BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3354 Length=129 Score E Sequences producing significant alignments: (Bits) Value gi|15610490|ref|NP_217871.1| hypothetical protein Rv3354 [Mycoba... 255 1e-66 gi|340628336|ref|YP_004746788.1| hypothetical protein MCAN_33801... 254 3e-66 gi|31794537|ref|NP_857030.1| hypothetical protein Mb3389 [Mycoba... 253 5e-66 gi|183981200|ref|YP_001849491.1| hypothetical protein MMAR_1178 ... 141 3e-32 gi|118617103|ref|YP_905435.1| hypothetical protein MUL_1430 [Myc... 141 3e-32 gi|15827284|ref|NP_301547.1| hypothetical protein ML0676 [Mycoba... 124 6e-27 gi|2326685|emb|CAB10996.1| hypothetical protein MLCB1779.15 [Myc... 124 7e-27 gi|240169076|ref|ZP_04747735.1| hypothetical protein MkanA1_0716... 121 4e-26 gi|118465192|ref|YP_883457.1| hypothetical protein MAV_4321 [Myc... 105 2e-21 gi|41409559|ref|NP_962395.1| hypothetical protein MAP3461 [Mycob... 105 2e-21 gi|254820263|ref|ZP_05225264.1| hypothetical protein MintA_10061... 105 3e-21 gi|254776749|ref|ZP_05218265.1| hypothetical protein MaviaA2_190... 104 3e-21 gi|342861567|ref|ZP_08718214.1| hypothetical protein MCOL_21881 ... 103 6e-21 gi|333991832|ref|YP_004524446.1| hypothetical protein JDM601_319... 103 7e-21 gi|296168837|ref|ZP_06850510.1| conserved hypothetical protein [... 103 7e-21 gi|342860732|ref|ZP_08717382.1| LprJ [Mycobacterium colombiense ... 95.9 2e-18 gi|254821548|ref|ZP_05226549.1| LprJ [Mycobacterium intracellula... 94.4 6e-18 gi|15608828|ref|NP_216206.1| lipoprotein LprJ [Mycobacterium tub... 94.0 7e-18 gi|31792876|ref|NP_855369.1| lipoprotein LprJ [Mycobacterium bov... 93.6 9e-18 gi|118617307|ref|YP_905639.1| lipoprotein, LprJ [Mycobacterium u... 92.8 1e-17 gi|183982510|ref|YP_001850801.1| lipoprotein, LprJ [Mycobacteriu... 92.0 2e-17 gi|339294645|gb|AEJ46756.1| lipoprotein LprJ [Mycobacterium tube... 91.3 4e-17 gi|118470116|ref|YP_888950.1| hypothetical protein MSMEG_4689 [M... 89.7 1e-16 gi|41407495|ref|NP_960331.1| LprJ [Mycobacterium avium subsp. pa... 89.4 2e-16 gi|336457849|gb|EGO36843.1| Protein of unknown function (DUF732)... 89.0 2e-16 gi|254775533|ref|ZP_05217049.1| LprJ protein [Mycobacterium aviu... 88.2 4e-16 gi|118465764|ref|YP_882265.1| LprJ protein [Mycobacterium avium ... 87.8 4e-16 gi|240170139|ref|ZP_04748798.1| lipoprotein, LprJ [Mycobacterium... 85.1 3e-15 gi|108800570|ref|YP_640767.1| hypothetical protein Mmcs_3604 [My... 80.9 6e-14 gi|296164589|ref|ZP_06847157.1| LprJ protein [Mycobacterium para... 80.1 9e-14 gi|118466065|ref|YP_882736.1| hypothetical protein MAV_3558 [Myc... 74.7 4e-12 gi|118471785|ref|YP_887985.1| hypothetical protein MSMEG_3681 [M... 74.3 5e-12 gi|41408884|ref|NP_961720.1| hypothetical protein MAP2786c [Myco... 70.5 7e-11 gi|296171947|ref|ZP_06852992.1| conserved hypothetical protein [... 69.7 1e-10 gi|315443272|ref|YP_004076151.1| hypothetical protein Mspyr1_164... 61.2 4e-08 gi|145222805|ref|YP_001133483.1| hypothetical protein Mflv_2217 ... 61.2 5e-08 gi|108800938|ref|YP_641135.1| hypothetical protein Mmcs_3974 [My... 60.8 7e-08 gi|120405430|ref|YP_955259.1| hypothetical protein Mvan_4478 [My... 59.3 2e-07 gi|342861294|ref|ZP_08717942.1| hypothetical protein MCOL_20521 ... 57.0 9e-07 gi|342858463|ref|ZP_08715118.1| hypothetical protein MCOL_06296 ... 57.0 9e-07 gi|118618631|ref|YP_906963.1| hypothetical protein MUL_3300 [Myc... 55.8 2e-06 gi|254818543|ref|ZP_05223544.1| hypothetical protein MintA_01396... 55.8 2e-06 gi|254776404|ref|ZP_05217920.1| hypothetical protein MaviaA2_172... 55.1 3e-06 gi|333988948|ref|YP_004521562.1| hypothetical protein JDM601_030... 55.1 3e-06 gi|296164795|ref|ZP_06847355.1| conserved hypothetical protein [... 55.1 4e-06 gi|15841274|ref|NP_336311.1| hypothetical protein MT1854 [Mycoba... 54.7 4e-06 gi|342860982|ref|ZP_08717631.1| hypothetical protein MCOL_18962 ... 54.3 5e-06 gi|254823260|ref|ZP_05228261.1| hypothetical protein MintA_25244... 53.5 1e-05 gi|296169915|ref|ZP_06851526.1| conserved hypothetical protein [... 52.0 3e-05 gi|289554423|ref|ZP_06443633.1| conserved hypothetical protein [... 52.0 3e-05 >gi|15610490|ref|NP_217871.1| hypothetical protein Rv3354 [Mycobacterium tuberculosis H37Rv] gi|15842950|ref|NP_337987.1| hypothetical protein MT3462 [Mycobacterium tuberculosis CDC1551] gi|148663217|ref|YP_001284740.1| hypothetical protein MRA_3394 [Mycobacterium tuberculosis H37Ra] 68 more sequence titles Length=129 Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 129/129 (100%), Positives = 129/129 (100%), Gaps = 0/129 (0%) Query 1 MNLRRHQTLTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALG 60 MNLRRHQTLTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALG Sbjct 1 MNLRRHQTLTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALG 60 Query 61 QSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPAL 120 QSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPAL Sbjct 61 QSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPAL 120 Query 121 PDMPGLPGS 129 PDMPGLPGS Sbjct 121 PDMPGLPGS 129 >gi|340628336|ref|YP_004746788.1| hypothetical protein MCAN_33801 [Mycobacterium canettii CIPT 140010059] gi|340006526|emb|CCC45711.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=129 Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 128/129 (99%), Positives = 129/129 (100%), Gaps = 0/129 (0%) Query 1 MNLRRHQTLTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALG 60 MNLRRHQTLTLRLLAASAGIL+AAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALG Sbjct 1 MNLRRHQTLTLRLLAASAGILTAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALG 60 Query 61 QSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPAL 120 QSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPAL Sbjct 61 QSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPAL 120 Query 121 PDMPGLPGS 129 PDMPGLPGS Sbjct 121 PDMPGLPGS 129 >gi|31794537|ref|NP_857030.1| hypothetical protein Mb3389 [Mycobacterium bovis AF2122/97] gi|121639281|ref|YP_979505.1| hypothetical protein BCG_3426 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991778|ref|YP_002646467.1| hypothetical protein JTY_3426 [Mycobacterium bovis BCG str. Tokyo 172] gi|31620133|emb|CAD95533.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121494929|emb|CAL73415.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774893|dbj|BAH27699.1| hypothetical protein JTY_3426 [Mycobacterium bovis BCG str. Tokyo 172] gi|341603306|emb|CCC65987.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=129 Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 128/129 (99%), Positives = 128/129 (99%), Gaps = 0/129 (0%) Query 1 MNLRRHQTLTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALG 60 MNLRRHQTLTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALG Sbjct 1 MNLRRHQTLTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALG 60 Query 61 QSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPAL 120 QSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMAD ASGNLPAL Sbjct 61 QSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADAASGNLPAL 120 Query 121 PDMPGLPGS 129 PDMPGLPGS Sbjct 121 PDMPGLPGS 129 >gi|183981200|ref|YP_001849491.1| hypothetical protein MMAR_1178 [Mycobacterium marinum M] gi|183174526|gb|ACC39636.1| conserved secreted protein [Mycobacterium marinum M] Length=138 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 84/137 (62%), Positives = 101/137 (74%), Gaps = 9/137 (6%) Query 1 MNLRRHQTLTLRLLAASAGILSAAAFAAPAQA-NPVDDAFIAALNNAGVNYGDPVDAKAL 59 M R+Q LT+RLLA +AG+L A+A A + VDDAFI ALN AGVNYGD A+AL Sbjct 1 MRAWRYQPLTVRLLAGAAGLLIASAALAAPAEADSVDDAFINALNAAGVNYGDAGGAEAL 60 Query 60 GQSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNL-- 117 G+SVCP+L+EPGGSFN+A + VVA GMS +MA TFTSIAISMYCPSVMA+V SGNL Sbjct 61 GRSVCPVLSEPGGSFNSAASKVVAGGSGMSPEMAATFTSIAISMYCPSVMANVTSGNLPL 120 Query 118 ------PALPDMPGLPG 128 PA+P +PG+PG Sbjct 121 QGIPGVPAIPGVPGVPG 137 >gi|118617103|ref|YP_905435.1| hypothetical protein MUL_1430 [Mycobacterium ulcerans Agy99] gi|118569213|gb|ABL03964.1| conserved secreted protein [Mycobacterium ulcerans Agy99] Length=138 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 84/137 (62%), Positives = 102/137 (75%), Gaps = 9/137 (6%) Query 1 MNLRRHQTLTLRLLAASAGILSAAAFAAPAQA-NPVDDAFIAALNNAGVNYGDPVDAKAL 59 M R+Q LT+RLLA +AG+L+A+A A + VDDAFI ALN AGVNYGD A+AL Sbjct 1 MRAWRYQPLTVRLLAGAAGLLTASAALAAPAEADSVDDAFINALNAAGVNYGDAGGAEAL 60 Query 60 GQSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNL-- 117 G+SVCP+L+EPGGSFN+A + VVA GMS +MA TFTSIAISMYCPSVMA+V SGNL Sbjct 61 GRSVCPVLSEPGGSFNSAASKVVAGGSGMSPEMAATFTSIAISMYCPSVMANVTSGNLPL 120 Query 118 ------PALPDMPGLPG 128 PA+P +PG+PG Sbjct 121 QGIPGVPAIPGVPGVPG 137 >gi|15827284|ref|NP_301547.1| hypothetical protein ML0676 [Mycobacterium leprae TN] gi|221229762|ref|YP_002503178.1| hypothetical protein MLBr_00676 [Mycobacterium leprae Br4923] gi|13092833|emb|CAC30185.1| hypothetical protein [Mycobacterium leprae] gi|219932869|emb|CAR70770.1| hypothetical protein MLBr00676 [Mycobacterium leprae Br4923] Length=158 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 69/127 (55%), Positives = 91/127 (72%), Gaps = 2/127 (1%) Query 3 LRRHQTLTLRLLAASAGILSAAAFA-APAQANPVDDAFIAALNNAGVNYGDPVDAKALGQ 61 L R Q LT+RLL A+A + +AA PA+A+ +DD FI ALN+AGVN+G+P A +G Sbjct 32 LFRCQPLTIRLLVATAALFTAATAFEVPAEADAIDDTFIKALNHAGVNFGEPRSAMTMGH 91 Query 62 SVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPALP 121 VCPILA+ GG+F AV + + MS MA+TF IAIS+YCP++MA+VASGNLP+LP Sbjct 92 YVCPILAKSGGNFAAAVQRIRGNSD-MSPQMAETFAKIAISIYCPTMMANVASGNLPSLP 150 Query 122 DMPGLPG 128 PG+PG Sbjct 151 PGPGIPG 157 >gi|2326685|emb|CAB10996.1| hypothetical protein MLCB1779.15 [Mycobacterium leprae] Length=168 Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 69/127 (55%), Positives = 91/127 (72%), Gaps = 2/127 (1%) Query 3 LRRHQTLTLRLLAASAGILSAAAFA-APAQANPVDDAFIAALNNAGVNYGDPVDAKALGQ 61 L R Q LT+RLL A+A + +AA PA+A+ +DD FI ALN+AGVN+G+P A +G Sbjct 42 LFRCQPLTIRLLVATAALFTAATAFEVPAEADAIDDTFIKALNHAGVNFGEPRSAMTMGH 101 Query 62 SVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPALP 121 VCPILA+ GG+F AV + + MS MA+TF IAIS+YCP++MA+VASGNLP+LP Sbjct 102 YVCPILAKSGGNFAAAVQRIRGNSD-MSPQMAETFAKIAISIYCPTMMANVASGNLPSLP 160 Query 122 DMPGLPG 128 PG+PG Sbjct 161 PGPGIPG 167 >gi|240169076|ref|ZP_04747735.1| hypothetical protein MkanA1_07169 [Mycobacterium kansasii ATCC 12478] Length=118 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 65/94 (70%), Positives = 72/94 (77%), Gaps = 0/94 (0%) Query 35 VDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQ 94 +DDAFI ALN+AGVNYGDP A LG SVC LA PGGSFN+A A+VVA GM Q MAQ Sbjct 24 IDDAFIGALNDAGVNYGDPASAVDLGHSVCSTLARPGGSFNSAAATVVAAGTGMPQPMAQ 83 Query 95 TFTSIAISMYCPSVMADVASGNLPALPDMPGLPG 128 FTSIAIS YCP M DVA+GNLP LP +PG+PG Sbjct 84 IFTSIAISTYCPQAMTDVATGNLPGLPQIPGIPG 117 >gi|118465192|ref|YP_883457.1| hypothetical protein MAV_4321 [Mycobacterium avium 104] gi|118166479|gb|ABK67376.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336459687|gb|EGO38621.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp. paratuberculosis S397] Length=167 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/129 (53%), Positives = 92/129 (72%), Gaps = 8/129 (6%) Query 5 RHQTLTLRLLAASAG---ILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQ 61 RHQ T+RLLAA+AG + SA A A A+ N D FI ALN+AG+++G+P +A A+G+ Sbjct 15 RHQPFTIRLLAAAAGLLTVASAFAAPAGAEGN--GDDFIDALNHAGIDFGEPGNAMAVGE 72 Query 62 SVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLP-AL 120 SVCP+L++PGG+F +SV R GMS MA+ FT+IAI YCP MA++ASGNL A+ Sbjct 73 SVCPMLSQPGGNFAAVASSVAGR--GMSPTMARMFTTIAIQTYCPQEMANIASGNLSGAM 130 Query 121 PDMPGLPGS 129 P +PG+PG Sbjct 131 PQVPGMPGQ 139 >gi|41409559|ref|NP_962395.1| hypothetical protein MAP3461 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398390|gb|AAS06011.1| hypothetical protein MAP_3461 [Mycobacterium avium subsp. paratuberculosis K-10] Length=203 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/128 (54%), Positives = 92/128 (72%), Gaps = 8/128 (6%) Query 5 RHQTLTLRLLAASAG---ILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQ 61 RHQ T+RLLAA+AG + SA A A A+ N D FI ALN+AG+++G+P +A A+G+ Sbjct 51 RHQPFTIRLLAAAAGLLTVASAFAAPAGAEGN--GDDFIDALNHAGIDFGEPGNAMAVGE 108 Query 62 SVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLP-AL 120 SVCP+L++PGG+F +SV R GMS MA+ FT+IAI YCP MA++ASGNL A+ Sbjct 109 SVCPMLSQPGGNFAAVASSVAGR--GMSPTMARMFTTIAIQTYCPQEMANIASGNLSGAM 166 Query 121 PDMPGLPG 128 P +PG+PG Sbjct 167 PQVPGMPG 174 >gi|254820263|ref|ZP_05225264.1| hypothetical protein MintA_10061 [Mycobacterium intracellulare ATCC 13950] Length=179 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/128 (54%), Positives = 92/128 (72%), Gaps = 8/128 (6%) Query 5 RHQTLTLRLLAASAG---ILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQ 61 R Q LT+RLLAA+AG + SA A A A+ N D FI ALN+AG+++G+P +A A+G+ Sbjct 2 RQQPLTIRLLAAAAGLLTVASAFAAPAEAEGN--GDDFIDALNHAGIDFGEPGNAMAVGE 59 Query 62 SVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLP-AL 120 S+CP+LA+PGGSF A +S+ R GMS MA FT+IAI YCP MA++ASGNL A+ Sbjct 60 SICPMLAQPGGSFAGAASSISGR--GMSPQMASMFTTIAIQTYCPQEMANIASGNLSGAM 117 Query 121 PDMPGLPG 128 P +PG+PG Sbjct 118 PQVPGMPG 125 >gi|254776749|ref|ZP_05218265.1| hypothetical protein MaviaA2_19071 [Mycobacterium avium subsp. avium ATCC 25291] Length=154 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/128 (54%), Positives = 92/128 (72%), Gaps = 8/128 (6%) Query 5 RHQTLTLRLLAASAG---ILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQ 61 RHQ T+RLLAA+AG + SA A A A+ N D FI ALN+AG+++G+P +A A+G+ Sbjct 2 RHQPFTIRLLAAAAGLLTVASAFAAPAGAEGN--GDDFIDALNHAGIDFGEPGNAMAVGE 59 Query 62 SVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLP-AL 120 SVCP+L++PGG+F +SV R GMS MA+ FT+IAI YCP MA++ASGNL A+ Sbjct 60 SVCPMLSQPGGNFAAVASSVAGR--GMSPTMARMFTTIAIQTYCPQEMANIASGNLSGAM 117 Query 121 PDMPGLPG 128 P +PG+PG Sbjct 118 PQVPGMPG 125 >gi|342861567|ref|ZP_08718214.1| hypothetical protein MCOL_21881 [Mycobacterium colombiense CECT 3035] gi|342131056|gb|EGT84345.1| hypothetical protein MCOL_21881 [Mycobacterium colombiense CECT 3035] Length=178 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/127 (56%), Positives = 97/127 (77%), Gaps = 4/127 (3%) Query 5 RHQTLTLRLLAASAGILS-AAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSV 63 RHQ T+RLLAA+AG+L+ A+AFAAPA AN D FI ALN+AGV++G+P +A ++G+SV Sbjct 2 RHQPFTIRLLAAAAGLLTVASAFAAPAGANGNGDDFIDALNHAGVDFGEPGNAMSVGESV 61 Query 64 CPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLP-ALPD 122 CP+L++PGG+F +SV R GMS MA+ FT+IAI YCP MA++A+GNL A+P Sbjct 62 CPMLSQPGGNFAAVASSVAGR--GMSPTMARMFTTIAIQTYCPEEMANIANGNLSGAMPQ 119 Query 123 MPGLPGS 129 +PG+PG Sbjct 120 VPGMPGQ 126 >gi|333991832|ref|YP_004524446.1| hypothetical protein JDM601_3193 [Mycobacterium sp. JDM601] gi|333487801|gb|AEF37193.1| lipoprotein LprJ [Mycobacterium sp. JDM601] Length=140 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 57/120 (48%), Positives = 76/120 (64%), Gaps = 5/120 (4%) Query 9 LTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILA 68 + L L AG++ AAA PAQA+P+D +F++ L AGV GDP LGQSVCP+L Sbjct 1 MALTGLGICAGLIGAAA---PAQASPIDTSFLSDLAGAGVPVGDPAATAELGQSVCPMLT 57 Query 69 EPGGSFNTAVASVVARAQG--MSQDMAQTFTSIAISMYCPSVMADVASGNLPALPDMPGL 126 EP G+ + + V A G MS +MAQ FT IA+ YCP ++A +ASG LP LP +PG+ Sbjct 58 EPAGTAASVASPVTALGGGPAMSPEMAQLFTEIAVQAYCPQMLAQLASGQLPELPQIPGM 117 >gi|296168837|ref|ZP_06850510.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896496|gb|EFG76145.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=177 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/98 (57%), Positives = 74/98 (76%), Gaps = 4/98 (4%) Query 33 NPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAVASVVARAQGMSQDM 92 NP DD FI ALN+AG+++G+P +A ++GQS+CP+LAEPGG+F A +SV R GMS M Sbjct 45 NP-DDNFIDALNHAGIDFGEPGNAMSVGQSICPMLAEPGGNFAAAASSVSGR--GMSPMM 101 Query 93 AQTFTSIAISMYCPSVMADVASGNLP-ALPDMPGLPGS 129 A+ FT+IAI YCP MA++ASGNL A+P +PG+ G Sbjct 102 ARMFTTIAIQTYCPEQMANLASGNLSGAVPQLPGMAGQ 139 >gi|342860732|ref|ZP_08717382.1| LprJ [Mycobacterium colombiense CECT 3035] gi|342131756|gb|EGT85013.1| LprJ [Mycobacterium colombiense CECT 3035] Length=120 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/115 (47%), Positives = 77/115 (67%), Gaps = 3/115 (2%) Query 5 RHQTLTLRLLAASAGILS-AAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSV 63 R + L ++ G++S AA +AP +A+ V +AF++AL NAG+ Y P A A+G+SV Sbjct 6 RVRWTVLPIVGVITGLVSLAAVLSAPIRADIVGNAFLSALTNAGITYTQPASATAMGESV 65 Query 64 CPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLP 118 CP+L EPGGSF+ VAS +A G+S +MA FT +AI+ YCP+V+A + GN P Sbjct 66 CPMLFEPGGSFDE-VASRMAEGNGLSYEMAGKFTIVAIATYCPAVIAPLL-GNRP 118 >gi|254821548|ref|ZP_05226549.1| LprJ [Mycobacterium intracellulare ATCC 13950] Length=124 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/120 (43%), Positives = 76/120 (64%), Gaps = 6/120 (5%) Query 5 RHQTLTLRLLAASAGILSAAA-----FAAPAQANPVDDAFIAALNNAGVNYGDPVDAKAL 59 R ++ LR L G+++ AA +AP +A+ + +AF++AL NAG+ Y P A+ Sbjct 6 RVRSTVLRSLGVITGLVALAAALSGAMSAPIRADMLSNAFLSALTNAGIAYSQPTGTTAM 65 Query 60 GQSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPA 119 GQSVCP+L EPGGSF+ AV S +A GMS + A FT +AI+ YCP+++A + LP+ Sbjct 66 GQSVCPMLFEPGGSFD-AVTSKMAEGNGMSYETAGRFTIVAIATYCPALIAPLLGNRLPS 124 >gi|15608828|ref|NP_216206.1| lipoprotein LprJ [Mycobacterium tuberculosis H37Rv] gi|15841147|ref|NP_336184.1| hypothetical protein MT1729 [Mycobacterium tuberculosis CDC1551] gi|121637597|ref|YP_977820.1| putative lipoprotein lprJ [Mycobacterium bovis BCG str. Pasteur 1173P2] 77 more sequence titles Length=127 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 54/115 (47%), Positives = 72/115 (63%), Gaps = 3/115 (2%) Query 5 RHQTLTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVC 64 R T L LLA G AA+ AAP QA+ + +AF+ AL NAG+ Y P ALG+SVC Sbjct 16 RQATTLLALLAGVFG--GAASCAAPIQADMMGNAFLTALTNAGIAYDQPATTVALGRSVC 73 Query 65 PILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPA 119 P++ PGG+F + + S +A GMS+DMA TFT +AI YCP+V+A + L A Sbjct 74 PMVVAPGGTFES-ITSRMAEINGMSRDMASTFTIVAIGTYCPAVIAPLMPNRLQA 127 >gi|31792876|ref|NP_855369.1| lipoprotein LprJ [Mycobacterium bovis AF2122/97] gi|31618466|emb|CAD96384.1| PROBABLE LIPOPROTEIN LPRJ [Mycobacterium bovis AF2122/97] Length=139 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 54/115 (47%), Positives = 72/115 (63%), Gaps = 3/115 (2%) Query 5 RHQTLTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVC 64 R T L LLA G AA+ AAP QA+ + +AF+ AL NAG+ Y P ALG+SVC Sbjct 28 RQATTLLALLAGVFG--GAASCAAPIQADMMGNAFLTALTNAGIAYDQPATTVALGRSVC 85 Query 65 PILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPA 119 P++ PGG+F ++ S +A GMS+DMA TFT +AI YCP+V+A + L A Sbjct 86 PMVVAPGGTFE-SITSRMAEINGMSRDMASTFTIVAIGTYCPAVIAPLMPNRLQA 139 >gi|118617307|ref|YP_905639.1| lipoprotein, LprJ [Mycobacterium ulcerans Agy99] gi|118569417|gb|ABL04168.1| lipoprotein, LprJ [Mycobacterium ulcerans Agy99] Length=129 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/102 (49%), Positives = 70/102 (69%), Gaps = 2/102 (1%) Query 9 LTLRLLAASAGILS-AAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPIL 67 L LR LA +AG+ +AA AAP A+ + +AF+ ALNNAG++Y P A A+G+SVCP+ Sbjct 19 LALRFLALTAGVFGVSAAVAAPIHADMMGNAFLTALNNAGISYSQPAAAMAMGRSVCPMA 78 Query 68 AEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVM 109 EP G+F + VA +V + GM ++ A FT IAI+ YCP+V+ Sbjct 79 VEPNGTFESVVARMVDK-NGMPRETAAAFTVIAIATYCPAVI 119 >gi|183982510|ref|YP_001850801.1| lipoprotein, LprJ [Mycobacterium marinum M] gi|183175836|gb|ACC40946.1| lipoprotein, LprJ [Mycobacterium marinum M] Length=129 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/102 (48%), Positives = 70/102 (69%), Gaps = 2/102 (1%) Query 9 LTLRLLAASAGILS-AAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPIL 67 L LR LA +AG+ +AA AAP A+ + +AF+ ALNNAG++Y P A A+G+SVCP+ Sbjct 19 LALRFLALTAGVFGVSAAVAAPIHADMMGNAFLTALNNAGISYSQPAAAMAMGRSVCPMA 78 Query 68 AEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVM 109 EP G+F + VA +V + GM ++ A FT +AI+ YCP+V+ Sbjct 79 VEPNGTFESVVARMVDK-NGMPRETAAAFTVVAIATYCPAVI 119 >gi|339294645|gb|AEJ46756.1| lipoprotein LprJ [Mycobacterium tuberculosis CCDC5079] Length=107 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 51/108 (48%), Positives = 71/108 (66%), Gaps = 2/108 (1%) Query 13 LLAASAGILS-AAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPG 71 +LA AG+ AA+ AAP QA+ + +AF+ AL NAG+ Y P ALG+SVCP++ PG Sbjct 1 MLALLAGVFGGAASCAAPIQADMMGNAFLTALTNAGIAYDQPATTVALGRSVCPMVVAPG 60 Query 72 GSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPA 119 G+F + + S +A GMS+DMA TFT +AI YCP+V+A + L A Sbjct 61 GTFES-ITSRMAEINGMSRDMASTFTIVAIGTYCPAVIAPLMPNRLQA 107 >gi|118470116|ref|YP_888950.1| hypothetical protein MSMEG_4689 [Mycobacterium smegmatis str. MC2 155] gi|118171403|gb|ABK72299.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=134 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/101 (49%), Positives = 63/101 (63%), Gaps = 1/101 (0%) Query 27 AAP-AQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAVASVVARA 85 AAP A NPVD +F+ ALNNAGV Y DP A LGQ VCP+L EPG +F + V + Sbjct 29 AAPGAPGNPVDRSFLTALNNAGVGYADPDAAVRLGQDVCPMLVEPGKNFASVVTKLRGDR 88 Query 86 QGMSQDMAQTFTSIAISMYCPSVMADVASGNLPALPDMPGL 126 +S D+A F IAISMYCP +++ + G L + +PGL Sbjct 89 SVVSPDVAAFFAGIAISMYCPQMISGIGDGTLLRMLAVPGL 129 >gi|41407495|ref|NP_960331.1| LprJ [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395848|gb|AAS03714.1| LprJ [Mycobacterium avium subsp. paratuberculosis K-10] Length=122 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/97 (51%), Positives = 65/97 (68%), Gaps = 6/97 (6%) Query 14 LAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGS 73 LAA AG LSA P +A+ + +AF++AL NAG+ Y P A+GQSVCP+L EPGGS Sbjct 23 LAALAGTLSA-----PIRADMLGNAFLSALTNAGIAYTQPTSTMAMGQSVCPMLFEPGGS 77 Query 74 FNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMA 110 F+ A + RA GMS + A FT +AI+ YCP+V+A Sbjct 78 FDAVTADMAQRA-GMSYETAGRFTIVAIATYCPAVIA 113 >gi|336457849|gb|EGO36843.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp. paratuberculosis S397] Length=119 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/104 (49%), Positives = 67/104 (65%), Gaps = 6/104 (5%) Query 14 LAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGS 73 LAA AG LSA P +A+ + +AF++AL NAG+ Y P A+GQSVCP+L EPGGS Sbjct 20 LAALAGTLSA-----PIRADMLGNAFLSALTNAGIAYTQPTSTMAMGQSVCPMLFEPGGS 74 Query 74 FNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNL 117 F+ A + RA GMS + A FT +AI+ YCP+V+A + L Sbjct 75 FDAVTADMAQRA-GMSYETAGRFTIVAIATYCPAVIAPLLGNRL 117 >gi|254775533|ref|ZP_05217049.1| LprJ protein [Mycobacterium avium subsp. avium ATCC 25291] Length=122 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 48/105 (46%), Positives = 70/105 (67%), Gaps = 6/105 (5%) Query 11 LRLLAASAGILS-----AAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCP 65 +RL + G+L+ A +AP +A+ + +AF++AL NAG+ Y P A+GQSVCP Sbjct 10 VRLTGLTVGVLAGLAALAGTLSAPIRADMLGNAFLSALTNAGIAYTQPTSTMAMGQSVCP 69 Query 66 ILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMA 110 L EPGGSF+ AVA+ +A+ GMS + A FT +AI+ YCP+V+A Sbjct 70 RLFEPGGSFD-AVAADMAQRAGMSYETAGRFTIVAIATYCPAVIA 113 >gi|118465764|ref|YP_882265.1| LprJ protein [Mycobacterium avium 104] gi|118167051|gb|ABK67948.1| LprJ protein [Mycobacterium avium 104] Length=122 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 50/97 (52%), Positives = 67/97 (70%), Gaps = 6/97 (6%) Query 14 LAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGS 73 LAA AG LSA P +A+ + +AF++AL NAG+ Y P A+GQSVCP L EPGGS Sbjct 23 LAALAGTLSA-----PIRADMLGNAFLSALTNAGIAYTQPTSTMAMGQSVCPRLFEPGGS 77 Query 74 FNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMA 110 F+ AVA+ +A+ GMS + A FT +AI+ YCP+V+A Sbjct 78 FD-AVAADMAQRAGMSYETAGRFTIVAIATYCPAVIA 113 >gi|240170139|ref|ZP_04748798.1| lipoprotein, LprJ [Mycobacterium kansasii ATCC 12478] Length=135 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/87 (49%), Positives = 60/87 (69%), Gaps = 1/87 (1%) Query 23 AAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAVASVV 82 +A AAP A+ + +AF+ ALNNAG++YG P A A+G+SVCP+ +P G+F + VA + Sbjct 40 SATMAAPTHADMMGNAFLTALNNAGISYGQPAAAMAIGRSVCPMAVQPDGTFESVVAR-M 98 Query 83 ARAQGMSQDMAQTFTSIAISMYCPSVM 109 A GMS D A FT +AI+ YCP+V+ Sbjct 99 AEDNGMSHDAAAAFTIVAIATYCPAVI 125 >gi|108800570|ref|YP_640767.1| hypothetical protein Mmcs_3604 [Mycobacterium sp. MCS] gi|119869709|ref|YP_939661.1| hypothetical protein Mkms_3677 [Mycobacterium sp. KMS] gi|126436186|ref|YP_001071877.1| hypothetical protein Mjls_3609 [Mycobacterium sp. JLS] gi|108770989|gb|ABG09711.1| protein of unknown function DUF732 [Mycobacterium sp. MCS] gi|119695798|gb|ABL92871.1| protein of unknown function DUF732 [Mycobacterium sp. KMS] gi|126235986|gb|ABN99386.1| protein of unknown function DUF732 [Mycobacterium sp. JLS] Length=126 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 39/79 (50%), Positives = 51/79 (65%), Gaps = 2/79 (2%) Query 39 FIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTS 98 F++ALN AGV Y +PVD ALG+ VCP+L EPG F VA+V R G+ D+A F Sbjct 37 FLSALNRAGVRYDNPVDTVALGKRVCPMLVEPGKDFAKVVATV--RNDGVPPDLAAFFAG 94 Query 99 IAISMYCPSVMADVASGNL 117 IAI MYCP +++ V +G Sbjct 95 IAIQMYCPQMVSSVGNGTF 113 >gi|296164589|ref|ZP_06847157.1| LprJ protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900069|gb|EFG79507.1| LprJ protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=127 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 50/120 (42%), Positives = 74/120 (62%), Gaps = 2/120 (1%) Query 1 MNLRRHQTLTLRLLAASAGILSAAAFAAP-AQANPVDDAFIAALNNAGVNYGDPVDAKAL 59 ++LRR + LR+L SA + AA A +A+ +AF+ AL NAGV+Y P A AL Sbjct 8 ISLRRAEWALLRVLGVSACVAGLAAPLAAPVRADMRGNAFLMALTNAGVSYPHPAGALAL 67 Query 60 GQSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPA 119 GQSVCP+L EPG SF++ A + R+ G+ + A FT +A++ +CP+V+A + L A Sbjct 68 GQSVCPMLVEPGQSFDSVAAEMEQRS-GLGYESAGLFTIVAVANFCPAVIAPLLQNRLTA 126 >gi|118466065|ref|YP_882736.1| hypothetical protein MAV_3558 [Mycobacterium avium 104] gi|118167352|gb|ABK68249.1| conserved hypothetical protein [Mycobacterium avium 104] Length=122 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/125 (37%), Positives = 69/125 (56%), Gaps = 8/125 (6%) Query 1 MNLRRHQTLTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALG 60 M + H+ + L L+ A G + A PA+A+ DDAF+A+L+ AG+ YGD A G Sbjct 1 MLCKNHRFMKLFLIVA--GFAAVIGLAVPARADSTDDAFVASLDKAGIKYGDADKAAGAG 58 Query 61 QSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPAL 120 + VC L + G + V+++ ++ +S D A TF +IA++ YCP D AS PA Sbjct 59 KWVCTTL-QGGKQMSDVVSTLQSKNSNLSDDHANTFAAIAVNAYCP----DQASSITPAS 113 Query 121 P-DMP 124 P D P Sbjct 114 PTDTP 118 >gi|118471785|ref|YP_887985.1| hypothetical protein MSMEG_3681 [Mycobacterium smegmatis str. MC2 155] gi|118173072|gb|ABK73968.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=138 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/92 (48%), Positives = 57/92 (62%), Gaps = 1/92 (1%) Query 30 AQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAVASVVARAQGMS 89 A P D AF+ AL AGVN DP A A+G++VCP+LAE G S VAS VA GM Sbjct 38 APGAPTDQAFVDALGQAGVNAVDPAQAAAMGEAVCPMLAEQGQS-AADVASTVADTGGMP 96 Query 90 QDMAQTFTSIAISMYCPSVMADVASGNLPALP 121 A FT IA+SM+CP++++ ++ G P LP Sbjct 97 LGPATMFTGIAVSMFCPAMVSRLSQGVPPDLP 128 >gi|41408884|ref|NP_961720.1| hypothetical protein MAP2786c [Mycobacterium avium subsp. paratuberculosis K-10] gi|254776000|ref|ZP_05217516.1| hypothetical protein MaviaA2_15210 [Mycobacterium avium subsp. avium ATCC 25291] gi|41397243|gb|AAS05103.1| hypothetical protein MAP_2786c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458835|gb|EGO37792.1| Protein of unknown function (DUF732) [Mycobacterium avium subsp. paratuberculosis S397] Length=114 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 56/96 (59%), Gaps = 1/96 (1%) Query 11 LRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEP 70 ++L AG + A PA+A+ DDAF+A+L+ AG+ YGD A G+ VC L + Sbjct 1 MKLFLIVAGFAAVIGLAVPARADSTDDAFVASLDKAGIKYGDADKAAGAGKWVCTTL-QG 59 Query 71 GGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCP 106 G + V+++ ++ +S D A TF +IA++ YCP Sbjct 60 GKQMSDVVSTLQSKNSNLSDDHANTFAAIAVNAYCP 95 >gi|296171947|ref|ZP_06852992.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295893880|gb|EFG73652.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=130 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/102 (39%), Positives = 61/102 (60%), Gaps = 3/102 (2%) Query 9 LTLRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILA 68 + ++L+ AG+++ A A PA A+ DDAF+ +LN+AG Y DP G VC A Sbjct 19 VVMKLVLTIAGVVAGIALAVPAHADDTDDAFLGSLNSAGFTYNDPGQVIQAGHYVCS--A 76 Query 69 EPGGSFNTAVAS-VVARAQGMSQDMAQTFTSIAISMYCPSVM 109 GG+ +A+ +V++A +SQ+ A+ FT+IA S YCP + Sbjct 77 AGGGTAMADIATAMVSKAPALSQEKAEKFTAIAASAYCPDAI 118 >gi|315443272|ref|YP_004076151.1| hypothetical protein Mspyr1_16490 [Mycobacterium sp. Spyr1] gi|315261575|gb|ADT98316.1| Protein of unknown function (DUF732) [Mycobacterium sp. Spyr1] Length=117 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/90 (43%), Positives = 53/90 (59%), Gaps = 3/90 (3%) Query 27 AAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTA-VASVVARA 85 A PA A+P DAFI+ L + + DP A +GQ+VCP+L+EPG N A VA+ V+ A Sbjct 23 APPAHADPATDAFISTLQHYRLGDIDPATAVRVGQTVCPMLSEPGQ--NAANVAADVSEA 80 Query 86 QGMSQDMAQTFTSIAISMYCPSVMADVASG 115 G A FT +AIS++CP + + G Sbjct 81 LGRPLGPATMFTGLAISIFCPRAVDAMTDG 110 >gi|145222805|ref|YP_001133483.1| hypothetical protein Mflv_2217 [Mycobacterium gilvum PYR-GCK] gi|145215291|gb|ABP44695.1| protein of unknown function DUF732 [Mycobacterium gilvum PYR-GCK] Length=115 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 38/90 (43%), Positives = 53/90 (59%), Gaps = 3/90 (3%) Query 27 AAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTA-VASVVARA 85 A PA A+P DAFI+ L + + DP A +GQ+VCP+L+EPG N A VA+ V+ A Sbjct 21 APPAHADPATDAFISTLQHYRLGDIDPATAVRVGQTVCPMLSEPGQ--NAANVAADVSEA 78 Query 86 QGMSQDMAQTFTSIAISMYCPSVMADVASG 115 G A FT +AIS++CP + + G Sbjct 79 LGRPLGPATMFTGLAISIFCPRAVDAMTDG 108 >gi|108800938|ref|YP_641135.1| hypothetical protein Mmcs_3974 [Mycobacterium sp. MCS] gi|119870078|ref|YP_940030.1| hypothetical protein Mkms_4048 [Mycobacterium sp. KMS] gi|126436563|ref|YP_001072254.1| hypothetical protein Mjls_3988 [Mycobacterium sp. JLS] gi|108771357|gb|ABG10079.1| protein of unknown function DUF732 [Mycobacterium sp. MCS] gi|119696167|gb|ABL93240.1| protein of unknown function DUF732 [Mycobacterium sp. KMS] gi|126236363|gb|ABN99763.1| protein of unknown function DUF732 [Mycobacterium sp. JLS] Length=122 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 49/125 (40%), Positives = 68/125 (55%), Gaps = 4/125 (3%) Query 3 LRRHQTLTLRLLAASAGILSAAAFA-APAQANPVDDAFIAALNNAGVNYGDPVDAKALGQ 61 ++R + LAAS I SA + A A+ D F++AL +GV D A +GQ Sbjct 1 MKRFHRAAVASLAASGLIGSAMSLGTGSAGADTATDMFLSALAGSGVTGVDTATAVRVGQ 60 Query 62 SVCPILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPALP 121 SVCP+LAEPG + VA+ V+ G A FT +AI ++CP +A +A G P LP Sbjct 61 SVCPMLAEPGQNVAN-VAADVSDMIGRPLGPATMFTGLAIQVFCPGAVAALAYGKSP-LP 118 Query 122 DMPGL 126 +PGL Sbjct 119 -LPGL 122 >gi|120405430|ref|YP_955259.1| hypothetical protein Mvan_4478 [Mycobacterium vanbaalenii PYR-1] gi|119958248|gb|ABM15253.1| protein of unknown function DUF732 [Mycobacterium vanbaalenii PYR-1] Length=117 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/87 (44%), Positives = 52/87 (60%), Gaps = 1/87 (1%) Query 29 PAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAVASVVARAQGM 88 PAQA+P DAFIA L + + DP A +GQ+VCP+L+EP G VA+ VA A G Sbjct 25 PAQADPTTDAFIATLQHYRLGDIDPATAMRVGQTVCPMLSEP-GQNAANVAADVADALGR 83 Query 89 SQDMAQTFTSIAISMYCPSVMADVASG 115 A FT +AIS++CP ++ + G Sbjct 84 PLGPATMFTGLAISIFCPRAVSAMTDG 110 >gi|342861294|ref|ZP_08717942.1| hypothetical protein MCOL_20521 [Mycobacterium colombiense CECT 3035] gi|342131194|gb|EGT84475.1| hypothetical protein MCOL_20521 [Mycobacterium colombiense CECT 3035] Length=111 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 40/111 (37%), Positives = 53/111 (48%), Gaps = 1/111 (0%) Query 11 LRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEP 70 +R L AG ++ A A PA A+ DDAF+AALN AG+ Y +P A GQ VC LA Sbjct 1 MRFLPFLAGAVAFAGLALPAHADSDDDAFLAALNKAGITYQNPDRAIKAGQKVCD-LANS 59 Query 71 GGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPALP 121 G + + V + A F A S+YCP ++ G P P Sbjct 60 GTTELDIIRDVHDLNPAFTTAKAALFVQAAASVYCPDRLSAGDGGTNPRTP 110 >gi|342858463|ref|ZP_08715118.1| hypothetical protein MCOL_06296 [Mycobacterium colombiense CECT 3035] gi|342134167|gb|EGT87347.1| hypothetical protein MCOL_06296 [Mycobacterium colombiense CECT 3035] Length=115 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/95 (33%), Positives = 55/95 (58%), Gaps = 2/95 (2%) Query 33 NPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAVASVVARAQGMSQDM 92 + DD+FIA+L+ AG+++ DP A G+ VC + + G V +++++ +S+D Sbjct 23 DATDDSFIASLHAAGISFSDPGKAVGAGKWVCDSVGQ-GTQMPDVVKTLMSKNSALSEDK 81 Query 93 AQTFTSIAISMYCPSVMADVASGNLPALPDMPGLP 127 A F +IA + YCPS +A ++ + P+ P P P Sbjct 82 ANQFAAIAATTYCPSAVA-TSTPSTPSAPSAPEAP 115 >gi|118618631|ref|YP_906963.1| hypothetical protein MUL_3300 [Mycobacterium ulcerans Agy99] gi|183982063|ref|YP_001850354.1| hypothetical protein MMAR_2049 [Mycobacterium marinum M] gi|118570741|gb|ABL05492.1| conserved secreted protein [Mycobacterium ulcerans Agy99] gi|183175389|gb|ACC40499.1| conserved secreted protein [Mycobacterium marinum M] Length=107 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 1/100 (1%) Query 11 LRLLAASAGILSAAAFAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEP 70 ++LL G+ AAPA A+ DDAF+ AL AG+ Y D A A + +C + Sbjct 1 MKLLVGVTGLAVMVGLAAPAHADANDDAFLVALGKAGITYPDAARAIAAAKWICQQV-NN 59 Query 71 GGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMA 110 G V V + G+ +D A FT+IA + YCP++++ Sbjct 60 GTQTVDVVKQVQSSNSGLQEDGAAKFTAIAANAYCPAILS 99 >gi|254818543|ref|ZP_05223544.1| hypothetical protein MintA_01396 [Mycobacterium intracellulare ATCC 13950] Length=111 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/102 (33%), Positives = 54/102 (53%), Gaps = 7/102 (6%) Query 11 LRLLAASAGILSAAAFAAPAQANPVD------DAFIAALNNAGVNYGDPVDAKALGQSVC 64 ++L+ A +G+ A PA A+PVD +AFIA+L AG+ + D A G+ VC Sbjct 1 MKLMLALSGLAVTIGLAVPAHADPVDGVDGTDEAFIASLRAAGITFADSDKAVGAGKWVC 60 Query 65 PILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCP 106 + + G V +++++ +S+ A F +IA S YCP Sbjct 61 DTVGQ-GTQMPDVVKTLLSKNSALSEGKANQFAAIAASTYCP 101 >gi|254776404|ref|ZP_05217920.1| hypothetical protein MaviaA2_17294 [Mycobacterium avium subsp. avium ATCC 25291] Length=108 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/99 (38%), Positives = 52/99 (53%), Gaps = 6/99 (6%) Query 13 LLAASAGILSAAAFAAPAQANPV-----DDAFIAALNNAGVNYGDPVDAKALGQSVCPIL 67 +LA AG A AAPA A+P D +F+AALN AG+ Y +P A +G+ C ++ Sbjct 1 MLALLAGFAVLAGMAAPAHADPAGTTGSDASFLAALNQAGITYQNPATAIEVGKRACELM 60 Query 68 AEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCP 106 + G + +V + G + D A FT IA S YCP Sbjct 61 -DQGSPQVEVIKNVSSSNPGFTVDGAAQFTMIAASAYCP 98 >gi|333988948|ref|YP_004521562.1| hypothetical protein JDM601_0308 [Mycobacterium sp. JDM601] gi|333484916|gb|AEF34308.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=100 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/83 (41%), Positives = 44/83 (54%), Gaps = 1/83 (1%) Query 26 FAAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAVASVVARA 85 AAPA A P D F+ AL+ G++Y +P DA A GQ+VC +AE G S N A V Sbjct 19 LAAPAAAEPGDAGFLGALDQMGISYPNPADAVAGGQAVCRYIAE-GHSVNQAAKGVKNAN 77 Query 86 QGMSQDMAQTFTSIAISMYCPSV 108 ++ A F IA + YC V Sbjct 78 PSLTLTKASQFVGIARATYCAEV 100 >gi|296164795|ref|ZP_06847355.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899849|gb|EFG79295.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=105 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/104 (34%), Positives = 56/104 (54%), Gaps = 7/104 (6%) Query 11 LRLLAASAGILSAAAFAAPAQANP---VDDA-FIAALNNAGVNYGDPVDAKALGQSVCPI 66 +RLL A G+ + AAPA +P VD+A F+A+L +AG+ Y P A ++VC Sbjct 1 MRLLVAVIGVWAVIGLAAPAHGDPDGGVDEASFLASLRSAGITYKTPDAAVQFAKAVCES 60 Query 67 LAEPGGSFN-TAVASVVARAQGMSQDMAQTFTSIAISMYCPSVM 109 + G + V+ + A+ G++ D A +F +IA YCP + Sbjct 61 MGN--GEYGPQMVSELQAQNPGLTADHATSFLAIAAKFYCPQKL 102 >gi|15841274|ref|NP_336311.1| hypothetical protein MT1854 [Mycobacterium tuberculosis CDC1551] gi|13881502|gb|AAK46125.1| hypothetical protein MT1854 [Mycobacterium tuberculosis CDC1551] Length=122 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/102 (37%), Positives = 53/102 (52%), Gaps = 3/102 (2%) Query 7 QTLTLRLLAASAGILSAAAFAAPAQANPV-DDA-FIAALNNAGVNYGDPVDAKALGQSVC 64 ++L++R+++ I A PA A P DDA F+A+L AG+ Y P A A G++VC Sbjct 11 ESLSMRVVSTLLSIPLMIGLAVPAHAGPSGDDAVFLASLERAGITYSHPDQAIASGKAVC 70 Query 65 PILAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCP 106 L E G S V + R G S D F +I+ +YCP Sbjct 71 A-LVESGESGLQVVNELRTRNPGFSMDGCCKFAAISAHVYCP 111 >gi|342860982|ref|ZP_08717631.1| hypothetical protein MCOL_18962 [Mycobacterium colombiense CECT 3035] gi|342131426|gb|EGT84696.1| hypothetical protein MCOL_18962 [Mycobacterium colombiense CECT 3035] Length=131 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/71 (43%), Positives = 40/71 (57%), Gaps = 1/71 (1%) Query 36 DDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAVASVVARAQGMSQDMAQT 95 D +FIAALN AG+ Y DP A +G+ C ++ E G + SV + G ++D A Sbjct 29 DASFIAALNQAGITYQDPAAAVGVGKRACQLMDE-GSPQVEVIKSVSSSNPGFTEDGAAQ 87 Query 96 FTSIAISMYCP 106 FT IA S YCP Sbjct 88 FTMIAASAYCP 98 >gi|254823260|ref|ZP_05228261.1| hypothetical protein MintA_25244 [Mycobacterium intracellulare ATCC 13950] Length=107 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/111 (38%), Positives = 54/111 (49%), Gaps = 15/111 (13%) Query 8 TLTLRLLAASAGILSAAAFAAPAQANP------VDDAFIAALNNAGVNYGDPVDAKALGQ 61 T L LL+A A I AAPA A+P D FIAAL AG ++ P A A G+ Sbjct 2 TRLLALLSAFATI----GLAAPAHADPGPEPGADDGGFIAALRQAGFSFATPGSAVAAGR 57 Query 62 SVCPIL--AEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMA 110 +VC L EPG V V R GM +MA F ++ YCP+ ++ Sbjct 58 AVCSCLDNGEPG---LEVVHDVKTRNPGMDMEMASNFAVLSAKFYCPNQLS 105 >gi|296169915|ref|ZP_06851526.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895427|gb|EFG75130.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=135 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/110 (35%), Positives = 55/110 (50%), Gaps = 11/110 (10%) Query 20 ILSAAAF-AAPAQANPVDDAFIAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAV 78 +L+A +F +A A A+P DDAFIA+L N G+ D A A+G VC G N A Sbjct 30 LLAAVSFWSATASADPADDAFIASLANYGIEVRDSGIAIAMGHRVCK------GFDNNAN 83 Query 79 ASVVA----RAQGMSQDMAQTFTSIAISMYCPSVMADVASGNLPALPDMP 124 ASV+A R +S A F ++++ YCP + + +P P Sbjct 84 ASVLAMKVKRDTDLSMKEASYFVGLSVAAYCPQYRGQIDRSLIWLIPGPP 133 >gi|289554423|ref|ZP_06443633.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289439055|gb|EFD21548.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] Length=110 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 3/100 (3%) Query 9 LTLRLLAASAGILSAAAFAAPAQANPV-DDA-FIAALNNAGVNYGDPVDAKALGQSVCPI 66 +++R+++ I A PA A P DDA F+A+L AG+ Y P A A G++VC Sbjct 1 MSMRVVSTLLSIPLMIGLAVPAHAGPSGDDAVFLASLERAGITYSHPDQAIASGKAVCA- 59 Query 67 LAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCP 106 L E G S V + R G S D F +I+ +YCP Sbjct 60 LVESGESGLQVVNELRTRNPGFSMDGCCKFAAISAHVYCP 99 Lambda K H 0.317 0.129 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 128283502052 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40