BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3357
Length=91
Score E
Sequences producing significant alignments: (Bits) Value
gi|326327906|pdb|3OEI|A Chain A, Crystal Structure Of Mycobacter... 187 4e-46
gi|15610493|ref|NP_217874.1| hypothetical protein Rv3357 [Mycoba... 187 5e-46
gi|289571594|ref|ZP_06451821.1| conserved hypothetical protein [... 186 1e-45
gi|326327910|pdb|3OEI|E Chain E, Crystal Structure Of Mycobacter... 185 2e-45
gi|289752066|ref|ZP_06511444.1| conserved hypothetical protein [... 178 2e-43
gi|240171145|ref|ZP_04749804.1| prevent-host-death family protei... 156 8e-37
gi|254386626|ref|ZP_05001923.1| conserved hypothetical protein [... 150 4e-35
gi|108802445|ref|YP_642641.1| prevent-host-death protein [Mycoba... 149 1e-34
gi|302534753|ref|ZP_07287095.1| prevent-host-death protein [Stre... 137 4e-31
gi|294629730|ref|ZP_06708290.1| PHD family toxin-antitoxin syste... 134 6e-30
gi|21220706|ref|NP_626485.1| hypothetical protein SCO2235 [Strep... 110 1e-22
gi|302545612|ref|ZP_07297954.1| PHD family toxin-antitoxin syste... 107 4e-22
gi|302545635|ref|ZP_07297977.1| PHD family toxin-antitoxin syste... 105 2e-21
gi|256832886|ref|YP_003161613.1| prevent-host-death family prote... 103 8e-21
gi|289705294|ref|ZP_06501693.1| toxin-antitoxin system, antitoxi... 100 6e-20
gi|86741247|ref|YP_481647.1| prevent-host-death protein [Frankia... 94.0 6e-18
gi|302535097|ref|ZP_07287439.1| prevent-host-death protein [Stre... 90.5 8e-17
gi|336178420|ref|YP_004583795.1| prevent-host-death family prote... 89.4 2e-16
gi|29829748|ref|NP_824382.1| hypothetical protein SAV_3206 [Stre... 88.2 4e-16
gi|15077435|gb|AAK83162.1|AF333038_2 AviX2 [Streptomyces viridoc... 79.3 2e-13
gi|343521716|ref|ZP_08758682.1| prevent-host-death family protei... 74.7 4e-12
gi|253700911|ref|YP_003022100.1| prevent-host-death family prote... 73.9 7e-12
gi|283852875|ref|ZP_06370136.1| prevent-host-death family protei... 73.9 8e-12
gi|149377191|ref|ZP_01894939.1| hypothetical protein MDG893_1602... 73.6 9e-12
gi|197118310|ref|YP_002138737.1| antitoxin YefM, prevent-host-de... 72.4 2e-11
gi|326773841|ref|ZP_08233123.1| toxin-antitoxin system, antitoxi... 71.2 5e-11
gi|300115367|ref|YP_003761942.1| prevent-host-death family prote... 71.2 5e-11
gi|324016968|gb|EGB86187.1| toxin-antitoxin system, antitoxin co... 70.9 6e-11
gi|227887067|ref|ZP_04004872.1| prevent-host-death family protei... 70.9 6e-11
gi|117624221|ref|YP_853134.1| antitoxin YefM [Escherichia coli A... 70.9 6e-11
gi|308271728|emb|CBX28336.1| Antitoxin yefM [uncultured Desulfob... 70.5 7e-11
gi|126659704|ref|ZP_01730833.1| Antitoxin of toxin-antitoxin sys... 70.5 8e-11
gi|74312560|ref|YP_310979.1| antitoxin YefM [Shigella sonnei Ss0... 70.5 8e-11
gi|345388433|gb|EGX18244.1| prevent-host-death family protein [E... 70.5 9e-11
gi|75766064|pdb|2A6Q|A Chain A, Crystal Structure Of Yefm-Yoeb C... 70.1 1e-10
gi|338769917|gb|EGP24689.1| Antitoxin yefM [Escherichia coli PCN... 70.1 1e-10
gi|304398753|ref|ZP_07380624.1| prevent-host-death family protei... 70.1 1e-10
gi|332707577|ref|ZP_08427611.1| PhdYefM prevent-host-death famil... 69.7 1e-10
gi|50119395|ref|YP_048562.1| antitoxin YefM [Pectobacterium atro... 69.7 1e-10
gi|121997213|ref|YP_001002000.1| prevent-host-death family prote... 69.7 1e-10
gi|24113402|ref|NP_707912.1| antitoxin YefM [Shigella flexneri 2... 69.7 2e-10
gi|345432680|dbj|BAK69010.1| antitoxin of the YoeB-YefM toxin-an... 69.3 2e-10
gi|320193305|gb|EFW67943.1| prevent-host-death family protein [E... 69.3 2e-10
gi|335419376|ref|ZP_08550429.1| prevent-host-death family protei... 68.9 2e-10
gi|121997585|ref|YP_001002372.1| prevent-host-death family prote... 68.6 3e-10
gi|67924642|ref|ZP_00518053.1| Prevent-host-death protein [Croco... 68.2 3e-10
gi|238898229|ref|YP_002923910.1| addiction module antitoxin [Can... 68.2 4e-10
gi|222033788|emb|CAP76529.1| Antitoxin yefM [Escherichia coli LF... 68.2 4e-10
gi|301061182|ref|ZP_07201971.1| toxin-antitoxin system, antitoxi... 68.2 4e-10
gi|126665068|ref|ZP_01736051.1| hypothetical protein MELB17_1840... 67.8 5e-10
>gi|326327906|pdb|3OEI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
gi|326327907|pdb|3OEI|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
gi|326327914|pdb|3OEI|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
gi|326327915|pdb|3OEI|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
gi|326327918|pdb|3OEI|M Chain M, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
gi|326327919|pdb|3OEI|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
Length=98
Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/91 (100%), Positives = 91/91 (100%), Gaps = 0/91 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR
Sbjct 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
Query 61 RLMEAVARDKAGHSAFTKSVDELREMAGGEE 91
RLMEAVARDKAGHSAFTKSVDELREMAGGEE
Sbjct 61 RLMEAVARDKAGHSAFTKSVDELREMAGGEE 91
>gi|15610493|ref|NP_217874.1| hypothetical protein Rv3357 [Mycobacterium tuberculosis H37Rv]
gi|15842953|ref|NP_337990.1| hypothetical protein MT3465 [Mycobacterium tuberculosis CDC1551]
gi|31794540|ref|NP_857033.1| hypothetical protein Mb3392 [Mycobacterium bovis AF2122/97]
85 more sequence titles
Length=91
Score = 187 bits (475), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/91 (100%), Positives = 91/91 (100%), Gaps = 0/91 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR
Sbjct 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
Query 61 RLMEAVARDKAGHSAFTKSVDELREMAGGEE 91
RLMEAVARDKAGHSAFTKSVDELREMAGGEE
Sbjct 61 RLMEAVARDKAGHSAFTKSVDELREMAGGEE 91
>gi|289571594|ref|ZP_06451821.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289545348|gb|EFD48996.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=91
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/91 (99%), Positives = 91/91 (100%), Gaps = 0/91 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
M+ISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR
Sbjct 1 MNISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
Query 61 RLMEAVARDKAGHSAFTKSVDELREMAGGEE 91
RLMEAVARDKAGHSAFTKSVDELREMAGGEE
Sbjct 61 RLMEAVARDKAGHSAFTKSVDELREMAGGEE 91
>gi|326327910|pdb|3OEI|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
gi|326327911|pdb|3OEI|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
Length=98
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/91 (99%), Positives = 90/91 (99%), Gaps = 0/91 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR
Sbjct 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
Query 61 RLMEAVARDKAGHSAFTKSVDELREMAGGEE 91
RLMEAVARD AGHSAFTKSVDELREMAGGEE
Sbjct 61 RLMEAVARDXAGHSAFTKSVDELREMAGGEE 91
>gi|289752066|ref|ZP_06511444.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289692653|gb|EFD60082.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=91
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/91 (97%), Positives = 88/91 (97%), Gaps = 0/91 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MSISASEARQRL LIEQVNTDHQ VRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR
Sbjct 1 MSISASEARQRLVSLIEQVNTDHQLVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
Query 61 RLMEAVARDKAGHSAFTKSVDELREMAGGEE 91
RLMEAVARDKAGHSAFTKSVDELREMAGGEE
Sbjct 61 RLMEAVARDKAGHSAFTKSVDELREMAGGEE 91
>gi|240171145|ref|ZP_04749804.1| prevent-host-death family protein [Mycobacterium kansasii ATCC
12478]
gi|296165398|ref|ZP_06847939.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899289|gb|EFG78754.1| prevent-host-death family antitoxin [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=94
Score = 156 bits (395), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/94 (81%), Positives = 85/94 (91%), Gaps = 3/94 (3%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
M+ISASEARQRLFPL+EQVNTDH+PVRITS+AGDAVLMSA DYD+WQETVYLLRSPENAR
Sbjct 1 MAISASEARQRLFPLLEQVNTDHEPVRITSKAGDAVLMSAADYDSWQETVYLLRSPENAR 60
Query 61 RLMEAVARDKAGH---SAFTKSVDELREMAGGEE 91
RLMEAVARD A ++TKS+DEL EMAGG+E
Sbjct 61 RLMEAVARDNATRPTPGSYTKSIDELEEMAGGQE 94
>gi|254386626|ref|ZP_05001923.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194345468|gb|EDX26434.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=91
Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/91 (81%), Positives = 81/91 (90%), Gaps = 0/91 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MSISASEAR LFPLIE+VNTDH PVRITS+ GDAVLMSADDYD+WQETVYLLRSP NA+
Sbjct 1 MSISASEARATLFPLIERVNTDHDPVRITSKNGDAVLMSADDYDSWQETVYLLRSPANAQ 60
Query 61 RLMEAVARDKAGHSAFTKSVDELREMAGGEE 91
RLMEAVARD+ G A TKS++ELR +AGGEE
Sbjct 61 RLMEAVARDREGAPAVTKSMEELRRLAGGEE 91
>gi|108802445|ref|YP_642641.1| prevent-host-death protein [Mycobacterium sp. MCS]
gi|119855271|ref|YP_935874.1| prevent-host-death family protein [Mycobacterium sp. KMS]
gi|108772864|gb|ABG11585.1| Prevent-host-death protein [Mycobacterium sp. MCS]
gi|119697988|gb|ABL95059.1| prevent-host-death family protein [Mycobacterium sp. KMS]
Length=94
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/94 (78%), Positives = 82/94 (88%), Gaps = 3/94 (3%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MSISASEARQRLFPL+EQVN+DH+PVRITS+AGDAVLMSA DYD+WQETVYLLRSPENAR
Sbjct 1 MSISASEARQRLFPLLEQVNSDHEPVRITSKAGDAVLMSAQDYDSWQETVYLLRSPENAR 60
Query 61 RLMEAVARDKAGHS---AFTKSVDELREMAGGEE 91
RLMEAVARD+AG +V EL E+AGG+E
Sbjct 61 RLMEAVARDRAGRPESVGHATTVGELEELAGGQE 94
>gi|302534753|ref|ZP_07287095.1| prevent-host-death protein [Streptomyces sp. C]
gi|302443648|gb|EFL15464.1| prevent-host-death protein [Streptomyces sp. C]
Length=90
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/90 (73%), Positives = 76/90 (85%), Gaps = 0/90 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
M ISASEAR+ LFPLIE+VN DH PVRI+S+ GDAVLMSA+DYD+WQETVYLLRSP NAR
Sbjct 1 MPISASEARKTLFPLIERVNNDHTPVRISSKNGDAVLMSAEDYDSWQETVYLLRSPANAR 60
Query 61 RLMEAVARDKAGHSAFTKSVDELREMAGGE 90
RLMEAVARD+ G + KS++EL +AG E
Sbjct 61 RLMEAVARDREGTTGIAKSMEELNALAGEE 90
>gi|294629730|ref|ZP_06708290.1| PHD family toxin-antitoxin system, antitoxin component [Streptomyces
sp. e14]
gi|292833063|gb|EFF91412.1| PHD family toxin-antitoxin system, antitoxin component [Streptomyces
sp. e14]
Length=90
Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/90 (72%), Positives = 77/90 (86%), Gaps = 0/90 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
M+ISASEAR+ LFPLI++VN DH PV I+SR GDAVLMSA DYD+WQETVYLLRSP NAR
Sbjct 1 MTISASEARRDLFPLIKRVNDDHTPVHISSRGGDAVLMSAADYDSWQETVYLLRSPANAR 60
Query 61 RLMEAVARDKAGHSAFTKSVDELREMAGGE 90
RLMEAVARD+AG + ++S+ EL+ +AG E
Sbjct 61 RLMEAVARDRAGTAGLSRSMAELQALAGEE 90
>gi|21220706|ref|NP_626485.1| hypothetical protein SCO2235 [Streptomyces coelicolor A3(2)]
gi|289772038|ref|ZP_06531416.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|6226501|sp|Q9Z4V7.1|YEFM_STRCO RecName: Full=Antitoxin YefM; AltName: Full=ORFU1E
gi|4469319|emb|CAB38327.1| hypothetical protein [Streptomyces coelicolor A3(2)]
gi|13751880|emb|CAC37261.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289702237|gb|EFD69666.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length=87
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/72 (71%), Positives = 61/72 (85%), Gaps = 0/72 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MSI+ASEARQ LFPLIEQVN DH PV ITSR G+AVLMS +D+ AW ETV+LLRSP NAR
Sbjct 1 MSITASEARQNLFPLIEQVNEDHAPVHITSRKGNAVLMSEEDFTAWTETVHLLRSPRNAR 60
Query 61 RLMEAVARDKAG 72
RL++++A +AG
Sbjct 61 RLLDSIAEAEAG 72
>gi|302545612|ref|ZP_07297954.1| PHD family toxin-antitoxin system, antitoxin component [Streptomyces
hygroscopicus ATCC 53653]
gi|302463230|gb|EFL26323.1| PHD family toxin-antitoxin system, antitoxin component [Streptomyces
himastatinicus ATCC 53653]
Length=87
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/81 (61%), Positives = 64/81 (80%), Gaps = 0/81 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MSI+ASEARQ LFPLIEQVN DH PV ITSR G+AVLMS +D+ +W ETV+LLRSP+NAR
Sbjct 1 MSITASEARQNLFPLIEQVNEDHAPVHITSRKGNAVLMSEEDFTSWTETVHLLRSPKNAR 60
Query 61 RLMEAVARDKAGHSAFTKSVD 81
RL++++ + G + + +D
Sbjct 61 RLLDSITEAEGGQTQQRELID 81
>gi|302545635|ref|ZP_07297977.1| PHD family toxin-antitoxin system, antitoxin component [Streptomyces
hygroscopicus ATCC 53653]
gi|302463253|gb|EFL26346.1| PHD family toxin-antitoxin system, antitoxin component [Streptomyces
himastatinicus ATCC 53653]
Length=87
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/81 (61%), Positives = 64/81 (80%), Gaps = 0/81 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
M I+ASEARQ LFPLIEQVN DH PV ITSR G+AVLMS +D+ +W ETV+LLRSP+NAR
Sbjct 1 MPITASEARQNLFPLIEQVNEDHAPVHITSRKGNAVLMSEEDFTSWTETVHLLRSPKNAR 60
Query 61 RLMEAVARDKAGHSAFTKSVD 81
RL++++A + G + + +D
Sbjct 61 RLLDSIAEAEDGKAQQRELID 81
>gi|256832886|ref|YP_003161613.1| prevent-host-death family protein [Jonesia denitrificans DSM
20603]
gi|256686417|gb|ACV09310.1| prevent-host-death family protein [Jonesia denitrificans DSM
20603]
Length=92
Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/72 (69%), Positives = 58/72 (81%), Gaps = 0/72 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MSISASEAR+ LFPLIE+VN DH+ + I SR G+AVLM AD+Y AWQET YL RSP NAR
Sbjct 1 MSISASEARKTLFPLIERVNQDHEAIEIVSRKGNAVLMPADEYAAWQETAYLFRSPANAR 60
Query 61 RLMEAVARDKAG 72
RL++A R +AG
Sbjct 61 RLLDAYDRARAG 72
>gi|289705294|ref|ZP_06501693.1| toxin-antitoxin system, antitoxin component, PHD family [Micrococcus
luteus SK58]
gi|289558044|gb|EFD51336.1| toxin-antitoxin system, antitoxin component, PHD family [Micrococcus
luteus SK58]
Length=86
Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/72 (69%), Positives = 56/72 (78%), Gaps = 0/72 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MSISASEAR+ LFPLIE+VN D V I SR G+AVLM AD+Y AWQET YL RSP NAR
Sbjct 1 MSISASEARKTLFPLIERVNADRDAVEIVSRKGNAVLMPADEYAAWQETAYLFRSPANAR 60
Query 61 RLMEAVARDKAG 72
RL++A R +AG
Sbjct 61 RLLDAYERARAG 72
>gi|86741247|ref|YP_481647.1| prevent-host-death protein [Frankia sp. CcI3]
gi|86568109|gb|ABD11918.1| Prevent-host-death protein [Frankia sp. CcI3]
Length=85
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/71 (64%), Positives = 58/71 (82%), Gaps = 0/71 (0%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARR 61
+ISASEAR+ LFPL+EQVN DH PV I S+ G+AVL+S +D+DA ET YLLR+P NARR
Sbjct 4 AISASEARKTLFPLLEQVNADHTPVEIVSKRGNAVLVSKEDWDAIVETNYLLRTPANARR 63
Query 62 LMEAVARDKAG 72
LME+V + ++G
Sbjct 64 LMESVEQWRSG 74
>gi|302535097|ref|ZP_07287439.1| prevent-host-death protein [Streptomyces sp. C]
gi|302443992|gb|EFL15808.1| prevent-host-death protein [Streptomyces sp. C]
Length=79
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/68 (62%), Positives = 54/68 (80%), Gaps = 1/68 (1%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSR-AGDAVLMSADDYDAWQETVYLLRSPENA 59
M ISA AR+R +PLI QVN DH P+ +TSR GD V+MSA+D+ +WQETV+LLRSP NA
Sbjct 1 MPISAKHARRRFYPLIRQVNEDHVPLEVTSREHGDVVIMSAEDFRSWQETVHLLRSPRNA 60
Query 60 RRLMEAVA 67
+ LME++A
Sbjct 61 QALMESIA 68
>gi|336178420|ref|YP_004583795.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
gi|334859400|gb|AEH09874.1| prevent-host-death family protein [Frankia symbiont of Datisca
glomerata]
Length=85
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (58%), Positives = 58/73 (80%), Gaps = 0/73 (0%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARR 61
+ISASEAR+ LFPLIE+VN DH PV I S+ G+AVL+S +D+D+ ET YLLRSP NA+R
Sbjct 4 AISASEARKTLFPLIERVNADHAPVEIVSKHGNAVLVSKEDWDSIMETNYLLRSPANAKR 63
Query 62 LMEAVARDKAGHS 74
L E++ + + G++
Sbjct 64 LTESIDQWRTGNA 76
>gi|29829748|ref|NP_824382.1| hypothetical protein SAV_3206 [Streptomyces avermitilis MA-4680]
gi|29606857|dbj|BAC70917.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=93
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/65 (64%), Positives = 54/65 (84%), Gaps = 0/65 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MSI+ASEAR+ LFPLI++VN DH+ + I S+ G+AVL+SA+DY A +E YLLRSP NAR
Sbjct 1 MSITASEARKALFPLIKKVNDDHEAIEIVSKHGNAVLVSAEDYAALREGSYLLRSPVNAR 60
Query 61 RLMEA 65
RL++A
Sbjct 61 RLLKA 65
>gi|15077435|gb|AAK83162.1|AF333038_2 AviX2 [Streptomyces viridochromogenes]
Length=93
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/65 (56%), Positives = 51/65 (79%), Gaps = 0/65 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MSI+ +R+ LFPLI++VN +H+ + I S+ G+AVL+SA+DY A +E YLLRSP NAR
Sbjct 1 MSINRERSRKALFPLIKKVNDNHEAIEIVSKHGNAVLVSAEDYAALREGSYLLRSPANAR 60
Query 61 RLMEA 65
RL++A
Sbjct 61 RLLKA 65
>gi|343521716|ref|ZP_08758682.1| prevent-host-death family protein [Actinomyces sp. oral taxon
175 str. F0384]
gi|343401125|gb|EGV13631.1| prevent-host-death family protein [Actinomyces sp. oral taxon
175 str. F0384]
Length=77
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/77 (52%), Positives = 49/77 (64%), Gaps = 0/77 (0%)
Query 1 MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
MS+SA EA + L LI+++ T H V I S G AVLM AD+Y +WQET YL RS +NAR
Sbjct 1 MSVSADEASRMLPALIDRIATSHHAVEIVSSNGRAVLMPADEYASWQETAYLFRSTKNAR 60
Query 61 RLMEAVARDKAGHSAFT 77
RL+ A R G A T
Sbjct 61 RLLYAYERALTGSRART 77
>gi|253700911|ref|YP_003022100.1| prevent-host-death family protein [Geobacter sp. M21]
gi|251775761|gb|ACT18342.1| prevent-host-death family protein [Geobacter sp. M21]
Length=83
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/81 (47%), Positives = 54/81 (67%), Gaps = 1/81 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGD-AVLMSADDYDAWQETVYLLRSPENAR 60
SI+ S R +L +E+V DH PV IT +A V+MS DDY+A +ET YLLRSP+N R
Sbjct 3 SITYSSVRSKLAETMEKVCDDHAPVIITRKAAKPVVMMSLDDYEALEETAYLLRSPKNVR 62
Query 61 RLMEAVARDKAGHSAFTKSVD 81
RL+E++A + G +A + +D
Sbjct 63 RLVESIAELETGKAAERELID 83
>gi|283852875|ref|ZP_06370136.1| prevent-host-death family protein [Desulfovibrio sp. FW1012B]
gi|283571704|gb|EFC19703.1| prevent-host-death family protein [Desulfovibrio sp. FW1012B]
Length=85
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/82 (49%), Positives = 54/82 (66%), Gaps = 1/82 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDAV-LMSADDYDAWQETVYLLRSPENAR 60
+IS + AR+ L +EQV DH PV IT + G AV +MS +DY+A +ET YLLRSP NA
Sbjct 3 AISYTHAREHLASTMEQVCNDHAPVVITRQKGRAVVMMSLEDYNAIEETAYLLRSPANAA 62
Query 61 RLMEAVARDKAGHSAFTKSVDE 82
RL ++AR KAG + ++E
Sbjct 63 RLRASLARAKAGEAEVHGLIEE 84
>gi|149377191|ref|ZP_01894939.1| hypothetical protein MDG893_16022 [Marinobacter algicola DG893]
gi|149358490|gb|EDM46964.1| hypothetical protein MDG893_16022 [Marinobacter algicola DG893]
Length=83
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/72 (53%), Positives = 51/72 (71%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRIT-SRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
+IS + AR L +EQV DH PV IT S+A V++S +DY+A QET YLLR+P+NAR
Sbjct 3 AISYTAARTNLAKTMEQVCEDHSPVIITRSKAQSVVMISLEDYEALQETAYLLRAPKNAR 62
Query 61 RLMEAVARDKAG 72
RL+E+VA + G
Sbjct 63 RLLESVAELEQG 74
>gi|197118310|ref|YP_002138737.1| antitoxin YefM, prevent-host-death family [Geobacter bemidjiensis
Bem]
gi|197087670|gb|ACH38941.1| antitoxin YefM, prevent-host-death family [Geobacter bemidjiensis
Bem]
Length=83
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/81 (46%), Positives = 53/81 (66%), Gaps = 1/81 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGD-AVLMSADDYDAWQETVYLLRSPENAR 60
SI+ S R +L +E+V DH PV IT +A V+MS DDY+A +ET YLLRSP+N R
Sbjct 3 SITYSSVRSKLAETMEKVCDDHAPVIITRKAAKPVVMMSLDDYEALEETAYLLRSPKNVR 62
Query 61 RLMEAVARDKAGHSAFTKSVD 81
RL+E++A + G + + +D
Sbjct 63 RLVESIAELETGKATERELID 83
>gi|326773841|ref|ZP_08233123.1| toxin-antitoxin system, antitoxin component, PHD family [Actinomyces
viscosus C505]
gi|326635980|gb|EGE36884.1| toxin-antitoxin system, antitoxin component, PHD family [Actinomyces
viscosus C505]
Length=86
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/64 (54%), Positives = 46/64 (72%), Gaps = 0/64 (0%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARR 61
++SA EA + L LI+++ T H V I S G AVLM AD+Y +WQET +L RSP+NARR
Sbjct 11 TVSADEASRTLPALIDRIATSHHAVEIVSSNGRAVLMPADEYASWQETAHLFRSPKNARR 70
Query 62 LMEA 65
L++A
Sbjct 71 LLDA 74
>gi|300115367|ref|YP_003761942.1| prevent-host-death family protein [Nitrosococcus watsonii C-113]
gi|299541304|gb|ADJ29621.1| prevent-host-death family protein [Nitrosococcus watsonii C-113]
Length=83
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (67%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLM-SADDYDAWQETVYLLRSPENAR 60
SIS + AR L +EQV DH P+ IT + AV+M S +DY A +ET YLLRSP+N R
Sbjct 3 SISYTAARSNLAKTMEQVCNDHAPIAITRKGESAVVMISMEDYQALEETAYLLRSPKNTR 62
Query 61 RLMEAVARDKAG 72
RL+E++A + G
Sbjct 63 RLIESIAELEMG 74
>gi|324016968|gb|EGB86187.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 117-3]
Length=92
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (71%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDA-VLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + + DH P+ IT + G+A VLMS ++Y++ +ET YLLRSP NAR
Sbjct 12 TISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANAR 71
Query 61 RLMEAVARDKAG 72
RLM+++ K+G
Sbjct 72 RLMDSIDSLKSG 83
>gi|227887067|ref|ZP_04004872.1| prevent-host-death family protein [Escherichia coli 83972]
gi|300974055|ref|ZP_07172429.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 200-1]
gi|300986930|ref|ZP_07177906.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 45-1]
13 more sequence titles
gi|301050033|ref|ZP_07196947.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 185-1]
gi|301648509|ref|ZP_07248233.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 146-1]
gi|26108796|gb|AAN80999.1|AE016762_252 Hypothetical protein yefM [Escherichia coli CFT073]
gi|91072878|gb|ABE07759.1| hypothetical protein YefM [Escherichia coli UTI89]
gi|227835417|gb|EEJ45883.1| prevent-host-death family protein [Escherichia coli 83972]
gi|300298217|gb|EFJ54602.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 185-1]
gi|300308952|gb|EFJ63472.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 200-1]
gi|300407816|gb|EFJ91354.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 45-1]
gi|301073412|gb|EFK88218.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 146-1]
gi|315295228|gb|EFU54563.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 153-1]
gi|315296374|gb|EFU55674.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 16-3]
gi|324008959|gb|EGB78178.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 57-2]
gi|324015758|gb|EGB84977.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 60-1]
Length=92
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (71%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDA-VLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + + DH P+ IT + G+A VLMS ++Y++ +ET YLLRSP NAR
Sbjct 12 TISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANAR 71
Query 61 RLMEAVARDKAG 72
RLM+++ K+G
Sbjct 72 RLMDSIDSLKSG 83
>gi|117624221|ref|YP_853134.1| antitoxin YefM [Escherichia coli APEC O1]
gi|237704475|ref|ZP_04534956.1| antitoxin YefM [Escherichia sp. 3_2_53FAA]
gi|300816647|ref|ZP_07096868.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 107-1]
25 more sequence titles
gi|300898606|ref|ZP_07116934.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 198-1]
gi|300903888|ref|ZP_07121788.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 84-1]
gi|300920259|ref|ZP_07136705.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 115-1]
gi|300936676|ref|ZP_07151580.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 21-1]
gi|300947330|ref|ZP_07161530.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 116-1]
gi|300956263|ref|ZP_07168570.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 175-1]
gi|301306500|ref|ZP_07212565.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 124-1]
gi|309797278|ref|ZP_07691673.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 145-7]
gi|332278828|ref|ZP_08391241.1| antitoxin YefM [Shigella sp. D9]
gi|81244805|gb|ABB65513.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|115513345|gb|ABJ01420.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli APEC O1]
gi|226900841|gb|EEH87100.1| antitoxin YefM [Escherichia sp. 3_2_53FAA]
gi|300316897|gb|EFJ66681.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 175-1]
gi|300357722|gb|EFJ73592.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 198-1]
gi|300404127|gb|EFJ87665.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 84-1]
gi|300412761|gb|EFJ96071.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 115-1]
gi|300453063|gb|EFK16683.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 116-1]
gi|300458257|gb|EFK21750.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 21-1]
gi|300530877|gb|EFK51939.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 107-1]
gi|300838248|gb|EFK66008.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 124-1]
gi|308119153|gb|EFO56415.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 145-7]
gi|315253370|gb|EFU33338.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 85-1]
gi|315285599|gb|EFU45041.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 110-3]
gi|332101180|gb|EGJ04526.1| antitoxin YefM [Shigella sp. D9]
gi|342929767|gb|EGU98489.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 79-10]
Length=92
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (71%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDA-VLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + + DH P+ IT + G+A VLMS ++Y++ +ET YLLRSP NAR
Sbjct 12 TISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANAR 71
Query 61 RLMEAVARDKAG 72
RLM+++ K+G
Sbjct 72 RLMDSIDSLKSG 83
>gi|308271728|emb|CBX28336.1| Antitoxin yefM [uncultured Desulfobacterium sp.]
Length=83
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/72 (48%), Positives = 52/72 (73%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDAV-LMSADDYDAWQETVYLLRSPENAR 60
+IS + ARQ L + +V +H PV +T + GD+V +MS +DY+A +ET YLLRSP+N R
Sbjct 3 AISYTAARQNLAKTMGKVCREHAPVIVTRKTGDSVVIMSLEDYEALEETAYLLRSPKNTR 62
Query 61 RLMEAVARDKAG 72
RL+E++A+ + G
Sbjct 63 RLIESIAQLENG 74
>gi|126659704|ref|ZP_01730833.1| Antitoxin of toxin-antitoxin system StbD [Cyanothece sp. CCY0110]
gi|126619049|gb|EAZ89789.1| Antitoxin of toxin-antitoxin system StbD [Cyanothece sp. CCY0110]
Length=87
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (66%), Gaps = 0/70 (0%)
Query 3 ISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRL 62
+SAS+AR LF L+E+VN DH P ITS+ GDAVL+S DD+++ QET+YL P +
Sbjct 4 VSASKARANLFSLVEEVNKDHLPRMITSKKGDAVLLSKDDWESLQETLYLQSIPGLVESI 63
Query 63 MEAVARDKAG 72
EA D G
Sbjct 64 KEAEKADDWG 73
>gi|74312560|ref|YP_310979.1| antitoxin YefM [Shigella sonnei Ss046]
gi|90111372|ref|NP_416521.2| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli str. K-12 substr. MG1655]
gi|110642231|ref|YP_669961.1| antitoxin YefM [Escherichia coli 536]
127 more sequence titles
gi|157159460|ref|YP_001463369.1| antitoxin YefM [Escherichia coli E24377A]
gi|157161510|ref|YP_001458828.1| antitoxin YefM [Escherichia coli HS]
gi|161486192|ref|NP_754432.2| antitoxin YefM [Escherichia coli CFT073]
gi|161984963|ref|YP_407341.2| antitoxin YefM [Shigella boydii Sb227]
gi|162138416|ref|YP_541290.2| antitoxin YefM [Escherichia coli UTI89]
gi|170081648|ref|YP_001730968.1| antitoxin YefM [Escherichia coli str. K-12 substr. DH10B]
gi|187731203|ref|YP_001879859.1| antitoxin YefM [Shigella boydii CDC 3083-94]
gi|188492661|ref|ZP_02999931.1| antitoxin YefM [Escherichia coli 53638]
gi|191167739|ref|ZP_03029547.1| addiction module antitoxin component YefM [Escherichia coli B7A]
gi|191170193|ref|ZP_03031747.1| addiction module antitoxin component YefM [Escherichia coli F11]
gi|193062924|ref|ZP_03044017.1| addiction module antitoxin component YefM [Escherichia coli E22]
gi|193071575|ref|ZP_03052483.1| addiction module antitoxin component YefM [Escherichia coli E110019]
gi|194428783|ref|ZP_03061319.1| addiction module antitoxin component YefM [Escherichia coli B171]
gi|194436071|ref|ZP_03068173.1| addiction module antitoxin component YefM [Escherichia coli 101-1]
gi|209919482|ref|YP_002293566.1| antitoxin YefM [Escherichia coli SE11]
gi|215487239|ref|YP_002329670.1| antitoxin YefM [Escherichia coli O127:H6 str. E2348/69]
gi|218549431|ref|YP_002383222.1| antitoxin YefM [Escherichia fergusonii ATCC 35469]
gi|218554580|ref|YP_002387493.1| antitoxin YefM [Escherichia coli IAI1]
gi|218558899|ref|YP_002391812.1| antitoxin YefM [Escherichia coli S88]
gi|218695643|ref|YP_002403310.1| antitoxin YefM [Escherichia coli 55989]
gi|238901208|ref|YP_002927004.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli BW2952]
gi|260844628|ref|YP_003222406.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O103:H2 str. 12009]
gi|260856000|ref|YP_003229891.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O26:H11 str. 11368]
gi|260868738|ref|YP_003235140.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O111:H- str. 11128]
gi|291283255|ref|YP_003500073.1| antitoxin yefM [Escherichia coli O55:H7 str. CB9615]
gi|293446377|ref|ZP_06662799.1| antitoxin yefM [Escherichia coli B088]
gi|301018898|ref|ZP_07183128.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 196-1]
gi|306814860|ref|ZP_07449022.1| antitoxin YefM [Escherichia coli NC101]
gi|307312416|ref|ZP_07592050.1| prevent-host-death family protein [Escherichia coli W]
gi|312967249|ref|ZP_07781465.1| prevent-host-death family protein [Escherichia coli 2362-75]
gi|312973741|ref|ZP_07787913.1| prevent-host-death family protein [Escherichia coli 1827-70]
gi|331642641|ref|ZP_08343776.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli H736]
gi|331647667|ref|ZP_08348759.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli M605]
gi|331653442|ref|ZP_08354443.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli M718]
gi|331658098|ref|ZP_08359060.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli TA206]
gi|331663516|ref|ZP_08364426.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli TA143]
gi|331668718|ref|ZP_08369566.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli TA271]
gi|331677924|ref|ZP_08378599.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli H591]
gi|60416312|sp|P69346.1|YEFM_ECOLI RecName: Full=Antitoxin YefM
gi|60416313|sp|P69347.1|YEFM_ECOL6 RecName: Full=Antitoxin YefM
gi|73856037|gb|AAZ88744.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|85675194|dbj|BAA15849.2| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli str. K12 substr. W3110]
gi|87082026|gb|AAC75078.2| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli str. K-12 substr. MG1655]
gi|110343823|gb|ABG70060.1| hypothetical protein ECP_2061 [Escherichia coli 536]
gi|157067190|gb|ABV06445.1| addiction module antitoxin component YefM [Escherichia coli HS]
gi|157081490|gb|ABV21198.1| antitoxin YefM [Escherichia coli E24377A]
gi|169889483|gb|ACB03190.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli str. K-12 substr. DH10B]
gi|187428195|gb|ACD07469.1| antitoxin YefM [Shigella boydii CDC 3083-94]
gi|188487860|gb|EDU62963.1| antitoxin YefM [Escherichia coli 53638]
gi|190902252|gb|EDV61993.1| addiction module antitoxin component YefM [Escherichia coli B7A]
gi|190909709|gb|EDV69294.1| addiction module antitoxin component YefM [Escherichia coli F11]
gi|192931567|gb|EDV84168.1| addiction module antitoxin component YefM [Escherichia coli E22]
gi|192955112|gb|EDV85607.1| addiction module antitoxin component YefM [Escherichia coli E110019]
gi|194413230|gb|EDX29516.1| addiction module antitoxin component YefM [Escherichia coli B171]
gi|194424799|gb|EDX40784.1| addiction module antitoxin component YefM [Escherichia coli 101-1]
gi|209912741|dbj|BAG77815.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215265311|emb|CAS09706.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O127:H6 str. E2348/69]
gi|218352375|emb|CAU98149.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli 55989]
gi|218356972|emb|CAQ89604.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
fergusonii ATCC 35469]
gi|218361348|emb|CAQ98936.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli IAI1]
gi|218365668|emb|CAR03405.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli S88]
gi|226237425|dbj|BAH46947.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O55:H7]
gi|238859999|gb|ACR61997.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli BW2952]
gi|257754649|dbj|BAI26151.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O26:H11 str. 11368]
gi|257759775|dbj|BAI31272.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O103:H2 str. 12009]
gi|257765094|dbj|BAI36589.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O111:H- str. 11128]
gi|260448881|gb|ACX39303.1| prevent-host-death family protein [Escherichia coli DH1]
gi|281179117|dbj|BAI55447.1| conserved hypothetical protein [Escherichia coli SE15]
gi|284922017|emb|CBG35095.1| antitoxin [Escherichia coli 042]
gi|290763128|gb|ADD57089.1| Antitoxin yefM [Escherichia coli O55:H7 str. CB9615]
gi|291323207|gb|EFE62635.1| antitoxin yefM [Escherichia coli B088]
gi|294493740|gb|ADE92496.1| prevent-host-death family protein [Escherichia coli IHE3034]
gi|299882452|gb|EFI90663.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli MS 196-1]
gi|305852254|gb|EFM52706.1| antitoxin YefM [Escherichia coli NC101]
gi|306907587|gb|EFN38090.1| prevent-host-death family protein [Escherichia coli W]
gi|307554086|gb|ADN46861.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli ABU 83972]
gi|307626436|gb|ADN70740.1| antitoxin YefM [Escherichia coli UM146]
gi|309702342|emb|CBJ01664.1| antitoxin [Escherichia coli ETEC H10407]
gi|310332336|gb|EFP99571.1| prevent-host-death family protein [Escherichia coli 1827-70]
gi|312288057|gb|EFR15961.1| prevent-host-death family protein [Escherichia coli 2362-75]
gi|315061293|gb|ADT75620.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli W]
gi|315136651|dbj|BAJ43810.1| antitoxin yefM [Escherichia coli DH1]
gi|320172626|gb|EFW47861.1| prevent-host-death family protein [Shigella dysenteriae CDC 74-1112]
gi|320185787|gb|EFW60541.1| prevent-host-death family protein [Shigella flexneri CDC 796-83]
gi|320657436|gb|EFX25234.1| antitoxin YefM [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320663252|gb|EFX30557.1| antitoxin YefM [Escherichia coli O55:H7 str. USDA 5905]
gi|323152407|gb|EFZ38695.1| prevent-host-death family protein [Escherichia coli EPECa14]
gi|323161935|gb|EFZ47809.1| prevent-host-death family protein [Escherichia coli E128010]
gi|323168847|gb|EFZ54527.1| prevent-host-death family protein [Shigella sonnei 53G]
gi|323177081|gb|EFZ62671.1| prevent-host-death family protein [Escherichia coli 1180]
gi|323187683|gb|EFZ72984.1| prevent-host-death family protein [Escherichia coli RN587/1]
gi|323378127|gb|ADX50395.1| prevent-host-death family protein [Escherichia coli KO11FL]
gi|323940900|gb|EGB37088.1| YefM protein [Escherichia coli E482]
gi|323948378|gb|EGB44363.1| hypothetical protein EREG_00081 [Escherichia coli H120]
gi|323951772|gb|EGB47646.1| YefM protein [Escherichia coli H252]
gi|323956185|gb|EGB51936.1| YefM protein [Escherichia coli H263]
gi|323961786|gb|EGB57387.1| YefM protein [Escherichia coli H489]
gi|323972832|gb|EGB68031.1| YefM protein [Escherichia coli TA007]
gi|324114050|gb|EGC08023.1| YefM protein [Escherichia fergusonii B253]
gi|324119048|gb|EGC12937.1| YefM protein [Escherichia coli E1167]
gi|330911856|gb|EGH40366.1| YefM protein (antitoxin to YoeB) [Escherichia coli AA86]
gi|331039439|gb|EGI11659.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli H736]
gi|331043391|gb|EGI15529.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli M605]
gi|331048291|gb|EGI20367.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli M718]
gi|331056346|gb|EGI28355.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli TA206]
gi|331059315|gb|EGI31292.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli TA143]
gi|331063912|gb|EGI35823.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli TA271]
gi|331074384|gb|EGI45704.1| toxin-antitoxin system, antitoxin component, PHD family [Escherichia
coli H591]
gi|332092398|gb|EGI97471.1| prevent-host-death family protein [Shigella boydii 5216-82]
gi|332097268|gb|EGJ02251.1| prevent-host-death family protein [Shigella boydii 3594-74]
gi|332343802|gb|AEE57136.1| prevent-host-death family protein [Escherichia coli UMNK88]
gi|339415466|gb|AEJ57138.1| prevent-host-death family protein [Escherichia coli UMNF18]
gi|340734215|gb|EGR63345.1| antitoxin YefM [Escherichia coli O104:H4 str. 01-09591]
gi|340739956|gb|EGR74187.1| antitoxin YefM [Escherichia coli O104:H4 str. LB226692]
gi|341916952|gb|EGT66569.1| hypothetical protein C22711_0596 [Escherichia coli O104:H4 str.
C227-11]
gi|342361202|gb|EGU25347.1| antitoxin YefM [Escherichia coli XH140A]
gi|344191725|gb|EGV45834.1| antitoxin YefM [Escherichia coli XH001]
gi|345338618|gb|EGW71045.1| prevent-host-death family protein [Escherichia coli 2534-86]
gi|345354792|gb|EGW87009.1| prevent-host-death family protein [Escherichia coli 3030-1]
gi|345362968|gb|EGW95113.1| prevent-host-death family protein [Escherichia coli STEC_EH250]
gi|345375331|gb|EGX07278.1| prevent-host-death family protein [Escherichia coli G58-1]
gi|345376877|gb|EGX08809.1| prevent-host-death family protein [Escherichia coli STEC_H.1.8]
gi|345393467|gb|EGX23241.1| prevent-host-death family protein [Escherichia coli TX1999]
gi|345432626|dbj|BAK68957.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O157:H45]
gi|345432733|dbj|BAK69062.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O157:H16]
gi|345432787|dbj|BAK69115.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O157:H39]
gi|345432841|dbj|BAK69168.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O157:H43]
Length=83
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (71%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDA-VLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + + DH P+ IT + G+A VLMS ++Y++ +ET YLLRSP NAR
Sbjct 3 TISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANAR 62
Query 61 RLMEAVARDKAG 72
RLM+++ K+G
Sbjct 63 RLMDSIDSLKSG 74
>gi|345388433|gb|EGX18244.1| prevent-host-death family protein [Escherichia coli STEC_S1191]
Length=83
Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (71%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDA-VLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + + DH P+ IT + G+A VLMS ++Y++ +ET YLLRSP NAR
Sbjct 3 TISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANAR 62
Query 61 RLMEAVARDKAG 72
RLM+++ K+G
Sbjct 63 RLMDSIDSLKSG 74
>gi|75766064|pdb|2A6Q|A Chain A, Crystal Structure Of Yefm-Yoeb Complex
gi|75766065|pdb|2A6Q|B Chain B, Crystal Structure Of Yefm-Yoeb Complex
gi|75766066|pdb|2A6Q|C Chain C, Crystal Structure Of Yefm-Yoeb Complex
gi|75766067|pdb|2A6Q|D Chain D, Crystal Structure Of Yefm-Yoeb Complex
Length=86
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (71%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDA-VLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + + DH P+ IT + G+A VLMS ++Y++ +ET YLLRSP NAR
Sbjct 6 TISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANAR 65
Query 61 RLMEAVARDKAG 72
RLM+++ K+G
Sbjct 66 RLMDSIDSLKSG 77
>gi|338769917|gb|EGP24689.1| Antitoxin yefM [Escherichia coli PCN033]
Length=83
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (71%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDA-VLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + + DH P+ IT + G+A VLMS ++Y++ +ET YLLRSP NAR
Sbjct 3 TISYSEARQNLSATMMKAVDDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANAR 62
Query 61 RLMEAVARDKAG 72
RLM+++ K+G
Sbjct 63 RLMDSIDSLKSG 74
>gi|304398753|ref|ZP_07380624.1| prevent-host-death family protein [Pantoea sp. aB]
gi|304353700|gb|EFM18076.1| prevent-host-death family protein [Pantoea sp. aB]
Length=83
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/73 (51%), Positives = 50/73 (69%), Gaps = 1/73 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGD-AVLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + Q D PV IT + G+ VLMS D+Y++ +ET YLLRSP+NAR
Sbjct 3 AISYSEARQNLSATMVQTVEDKAPVLITRQNGESCVLMSLDEYNSLEETAYLLRSPKNAR 62
Query 61 RLMEAVARDKAGH 73
RLM+A+ ++G
Sbjct 63 RLMDAIESLQSGK 75
>gi|332707577|ref|ZP_08427611.1| PhdYefM prevent-host-death family protein [Lyngbya majuscula
3L]
gi|332353650|gb|EGJ33156.1| PhdYefM prevent-host-death family protein [Lyngbya majuscula
3L]
Length=83
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (67%), Gaps = 1/75 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRA-GDAVLMSADDYDAWQETVYLLRSPENAR 60
SIS + AR L +E+V DH PV IT + G V++S +DY + +ET YLLRSP+NA+
Sbjct 3 SISYTSARGNLAKTMEKVCQDHAPVAITRKGEGAVVMISMEDYQSLEETAYLLRSPKNAQ 62
Query 61 RLMEAVARDKAGHSA 75
RL+ AVA +AG +
Sbjct 63 RLISAVAELEAGKGS 77
>gi|50119395|ref|YP_048562.1| antitoxin YefM [Pectobacterium atrosepticum SCRI1043]
gi|49609921|emb|CAG73359.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043]
Length=83
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/74 (49%), Positives = 51/74 (69%), Gaps = 1/74 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDA-VLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + + D P+ IT + G+A VLMS ++Y++ +ET YLLRSP NA+
Sbjct 3 TISYSEARQNLSATMMKTVEDRAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANAK 62
Query 61 RLMEAVARDKAGHS 74
RLM ++ KAG+S
Sbjct 63 RLMNSIESLKAGNS 76
>gi|121997213|ref|YP_001002000.1| prevent-host-death family protein [Halorhodospira halophila SL1]
gi|121588618|gb|ABM61198.1| prevent-host-death family protein [Halorhodospira halophila SL1]
Length=87
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/68 (53%), Positives = 47/68 (70%), Gaps = 1/68 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGD-AVLMSADDYDAWQETVYLLRSPENAR 60
+IS ++AR L LI++V TDH PVRI R G AV+M+ +DY QET+YLL +P NA
Sbjct 3 TISYTDARNHLKELIDRVGTDHTPVRIERRGGSAAVIMAEEDYTGLQETLYLLGNPANAE 62
Query 61 RLMEAVAR 68
RL +A AR
Sbjct 63 RLRQARAR 70
>gi|24113402|ref|NP_707912.1| antitoxin YefM [Shigella flexneri 2a str. 301]
gi|30063468|ref|NP_837639.1| antitoxin YefM [Shigella flexneri 2a str. 2457T]
gi|110805991|ref|YP_689511.1| antitoxin YefM [Shigella flexneri 5 str. 8401]
gi|60390849|sp|Q83KJ8.1|YEFM_SHIFL RecName: Full=Antitoxin YefM
gi|24052422|gb|AAN43619.1| conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30041721|gb|AAP17448.1| hypothetical protein S2201 [Shigella flexneri 2a str. 2457T]
gi|110615539|gb|ABF04206.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|281601470|gb|ADA74454.1| Antitoxin yefM [Shigella flexneri 2002017]
Length=90
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (71%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDA-VLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + + DH P+ IT + G+A VLMS ++Y++ +ET YLLRSP NAR
Sbjct 3 TISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANAR 62
Query 61 RLMEAVARDKAG 72
RLM+++ K+G
Sbjct 63 RLMDSIDSLKSG 74
>gi|345432680|dbj|BAK69010.1| antitoxin of the YoeB-YefM toxin-antitoxin system [Escherichia
coli O157:HNM]
Length=83
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/72 (49%), Positives = 51/72 (71%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDA-VLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + + DH P+ IT + G+A VLMS ++Y++ +ET YLLRSP NAR
Sbjct 3 TISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANAR 62
Query 61 RLMEAVARDKAG 72
+LM+++ K+G
Sbjct 63 KLMDSIDSLKSG 74
>gi|320193305|gb|EFW67943.1| prevent-host-death family protein [Escherichia coli WV_060327]
Length=83
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/72 (49%), Positives = 50/72 (70%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGD-AVLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + + DH P+ IT + G+ VLMS ++Y++ +ET YLLRSP NAR
Sbjct 3 TISYSEARQNLSATMMKAVEDHAPILITRQNGESCVLMSLEEYNSLEETAYLLRSPANAR 62
Query 61 RLMEAVARDKAG 72
RLM+++ K+G
Sbjct 63 RLMDSIDSLKSG 74
>gi|335419376|ref|ZP_08550429.1| prevent-host-death family protein [Salinisphaera shabanensis
E1L3A]
gi|334896749|gb|EGM34895.1| prevent-host-death family protein [Salinisphaera shabanensis
E1L3A]
Length=83
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/67 (54%), Positives = 48/67 (72%), Gaps = 1/67 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRIT-SRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
+IS + AR L +EQV DH P+ IT ++A V+MS +DY+A QET YLLR+P NAR
Sbjct 3 AISYTAARTNLARTMEQVCEDHSPMIITRNKARSVVMMSLEDYEALQETAYLLRAPRNAR 62
Query 61 RLMEAVA 67
RL+E+VA
Sbjct 63 RLLESVA 69
>gi|121997585|ref|YP_001002372.1| prevent-host-death family protein [Halorhodospira halophila SL1]
gi|121588990|gb|ABM61570.1| prevent-host-death family protein [Halorhodospira halophila SL1]
Length=83
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (51%), Positives = 51/67 (77%), Gaps = 1/67 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRIT-SRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
+IS + AR++L +++V DH P+ IT ++A V++S +DY+A QET YLLRSP+NAR
Sbjct 3 AISYTAARRQLASTMDKVCEDHAPIIITRNKAQSVVMISLEDYEALQETAYLLRSPKNAR 62
Query 61 RLMEAVA 67
RL+E+VA
Sbjct 63 RLLESVA 69
>gi|67924642|ref|ZP_00518053.1| Prevent-host-death protein [Crocosphaera watsonii WH 8501]
gi|67853515|gb|EAM48863.1| Prevent-host-death protein [Crocosphaera watsonii WH 8501]
Length=84
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (42%), Positives = 54/80 (68%), Gaps = 1/80 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGD-AVLMSADDYDAWQETVYLLRSPENAR 60
+I++S+A+++L LIEQV D +P + + G AVLMS D+++AWQET+YLL +P N
Sbjct 3 AITSSQAKEQLDELIEQVILDVEPTIVCNAQGKKAVLMSLDEFNAWQETLYLLSNPANPE 62
Query 61 RLMEAVARDKAGHSAFTKSV 80
L E++ + K+G + K +
Sbjct 63 HLRESIKQAKSGQKSVRKLI 82
>gi|238898229|ref|YP_002923910.1| addiction module antitoxin [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465988|gb|ACQ67762.1| addiction module antitoxin [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length=83
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/73 (50%), Positives = 49/73 (68%), Gaps = 1/73 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGD-AVLMSADDYDAWQETVYLLRSPENAR 60
++S SEARQ L + Q D PV IT + G+ VLMS D+Y++ +ET YL+RSP+NAR
Sbjct 3 AVSYSEARQNLSTTMIQTIEDRAPVLITRQNGESCVLMSLDEYNSLEETAYLMRSPKNAR 62
Query 61 RLMEAVARDKAGH 73
RLM++V K G
Sbjct 63 RLMDSVESLKEGF 75
>gi|222033788|emb|CAP76529.1| Antitoxin yefM [Escherichia coli LF82]
gi|312946646|gb|ADR27473.1| antitoxin YefM [Escherichia coli O83:H1 str. NRG 857C]
gi|333968906|gb|AEG35711.1| Antitoxin YefM [Escherichia coli NA114]
Length=83
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/66 (52%), Positives = 48/66 (73%), Gaps = 1/66 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDA-VLMSADDYDAWQETVYLLRSPENAR 60
+IS SEARQ L + + DH P+ IT + G+A VLMS ++Y++ +ET YLLRSP NAR
Sbjct 3 TISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANAR 62
Query 61 RLMEAV 66
RLM+++
Sbjct 63 RLMDSI 68
>gi|301061182|ref|ZP_07201971.1| toxin-antitoxin system, antitoxin component, PHD family [delta
proteobacterium NaphS2]
gi|300444724|gb|EFK08700.1| toxin-antitoxin system, antitoxin component, PHD family [delta
proteobacterium NaphS2]
Length=83
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/73 (43%), Positives = 53/73 (73%), Gaps = 1/73 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRITSRAGDAV-LMSADDYDAWQETVYLLRSPENAR 60
+I+ + ARQ L +E+V DH P+ +T ++ ++V +MS +D+ A +ET YLLRSP+N R
Sbjct 3 AITYTAARQNLAKTMEKVCNDHAPMIVTRKSSESVVIMSLEDFQALEETAYLLRSPKNTR 62
Query 61 RLMEAVARDKAGH 73
RL+E++A+ + G+
Sbjct 63 RLIESIAQLENGN 75
>gi|126665068|ref|ZP_01736051.1| hypothetical protein MELB17_18409 [Marinobacter sp. ELB17]
gi|126630438|gb|EBA01053.1| hypothetical protein MELB17_18409 [Marinobacter sp. ELB17]
Length=83
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/72 (49%), Positives = 50/72 (70%), Gaps = 1/72 (1%)
Query 2 SISASEARQRLFPLIEQVNTDHQPVRIT-SRAGDAVLMSADDYDAWQETVYLLRSPENAR 60
+IS + AR L ++QV D P+ IT S++ V++S +DY+A QET YLLRSP+NAR
Sbjct 3 AISYTAARTNLAKTMDQVCEDRSPIIITRSKSQSVVMISLEDYEALQETAYLLRSPKNAR 62
Query 61 RLMEAVARDKAG 72
RL+E+VA + G
Sbjct 63 RLLESVAELEQG 74
Lambda K H
0.314 0.127 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128725229700
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40