFQFLHGATPEDGGEAEARRALGAVRDG 416
Query 142 V-QHFSVGGYVNYLEANAA--ASQYFGANLSRLTTVRRKYDPDRIM 184
+ F GYVNYL+ A Y+G NL+RL V RKYDPD +
Sbjct 417 LGPEFGATGYVNYLDPEMPDWARAYYGVNLARLRAVARKYDPDGLF 462
>gi|312200911|ref|YP_004020972.1| FAD linked oxidase domain protein [Frankia sp. EuI1c]
gi|311232247|gb|ADP85102.1| FAD linked oxidase domain protein [Frankia sp. EuI1c]
Length=533
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/111 (36%), Positives = 58/111 (53%), Gaps = 6/111 (5%)
Query 80 PPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVNTPSDG---QVATANKWLS 136
P A ++DS GGA+ + P +AF A VQ++ + P+ V A+ W+
Sbjct 415 PLAKASGGIILDSWGGAISKVSPSETAFVHRDAIASVQYFASYPAGATAENVRAAHGWVR 474
Query 137 DAHHAVQ-HFSVGGYVNYLEANAA--ASQYFGANLSRLTTVRRKYDPDRIM 184
D AV + S Y NY++ + A A Y+GANL RLT ++R YDPD +
Sbjct 475 DTAAAVAPYVSDQAYQNYIDPDLANWAQAYYGANLPRLTAIKRHYDPDNLF 525
>gi|302524094|ref|ZP_07276436.1| predicted protein [Streptomyces sp. AA4]
gi|302432989|gb|EFL04805.1| predicted protein [Streptomyces sp. AA4]
Length=487
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/176 (33%), Positives = 80/176 (46%), Gaps = 27/176 (15%)
Query 19 SAVGVQPSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDVIGTTNPAAAQAIVAAIGT 78
S V PS KTL + Y +G + FVA S +I T+P I
Sbjct 323 SGFSVTPSSRTMKTLGYGAAMNYFSGSSER---QTFVASSRII--TDPVDGGKIADL--- 374
Query 79 WPPAAGRASA--LIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQ------VAT 130
A+G LID LGGAVG + P +AFP + A +Q Y + Q V+T
Sbjct 375 ---ASGHKGMDLLIDGLGGAVGQIAPTATAFPHRKALASIQVYAPATASSQDSARKSVST 431
Query 131 ANKWLSDAHHAVQHFSVGGYVNYLEANAA--ASQYFGANLSRLTTVRRKYDPDRIM 184
L+DA + GGYVNY++ + S Y+G N +RL V +KYDP+ +
Sbjct 432 VVAGLADAG------ARGGYVNYIDPDLPDWKSAYYGDNAARLDQVAKKYDPNGVF 481
>gi|290959341|ref|YP_003490523.1| berberine bridge protein [Streptomyces scabiei 87.22]
gi|260648867|emb|CBG71981.1| putative berberine bridge enzyme [Streptomyces scabiei 87.22]
Length=514
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/104 (34%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query 84 GRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATANKWLSDAHHAV- 142
G S + +LGG V + P +AF R + Q+ + S ATA WL AH ++
Sbjct 405 GAGSIALTALGGQVNRVSPTATAFVHRRSRMLAQYLASWKSGTSGATAQSWLDKAHKSMA 464
Query 143 QHFSVGGYVNYLEANAA--ASQYFGANLSRLTTVRRKYDPDRIM 184
+H S Y NY + Y+G + RLTT+++KYDP+R
Sbjct 465 RHASGAAYQNYTDPTLTDWKKAYYGDAVPRLTTLKKKYDPNRFF 508
>gi|311900287|dbj|BAJ32695.1| putative oxidoreductase [Kitasatospora setae KM-6054]
Length=515
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query 89 LIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVNTPSDG--QVATANKWLSDAHHAVQHFS 146
L+DSLGGAVG++ P+G+AFP A Q Y S +V A + D + +
Sbjct 409 LLDSLGGAVGEIAPDGTAFPHRGSLASAQVYAAATSANADRVRAAVDEIRDG--LARLGA 466
Query 147 VGGYVNYLEANAA--ASQYFGANLSRLTTVRRKYDPDRIM 184
G YVNY++A Y+G NL RL V R+YDPD +
Sbjct 467 PGAYVNYIDATLPDWGRAYYGDNLPRLREVARRYDPDGVF 506
>gi|345008298|ref|YP_004810652.1| FAD linked oxidase domain-containing protein [Streptomyces violaceusniger
Tu 4113]
gi|344034647|gb|AEM80372.1| FAD linked oxidase domain protein [Streptomyces violaceusniger
Tu 4113]
Length=538
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (32%), Positives = 55/101 (55%), Gaps = 3/101 (2%)
Query 87 SALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATANKWLSDAHHAVQHFS 146
S + +LGGAV + P ++F R + Q+ + + G N WL AH A++ ++
Sbjct 432 SIALTALGGAVNRVSPTTTSFVHRRSRFLAQYTASWAASGSGTAGNAWLDGAHTAMRRYA 491
Query 147 VG-GYVNYLEANAAA--SQYFGANLSRLTTVRRKYDPDRIM 184
G Y NY +A+ S Y+G+ +LT ++++YDPDR+
Sbjct 492 SGAAYQNYTDASLKDWRSAYYGSAADKLTRLKKRYDPDRLF 532
>gi|229083655|ref|ZP_04215980.1| FAD linked oxidase domain protein [Bacillus cereus Rock3-44]
gi|228699673|gb|EEL52333.1| FAD linked oxidase domain protein [Bacillus cereus Rock3-44]
Length=446
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/145 (28%), Positives = 69/145 (48%), Gaps = 8/145 (5%)
Query 39 VRYLAGGHTTYPPEGFVAGSDVIGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVG 98
V++ G+ PE F + P A I+ + P AS SL GAV
Sbjct 290 VKFFNSGNI---PEKFKRSGSYVYKPIPLAGIQILKHFLSHAPNPS-ASVWHQSLVGAVE 345
Query 99 DMDPEGSAFPWCRQSAVVQWYVNT-PSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEAN 157
D+ P +A+ + R++ + Q Y++ D + +W+ + A+ +++G YVN+ + +
Sbjct 346 DITPSETAY-FHRKAIIAQEYISAWECDNEEEENIQWIKNLRKAMSPYTLGDYVNWPDID 404
Query 158 AAASQ--YFGANLSRLTTVRRKYDP 180
Q Y+G N S+L V+ KYDP
Sbjct 405 IKDWQRTYYGTNFSKLRAVKTKYDP 429
>gi|154685342|ref|YP_001420503.1| YgaK [Bacillus amyloliquefaciens FZB42]
gi|154351193|gb|ABS73272.1| YgaK [Bacillus amyloliquefaciens FZB42]
Length=455
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/102 (33%), Positives = 53/102 (52%), Gaps = 4/102 (3%)
Query 86 ASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATAN-KWLSDAHHAVQH 144
AS SLGGA G + P+ +AF + R + + Q Y+ T + + N +W+ ++
Sbjct 340 ASVWQQSLGGAAGRIAPDQTAF-YYRNAIIAQEYITTWTSAEEERQNVRWIEGLRTSLSR 398
Query 145 FSVGGYVNY--LEANAAASQYFGANLSRLTTVRRKYDPDRIM 184
++G YVN+ E Y+G N+ RL V+ KYDP+ I
Sbjct 399 ETMGDYVNWPDREIRNWLQTYYGENVHRLRQVKTKYDPENIF 440
>gi|290955746|ref|YP_003486928.1| berberine bridge protein [Streptomyces scabiei 87.22]
gi|260645272|emb|CBG68358.1| putative berberine bridge enzyme [Streptomyces scabiei 87.22]
Length=451
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/129 (32%), Positives = 64/129 (50%), Gaps = 14/129 (10%)
Query 67 AAAQAIVAAIGTWPPAA---GRASALIDSLGGAVGDMDPEGSAFP----WCRQSAVVQWY 119
A ++ A+ WP + G AL + GGA+ + +AFP S W
Sbjct 320 AGVDTMLTALRKWPGSGNPDGAGIALF-TWGGAINRVPVTETAFPHRDVLFLVSMDTSWS 378
Query 120 VNTPSDGQVATAN-KWLSDAHHAV-QHFSVGGYVNYLEANAAASQ--YFGANLSRLTTVR 175
+ P G+V AN WL++ H A+ H YVN+ + + + +Q YFG NL RL ++
Sbjct 379 TDDP--GEVRRANLDWLTELHAAMGAHARDASYVNFADPDLSGAQAAYFGPNLPRLREIK 436
Query 176 RKYDPDRIM 184
R+YDP+R+
Sbjct 437 RRYDPERVF 445
>gi|337763465|emb|CCB72173.1| Lipoprotein [Streptomyces cattleya NRRL 8057]
Length=512
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/104 (33%), Positives = 54/104 (52%), Gaps = 8/104 (7%)
Query 84 GRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATANKWLSDAHHAVQ 143
G S + +LGGAV + P +AF R + Q+ + P + + WL HHA++
Sbjct 408 GAGSVALTALGGAVNRVAPTATAFVHRRSRFLAQYLASGPLE-----SAAWLPGIHHAMR 462
Query 144 HFSVGG-YVNYLEANAAASQ--YFGANLSRLTTVRRKYDPDRIM 184
++ G Y NY++ + Y+G L RLT V+R+YDP R+
Sbjct 463 PYASGAAYQNYIDPTLTDWRRAYYGPALDRLTAVKRQYDPQRLF 506
>gi|297158512|gb|ADI08224.1| lipoprotein [Streptomyces bingchenggensis BCW-1]
Length=540
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/115 (32%), Positives = 56/115 (49%), Gaps = 3/115 (2%)
Query 73 VAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATAN 132
V A G G S + +LGGAV + P +AF R + Q+ + + G
Sbjct 420 VEAYGRRTSGGGAVSIALTALGGAVNRVAPTATAFVHRRSRFLAQYTASWAAGGAGTAQL 479
Query 133 KWLSDAHHAV-QHFSVGGYVNYLEANAAA--SQYFGANLSRLTTVRRKYDPDRIM 184
WL H A+ +H S Y NY +A+ + Y+G+ RLT ++++YDPDR+
Sbjct 480 SWLDGVHTAMRRHASGAAYQNYTDASLKDWRTAYYGSAADRLTKLKKRYDPDRLF 534
>gi|297193507|ref|ZP_06910905.1| lipoprotein [Streptomyces pristinaespiralis ATCC 25486]
gi|297151813|gb|EDY62126.2| lipoprotein [Streptomyces pristinaespiralis ATCC 25486]
Length=522
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (32%), Positives = 52/101 (52%), Gaps = 3/101 (2%)
Query 87 SALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATANKWLSDAHHAVQHFS 146
S + +LGGAV +DP ++F R + Q+ A WL D H +++ ++
Sbjct 416 SIALTALGGAVNRVDPLATSFVHRRSRMLAQYIAAWRPGTGGAAQQSWLRDTHASLRRYA 475
Query 147 VGG-YVNYLEANAAASQ--YFGANLSRLTTVRRKYDPDRIM 184
G Y NY + + + Y+G L RLT ++R+YDPDR+
Sbjct 476 SGAAYQNYADPTLSDWRRAYYGPALDRLTRLKRRYDPDRVF 516
>gi|150018781|ref|YP_001311035.1| FAD linked oxidase domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149905246|gb|ABR36079.1| FAD linked oxidase domain protein [Clostridium beijerinckii NCIMB
8052]
Length=457
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/152 (24%), Positives = 69/152 (46%), Gaps = 5/152 (3%)
Query 36 MDLVRYLAGGHTTYPPEGFVAGSDVIGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGG 95
+D+ R + GH Y AG V + + + I+ + A A+ + LGG
Sbjct 293 LDVNRRIQDGHPLYEKYK-SAGRFVYKDYSRSEMKKIIELVEERAKGAVYAAVSLYGLGG 351
Query 96 AVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATAN-KWLSDAHHAVQHFSVGGYVNY- 153
A+ + D +AF + R + + + + + + A N +W+ + + + G Y+N+
Sbjct 352 AIMEKDKNDTAF-YYRDAKFIMGFQSVWEEAEYAPMNIEWVKEKLKYINSITTGSYINFP 410
Query 154 -LEANAAASQYFGANLSRLTTVRRKYDPDRIM 184
+ + +Y+G NL +L V+ KYDP +
Sbjct 411 CEDIDEYEKEYYGENLEKLREVKLKYDPYEVF 442
>gi|228906137|ref|ZP_04070026.1| FAD linked oxidase domain protein [Bacillus thuringiensis IBL
200]
gi|228853546|gb|EEM98314.1| FAD linked oxidase domain protein [Bacillus thuringiensis IBL
200]
Length=422
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/150 (25%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query 39 VRYLAGGHTTYPPEGFVAGSDVIGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVG 98
V + GG+ PE F + P I+ + P AS SL GAV
Sbjct 268 VEFFNGGNI---PENFKRSGSYVYKPIPLKGIQIMQYFLSHAPNKD-ASIWHQSLIGAVE 323
Query 99 DMDPEGSAFPWCRQSAVVQWYVNT-PSDGQVATANKWLSDAHHAVQHFSVGGYVNY--LE 155
++ P +A+ + R++ + Q Y+ + D + +W+ D ++ +++G YVN+ ++
Sbjct 324 NISPNETAY-FHRKAIIAQEYITSWKCDDEENRNIRWVKDLRESLDPYTLGDYVNWPDID 382
Query 156 ANAAASQYFGANLSRLTTVRRKYDPDRIMY 185
+ Y+G+N RL V+ YDP + +
Sbjct 383 IKNWETSYYGSNFHRLRKVKTMYDPCNVFH 412
>gi|293374554|ref|ZP_06620874.1| FAD binding domain protein [Turicibacter sanguinis PC909]
gi|292646820|gb|EFF64810.1| FAD binding domain protein [Turicibacter sanguinis PC909]
Length=443
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (45%), Gaps = 15/150 (10%)
Query 37 DLVRYLAGGHTTYPPEGFVAGSDVIGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGA 96
D +Y +GG Y V +++ A ++ AI + +GGA
Sbjct 299 DFEKYRSGGRFIYRHYTEVELKEMLHLIEVRAEGSLYTAITFY------------GVGGA 346
Query 97 VGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATANK-WLSDAHHAVQHFSVGGYVNY-L 154
V D+ P+ SA+ + R + + + + + + A N+ W+ + + ++ G ++N+ +
Sbjct 347 VSDVSPQESAY-YYRDAIFILGFQSVWEESKYAPTNRQWVEERFKILSTYTEGSFINFPI 405
Query 155 EANAAASQYFGANLSRLTTVRRKYDPDRIM 184
QY+G NL RL V+ KYDPD
Sbjct 406 AQQNYEKQYYGENLPRLKLVKAKYDPDNFF 435
>gi|126653149|ref|ZP_01725273.1| probable reticuline oxidase [Bacillus sp. B14905]
gi|126590065|gb|EAZ84191.1| probable reticuline oxidase [Bacillus sp. B14905]
Length=451
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/144 (28%), Positives = 69/144 (48%), Gaps = 6/144 (4%)
Query 46 HTTYPP-EGFVA-GSDVIGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPE 103
TYPP E F + G V + + IV + + P + A+ +LGGA+ ++ E
Sbjct 302 EATYPPFEKFKSTGRFVQRSYTLDELENIVKLVESPPDGSIYAAISFYALGGAINNISKE 361
Query 104 GSAFPWCRQSAVVQWYVNTPSDGQVATANK-WLSDAHHAVQHFSVGGYVNYLEANAA--A 160
+AF + R + + + + + A N+ W+ + +++ + G YVN+ +N
Sbjct 362 ETAF-YFRDAKYIMGIQSVWVEDKYAKNNQEWVRERFEIIKNVTKGSYVNFPISNLKNFE 420
Query 161 SQYFGANLSRLTTVRRKYDPDRIM 184
+YFG N RL V +KYDP +
Sbjct 421 KEYFGGNAQRLNQVNQKYDPFNVF 444
>gi|325843483|ref|ZP_08167993.1| FAD binding domain protein [Turicibacter sp. HGF1]
gi|325489302|gb|EGC91678.1| FAD binding domain protein [Turicibacter sp. HGF1]
Length=443
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (45%), Gaps = 15/150 (10%)
Query 37 DLVRYLAGGHTTYPPEGFVAGSDVIGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGA 96
D +Y +GG Y V +++ A ++ AI + +GGA
Sbjct 299 DFEKYRSGGRFIYRHYTEVELKEMLHLIEVRAEGSLYTAITFY------------GVGGA 346
Query 97 VGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATANK-WLSDAHHAVQHFSVGGYVNY-L 154
V D+ P+ SA+ + R + + + + + + A N+ W+ + + ++ G ++N+ +
Sbjct 347 VSDVSPQESAY-YYRDAIFILGFQSVWEESKYAPTNRQWVEERFKILSTYTEGSFINFPI 405
Query 155 EANAAASQYFGANLSRLTTVRRKYDPDRIM 184
QY+G NL RL V+ KYDPD
Sbjct 406 AQQNYEKQYYGENLPRLKLVKAKYDPDNFF 435
>gi|86738766|ref|YP_479166.1| twin-arginine translocation pathway signal [Frankia sp. CcI3]
gi|86565628|gb|ABD09437.1| Twin-arginine translocation pathway signal [Frankia sp. CcI3]
Length=532
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/110 (36%), Positives = 52/110 (48%), Gaps = 6/110 (5%)
Query 81 PAAGRASALIDSLGGAVGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVA--TANK-WLSD 137
P AG ++DS GGA+ + P +AF A Q+ D A AN+ WL
Sbjct 414 PGAGPGGVILDSWGGAINRVGPGDTAFVHRNTLASAQFVAGYSVDASPADKEANQSWLRS 473
Query 138 AHHAVQHF-SVGGYVNYLEANAA--ASQYFGANLSRLTTVRRKYDPDRIM 184
A F S Y NY++ + A Y+GANL RL V+R YDPD +
Sbjct 474 TVAATAPFMSSSAYQNYIDPDLTTWADAYYGANLPRLRQVKRAYDPDNLF 523
>gi|302387530|ref|YP_003823352.1| FAD linked oxidase domain protein [Clostridium saccharolyticum
WM1]
gi|302198158|gb|ADL05729.1| FAD linked oxidase domain protein [Clostridium saccharolyticum
WM1]
Length=463
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (28%), Positives = 66/140 (48%), Gaps = 6/140 (4%)
Query 49 YPP-EGFVAGSDV-IGTTNPAAAQAIVAAIGTWPPAAGRASALIDSLGGAVGDMDPEGSA 106
YPP E F + S + + + I I + AS +LGG V ++D E +A
Sbjct 302 YPPYEKFKSASRFALRDFSNCESLKIAGLIKERAEGSVYASISFYALGGKVAEVDEEETA 361
Query 107 FPWCRQSAVVQWYVNTPSDGQVATANKWLSDAHHAVQHFSVGGYVNYLEAN--AAASQYF 164
F + R++ + W ++T D W++D ++ + G YVN+ A +Y+
Sbjct 362 FFY-RKANYIVW-LDTVFDEHKCKNAAWIADRFRYLESVTKGSYVNFPYACLPCYLEEYY 419
Query 165 GANLSRLTTVRRKYDPDRIM 184
G+++ RL V+ KYDP I
Sbjct 420 GSHVCRLKKVKEKYDPFNIF 439
>gi|315647202|ref|ZP_07900315.1| FAD linked oxidase domain protein [Paenibacillus vortex V453]
gi|315277404|gb|EFU40733.1| FAD linked oxidase domain protein [Paenibacillus vortex V453]
Length=473
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/161 (25%), Positives = 69/161 (43%), Gaps = 7/161 (4%)
Query 25 PSGVEHKTLRRMDLVRYLAGGHTTYPPEGFVAGSDVIGTTNPAAAQAIVAAIGTWPPAAG 84
P V +T+ ++ ++ A G P+ + G+ P + I + P
Sbjct 283 PVKVMVRTVPFIEATQFFAAGDLNLEPKFKITGAFGYKPLPPEGVRMIRDFLSKAP--NK 340
Query 85 RASALIDSLGGA---VGDMDPEGSAFPWCRQSAVVQWYVNTPSDGQVATANKWLSDAHHA 141
A+ SLGGA V + P +A+P + V + +D + +W+ A
Sbjct 341 HATVWCQSLGGAGSAVSRVSPTATAYPHRKAETVYELSARWRNDKEQQRNIQWVKRFRKA 400
Query 142 VQHFSVGGYVNY--LEANAAASQYFGANLSRLTTVRRKYDP 180
++ + VG YVN+ L Y+G N +RL V++KYDP
Sbjct 401 LRPYVVGDYVNFPDLGIKNWPKSYYGVNFARLKRVKQKYDP 441
Lambda K H
0.320 0.133 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 397943428394
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40