BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3359 Length=396 Score E Sequences producing significant alignments: (Bits) Value gi|15610495|ref|NP_217876.1| oxidoreductase [Mycobacterium tuber... 803 0.0 gi|289759514|ref|ZP_06518892.1| oxidoreductase [Mycobacterium tu... 802 0.0 gi|148824568|ref|YP_001289322.1| oxidoreductase [Mycobacterium t... 801 0.0 gi|308406134|ref|ZP_07495246.2| oxidoreductase [Mycobacterium tu... 783 0.0 gi|289752069|ref|ZP_06511447.1| NADH:flavin oxidoreductase [Myco... 738 0.0 gi|289755489|ref|ZP_06514867.1| oxidoreductase [Mycobacterium tu... 716 0.0 gi|240169073|ref|ZP_04747732.1| hypothetical protein MkanA1_0715... 696 0.0 gi|254820266|ref|ZP_05225267.1| oxidoreductase, FAD/FMN-binding ... 690 0.0 gi|342861570|ref|ZP_08718217.1| oxidoreductase, FAD/FMN-binding ... 681 0.0 gi|296168834|ref|ZP_06850507.1| oxidoreductase [Mycobacterium pa... 681 0.0 gi|118466821|ref|YP_883460.1| oxidoreductase, FAD/FMN-binding su... 673 0.0 gi|41409562|ref|NP_962398.1| hypothetical protein MAP3464 [Mycob... 673 0.0 gi|183981197|ref|YP_001849488.1| oxidoreductase [Mycobacterium m... 670 0.0 gi|289555637|ref|ZP_06444847.1| LOW QUALITY PROTEIN: oxidoreduct... 667 0.0 gi|333991835|ref|YP_004524449.1| oxidoreductase [Mycobacterium s... 661 0.0 gi|120402556|ref|YP_952385.1| NADH:flavin oxidoreductase/NADH ox... 646 0.0 gi|108798174|ref|YP_638371.1| NADH:flavin oxidoreductase/NADH ox... 640 0.0 gi|126433832|ref|YP_001069523.1| NADH:flavin oxidoreductase/NADH... 637 0.0 gi|145225456|ref|YP_001136134.1| NADH:flavin oxidoreductase/NADH... 628 4e-178 gi|315445809|ref|YP_004078688.1| NADH:flavin oxidoreductase [Myc... 628 6e-178 gi|118473868|ref|YP_886022.1| NADH:flavin oxidoreductase/NADH ox... 622 2e-176 gi|169630773|ref|YP_001704422.1| oxidoreductase [Mycobacterium a... 563 2e-158 gi|226362184|ref|YP_002779962.1| oxidoreductase [Rhodococcus opa... 511 8e-143 gi|229493009|ref|ZP_04386804.1| oxidoreductase [Rhodococcus eryt... 511 8e-143 gi|226304848|ref|YP_002764806.1| oxidoreductase [Rhodococcus ery... 510 1e-142 gi|333918632|ref|YP_004492213.1| oxidoreductase [Amycolicicoccus... 510 1e-142 gi|111020034|ref|YP_703006.1| NADH-dependent flavin oxidoreducta... 505 4e-141 gi|325676160|ref|ZP_08155841.1| oxidoreductase [Rhodococcus equi... 505 7e-141 gi|312138456|ref|YP_004005792.1| oxidoreductase [Rhodococcus equ... 504 7e-141 gi|269128148|ref|YP_003301518.1| NADH:flavin oxidoreductase/NADH... 503 3e-140 gi|256394388|ref|YP_003115952.1| NADH:flavin oxidoreductase/NADH... 502 5e-140 gi|271966837|ref|YP_003341033.1| NADH:flavin oxidoreductase/NADH... 495 4e-138 gi|120403864|ref|YP_953693.1| NADH:flavin oxidoreductase/NADH ox... 493 2e-137 gi|288916056|ref|ZP_06410437.1| NADH:flavin oxidoreductase/NADH ... 492 4e-137 gi|111022784|ref|YP_705756.1| NADH-dependent flavin oxidoreducta... 482 4e-134 gi|289763542|ref|ZP_06522920.1| hypothetical oxidoreductase [Myc... 476 4e-132 gi|54026214|ref|YP_120456.1| putative NADH-dependent flavin oxid... 475 5e-132 gi|54025338|ref|YP_119580.1| putative oxidoreductase [Nocardia f... 474 8e-132 gi|226365292|ref|YP_002783075.1| oxidoreductase [Rhodococcus opa... 473 2e-131 gi|312197382|ref|YP_004017443.1| NADH:flavin oxidoreductase/NADH... 471 6e-131 gi|269127691|ref|YP_003301061.1| NADH:flavin oxidoreductase/NADH... 471 7e-131 gi|111025778|ref|YP_708198.1| flavin reductase [Rhodococcus jost... 465 5e-129 gi|326331657|ref|ZP_08197945.1| oxidoreductase [Nocardioidaceae ... 450 2e-124 gi|262200745|ref|YP_003271953.1| NADH:flavin oxidoreductase/NADH... 444 1e-122 gi|302528347|ref|ZP_07280689.1| NADH-dependent flavin oxidoreduc... 436 2e-120 gi|330466753|ref|YP_004404496.1| NADH:flavin oxidoreductase/NADH... 434 1e-119 gi|343925725|ref|ZP_08765240.1| putative oxidoreductase [Gordoni... 432 4e-119 gi|311744286|ref|ZP_07718090.1| oxidoreductase [Aeromicrobium ma... 429 3e-118 gi|326383165|ref|ZP_08204854.1| NADH:flavin oxidoreductase/NADH ... 428 9e-118 gi|118468266|ref|YP_887208.1| NADH:flavin oxidoreductase/NADH ox... 417 2e-114 >gi|15610495|ref|NP_217876.1| oxidoreductase [Mycobacterium tuberculosis H37Rv] gi|15842955|ref|NP_337992.1| oxidoreductase, FMN-binding [Mycobacterium tuberculosis CDC1551] gi|31794542|ref|NP_857035.1| oxidoreductase [Mycobacterium bovis AF2122/97] 63 more sequence titles Length=396 Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/396 (99%), Positives = 396/396 (100%), Gaps = 0/396 (0%) Query 1 VAPGSCEAPDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMT 60 +APGSCEAPDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMT Sbjct 1 MAPGSCEAPDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMT 60 Query 61 TVAYCAVSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQA 120 TVAYCAVSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQA Sbjct 61 TVAYCAVSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQA 120 Query 121 TALAPVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAF 180 TALAPVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAF Sbjct 121 TALAPVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAF 180 Query 181 LSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEAL 240 LSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEAL Sbjct 181 LSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEAL 240 Query 241 TTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFR 300 TTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFR Sbjct 241 TTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFR 300 Query 301 EYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLV 360 EYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLV Sbjct 301 EYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLV 360 Query 361 NRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 396 NRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP Sbjct 361 NRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 396 >gi|289759514|ref|ZP_06518892.1| oxidoreductase [Mycobacterium tuberculosis T85] gi|289715078|gb|EFD79090.1| oxidoreductase [Mycobacterium tuberculosis T85] Length=396 Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/396 (99%), Positives = 396/396 (100%), Gaps = 0/396 (0%) Query 1 VAPGSCEAPDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMT 60 +APGSCEAPDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMT Sbjct 1 MAPGSCEAPDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMT 60 Query 61 TVAYCAVSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQA 120 TVAYCAVSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQA Sbjct 61 TVAYCAVSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQA 120 Query 121 TALAPVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAF 180 TALAPVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAF Sbjct 121 TALAPVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAF 180 Query 181 LSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEAL 240 LSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEAL Sbjct 181 LSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEAL 240 Query 241 TTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFR 300 TTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFR Sbjct 241 TTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFR 300 Query 301 EYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLV 360 EYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGF+FVAMARALLAEPDLV Sbjct 301 EYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFDFVAMARALLAEPDLV 360 Query 361 NRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 396 NRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP Sbjct 361 NRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 396 >gi|148824568|ref|YP_001289322.1| oxidoreductase [Mycobacterium tuberculosis F11] gi|148723095|gb|ABR07720.1| hypothetical oxidoreductase [Mycobacterium tuberculosis F11] Length=396 Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/396 (99%), Positives = 395/396 (99%), Gaps = 0/396 (0%) Query 1 VAPGSCEAPDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMT 60 +APGSCEAPDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMT Sbjct 1 MAPGSCEAPDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMT 60 Query 61 TVAYCAVSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQA 120 TVAYCAVSPGGRT GNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQA Sbjct 61 TVAYCAVSPGGRTCGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQA 120 Query 121 TALAPVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAF 180 TALAPVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAF Sbjct 121 TALAPVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAF 180 Query 181 LSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEAL 240 LSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEAL Sbjct 181 LSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEAL 240 Query 241 TTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFR 300 TTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFR Sbjct 241 TTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFR 300 Query 301 EYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLV 360 EYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLV Sbjct 301 EYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLV 360 Query 361 NRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 396 NRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP Sbjct 361 NRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 396 >gi|308406134|ref|ZP_07495246.2| oxidoreductase [Mycobacterium tuberculosis SUMu012] gi|308364400|gb|EFP53251.1| oxidoreductase [Mycobacterium tuberculosis SUMu012] gi|323717980|gb|EGB27167.1| oxidoreductase [Mycobacterium tuberculosis CDC1551A] gi|339296186|gb|AEJ48297.1| oxidoreductase [Mycobacterium tuberculosis CCDC5079] gi|339299789|gb|AEJ51899.1| oxidoreductase [Mycobacterium tuberculosis CCDC5180] Length=386 Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/386 (99%), Positives = 386/386 (100%), Gaps = 0/386 (0%) Query 11 VFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSPG 70 +FNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSPG Sbjct 1 MFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSPG 60 Query 71 GRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFFN 130 GRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFFN Sbjct 61 GRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFFN 120 Query 131 PIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRDD 190 PIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRDD Sbjct 121 PIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRDD 180 Query 191 EFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDDG 250 EFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDDG Sbjct 181 EFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDDG 240 Query 251 GLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYLL 310 GLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYLL Sbjct 241 GLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYLL 300 Query 311 REARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQV 370 REARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQV Sbjct 301 REARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQV 360 Query 371 RSACTHCNQCMATIYRRTHCVVTGAP 396 RSACTHCNQCMATIYRRTHCVVTGAP Sbjct 361 RSACTHCNQCMATIYRRTHCVVTGAP 386 >gi|289752069|ref|ZP_06511447.1| NADH:flavin oxidoreductase [Mycobacterium tuberculosis T92] gi|289692656|gb|EFD60085.1| NADH:flavin oxidoreductase [Mycobacterium tuberculosis T92] Length=369 Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/365 (99%), Positives = 363/365 (99%), Gaps = 0/365 (0%) Query 32 FEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSPGGRTGGNQIWMRPHAVPGLRRL 91 +A TPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSPGGRTGGNQIWMRPHAVPGLRRL Sbjct 5 LKASTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSPGGRTGGNQIWMRPHAVPGLRRL 64 Query 92 TEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFFNPIAMRFAQKATREDIDDVLAA 151 TEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFFNPIAMRFAQKATREDIDDVLAA Sbjct 65 TEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFFNPIAMRFAQKATREDIDDVLAA 124 Query 152 HAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRDDEFGGSLQNRAKVARGLVMAVR 211 HAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRDDEFGGSLQNRAKVARGLVMAVR Sbjct 125 HAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRDDEFGGSLQNRAKVARGLVMAVR 184 Query 212 RAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDDGGLDAIELTAGSSLVNPMYLFR 271 RAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDDGGLDAIELTAGSSLVNPMYLFR Sbjct 185 RAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDDGGLDAIELTAGSSLVNPMYLFR 244 Query 272 GDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYLLREARLFRAELTIPLILLGGIT 331 GDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYLLREARLFRAELTIPLILLGGIT Sbjct 245 GDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYLLREARLFRAELTIPLILLGGIT 304 Query 332 NRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQVRSACTHCNQCMATIYRRTHCV 391 NRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQVRSACTHCNQCMATIYRRTHCV Sbjct 305 NRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQVRSACTHCNQCMATIYRRTHCV 364 Query 392 VTGAP 396 VTGAP Sbjct 365 VTGAP 369 >gi|289755489|ref|ZP_06514867.1| oxidoreductase [Mycobacterium tuberculosis EAS054] gi|289696076|gb|EFD63505.1| oxidoreductase [Mycobacterium tuberculosis EAS054] Length=352 Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/352 (99%), Positives = 352/352 (100%), Gaps = 0/352 (0%) Query 45 LIEYHRLPAAGGVAMTTVAYCAVSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISA 104 +IEYHRLPAAGGVAMTTVAYCAVSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISA Sbjct 1 MIEYHRLPAAGGVAMTTVAYCAVSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISA 60 Query 105 QIGHAGPVADARSNQATALAPVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGF 164 QIGHAGPVADARSNQATALAPVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGF Sbjct 61 QIGHAGPVADARSNQATALAPVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGF 120 Query 165 DAVEIHLGHNYLASAFLSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKL 224 DAVEIHLGHNYLASAFLSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKL Sbjct 121 DAVEIHLGHNYLASAFLSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKL 180 Query 225 NMTDGIRGGITVDEALTTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFK 284 NMTDGIRGGITVDEALTTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFK Sbjct 181 NMTDGIRGGITVDEALTTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFK 240 Query 285 PPLRWGIRMTGHRFFREYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGF 344 PPLRWGIRMTGHRFFREYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGF Sbjct 241 PPLRWGIRMTGHRFFREYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGF 300 Query 345 EFVAMARALLAEPDLVNRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 396 EFVAMARALLAEPDLVNRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP Sbjct 301 EFVAMARALLAEPDLVNRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 352 >gi|240169073|ref|ZP_04747732.1| hypothetical protein MkanA1_07154 [Mycobacterium kansasii ATCC 12478] Length=394 Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/390 (89%), Positives = 370/390 (95%), Gaps = 0/390 (0%) Query 7 EAPDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCA 66 +APDV PAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGV MTTVAYCA Sbjct 3 DAPDVLGPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVGMTTVAYCA 62 Query 67 VSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPV 126 VSPGGRT G+ +WMRP AVPGLRRLT+A+HAEGAA+SAQIGHAGPVADARSN+ATALAPV Sbjct 63 VSPGGRTSGDGMWMRPEAVPGLRRLTDAVHAEGAAVSAQIGHAGPVADARSNKATALAPV 122 Query 127 RFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLN 186 RFFNPIAMRFA+KATR+DI DV AAHA+AARLAVDAGFDAVEIHLGHNYLAS+FLSPL+N Sbjct 123 RFFNPIAMRFAKKATRDDIADVTAAHANAARLAVDAGFDAVEIHLGHNYLASSFLSPLIN 182 Query 187 RRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWL 246 RRDDEFGGSL+NRAKVARGLV+AVR AV+QQ+AVTAKLNM DGIRGGIT +EALTTA+WL Sbjct 183 RRDDEFGGSLENRAKVARGLVLAVRHAVQQQIAVTAKLNMADGIRGGITTEEALTTAKWL 242 Query 247 QDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRD 306 QDDGGLDA+ELTAGSSLVNPMYLFRGDAPVKEFA AFKPPLRWGIRMTGH+F REYPYRD Sbjct 243 QDDGGLDALELTAGSSLVNPMYLFRGDAPVKEFAGAFKPPLRWGIRMTGHKFLREYPYRD 302 Query 307 AYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAE 366 AYLLR+ARLFRAEL++PLILLGGITNR TMDLAMAEGF+FVAMARALLAEPDLVNRIAAE Sbjct 303 AYLLRDARLFRAELSMPLILLGGITNRETMDLAMAEGFDFVAMARALLAEPDLVNRIAAE 362 Query 367 GSQVRSACTHCNQCMATIYRRTHCVVTGAP 396 G + RSACTHCN CM TIY RT CVVTGAP Sbjct 363 GQRARSACTHCNLCMPTIYSRTRCVVTGAP 392 >gi|254820266|ref|ZP_05225267.1| oxidoreductase, FAD/FMN-binding superfamily protein [Mycobacterium intracellulare ATCC 13950] Length=404 Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/393 (84%), Positives = 365/393 (93%), Gaps = 5/393 (1%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PDVF+PAKLGP+TLRNR IK+ATFEARTP+A+VTDDLIEYHRLPAAGGV MTTVAYCAVS Sbjct 5 PDVFSPAKLGPITLRNRTIKSATFEARTPEAMVTDDLIEYHRLPAAGGVGMTTVAYCAVS 64 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 PGGRT GN IWMRP AVPG RRLT AIHAEGAA+SAQIGHAGPVA+A+SN+A ALAPVRF Sbjct 65 PGGRTEGNGIWMRPEAVPGFRRLTHAIHAEGAAVSAQIGHAGPVANAKSNKAKALAPVRF 124 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 FNPI MRFA+KATREDIDDV+ HA+AARLA++AGFDAVEIHLGHNYLAS+FLSPL+NRR Sbjct 125 FNPIGMRFAKKATREDIDDVIEGHANAARLAIEAGFDAVEIHLGHNYLASSFLSPLINRR 184 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQ---VAVTAKLNMTDGIRGGITVDEALTTARW 245 DDEFGGSLQNRAKVARG+VMAVRRAV ++ +AVTAKLNM DG+RGGI+ DE+LTTA+W Sbjct 185 DDEFGGSLQNRAKVARGIVMAVRRAVEKEGTPIAVTAKLNMADGVRGGISTDESLTTAKW 244 Query 246 LQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYR 305 L++DGGLDAIELTAGSSLVNPMYLFRGDAP+K+FA AFKPPLRWG+RMTG +F REYPYR Sbjct 245 LEEDGGLDAIELTAGSSLVNPMYLFRGDAPLKQFAGAFKPPLRWGMRMTGKKFLREYPYR 304 Query 306 DAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAA 365 +AYLLR+A+LFRAEL +PLILLGGITNR TMDLAMAEGFEFVAMARALLAEPDL+NRIAA Sbjct 305 EAYLLRDAKLFRAELKMPLILLGGITNRETMDLAMAEGFEFVAMARALLAEPDLINRIAA 364 Query 366 EGSQ--VRSACTHCNQCMATIYRRTHCVVTGAP 396 E +Q V SACTHCNQCM TIY RTHCVVTGAP Sbjct 365 EDAQHRVHSACTHCNQCMPTIYSRTHCVVTGAP 397 >gi|342861570|ref|ZP_08718217.1| oxidoreductase, FAD/FMN-binding superfamily protein [Mycobacterium colombiense CECT 3035] gi|342131059|gb|EGT84348.1| oxidoreductase, FAD/FMN-binding superfamily protein [Mycobacterium colombiense CECT 3035] Length=398 Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/391 (83%), Positives = 363/391 (93%), Gaps = 5/391 (1%) Query 11 VFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSPG 70 +F+PAKLGP+TLRNR IK+ATFEARTP+ALVTDDLIEYHRLPAAGGV MTTVAYCAVSPG Sbjct 1 MFSPAKLGPITLRNRTIKSATFEARTPEALVTDDLIEYHRLPAAGGVGMTTVAYCAVSPG 60 Query 71 GRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFFN 130 GRT GN IWMRP AVPG RRLT+AIHAEGAA+SAQIGHAGPVA+A+SN+A ALAPVRFFN Sbjct 61 GRTEGNGIWMRPEAVPGFRRLTDAIHAEGAAVSAQIGHAGPVANAKSNKAKALAPVRFFN 120 Query 131 PIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRDD 190 PI MRFA+KATREDID+V+A HA+AARLA++AGFDAVEIHLGHNYLAS+FLSPL+NRRDD Sbjct 121 PIGMRFAKKATREDIDEVIAGHANAARLAIEAGFDAVEIHLGHNYLASSFLSPLINRRDD 180 Query 191 EFGGSLQNRAKVARGLVMAVRRAVRQQ---VAVTAKLNMTDGIRGGITVDEALTTARWLQ 247 EFGGSLQNRAKVARG+VMAVRRAV ++ +AVTAKLNM DG+RGGI+ +E+LTTA+WL+ Sbjct 181 EFGGSLQNRAKVARGMVMAVRRAVEKEGTPIAVTAKLNMADGVRGGISTEESLTTAKWLE 240 Query 248 DDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDA 307 +DGGLDAIELTAGSSLVNPMYLFRGDAP+KEFA AFKPPL WG+RMTG +F REYPYR+A Sbjct 241 EDGGLDAIELTAGSSLVNPMYLFRGDAPLKEFAGAFKPPLSWGMRMTGKKFLREYPYREA 300 Query 308 YLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEG 367 YLLR+A+LFR EL +PLILLGGIT R TMDLAMAEGFEFVAMARALLAEPDL+NRIAA+G Sbjct 301 YLLRDAKLFRNELKMPLILLGGITTRETMDLAMAEGFEFVAMARALLAEPDLINRIAADG 360 Query 368 S--QVRSACTHCNQCMATIYRRTHCVVTGAP 396 + QV SACTHCNQCM TIY RTHCVVTGAP Sbjct 361 ARHQVHSACTHCNQCMPTIYTRTHCVVTGAP 391 >gi|296168834|ref|ZP_06850507.1| oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896493|gb|EFG76142.1| oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=405 Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/393 (83%), Positives = 363/393 (93%), Gaps = 5/393 (1%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PDVF+PAKLGP+TLRNR IK+ATFEARTPD LVTDDLIEYHRLPAAGGV MTTVAYCAVS Sbjct 5 PDVFSPAKLGPITLRNRTIKSATFEARTPDTLVTDDLIEYHRLPAAGGVGMTTVAYCAVS 64 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 PGGRT GN IWMRP AVPG RRLT+AIHAEGAA+SAQIGHAGPVA+A+SN+A ALAPVRF Sbjct 65 PGGRTEGNGIWMRPEAVPGFRRLTDAIHAEGAAVSAQIGHAGPVANAKSNKARALAPVRF 124 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 FNPI MRFA+KATR+DI+DV+ HA+AARLA++AGFDAVEIHLGHNY AS+FLSPL+NRR Sbjct 125 FNPIGMRFAKKATRDDINDVIEGHANAARLAIEAGFDAVEIHLGHNYFASSFLSPLINRR 184 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQ---VAVTAKLNMTDGIRGGITVDEALTTARW 245 DDEFGGSLQNRAKVARG+VMAVRRAV ++ +AVTAKLNM+DG+RGGI+ +E+LTTA+W Sbjct 185 DDEFGGSLQNRAKVARGMVMAVRRAVEKEGTPIAVTAKLNMSDGVRGGISTEESLTTAKW 244 Query 246 LQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYR 305 LQDDGGLDAIELTAGSSLVNPMYLF GDAP+KEFAAAFKPPL WG+RMTG +F REYPYR Sbjct 245 LQDDGGLDAIELTAGSSLVNPMYLFHGDAPLKEFAAAFKPPLSWGMRMTGKKFLREYPYR 304 Query 306 DAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAA 365 +AYLLR A+LFRAELT+PLILLGGITNR TMDLAMAEGF+FVAM RALLAEPDL+NR+ A Sbjct 305 EAYLLRHAKLFRAELTMPLILLGGITNRDTMDLAMAEGFQFVAMGRALLAEPDLINRLVA 364 Query 366 EGS--QVRSACTHCNQCMATIYRRTHCVVTGAP 396 +G+ VRSACTHCN+CMATIY RT CVVTGAP Sbjct 365 DGAAHSVRSACTHCNKCMATIYTRTRCVVTGAP 397 >gi|118466821|ref|YP_883460.1| oxidoreductase, FAD/FMN-binding superfamily protein [Mycobacterium avium 104] gi|118168108|gb|ABK69005.1| oxidoreductase, FAD/FMN-binding superfamily protein [Mycobacterium avium 104] Length=405 Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/393 (85%), Positives = 369/393 (94%), Gaps = 5/393 (1%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PDVF+PAKLGP+TLRNR+IK+ATFEARTPDALVTDDLIEYHRLPAAGGV MTTVAYCAVS Sbjct 5 PDVFSPAKLGPITLRNRIIKSATFEARTPDALVTDDLIEYHRLPAAGGVGMTTVAYCAVS 64 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 PGGRT GN IWMRP AVPG RRLT+AIHAEGAA+SAQIGHAGPVA+ARSN+A ALAPVRF Sbjct 65 PGGRTEGNGIWMRPEAVPGFRRLTDAIHAEGAAVSAQIGHAGPVANARSNKAHALAPVRF 124 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 FNPI MRFA+KATREDID+V+AAHA+AARLA++AGFDAVEIHLGHNYLAS+FLSPL+NRR Sbjct 125 FNPIGMRFAKKATREDIDEVIAAHANAARLAIEAGFDAVEIHLGHNYLASSFLSPLINRR 184 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQ---VAVTAKLNMTDGIRGGITVDEALTTARW 245 +DEFGGSLQNRAKVARG+VMAVRRAV ++ +AVTAKLNM DG+RGGI+ +E+LTTA+W Sbjct 185 NDEFGGSLQNRAKVARGMVMAVRRAVEKEGTPIAVTAKLNMADGVRGGISTEESLTTAKW 244 Query 246 LQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYR 305 L+ DGGLDAIELTAGSSLVNPMYLFRGDAP+KEFA AFKPPLRWG+RMTG +F REYPYR Sbjct 245 LESDGGLDAIELTAGSSLVNPMYLFRGDAPLKEFAGAFKPPLRWGMRMTGKKFLREYPYR 304 Query 306 DAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAA 365 +AYLLR+A+LFRAEL +PLILLGGITNR TMDLAMAEGFEFVAMARALLAEPDL+NRIAA Sbjct 305 EAYLLRDAKLFRAELKMPLILLGGITNRETMDLAMAEGFEFVAMARALLAEPDLINRIAA 364 Query 366 EGS--QVRSACTHCNQCMATIYRRTHCVVTGAP 396 +G+ +V SACTHCNQCM TIY RTHCVVTGAP Sbjct 365 DGAAHRVHSACTHCNQCMPTIYSRTHCVVTGAP 397 >gi|41409562|ref|NP_962398.1| hypothetical protein MAP3464 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398393|gb|AAS06014.1| hypothetical protein MAP_3464 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336459684|gb|EGO38618.1| NADH:flavin oxidoreductase [Mycobacterium avium subsp. paratuberculosis S397] Length=405 Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/393 (84%), Positives = 368/393 (94%), Gaps = 5/393 (1%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PDVF+PAKLGP+TLRNR+IK+ATFEARTPDALVTDDLIEYHRLPA GGV MTTVAYCAVS Sbjct 5 PDVFSPAKLGPITLRNRIIKSATFEARTPDALVTDDLIEYHRLPAVGGVGMTTVAYCAVS 64 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 PGGRT GN IWMRP AVPG RRLT+AIHAEGAA+SAQIGHAGPVA+ARSN+A ALAPVRF Sbjct 65 PGGRTEGNGIWMRPEAVPGFRRLTDAIHAEGAAVSAQIGHAGPVANARSNKAQALAPVRF 124 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 FNPI MRFA+KATR+DID+V+AAHA+AARLA++AGFDAVEIHLGHNYLAS+FLSPL+NRR Sbjct 125 FNPIGMRFAKKATRDDIDEVIAAHANAARLAIEAGFDAVEIHLGHNYLASSFLSPLINRR 184 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQ---VAVTAKLNMTDGIRGGITVDEALTTARW 245 +DEFGGSLQNRAKVARG+VMAVRRAV ++ +AVTAKLNM DG+RGGI+ +E+LTTA+W Sbjct 185 NDEFGGSLQNRAKVARGMVMAVRRAVEKEGTPIAVTAKLNMADGVRGGISTEESLTTAKW 244 Query 246 LQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYR 305 L+ DGGLDAIELTAGSSLVNPMYLFRGDAP+KEFA AFKPPLRWG+RMTG +F REYPYR Sbjct 245 LESDGGLDAIELTAGSSLVNPMYLFRGDAPLKEFAGAFKPPLRWGMRMTGKKFLREYPYR 304 Query 306 DAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAA 365 DAYLLR+A+LFRAEL +PLILLGGITNR TMDLAMAEGFEFVAMARALLAEPDL+NRIAA Sbjct 305 DAYLLRDAKLFRAELKMPLILLGGITNRETMDLAMAEGFEFVAMARALLAEPDLINRIAA 364 Query 366 EGS--QVRSACTHCNQCMATIYRRTHCVVTGAP 396 +G+ +V SACTHCNQCM TIY RTHCVVTGAP Sbjct 365 DGAAHRVHSACTHCNQCMPTIYSRTHCVVTGAP 397 >gi|183981197|ref|YP_001849488.1| oxidoreductase [Mycobacterium marinum M] gi|183174523|gb|ACC39633.1| oxidoreductase [Mycobacterium marinum M] Length=397 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/392 (85%), Positives = 366/392 (94%), Gaps = 4/392 (1%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PDV +PA+LGPLTLRNRVIKAATFEARTP+ALVTDDLIEYHR PAAGG+AMTTVAYCAVS Sbjct 5 PDVLSPAQLGPLTLRNRVIKAATFEARTPNALVTDDLIEYHRQPAAGGIAMTTVAYCAVS 64 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 PGGRT G QIWMR AVPGLRRLTEAIHAEGAA+SAQIGHAGPVADARSN+ATALAPVRF Sbjct 65 PGGRTSGEQIWMRREAVPGLRRLTEAIHAEGAAVSAQIGHAGPVADARSNKATALAPVRF 124 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 FNPIAMRFA++ATR+DIDDVLAAHA+AARLAV+AGFDAVEIHLGHNYLAS+FLSPL+NRR Sbjct 125 FNPIAMRFAKRATRDDIDDVLAAHANAARLAVEAGFDAVEIHLGHNYLASSFLSPLINRR 184 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQ----QVAVTAKLNMTDGIRGGITVDEALTTAR 244 DEFGGSL+NRAKVARGLV AVR A+ + VAVTAKLNM DG+RGGI+ +E+L TA+ Sbjct 185 ADEFGGSLENRAKVARGLVRAVRGALDKDGISHVAVTAKLNMADGVRGGISTEESLRTAK 244 Query 245 WLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPY 304 WL++DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPP+RWG+RM G +F REYPY Sbjct 245 WLEEDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPMRWGVRMMGKKFLREYPY 304 Query 305 RDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIA 364 RDAYLLR+ARLFR+EL++PLILLGGITNR TMDLAMAEGFEFVAMARALLAEPDL+NRIA Sbjct 305 RDAYLLRDARLFRSELSMPLILLGGITNRETMDLAMAEGFEFVAMARALLAEPDLINRIA 364 Query 365 AEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 396 AEG++V SACTHCNQCM TIY RT CVVTGAP Sbjct 365 AEGNRVHSACTHCNQCMPTIYSRTRCVVTGAP 396 >gi|289555637|ref|ZP_06444847.1| LOW QUALITY PROTEIN: oxidoreductase [Mycobacterium tuberculosis KZN 605] gi|289440269|gb|EFD22762.1| LOW QUALITY PROTEIN: oxidoreductase [Mycobacterium tuberculosis KZN 605] Length=337 Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/328 (100%), Positives = 328/328 (100%), Gaps = 0/328 (0%) Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF Sbjct 10 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 69 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR Sbjct 70 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 129 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQD 248 DDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQD Sbjct 130 DDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQD 189 Query 249 DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAY 308 DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAY Sbjct 190 DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAY 249 Query 309 LLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGS 368 LLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGS Sbjct 250 LLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGS 309 Query 369 QVRSACTHCNQCMATIYRRTHCVVTGAP 396 QVRSACTHCNQCMATIYRRTHCVVTGAP Sbjct 310 QVRSACTHCNQCMATIYRRTHCVVTGAP 337 >gi|333991835|ref|YP_004524449.1| oxidoreductase [Mycobacterium sp. JDM601] gi|333487803|gb|AEF37195.1| oxidoreductase [Mycobacterium sp. JDM601] Length=399 Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/393 (83%), Positives = 355/393 (91%), Gaps = 5/393 (1%) Query 8 APDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAV 67 APDVF+PAKLGP+TLRNRVIKAATFE RTPDALV+DDLI YHRLPAAGGV MTTVAYCAV Sbjct 4 APDVFSPAKLGPITLRNRVIKAATFENRTPDALVSDDLITYHRLPAAGGVGMTTVAYCAV 63 Query 68 SPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVR 127 S GGRT + +WMRP A+PGLRRLTEA+HAEGAA+SAQIGHAGPVADARSN+A ALAPVR Sbjct 64 SRGGRTSDDGLWMRPEALPGLRRLTEAVHAEGAAVSAQIGHAGPVADARSNKARALAPVR 123 Query 128 FFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNR 187 FFNPI MRFA+KATR+DID V+A HA AAR AVDAGFDAVEIHLGHNYLAS+FLSPL+NR Sbjct 124 FFNPIGMRFAKKATRDDIDAVIAQHADAARCAVDAGFDAVEIHLGHNYLASSFLSPLINR 183 Query 188 RDDEFGGSLQNRAKVARGLVMAVRRAVRQ----QVAVTAKLNMTDGIRGGITVDEALTTA 243 R DEFGGSL NRAKVARG+V AVR+AV + Q+AVTAKLNM+DG+RGGI++DE+LTTA Sbjct 184 RSDEFGGSLGNRAKVARGIVQAVRQAVEKDGAGQIAVTAKLNMSDGVRGGISLDESLTTA 243 Query 244 RWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYP 303 +WLQDDGGLDA+ELTAGSSLVNPMYLFRG APVKEFA F PPLRWG+RMTG++F REYP Sbjct 244 KWLQDDGGLDALELTAGSSLVNPMYLFRGHAPVKEFANVFPPPLRWGMRMTGNKFLREYP 303 Query 304 YRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRI 363 Y DAYLL +ARLFRAEL++PLILLGGITNR TMD AMAEGFEFVAMARALLAEPDLVNRI Sbjct 304 YHDAYLLDDARLFRAELSLPLILLGGITNRETMDQAMAEGFEFVAMARALLAEPDLVNRI 363 Query 364 AAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 396 AAE + V S C HCNQCM TIY RTHCVVTGAP Sbjct 364 AAEPATV-SECIHCNQCMPTIYERTHCVVTGAP 395 >gi|120402556|ref|YP_952385.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium vanbaalenii PYR-1] gi|119955374|gb|ABM12379.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium vanbaalenii PYR-1] Length=402 Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust. Identities = 308/389 (80%), Positives = 353/389 (91%), Gaps = 1/389 (0%) Query 8 APDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAV 67 APDVF+PAKLGPLTLRNR+IKAATFEA TPDALVT+DLI YHRLPAAGGV MTTVAYCAV Sbjct 8 APDVFSPAKLGPLTLRNRIIKAATFEASTPDALVTEDLITYHRLPAAGGVGMTTVAYCAV 67 Query 68 SPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVR 127 +PGGRT G Q+WMRP AVPGLRRLT+AIHAEGAAISAQIGHAGPVA+AR+N+A ALAPVR Sbjct 68 APGGRTDGWQLWMRPEAVPGLRRLTDAIHAEGAAISAQIGHAGPVANARTNKAQALAPVR 127 Query 128 FFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNR 187 FFNP++MRFA+KATREDI +V AHA+AARLA+D+GFDAVEIHLGHNYLASAFLSPL+NR Sbjct 128 FFNPLSMRFAKKATREDIAEVTEAHANAARLAIDSGFDAVEIHLGHNYLASAFLSPLINR 187 Query 188 RDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQ 247 R DEFGGSL+NRAKVARG+V+AVRRAV Q+AVTAKLNM+DG+RGGI ++E+L TA+WL+ Sbjct 188 RTDEFGGSLENRAKVARGVVLAVRRAVGDQIAVTAKLNMSDGVRGGIPLEESLQTAKWLE 247 Query 248 DDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDA 307 +DGGLDA+ELTAGSSL+NPM+LFRG APVKEFA AFKPPL WGIRMTG +F REYPY++A Sbjct 248 EDGGLDALELTAGSSLLNPMFLFRGGAPVKEFAGAFKPPLSWGIRMTGKKFMREYPYQEA 307 Query 308 YLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEG 367 YL+R+A+ FR EL +PLILLGGITNR TMD AMAEGF+FVAM RALLAEPDL+NRI A+ Sbjct 308 YLMRDAKKFRDELKLPLILLGGITNRDTMDRAMAEGFDFVAMGRALLAEPDLLNRIQAD- 366 Query 368 SQVRSACTHCNQCMATIYRRTHCVVTGAP 396 S V+S C HCN CM TIY T+CV TG+P Sbjct 367 SSVKSICDHCNLCMPTIYSHTYCVRTGSP 395 >gi|108798174|ref|YP_638371.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium sp. MCS] gi|119867270|ref|YP_937222.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium sp. KMS] gi|108768593|gb|ABG07315.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium sp. MCS] gi|119693359|gb|ABL90432.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium sp. KMS] Length=401 Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/390 (81%), Positives = 355/390 (92%), Gaps = 2/390 (0%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PDVF PAKLGP+TLRNR+IKAATFEA TP+ALVTDDLI YHRLPAAGGV MTTVAYCAV+ Sbjct 5 PDVFTPAKLGPVTLRNRIIKAATFEAATPNALVTDDLIHYHRLPAAGGVGMTTVAYCAVA 64 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 PGGRT G QIWMRP A+PGLRRLT+A+HAEGAAISAQIGHAGPVA++R+N+A ALAPVRF Sbjct 65 PGGRTDGWQIWMRPEAIPGLRRLTDAVHAEGAAISAQIGHAGPVANSRTNKAKALAPVRF 124 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 FNP++MRFA+KATREDI +V AAHA+AARLA+D+GFDAVE+HLGHNYLAS+FLSPL+N+R Sbjct 125 FNPLSMRFAKKATREDIAEVTAAHANAARLAIDSGFDAVEVHLGHNYLASSFLSPLINKR 184 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQD 248 DEFGGSL+NRAKVARG+V AVR AV Q+AVTAKLNMTDG+R GI ++E+L TA+WL++ Sbjct 185 RDEFGGSLENRAKVARGVVRAVRDAVGNQIAVTAKLNMTDGVRAGIPLEESLQTAKWLEE 244 Query 249 DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAY 308 DGGLDA+ELTAGSSLVNP+YLF GDAPVKEFA AFKPPL WGIRMTG +FFREYPYR+A+ Sbjct 245 DGGLDALELTAGSSLVNPLYLFHGDAPVKEFAGAFKPPLSWGIRMTGKKFFREYPYREAF 304 Query 309 LLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGS 368 LL +AR FRAELT+PLILLGGITNR TMDLAMAEGFEFVAM RALLAEPDL+NRI +G Sbjct 305 LLDKARKFRAELTMPLILLGGITNRETMDLAMAEGFEFVAMGRALLAEPDLINRIKEDGG 364 Query 369 --QVRSACTHCNQCMATIYRRTHCVVTGAP 396 VRS CTHCN+CMATIY THCVVTGAP Sbjct 365 AHSVRSLCTHCNKCMATIYSHTHCVVTGAP 394 >gi|126433832|ref|YP_001069523.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium sp. JLS] gi|126233632|gb|ABN97032.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium sp. JLS] Length=405 Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/394 (80%), Positives = 357/394 (91%), Gaps = 6/394 (1%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PDVF PAKLGP+TLRNR+IKAATFEA TP+ALVTDDLI YHRLPAAGGV MTTVAYCAV+ Sbjct 5 PDVFTPAKLGPVTLRNRIIKAATFEAATPNALVTDDLIHYHRLPAAGGVGMTTVAYCAVA 64 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 PGGRT G QIWMRP A+PGLRRLT+A+HAEGAAISAQIGHAGPVA++R+N+A ALAPVRF Sbjct 65 PGGRTDGWQIWMRPEAIPGLRRLTDAVHAEGAAISAQIGHAGPVANSRTNKAKALAPVRF 124 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 FNP++MRFA+KATREDI +V AAHA+AARLA+D+GFDAVE+HLGHNYLAS+FLSPL+N+R Sbjct 125 FNPLSMRFAKKATREDIAEVTAAHANAARLAIDSGFDAVEVHLGHNYLASSFLSPLINKR 184 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQ----QVAVTAKLNMTDGIRGGITVDEALTTAR 244 DEFGGSL+NRAKVARG+V AVR AV + Q+AVTAKLNMTDG+R GI ++E+L TA+ Sbjct 185 RDEFGGSLENRAKVARGVVRAVRDAVDKYGANQIAVTAKLNMTDGVRAGIPLEESLQTAK 244 Query 245 WLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPY 304 WL++DGGLDA+ELTAGSSLVNP+YLF GDAPVKEFA AFKPPL WGIRMTG +FFREYPY Sbjct 245 WLEEDGGLDALELTAGSSLVNPLYLFHGDAPVKEFAGAFKPPLSWGIRMTGKKFFREYPY 304 Query 305 RDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIA 364 R+A+LL +AR FRAELT+PLILLGGITNR TMDLAMAEGFEFVAM RALLAEPDL+NRI Sbjct 305 REAFLLDKARKFRAELTMPLILLGGITNRETMDLAMAEGFEFVAMGRALLAEPDLINRIK 364 Query 365 AEGS--QVRSACTHCNQCMATIYRRTHCVVTGAP 396 A+G VRS CTHCN+CMATIY THCVVTGAP Sbjct 365 ADGGAHSVRSQCTHCNKCMATIYSHTHCVVTGAP 398 >gi|145225456|ref|YP_001136134.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium gilvum PYR-GCK] gi|145217942|gb|ABP47346.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium gilvum PYR-GCK] Length=410 Score = 628 bits (1620), Expect = 4e-178, Method: Compositional matrix adjust. Identities = 297/387 (77%), Positives = 348/387 (90%), Gaps = 1/387 (0%) Query 10 DVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSP 69 DVF+PAKLGPLTLRNR+IKAATFEA TP+ALVT+DLI YHRLPAAGGV MTTVAYCAV+P Sbjct 18 DVFSPAKLGPLTLRNRIIKAATFEASTPNALVTEDLITYHRLPAAGGVGMTTVAYCAVAP 77 Query 70 GGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFF 129 GGRT G Q+WMRP AVPGLRRLT+A+HAEGAAISAQIGHAGPVA+AR+N+ATALAPVRFF Sbjct 78 GGRTDGWQLWMRPEAVPGLRRLTDAVHAEGAAISAQIGHAGPVANARTNKATALAPVRFF 137 Query 130 NPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRD 189 NP++MRFA+KAT +DI +V AHA+AARLA+D+GFDAVEIHLGHNYLAS+FLSPL+NRR Sbjct 138 NPLSMRFARKATADDIREVTEAHANAARLAIDSGFDAVEIHLGHNYLASSFLSPLINRRT 197 Query 190 DEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDD 249 DEFGGSL NRAKVARG V+AV+ AV ++AVTAKLNM+DG+RGGI+++E+L TA+WL++D Sbjct 198 DEFGGSLANRAKVARGAVLAVKEAVGDRIAVTAKLNMSDGVRGGISIEESLQTAKWLEED 257 Query 250 GGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYL 309 GGLDAIELTAGSSL+NPM+LFRG AP+KEFA FKPPL WG+RMTG +F REYPY +AYL Sbjct 258 GGLDAIELTAGSSLLNPMFLFRGGAPIKEFARNFKPPLSWGMRMTGKKFMREYPYEEAYL 317 Query 310 LREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQ 369 +R+A+ FR ELT+P+ILLGGITNR TMD AMAEGF+FVAM RALLAEPDL+NRI A+ S Sbjct 318 MRDAKKFRDELTMPIILLGGITNRETMDRAMAEGFDFVAMGRALLAEPDLLNRIRAD-SS 376 Query 370 VRSACTHCNQCMATIYRRTHCVVTGAP 396 V+S C HCN CM TIY T+CV TG+P Sbjct 377 VKSICDHCNLCMPTIYNHTYCVRTGSP 403 >gi|315445809|ref|YP_004078688.1| NADH:flavin oxidoreductase [Mycobacterium sp. Spyr1] gi|315264112|gb|ADU00854.1| NADH:flavin oxidoreductase [Mycobacterium sp. Spyr1] Length=398 Score = 628 bits (1619), Expect = 6e-178, Method: Compositional matrix adjust. Identities = 297/387 (77%), Positives = 348/387 (90%), Gaps = 1/387 (0%) Query 10 DVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSP 69 DVF+PAKLGPLTLRNR+IKAATFEA TP+ALVT+DLI YHRLPAAGGV MTTVAYCAV+P Sbjct 6 DVFSPAKLGPLTLRNRIIKAATFEASTPNALVTEDLITYHRLPAAGGVGMTTVAYCAVAP 65 Query 70 GGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFF 129 GGRT G Q+WMRP AVPGLRRLT+A+HAEGAAISAQIGHAGPVA+AR+N+ATALAPVRFF Sbjct 66 GGRTDGWQLWMRPEAVPGLRRLTDAVHAEGAAISAQIGHAGPVANARTNKATALAPVRFF 125 Query 130 NPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRD 189 NP++MRFA+KAT +DI +V AHA+AARLA+D+GFDAVEIHLGHNYLAS+FLSPL+NRR Sbjct 126 NPLSMRFARKATADDIREVTEAHANAARLAIDSGFDAVEIHLGHNYLASSFLSPLINRRT 185 Query 190 DEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDD 249 DEFGGSL NRAKVARG V+AV+ AV ++AVTAKLNM+DG+RGGI+++E+L TA+WL++D Sbjct 186 DEFGGSLANRAKVARGAVLAVKEAVGDRIAVTAKLNMSDGVRGGISIEESLQTAKWLEED 245 Query 250 GGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYL 309 GGLDAIELTAGSSL+NPM+LFRG AP+KEFA FKPPL WG+RMTG +F REYPY +AYL Sbjct 246 GGLDAIELTAGSSLLNPMFLFRGGAPIKEFARNFKPPLSWGMRMTGKKFMREYPYEEAYL 305 Query 310 LREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQ 369 +R+A+ FR ELT+P+ILLGGITNR TMD AMAEGF+FVAM RALLAEPDL+NRI A+ S Sbjct 306 MRDAKKFRDELTMPIILLGGITNRETMDRAMAEGFDFVAMGRALLAEPDLLNRIRAD-SS 364 Query 370 VRSACTHCNQCMATIYRRTHCVVTGAP 396 V+S C HCN CM TIY T+CV TG+P Sbjct 365 VKSICDHCNLCMPTIYNHTYCVRTGSP 391 >gi|118473868|ref|YP_886022.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium smegmatis str. MC2 155] gi|118175155|gb|ABK76051.1| NADH:flavin oxidoreductase/nadh oxidase [Mycobacterium smegmatis str. MC2 155] Length=406 Score = 622 bits (1605), Expect = 2e-176, Method: Compositional matrix adjust. Identities = 309/392 (79%), Positives = 351/392 (90%), Gaps = 5/392 (1%) Query 10 DVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSP 69 DVF+ AKLGP+TLRNR+IKAATFEA TPDALVT+DLI YHRLPAAGGV MTTVAYCAV+P Sbjct 10 DVFSEAKLGPITLRNRIIKAATFEASTPDALVTEDLINYHRLPAAGGVGMTTVAYCAVAP 69 Query 70 GGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFF 129 GGRT G QIWMRP AVPGL++LTEA+HAEGAAISAQIGHAGPVA+AR+N+A ALAPVRFF Sbjct 70 GGRTDGWQIWMRPEAVPGLQKLTEAVHAEGAAISAQIGHAGPVANARTNKAKALAPVRFF 129 Query 130 NPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRD 189 NP++MRFA+KAT +DI +V AAHA+AARLA+D+GFDAVEIHLGHNYLAS+FLSPL+NRR Sbjct 130 NPLSMRFAKKATIDDIREVTAAHANAARLAIDSGFDAVEIHLGHNYLASSFLSPLINRRI 189 Query 190 DEFGGSLQNRAKVARGLVMAVRRAVRQ---QVAVTAKLNMTDGIRGGITVDEALTTARWL 246 DEFGGSL+NRAKVARG+V AVR AV + +AVTAKLNM+DGIRGGI+++E+L TA+WL Sbjct 190 DEFGGSLENRAKVARGVVRAVRDAVDKAGGTIAVTAKLNMSDGIRGGISLEESLQTAKWL 249 Query 247 QDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRD 306 ++DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFA AFKPP+ WG+R G F REYPYR+ Sbjct 250 EEDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAGAFKPPISWGMRTVGKGFLREYPYRE 309 Query 307 AYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAE 366 AYLLREA+ FRAEL +PLILLGGITNR TMD AMAEGFEFVAM RALLAEPDL+NRI A+ Sbjct 310 AYLLREAKQFRAELKLPLILLGGITNRDTMDQAMAEGFEFVAMGRALLAEPDLINRIKAD 369 Query 367 GS--QVRSACTHCNQCMATIYRRTHCVVTGAP 396 G VRS CTHCN+CM TIY THCV+TGAP Sbjct 370 GDAHSVRSLCTHCNKCMPTIYTHTHCVLTGAP 401 >gi|169630773|ref|YP_001704422.1| oxidoreductase [Mycobacterium abscessus ATCC 19977] gi|169242740|emb|CAM63768.1| Possible oxidoreductase [Mycobacterium abscessus] Length=392 Score = 563 bits (1451), Expect = 2e-158, Method: Compositional matrix adjust. Identities = 276/385 (72%), Positives = 324/385 (85%), Gaps = 1/385 (0%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PDV PA+LGP+TLRNR IKAATFEA +PDA VTDDLIEYHR PA GGV MTTVAYCAV+ Sbjct 9 PDVLAPARLGPITLRNRTIKAATFEAASPDAFVTDDLIEYHRRPALGGVGMTTVAYCAVA 68 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 P GRT Q+WMR A+PGLRRLT+AIH GAA+SAQIGHAGPVA+ARSN + AL+P+RF Sbjct 69 PEGRTEYGQVWMREEAIPGLRRLTDAIHDTGAAVSAQIGHAGPVANARSNGSPALSPIRF 128 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 FNP+ M+FA++A+ DID V+AAHA+AARLA++AGFDAVEIHLGH Y S+FLSPL NRR Sbjct 129 FNPLGMKFARRASASDIDGVIAAHANAARLAIEAGFDAVEIHLGHGYFVSSFLSPLFNRR 188 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQD 248 DE+GGSL NRAKVAR +V AVR+ ++AVTAKL MTDGIRGGI ++E+L TA WLQ+ Sbjct 189 GDEYGGSLANRAKVARAVVQAVRKVAGSRLAVTAKLTMTDGIRGGIPIEESLQTATWLQE 248 Query 249 DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAY 308 DGGLDA+ELTAGSSLVNPMYLFRGD P++E A F P+ WG+R+TG +FFR YPY DA+ Sbjct 249 DGGLDALELTAGSSLVNPMYLFRGDVPIRELAKGFPKPMGWGVRLTGKKFFRSYPYHDAF 308 Query 309 LLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGS 368 LL +AR FRAEL IPLILLGGIT +MDLAMAEGFEFVAM RALLA+PDLVNR+AA+ + Sbjct 309 LLEDARRFRAELDIPLILLGGITGGESMDLAMAEGFEFVAMGRALLADPDLVNRVAADRA 368 Query 369 QVRSACTHCNQCMATIYRRTHCVVT 393 S CTHCNQCMATI+ +THCV+T Sbjct 369 S-HSRCTHCNQCMATIFSKTHCVLT 392 >gi|226362184|ref|YP_002779962.1| oxidoreductase [Rhodococcus opacus B4] gi|226240669|dbj|BAH51017.1| putative oxidoreductase [Rhodococcus opacus B4] Length=389 Score = 511 bits (1316), Expect = 8e-143, Method: Compositional matrix adjust. Identities = 249/384 (65%), Positives = 299/384 (78%), Gaps = 1/384 (0%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PDVF PA LGPLTLRNR+IK+ATFE RTPDALVTD+LIE+HR PAAGGV M+TVAYCAV+ Sbjct 5 PDVFAPATLGPLTLRNRIIKSATFEGRTPDALVTDELIEFHRRPAAGGVGMSTVAYCAVA 64 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 P GRT Q+WMRP AVPGLRRLT+AIHAEGAA SAQ+GHAGPVA+ +S ALAP R Sbjct 65 PEGRTERGQLWMRPDAVPGLRRLTDAIHAEGAAASAQLGHAGPVANEKSTGLPALAPSRS 124 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 FNP++MR + AT DI + AH AAR+AV++GFDAVEIH GHNY ASAFLSP LNRR Sbjct 125 FNPLSMRMIRSATAADIARITTAHGTAARIAVESGFDAVEIHFGHNYFASAFLSPKLNRR 184 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQD 248 D +GGSL+NRA+V R + VR AV +VA+ AKLNM DG+ GG +DEA+ AR L+ Sbjct 185 TDSYGGSLENRARVVRDVARTVRDAVGGRVAILAKLNMDDGVPGGFWLDEAIQVARLLER 244 Query 249 DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAY 308 DG +DA+ELT GSSL+NPMYLF+GDAPV+EFAAA P+R G+++ G YPYRD + Sbjct 245 DGSVDALELTMGSSLLNPMYLFKGDAPVREFAAAMPQPVRLGVQLVGKSMIHTYPYRDLF 304 Query 309 LLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGS 368 +L AR RA +T+PL+LLGG+T+R MD AMAEGFEFVAMARALL EPDLVNRI +E Sbjct 305 MLEHARQIRAAVTLPLVLLGGVTDRAGMDTAMAEGFEFVAMARALLREPDLVNRIRSE-P 363 Query 369 QVRSACTHCNQCMATIYRRTHCVV 392 + +S C HCN+CM TI+ CV+ Sbjct 364 RTQSLCIHCNKCMPTIFSGARCVL 387 >gi|229493009|ref|ZP_04386804.1| oxidoreductase [Rhodococcus erythropolis SK121] gi|229320039|gb|EEN85865.1| oxidoreductase [Rhodococcus erythropolis SK121] Length=391 Score = 511 bits (1316), Expect = 8e-143, Method: Compositional matrix adjust. Identities = 244/386 (64%), Positives = 300/386 (78%), Gaps = 1/386 (0%) Query 8 APDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAV 67 APDV PAKLGP+TLRNR+IK+ATFE +TPDALVTD+LIE+HR PAAGGV M+TVAYCAV Sbjct 4 APDVLAPAKLGPVTLRNRIIKSATFEGKTPDALVTDELIEFHRRPAAGGVGMSTVAYCAV 63 Query 68 SPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVR 127 +P GRT Q+WMRP A+PGLRRLT+AIHAEGAA SAQ+GHAGPVA+ +S ALAP Sbjct 64 APEGRTEYGQLWMRPDALPGLRRLTDAIHAEGAAASAQLGHAGPVANQKSTGLPALAPSS 123 Query 128 FFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNR 187 FNP++MR + AT DI + AAH AARLAV+AGFDAVEIH GHNY AS+FLSP LNR Sbjct 124 SFNPLSMRMIRTATTADITRIAAAHGSAARLAVEAGFDAVEIHFGHNYFASSFLSPKLNR 183 Query 188 RDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQ 247 R D +GGSL+NRA+V +VR AV +VA+ AKLNM DG+ GG VDEA+ A+WL+ Sbjct 184 RKDSYGGSLENRARVVLETARSVRDAVGDKVAILAKLNMDDGVPGGFWVDEAIQVAQWLE 243 Query 248 DDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDA 307 G +DA+ELT GSSL+NPMYLF+GDAP++EFAAA P+R G+++ G YPY+ Sbjct 244 ASGSVDALELTMGSSLLNPMYLFKGDAPIREFAAAMPQPVRLGVQLVGKSMLHTYPYKPL 303 Query 308 YLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEG 367 ++L +AR RA + +PL+LLGG+T++ MD AMAEGFEFVAMARALL EPDL+NRIAAE Sbjct 304 FMLEQARQIRAAVKLPLVLLGGVTDKAGMDTAMAEGFEFVAMARALLREPDLINRIAAE- 362 Query 368 SQVRSACTHCNQCMATIYRRTHCVVT 393 S ++S C HCN+CM TI+ CV+ Sbjct 363 SDIQSLCIHCNKCMPTIFSGARCVLV 388 >gi|226304848|ref|YP_002764806.1| oxidoreductase [Rhodococcus erythropolis PR4] gi|226183963|dbj|BAH32067.1| putative oxidoreductase [Rhodococcus erythropolis PR4] Length=390 Score = 510 bits (1314), Expect = 1e-142, Method: Compositional matrix adjust. Identities = 244/386 (64%), Positives = 299/386 (78%), Gaps = 1/386 (0%) Query 8 APDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAV 67 APDV PAKLGP+TLRNR+IK+ATFE +TPDALVTD+LIE+HR PAAGGV M+TVAYCAV Sbjct 3 APDVLAPAKLGPVTLRNRIIKSATFEGKTPDALVTDELIEFHRRPAAGGVGMSTVAYCAV 62 Query 68 SPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVR 127 +P GRT Q+WMRP A+PGLRRLT+AIHAEGAA SAQ+GHAGPVA+ +S ALAP Sbjct 63 APEGRTEYGQLWMRPDALPGLRRLTDAIHAEGAAASAQLGHAGPVANQKSTGLPALAPSS 122 Query 128 FFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNR 187 FNP++MR + AT DI + AAH AARLAV+AGFDAVEIH GHNY AS+FLSP LNR Sbjct 123 SFNPLSMRMIRTATTADITRIAAAHGSAARLAVEAGFDAVEIHFGHNYFASSFLSPKLNR 182 Query 188 RDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQ 247 R D +GGSL+NRA+V +VR AV ++A+ AKLNM DG+ GG VDEA+ A+WL+ Sbjct 183 RKDSYGGSLENRARVVLETARSVRDAVGDKIAILAKLNMDDGVPGGFWVDEAIQVAQWLE 242 Query 248 DDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDA 307 G +DA+ELT GSSL+NPMYLF+GDAP++EFAAA P+R G+++ G YPY+ Sbjct 243 ASGSVDALELTMGSSLLNPMYLFKGDAPIREFAAAMPQPVRLGVQLVGKSMLHAYPYKPL 302 Query 308 YLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEG 367 ++L EAR RA + +PL+LLGG+T++ MD AMAEGFEFVAMARALL EPDL+NRIAAE Sbjct 303 FMLEEARQIRAAVKLPLVLLGGVTDKAGMDTAMAEGFEFVAMARALLREPDLINRIAAE- 361 Query 368 SQVRSACTHCNQCMATIYRRTHCVVT 393 S +S C HCN+CM TI+ CV+ Sbjct 362 SDTQSLCIHCNKCMPTIFSGARCVLV 387 >gi|333918632|ref|YP_004492213.1| oxidoreductase [Amycolicicoccus subflavus DQS3-9A1] gi|333480853|gb|AEF39413.1| Oxidoreductase [Amycolicicoccus subflavus DQS3-9A1] Length=396 Score = 510 bits (1314), Expect = 1e-142, Method: Compositional matrix adjust. Identities = 249/384 (65%), Positives = 301/384 (79%), Gaps = 1/384 (0%) Query 10 DVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSP 69 DV PA+LGP+TLRNRVIKAATFE RTP ALVTDDLIE+HR AAGGV MTTVAYCAV+P Sbjct 3 DVLTPARLGPITLRNRVIKAATFEGRTPHALVTDDLIEFHRAVAAGGVGMTTVAYCAVAP 62 Query 70 GGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFF 129 GRT Q+WMRP AVPGL+RLT+A+H EGAA+SAQIGHAGPVA+ +S + ALAP R F Sbjct 63 EGRTQHGQLWMRPEAVPGLQRLTDAVHQEGAAVSAQIGHAGPVANEKSTRLRALAPSRMF 122 Query 130 NPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRD 189 +P++MR Q A+ DI ++ AHAHAAR+AVDAGFDAVEIH GHNY S+FLSP LNRR Sbjct 123 SPLSMRPVQAASIADIRRIIGAHAHAARIAVDAGFDAVEIHFGHNYFVSSFLSPRLNRRR 182 Query 190 DEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDD 249 DE+GG L NRA++AR + AVR AV +AV AKL+M DG+ GG +DEA+ A+WL D Sbjct 183 DEYGGPLPNRARLAREIAEAVRIAVGDSIAVLAKLSMDDGVPGGFWLDEAIEVAQWLDAD 242 Query 250 GGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYL 309 G LDA+ELTAGSSL+NPMYLFRGDAPV EFAA P+R GIR+ G F + YPYRD YL Sbjct 243 GHLDALELTAGSSLLNPMYLFRGDAPVAEFAAVMPQPIRLGIRLGGRAFLKSYPYRDLYL 302 Query 310 LREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQ 369 L +A+ RA + +PL+LLGG+T+R +MD AMAEGF+FVA+ARALL EP L+NR+ E + Sbjct 303 LEQAKQVRAAVWMPLVLLGGVTDRASMDTAMAEGFDFVAIARALLREPHLINRLKEEPA- 361 Query 370 VRSACTHCNQCMATIYRRTHCVVT 393 +S C HCN+CM TI+ RT CV+ Sbjct 362 AQSLCIHCNKCMPTIFTRTRCVLN 385 >gi|111020034|ref|YP_703006.1| NADH-dependent flavin oxidoreductase [Rhodococcus jostii RHA1] gi|110819564|gb|ABG94848.1| probable NADH-dependent flavin oxidoreductase [Rhodococcus jostii RHA1] Length=389 Score = 505 bits (1301), Expect = 4e-141, Method: Compositional matrix adjust. Identities = 247/384 (65%), Positives = 298/384 (78%), Gaps = 1/384 (0%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PDVF A LGP+TLRNRVIK+ATFE RTPDALVTD+LIE+HR PAAGGV M+TVAYCAV+ Sbjct 5 PDVFATATLGPITLRNRVIKSATFEGRTPDALVTDELIEFHRRPAAGGVGMSTVAYCAVA 64 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 P GRT Q+WMRP AVPGLRRLT+AIHAEGAA SAQ+GHAGPVA+ +S ALAP R Sbjct 65 PEGRTERGQLWMRPDAVPGLRRLTDAIHAEGAAASAQLGHAGPVANEKSTGLAALAPSRS 124 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 FNP++MR ++AT DI + AAH AAR+AV++GFDAVEIH GHNY AS+FLSP LNRR Sbjct 125 FNPLSMRMIRRATTADITRITAAHGTAARIAVESGFDAVEIHFGHNYFASSFLSPKLNRR 184 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQD 248 D +GGSL+NRA+V R + VR AV +VA+ AKLNM DG+ GG +DEA+ A L+ Sbjct 185 ADIYGGSLENRARVVRDVARTVRDAVGGRVAILAKLNMDDGVPGGFWLDEAIQVAGLLEQ 244 Query 249 DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAY 308 DG +DA+ELT GSSL+NPMYLF+GDAPV+EFAAA P+R G+++ G YPYRD + Sbjct 245 DGSVDALELTMGSSLLNPMYLFKGDAPVREFAAAMPQPVRLGVQLAGKSMIHAYPYRDLF 304 Query 309 LLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGS 368 +L AR RA +T+PL+LLGG+T+R MD AMAEGFEFVAMARALL EPDLVNRI +E Sbjct 305 MLEHARQIRAAVTLPLVLLGGVTDRAGMDTAMAEGFEFVAMARALLREPDLVNRIRSE-P 363 Query 369 QVRSACTHCNQCMATIYRRTHCVV 392 +S C HCN+CM TI+ CV+ Sbjct 364 HTQSLCIHCNKCMPTIFSGARCVL 387 >gi|325676160|ref|ZP_08155841.1| oxidoreductase [Rhodococcus equi ATCC 33707] gi|325553070|gb|EGD22751.1| oxidoreductase [Rhodococcus equi ATCC 33707] Length=399 Score = 505 bits (1300), Expect = 7e-141, Method: Compositional matrix adjust. Identities = 241/386 (63%), Positives = 295/386 (77%), Gaps = 1/386 (0%) Query 8 APDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAV 67 APDVF PAKLGP+TLRNR+IK+ATFE RTP ALVT++LIE+HR PAAGGV MTTVAYCAV Sbjct 6 APDVFAPAKLGPITLRNRIIKSATFEGRTPQALVTNELIEFHRRPAAGGVGMTTVAYCAV 65 Query 68 SPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVR 127 P GRT Q+WMRP VPGLR LT+AIHAEGAA SAQIGHAGPVA+ +SN ALAP Sbjct 66 QPEGRTERGQLWMRPEVVPGLRELTDAIHAEGAAASAQIGHAGPVANEKSNGLPALAPST 125 Query 128 FFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNR 187 F+P++M+ AT DI + AHA AAR A++ GFDAVEIH GHNY AS+FLSP LN+ Sbjct 126 SFSPLSMKRIHAATSADIARITQAHADAARFAIEGGFDAVEIHFGHNYFASSFLSPKLNK 185 Query 188 RDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQ 247 R D +GGSL+NRA++ R AVR AV ++AV AKLNM DG+ GG VDEA+ A+WL+ Sbjct 186 RKDNYGGSLENRARIVRETARAVREAVGDRIAVLAKLNMDDGVPGGFWVDEAIQVAQWLE 245 Query 248 DDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDA 307 DG LDA+ELT GSSL+NPMYLF+GDAPV++FA A P++ G+++ G F + YPY Sbjct 246 ADGSLDALELTMGSSLLNPMYLFKGDAPVRDFANAMPQPVKLGVQLVGKAFIKTYPYEPL 305 Query 308 YLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEG 367 ++L EAR RA + +PL+LLGG+T++ MD AM EGFEFVAMARALL EPDL+NRI AE Sbjct 306 FMLEEARQIRAAVKMPLVLLGGVTDKAGMDTAMDEGFEFVAMARALLREPDLINRIQAE- 364 Query 368 SQVRSACTHCNQCMATIYRRTHCVVT 393 S+ +S C HCN+CM TI+ CV+ Sbjct 365 SRTKSLCIHCNKCMPTIFSGARCVLV 390 >gi|312138456|ref|YP_004005792.1| oxidoreductase [Rhodococcus equi 103S] gi|311887795|emb|CBH47107.1| oxidoreductase [Rhodococcus equi 103S] Length=399 Score = 504 bits (1299), Expect = 7e-141, Method: Compositional matrix adjust. Identities = 241/386 (63%), Positives = 295/386 (77%), Gaps = 1/386 (0%) Query 8 APDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAV 67 APDVF PAKLGP+TLRNR+IK+ATFE RTP ALVT++LIE+HR PAAGGV MTTVAYCAV Sbjct 6 APDVFAPAKLGPITLRNRIIKSATFEGRTPQALVTNELIEFHRRPAAGGVGMTTVAYCAV 65 Query 68 SPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVR 127 P GRT Q+WMRP VPGLR LT+AIHAEGAA SAQIGHAGPVA+ +SN ALAP Sbjct 66 QPEGRTERGQLWMRPEVVPGLRELTDAIHAEGAAASAQIGHAGPVANEKSNGLPALAPST 125 Query 128 FFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNR 187 F+P++M+ AT DI + AHA AAR A++ GFDAVEIH GHNY AS+FLSP LN+ Sbjct 126 SFSPLSMKRIHAATSADIARITQAHADAARFAIEGGFDAVEIHFGHNYFASSFLSPKLNK 185 Query 188 RDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQ 247 R D +GGSL+NRA++ R AVR AV ++AV AKLNM DG+ GG VDEA+ A+WL+ Sbjct 186 RKDNYGGSLENRARIVRETARAVREAVGDRIAVLAKLNMDDGVPGGFWVDEAIQVAQWLE 245 Query 248 DDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDA 307 DG LDA+ELT GSSL+NPMYLF+GDAPV++FA A P++ G+++ G F + YPY Sbjct 246 ADGSLDALELTMGSSLLNPMYLFKGDAPVRDFANAMPQPVKLGVQLVGKAFIKAYPYEPL 305 Query 308 YLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEG 367 ++L EAR RA + +PL+LLGG+T++ MD AM EGFEFVAMARALL EPDL+NRI AE Sbjct 306 FMLEEARQIRAAVKMPLVLLGGVTDKAGMDTAMDEGFEFVAMARALLREPDLINRIQAE- 364 Query 368 SQVRSACTHCNQCMATIYRRTHCVVT 393 S+ +S C HCN+CM TI+ CV+ Sbjct 365 SRTKSLCIHCNKCMPTIFSGARCVLV 390 >gi|269128148|ref|YP_003301518.1| NADH:flavin oxidoreductase/NADH oxidase [Thermomonospora curvata DSM 43183] gi|268313106|gb|ACY99480.1| NADH:flavin oxidoreductase/NADH oxidase [Thermomonospora curvata DSM 43183] Length=387 Score = 503 bits (1294), Expect = 3e-140, Method: Compositional matrix adjust. Identities = 256/385 (67%), Positives = 302/385 (79%), Gaps = 1/385 (0%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 P++F PAKLGPLTLRNR+IKAATFE RTPDALV+DDLIE+HR AAGG AMTTVAYCAV+ Sbjct 2 PEIFEPAKLGPLTLRNRIIKAATFEGRTPDALVSDDLIEFHRAVAAGGAAMTTVAYCAVA 61 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 P GRT QI+MRP A PGL +L EA+HAEGAAISAQIGHAGPVADARSN A ALA R Sbjct 62 PEGRTERRQIYMRPEAAPGLAKLAEAVHAEGAAISAQIGHAGPVADARSNGAPALAASRR 121 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 +P+ RF Q+AT +DI + AAHA AA LA D+GFDAVE+H GHNYL S+FLSP LN+R Sbjct 122 LSPLTGRFIQQATEDDIARITAAHADAAELAADSGFDAVELHFGHNYLVSSFLSPKLNKR 181 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQD 248 D +GGS+ NRAK+AR + AVR V ++AVTAKLNM DG+RGG+T+D++L AR L+ Sbjct 182 RDGWGGSVANRAKIARRIAEAVRTRVGDRIAVTAKLNMEDGVRGGLTIDDSLQVARLLES 241 Query 249 DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAY 308 DG LDA++LTAGSSL+NPMYLFRG+APVKEFA AF PLR G+R+ G F YPY+ Y Sbjct 242 DGHLDALQLTAGSSLLNPMYLFRGEAPVKEFADAFPQPLRTGLRLFGRFFLHSYPYQPGY 301 Query 309 LLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGS 368 L A+LFR EL++PLILLGGIT+ M AM +GF+FVAM RALL EPDLV RI + S Sbjct 302 LQESAKLFRRELSMPLILLGGITDYAAMSRAMDDGFDFVAMGRALLMEPDLVKRIEQDKS 361 Query 369 QVRSACTHCNQCMATIYRRTHCVVT 393 V S C HCN+CM TIYRRT CV+ Sbjct 362 TV-SQCIHCNRCMPTIYRRTRCVLV 385 >gi|256394388|ref|YP_003115952.1| NADH:flavin oxidoreductase/NADH oxidase [Catenulispora acidiphila DSM 44928] gi|256360614|gb|ACU74111.1| NADH:flavin oxidoreductase/NADH oxidase [Catenulispora acidiphila DSM 44928] Length=415 Score = 502 bits (1292), Expect = 5e-140, Method: Compositional matrix adjust. Identities = 259/384 (68%), Positives = 302/384 (79%), Gaps = 1/384 (0%) Query 7 EAPDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCA 66 APDV PA LGP+ LRNR+IK+ATFE TPDALVTDDLI YHR PAAGGV MTTVAY A Sbjct 27 SAPDVLAPATLGPVRLRNRIIKSATFEGATPDALVTDDLIAYHRRPAAGGVGMTTVAYLA 86 Query 67 VSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPV 126 VSP GRT QI RP AVPGLR LT+A+HAEGAA++AQIGHAGPVADARSN+A AL+ Sbjct 87 VSPEGRTERRQIHWRPEAVPGLRTLTDAVHAEGAAVAAQIGHAGPVADARSNRAAALSCS 146 Query 127 RFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLN 186 NP+ R + AT DI+ + AAHA AARLA+++GFD+VEIHLGHNY ASAFLSP LN Sbjct 147 PMLNPVTFRRTRAATAADIERITAAHARAARLAIESGFDSVEIHLGHNYFASAFLSPRLN 206 Query 187 RRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWL 246 +RDD+FGGSL NRAKVA GL AVR V ++AVTAKLNM DG GG+ ++++L A+WL Sbjct 207 KRDDQFGGSLANRAKVALGLARAVRDEVGDRIAVTAKLNMEDGYPGGLRIEDSLQVAQWL 266 Query 247 QDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRD 306 Q DG LDA+ELTAGSSL+NPMYLF GD P++EFAA F P R GIR+ G +F R YPY+D Sbjct 267 QRDGTLDALELTAGSSLMNPMYLFTGDVPLREFAAQFPPLPRLGIRLFGKKFLRSYPYQD 326 Query 307 AYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAE 366 YL+ A FRAEL++PLILLGG+T R TMD AMA GF++VAMARALL EPDLVNRIAA+ Sbjct 327 TYLMERALRFRAELSLPLILLGGVTTRATMDRAMAAGFQYVAMARALLREPDLVNRIAAD 386 Query 367 GSQVRSACTHCNQCMATIYRRTHC 390 + SACTHCN+CM TIY T C Sbjct 387 AT-TPSACTHCNRCMPTIYTGTRC 409 >gi|271966837|ref|YP_003341033.1| NADH:flavin oxidoreductase/NADH oxidase [Streptosporangium roseum DSM 43021] gi|270510012|gb|ACZ88290.1| putative NADH:flavin oxidoreductase/NADH oxidase [Streptosporangium roseum DSM 43021] Length=391 Score = 495 bits (1275), Expect = 4e-138, Method: Compositional matrix adjust. Identities = 250/384 (66%), Positives = 299/384 (78%), Gaps = 1/384 (0%) Query 10 DVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSP 69 DVF PAKLGP+TLRNR+IK+ATFE RTP+ALV+DDL+E+HR AAGGV MTTVAYCAV+P Sbjct 7 DVFAPAKLGPITLRNRLIKSATFEGRTPEALVSDDLVEFHRRTAAGGVGMTTVAYCAVAP 66 Query 70 GGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFF 129 GRT QIWMR AVPGLRRL +A+HAEGAA+SAQIGHAGPVA+ SN+ ALAP R Sbjct 67 EGRTERRQIWMRAEAVPGLRRLADAVHAEGAAVSAQIGHAGPVANPASNRLPALAPTRRL 126 Query 130 NPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRD 189 NP++M + AT DI+ V+ AHA AA +A ++GFDAVEIH+GHNYLASAFLSP LN R Sbjct 127 NPMSMTMTRAATIPDIERVVRAHADAALVAAESGFDAVEIHMGHNYLASAFLSPRLNHRA 186 Query 190 DEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDD 249 D +GGSL NRA++AR + AVR AV ++A+ AKLNM DG+RGG+ ++E+L A WL++D Sbjct 187 DAYGGSLANRARMAREVARAVRDAVGDRIAILAKLNMDDGVRGGLVIEESLQVAAWLEED 246 Query 250 GGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYL 309 GGLDAIELT GSSL+NPMYLF+GD P+KEFA F P R G+R+ G R YPYRDAYL Sbjct 247 GGLDAIELTEGSSLLNPMYLFKGDVPLKEFAGVFPQPQRLGVRLLGRSLLRAYPYRDAYL 306 Query 310 LREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQ 369 L +AR FRA L +PL+LLGGIT+R TMDLAM EGFEF AM RALL EPDL RI + + Sbjct 307 LDDARRFRAALRMPLVLLGGITDRRTMDLAMREGFEFAAMGRALLMEPDLPIRIRRDRAT 366 Query 370 VRSACTHCNQCMATIYRRTHCVVT 393 S C HCN+CM TIY T C +T Sbjct 367 A-SRCVHCNKCMPTIYTGTRCALT 389 >gi|120403864|ref|YP_953693.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium vanbaalenii PYR-1] gi|119956682|gb|ABM13687.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium vanbaalenii PYR-1] Length=410 Score = 493 bits (1269), Expect = 2e-137, Method: Compositional matrix adjust. Identities = 241/388 (63%), Positives = 294/388 (76%), Gaps = 1/388 (0%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PDVF+P LGP+TLRNR+IKAATFEARTP VTD+LIEYHR PAAGGV MTTVAYCAVS Sbjct 6 PDVFDPGTLGPVTLRNRIIKAATFEARTPAGAVTDELIEYHRAPAAGGVGMTTVAYCAVS 65 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 P GRT +QI M P AVP L RLT+A+ +EGAA+ AQ+GHAGPVA+A SN A +P R Sbjct 66 PEGRTERDQILMTPEAVPALVRLTDAVRSEGAAVCAQLGHAGPVANAASNGLPAFSPSRM 125 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 F+P+AM+ ++ +I ++A HA AA LA AGFDAVE+H GHNYL S+F SPLLNRR Sbjct 126 FSPLAMKATRQPDAAEIARIVADHARAADLAGQAGFDAVELHFGHNYLVSSFFSPLLNRR 185 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQD 248 D +GGSL NRA++AR + +AVR +V Q+AVTAKLNM DG+ GG+ ++E+L RWLQD Sbjct 186 RDSYGGSLANRARLAREIAVAVRESVGDQIAVTAKLNMDDGVPGGLRLEESLQIGRWLQD 245 Query 249 DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAY 308 DG LDA++LT GSSL+NPMY FRG AP +FA F PL W + G F R+YP+ +AY Sbjct 246 DGALDALQLTVGSSLLNPMYYFRGQAPRDDFARVFPRPLNWALLTAGRFFLRQYPFEEAY 305 Query 309 LLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGS 368 LL AR FR EL++PLILLGGIT R TMD AMAEGFE+VAMARALL +P LV RI ++ + Sbjct 306 LLESARQFRHELSMPLILLGGITTRDTMDQAMAEGFEYVAMARALLRDPGLVGRIRSDPT 365 Query 369 QVRSACTHCNQCMATIYRRTHCVVTGAP 396 RS CTHCN+CM TI+ +T CV+ P Sbjct 366 -TRSLCTHCNKCMVTIFEKTRCVLHPLP 392 >gi|288916056|ref|ZP_06410437.1| NADH:flavin oxidoreductase/NADH oxidase [Frankia sp. EUN1f] gi|288352452|gb|EFC86648.1| NADH:flavin oxidoreductase/NADH oxidase [Frankia sp. EUN1f] Length=405 Score = 492 bits (1267), Expect = 4e-137, Method: Compositional matrix adjust. Identities = 256/382 (68%), Positives = 296/382 (78%), Gaps = 1/382 (0%) Query 10 DVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSP 69 +VF PA LGP+TLRNRVIK+ATFE RTPDALVTD+LIE+HR AAGGV MTTVAYCAV+P Sbjct 3 EVFAPAALGPITLRNRVIKSATFEGRTPDALVTDELIEFHREVAAGGVGMTTVAYCAVAP 62 Query 70 GGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFF 129 GGRT +QIWMRP AVPGLRRLT+A+HA GAA SAQ+GHAGPVA+A SN+A ALAP R F Sbjct 63 GGRTDRHQIWMRPQAVPGLRRLTDAVHAHGAAASAQVGHAGPVANAASNRAPALAPSRMF 122 Query 130 NPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRD 189 +P+AMR Q + I V+AAHA AA+LA AGFDAVE+H GHNYL S+FLSP LNRR Sbjct 123 SPLAMRPVQVPDIDGIARVIAAHADAAKLAEQAGFDAVELHFGHNYLVSSFLSPRLNRRG 182 Query 190 DEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDD 249 D +GG L+NRA++AR + AVR AV ++AV AKLNM DG+ GG+TV E+L A WL+ D Sbjct 183 DRYGGPLENRARLAREVARAVREAVGDRLAVIAKLNMEDGVPGGLTVPESLQVAAWLEAD 242 Query 250 GGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYL 309 G LDA+ LTAGSSL+NPM LF G AP K FA A P RWG R+ G F REYPYRD +L Sbjct 243 GALDALVLTAGSSLLNPMLLFHGAAPRKSFAKALPPLARWGFRLVGRSFLREYPYRDGFL 302 Query 310 LREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQ 369 L AR FR EL++PL+LLGGITN M AMAEGF+FVAM RALL EPDL+ RI AE S Sbjct 303 LERARQFRRELSMPLVLLGGITNLDVMREAMAEGFDFVAMGRALLREPDLLLRIQAEES- 361 Query 370 VRSACTHCNQCMATIYRRTHCV 391 RSAC HCN+CM TIY T CV Sbjct 362 TRSACVHCNECMPTIYSGTRCV 383 >gi|111022784|ref|YP_705756.1| NADH-dependent flavin oxidoreductase [Rhodococcus jostii RHA1] gi|110822314|gb|ABG97598.1| probable NADH-dependent flavin oxidoreductase [Rhodococcus jostii RHA1] Length=397 Score = 482 bits (1241), Expect = 4e-134, Method: Compositional matrix adjust. Identities = 240/383 (63%), Positives = 288/383 (76%), Gaps = 1/383 (0%) Query 10 DVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSP 69 D PAKLGP+TLRNRVIKAAT+E TP LVTD+LIE+HR PAAGGV MTTVAYCAV+ Sbjct 13 DPLAPAKLGPITLRNRVIKAATYEGLTPKGLVTDELIEFHRQPAAGGVGMTTVAYCAVAA 72 Query 70 GGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFF 129 GRT QI +PGLR+LT+AIHAEGAA+SAQIGHAGPVA A+ AL P R F Sbjct 73 DGRTSPGQIQWTDETMPGLRKLTDAIHAEGAAVSAQIGHAGPVAAAKYIGFPALGPSRAF 132 Query 130 NPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRD 189 F++ A+ DI ++ AHA+AAR AV+AGFDAVEIH GHNYL S+FLSP +N+R Sbjct 133 RVTTQNFSKPASTADIARIVEAHANAARRAVEAGFDAVEIHFGHNYLISSFLSPKVNKRT 192 Query 190 DEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDD 249 D +GGSL NRA+ A AVR AV +++A+ AKLNM DG+ GG VDEA+ A+WL+ D Sbjct 193 DRYGGSLANRARFALETARAVRDAVGERIAILAKLNMDDGVPGGFWVDEAIQVAQWLEQD 252 Query 250 GGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYL 309 G LDA+ELTAGSSL+NPMYLF+GDAP++EFAA P + GIR+ G F +EYPYRDAYL Sbjct 253 GSLDALELTAGSSLLNPMYLFKGDAPLREFAAVMPQPTKLGIRLVGRHFLKEYPYRDAYL 312 Query 310 LREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQ 369 L +AR RA +T+PL+LLGGIT + TMDLAMAEGF+FVA+ARALL EPDLVNRI E + Sbjct 313 LEDARQIRAAVTMPLVLLGGITGKATMDLAMAEGFQFVAVARALLREPDLVNRITDE-TH 371 Query 370 VRSACTHCNQCMATIYRRTHCVV 392 C HCN+CM IY THCV+ Sbjct 372 NPGLCIHCNKCMTAIYGGTHCVL 394 >gi|289763542|ref|ZP_06522920.1| hypothetical oxidoreductase [Mycobacterium tuberculosis GM 1503] gi|289711048|gb|EFD75064.1| hypothetical oxidoreductase [Mycobacterium tuberculosis GM 1503] Length=333 Score = 476 bits (1224), Expect = 4e-132, Method: Compositional matrix adjust. Identities = 233/233 (100%), Positives = 233/233 (100%), Gaps = 0/233 (0%) Query 164 FDAVEIHLGHNYLASAFLSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAK 223 FDAVEIHLGHNYLASAFLSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAK Sbjct 101 FDAVEIHLGHNYLASAFLSPLLNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAK 160 Query 224 LNMTDGIRGGITVDEALTTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAF 283 LNMTDGIRGGITVDEALTTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAF Sbjct 161 LNMTDGIRGGITVDEALTTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAF 220 Query 284 KPPLRWGIRMTGHRFFREYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEG 343 KPPLRWGIRMTGHRFFREYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEG Sbjct 221 KPPLRWGIRMTGHRFFREYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEG 280 Query 344 FEFVAMARALLAEPDLVNRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 396 FEFVAMARALLAEPDLVNRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP Sbjct 281 FEFVAMARALLAEPDLVNRIAAEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 333 >gi|54026214|ref|YP_120456.1| putative NADH-dependent flavin oxidoreductase [Nocardia farcinica IFM 10152] gi|54017722|dbj|BAD59092.1| putative NADH-dependent flavin oxidoreductase [Nocardia farcinica IFM 10152] Length=403 Score = 475 bits (1223), Expect = 5e-132, Method: Compositional matrix adjust. Identities = 244/383 (64%), Positives = 293/383 (77%), Gaps = 1/383 (0%) Query 10 DVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSP 69 ++F+PA LGP+TLRNRVIKAATFE RTPDA+ ++DLI +HR AAGGV MTTVAYCAV+P Sbjct 3 EIFHPAALGPITLRNRVIKAATFEGRTPDAIASEDLIAFHREVAAGGVGMTTVAYCAVAP 62 Query 70 GGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFF 129 GRT QIW+RP AVP LR+LT+A+HAEGAA AQIGHAGPVADA S + ALAP F Sbjct 63 EGRTERRQIWLRPEAVPSLRKLTDAVHAEGAAACAQIGHAGPVADASSTRLPALAPSPMF 122 Query 130 NPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRD 189 +P+ MR + +I D++AAHA AA LA +AGFDAVEIH GHNYLAS+FLSPLLNRR Sbjct 123 SPLGMRRMKVPAEHEIADLVAAHARAALLAEEAGFDAVEIHFGHNYLASSFLSPLLNRRT 182 Query 190 DEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDD 249 D +GG+L NRA+ AR + AVR AV ++AV AKLNM DG+ GG+T+ E+L A WL+ D Sbjct 183 DGYGGTLANRARFAREIARAVRAAVGGRLAVLAKLNMEDGVPGGLTLPESLQVAAWLEQD 242 Query 250 GGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYL 309 G LDA+ELTAGSSL+NPM LF G P K FA P RWG R+ G +F REYPY+ AYL Sbjct 243 GSLDALELTAGSSLLNPMLLFHGTPPRKSFANVLPVPARWGFRVVGKKFLREYPYQPAYL 302 Query 310 LREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQ 369 L AR FR EL++PL+LLGG+T+ +M LAMAEGF+FVAM RALL EPDL+ RI A+ Sbjct 303 LERARQFRRELSLPLVLLGGVTDLDSMRLAMAEGFDFVAMGRALLREPDLLQRIQADAG- 361 Query 370 VRSACTHCNQCMATIYRRTHCVV 392 RSACTHCN+CM TIY T CV+ Sbjct 362 TRSACTHCNECMPTIYSGTRCVL 384 >gi|54025338|ref|YP_119580.1| putative oxidoreductase [Nocardia farcinica IFM 10152] gi|54016846|dbj|BAD58216.1| putative oxidoreductase [Nocardia farcinica IFM 10152] Length=415 Score = 474 bits (1221), Expect = 8e-132, Method: Compositional matrix adjust. Identities = 230/392 (59%), Positives = 291/392 (75%), Gaps = 1/392 (0%) Query 5 SCEAPDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAY 64 + + PDV PA LGP+ LRNR+IK+ATFE P ALV+D L+E+HR AAGGV MTTVAY Sbjct 3 TAQVPDVLAPADLGPVRLRNRIIKSATFEHMAPGALVSDQLVEFHREVAAGGVGMTTVAY 62 Query 65 CAVSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALA 124 CAV+P GRT +QIWMR AVPGLRRLT+A+HAEGAA SAQIGHAGPVA+A+SN ALA Sbjct 63 CAVAPEGRTEADQIWMREAAVPGLRRLTDAVHAEGAAASAQIGHAGPVANAKSNGLPALA 122 Query 125 PVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPL 184 R +P+ + AT DI + AAH A RLA+++GFDAVEIH GHNY AS+FLSP+ Sbjct 123 ASRRISPMGPQLTHAATVADIARIRAAHGEATRLAIESGFDAVEIHFGHNYFASSFLSPV 182 Query 185 LNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTAR 244 LN+R D +GG L+NRA++ R + VR A ++AV AKLNM DG+ GG +DEA A+ Sbjct 183 LNKRTDAYGGPLRNRARLIREVAAEVREASGGRIAVLAKLNMDDGVPGGFWLDEAAQVAQ 242 Query 245 WLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPY 304 WL+ DG LDAIELT GSSL+NPMYLF+G+AP++EFA P ++ G+++ G F YPY Sbjct 243 WLEADGSLDAIELTIGSSLLNPMYLFKGEAPLREFAEVMSPVMKVGVKVAGKVFLHTYPY 302 Query 305 RDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIA 364 RD ++L AR RA +++PL+LLGGIT++ MD AMAEGFEFVAMARALL EPDL+N+I Sbjct 303 RDLFMLEAARQIRAAVSMPLVLLGGITDKAAMDTAMAEGFEFVAMARALLREPDLINKIQ 362 Query 365 AEGSQVRSACTHCNQCMATIYRRTHCVVTGAP 396 A+ + +S C HCN+CM TI+ T CV+ P Sbjct 363 AD-HEAKSLCIHCNKCMPTIFYDTRCVLRTRP 393 >gi|226365292|ref|YP_002783075.1| oxidoreductase [Rhodococcus opacus B4] gi|226243782|dbj|BAH54130.1| putative oxidoreductase [Rhodococcus opacus B4] Length=397 Score = 473 bits (1217), Expect = 2e-131, Method: Compositional matrix adjust. Identities = 243/383 (64%), Positives = 287/383 (75%), Gaps = 1/383 (0%) Query 10 DVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSP 69 D PA+LGP+TLRNRVIKAATFE TP LVTD+LIE+HR PAAGGV MTTVAYCAV+P Sbjct 13 DPLAPARLGPITLRNRVIKAATFEGLTPKGLVTDELIEFHRQPAAGGVGMTTVAYCAVAP 72 Query 70 GGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFF 129 GRT QI +PGLR+LT+AIHAEGAA+SAQIGHAGPVA A+ AL P R F Sbjct 73 DGRTSPGQIQWTDETMPGLRKLTDAIHAEGAAVSAQIGHAGPVAAAKYIGHPALGPSRAF 132 Query 130 NPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRD 189 F++ AT DI ++ AHAHAAR AVDAGFDAVEIH GHNYL S+FLSP +N+R Sbjct 133 RMTTQNFSKPATAADITRIVEAHAHAARRAVDAGFDAVEIHFGHNYLISSFLSPKVNKRT 192 Query 190 DEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDD 249 DE+GGSL NRA+ A AVR AV ++A+ AKLNM DG+ GG VDEA+ A+WL+ D Sbjct 193 DEYGGSLANRARFALETARAVREAVGGRIAILAKLNMDDGVPGGFWVDEAIQVAQWLEQD 252 Query 250 GGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYL 309 G LDA+ELTAGSSL+NPMYLF+GDAP++EFAA P + GIR+ G F +EYPYRDAYL Sbjct 253 GSLDALELTAGSSLLNPMYLFKGDAPLREFAAVMPQPTKLGIRLVGKHFLKEYPYRDAYL 312 Query 310 LREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQ 369 L +AR RA +T+PL+LLGGIT + TMDLAM EGF+FVA+ARALL EPDLVNRI + Sbjct 313 LDDARQIRAAVTMPLVLLGGITGKATMDLAMEEGFQFVAVARALLREPDLVNRITQDNHN 372 Query 370 VRSACTHCNQCMATIYRRTHCVV 392 C HCN+CM IY THCV+ Sbjct 373 -PGLCIHCNKCMTAIYGGTHCVL 394 >gi|312197382|ref|YP_004017443.1| NADH:flavin oxidoreductase/NADH oxidase [Frankia sp. EuI1c] gi|311228718|gb|ADP81573.1| NADH:flavin oxidoreductase/NADH oxidase [Frankia sp. EuI1c] Length=421 Score = 471 bits (1213), Expect = 6e-131, Method: Compositional matrix adjust. Identities = 248/390 (64%), Positives = 302/390 (78%), Gaps = 3/390 (0%) Query 8 APDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAV 67 APDVF PA LGP+ LRNRVIK+ATFE RTP LVTD+LI+YH PA+GGV +TTVAYCAV Sbjct 30 APDVFAPAMLGPVRLRNRVIKSATFEGRTPKGLVTDELIDYHLAPASGGVGLTTVAYCAV 89 Query 68 SPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVR 127 +P GRT +QI +RP A+PGLRRLTEA+HA GAA+SAQ+GHAGPVA+ SN+A +LAP R Sbjct 90 APEGRTDRHQIHLRPEALPGLRRLTEAVHATGAAVSAQLGHAGPVANGASNRAPSLAPTR 149 Query 128 FFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNR 187 F+P + T DI+ ++AAHA AAR A DAGFDAVE+H GHNYLASAFLSP LNR Sbjct 150 RFSPFG-GVTRATTPADIERIVAAHAQAARYAADAGFDAVELHFGHNYLASAFLSPKLNR 208 Query 188 RDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQ 247 R D +GG+L+ RA+ AR + AVR V Q+AV AKLNM DG+ GG+ +DE+L ARWL+ Sbjct 209 RTDGYGGTLEGRARFAREIAGAVRAEVGGQLAVLAKLNMDDGVPGGLWLDESLRVARWLE 268 Query 248 DDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDA 307 +DG LDA+ LT GSSL+NPMYLFRG+APV+EFA AF R G+R+ G RF + YPY+ Sbjct 269 EDGTLDALVLTCGSSLLNPMYLFRGEAPVREFADAFHGVTRAGLRLVGPRFLKAYPYQPL 328 Query 308 YLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEG 367 Y+L AR FRA LT+PL+LLGG+T++ MD AMAEGF+FVAMARALL EPDLVNR+ A+ Sbjct 329 YMLDYARQFRAALTMPLVLLGGVTDKAGMDTAMAEGFQFVAMARALLREPDLVNRLRADA 388 Query 368 SQVRSACTHCNQCMATIYRRTHCV-VTGAP 396 + RS C HCN+CM TIY + CV VT AP Sbjct 389 T-TRSLCVHCNKCMPTIYSSSRCVLVTPAP 417 >gi|269127691|ref|YP_003301061.1| NADH:flavin oxidoreductase/NADH oxidase [Thermomonospora curvata DSM 43183] gi|268312649|gb|ACY99023.1| NADH:flavin oxidoreductase/NADH oxidase [Thermomonospora curvata DSM 43183] Length=391 Score = 471 bits (1213), Expect = 7e-131, Method: Compositional matrix adjust. Identities = 234/385 (61%), Positives = 290/385 (76%), Gaps = 1/385 (0%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PDV PAKLGP+TLRNR+IK+AT+E + D VTD LI++H AAGGV MTTVAYCAV+ Sbjct 6 PDVLAPAKLGPVTLRNRIIKSATYEGLSRDNKVTDALIDFHVRHAAGGVGMTTVAYCAVA 65 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 P GRT QI A+PGLRRLTEA+HAEGAA+SAQIGHAGPVA+ ++N A AL P R Sbjct 66 PDGRTDRKQILWTEDALPGLRRLTEAVHAEGAAVSAQIGHAGPVANPKANGAPALGPSRH 125 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 F+ F + ATR D++ ++ AH HAAR+A+ AGFDAVEIHLGHNYLAS+FLSP +N R Sbjct 126 FHATTTSFTKAATRADLERIIKAHGHAARMAIRAGFDAVEIHLGHNYLASSFLSPRVNHR 185 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQD 248 DDE+GGSL+NRA++AR + VR AV ++A+ AK NM DG+ GG +DEA+ ARWL+ Sbjct 186 DDEYGGSLENRARLARAIAREVREAVGDRIAILAKFNMDDGVPGGFWLDEAIQVARWLEA 245 Query 249 DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAY 308 DG LDA+ LTAGSSL+NPMYLFRGD P++EFAA P++ G+++ G RF + YPY DAY Sbjct 246 DGSLDALVLTAGSSLLNPMYLFRGDVPLREFAAIMPQPVKLGVQLVGKRFLKYYPYEDAY 305 Query 309 LLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGS 368 LL AR RA + +PL+LLGGIT + MD+AM EGFEFVAMARALL EPDL+N+IA + Sbjct 306 LLPLARQIRAAVKLPLVLLGGITGKPVMDVAMREGFEFVAMARALLREPDLINKIAKD-P 364 Query 369 QVRSACTHCNQCMATIYRRTHCVVT 393 Q S C HCN+C IY T CV+ Sbjct 365 QASSLCIHCNKCFTKIYGGTSCVLV 389 >gi|111025778|ref|YP_708198.1| flavin reductase [Rhodococcus jostii RHA1] gi|110824757|gb|ABH00040.1| probable flavin reductase [Rhodococcus jostii RHA1] Length=414 Score = 465 bits (1197), Expect = 5e-129, Method: Compositional matrix adjust. Identities = 220/387 (57%), Positives = 289/387 (75%), Gaps = 1/387 (0%) Query 10 DVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSP 69 DV PA LGP+ LRNR +KAAT+E D LVTD LI++H A GGVAMTTVAYCAV+P Sbjct 8 DVLAPASLGPVKLRNRTVKAATYENMARDGLVTDQLIDFHVEHARGGVAMTTVAYCAVAP 67 Query 70 GGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFF 129 GRT +QI RP AVPGL+RLT+++H EGAAISAQIGH+GPV + +S + +AP R F Sbjct 68 DGRTDHHQILWRPEAVPGLQRLTDSVHEEGAAISAQIGHSGPVNNRKSTKTRPIAPSRHF 127 Query 130 NPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRD 189 N +R A+++DI+ V+ AH AAR+A+D GFDAVE+HLGHNYLAS+FLSP +NRR Sbjct 128 NKQFLRVVGAASKDDIERVIDAHGAAARMAIDTGFDAVEVHLGHNYLASSFLSPNINRRK 187 Query 190 DEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDD 249 DE+GGSL NRA++ ++ AVR A + ++A+ KLNM DG+ GG +DEA+ A+W++ Sbjct 188 DEYGGSLANRARLGLRILDAVREAAQDRLAIVVKLNMDDGVPGGFWLDEAMQVAQWIEQS 247 Query 250 GGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYL 309 G DA+E+TAGSSL+NPMYLF+GD+P+ +FAAA P+R G+++ G REYPY D YL Sbjct 248 GNADALEMTAGSSLLNPMYLFKGDSPINDFAAALPEPVRTGVKLVGKHVLREYPYADGYL 307 Query 310 LREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQ 369 +++A R+ +++P+ILLGG+TNR TMD AM+ GF+FVAM RALL EPDL+NRIAA+ S Sbjct 308 MQDALQIRSAVSMPMILLGGVTNRQTMDEAMSAGFDFVAMGRALLREPDLINRIAAD-SA 366 Query 370 VRSACTHCNQCMATIYRRTHCVVTGAP 396 RS C H N+CM T + T CV+ AP Sbjct 367 TRSLCNHNNKCMVTTFTNTRCVLRPAP 393 >gi|326331657|ref|ZP_08197945.1| oxidoreductase [Nocardioidaceae bacterium Broad-1] gi|325950456|gb|EGD42508.1| oxidoreductase [Nocardioidaceae bacterium Broad-1] Length=407 Score = 450 bits (1157), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 232/383 (61%), Positives = 276/383 (73%), Gaps = 3/383 (0%) Query 10 DVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSP 69 D PA LGP+TLRNRVIKAATFE +P ALV+D LI+YH A GGV MTTVAY AV+P Sbjct 7 DPLAPATLGPVTLRNRVIKAATFEGASPGALVSDRLIDYHLAVAEGGVGMTTVAYLAVAP 66 Query 70 GGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFF 129 GRT + I+ RP A+PGL RLTE IH GA +SAQIGHAGPV +A+SN A +LAP R F Sbjct 67 EGRTHADCIYWRPEALPGLTRLTEEIHKTGAKVSAQIGHAGPVGNAKSNGAPSLAPARSF 126 Query 130 NPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRD 189 N + M F + AT D+ V+ H AAR+AV+ GFDA+E+HLGHNYL S+FLSP LN R Sbjct 127 NALGMAFNRAATAADLARVVEQHGAAARMAVETGFDAIEVHLGHNYLPSSFLSPRLNPRT 186 Query 190 DEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDD 249 DEFGGSL NRA R ++ AVR AV QVAV AK+NM DG RGG + E++ AR L+ D Sbjct 187 DEFGGSLVNRASFPRRILAAVREAVGGQVAVLAKMNMRDGYRGGFDLPESVEFARLLEAD 246 Query 250 GGLDAIELTAGSSLVNPMYLFRGDAPVKEFAA--AFKPPLRWGIRMTGHRFFREYPYRDA 307 G LDA+ELT GSS +NPMYLFRGDAP +E AA P +R G+RM G FF+EYPY+ Sbjct 247 GHLDALELTGGSSFMNPMYLFRGDAPYREMAANMPLHPVIRLGMRMVGKGFFKEYPYKPL 306 Query 308 YLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEG 367 Y L AR FR LT+PL+LLGG+T+ M AM EGFE+VAMARALL EPDLVNR+ A+ Sbjct 307 YFLDTAREFRRALTMPLVLLGGVTDLAGMRTAMDEGFEYVAMARALLREPDLVNRLRADP 366 Query 368 SQVRSACTHCNQCMATIYRRTHC 390 + S C HCN CM+TIY THC Sbjct 367 T-TESRCIHCNLCMSTIYPGTHC 388 >gi|262200745|ref|YP_003271953.1| NADH:flavin oxidoreductase/NADH oxidase [Gordonia bronchialis DSM 43247] gi|262084092|gb|ACY20060.1| NADH:flavin oxidoreductase/NADH oxidase [Gordonia bronchialis DSM 43247] Length=412 Score = 444 bits (1142), Expect = 1e-122, Method: Compositional matrix adjust. Identities = 234/392 (60%), Positives = 282/392 (72%), Gaps = 12/392 (3%) Query 12 FNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSPGG 71 F+PA LGPLTLRNR+IK ATFE TPDALVTDDLIE+HR AAGGVAM+TVAYCA++P G Sbjct 15 FSPATLGPLTLRNRLIKCATFEGMTPDALVTDDLIEFHREVAAGGVAMSTVAYCAIAPEG 74 Query 72 RTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFFNP 131 RT +QIW+RP A+PGLRRLT+AIHAEGA +AQ+GHAGPVA++ SN+A AL P R P Sbjct 75 RTDRHQIWLRPEAMPGLRRLTDAIHAEGAIAAAQLGHAGPVANSVSNRAKALGPSRIPAP 134 Query 132 IAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRDDE 191 + M K + +DI + A AAR+AVD+GFD +EIH GHNYL S FLSPLLN R D Sbjct 135 MGMSVTHKVSLDDIAGLHATFRRAARIAVDSGFDGLEIHCGHNYLISCFLSPLLNHRRDG 194 Query 192 FGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIR-----------GGITVDEAL 240 +GGSL NRA++AR +V +VR V + AV KLNM DG+ G +DEA Sbjct 195 YGGSLVNRARLAREVVESVREEVGDEAAVWVKLNMYDGVGRPGPGRGGRRWSGFNIDEAC 254 Query 241 TTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFR 300 + A+ L+ DG LDAIE TAGSSL+NPMYLF GDAP FA AF+ +RWG++ G F + Sbjct 255 SVAQLLESDGHLDAIEPTAGSSLLNPMYLFHGDAPRAAFADAFRGTMRWGLKAAGPFFLK 314 Query 301 EYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLV 360 Y Y D YLL AR RA + +PLILLGG+T+R +MD A+AEGF+FVAM RALL EPDL Sbjct 315 HYDYHDGYLLPLARQLRAAVDLPLILLGGVTDRASMDTALAEGFDFVAMGRALLREPDLP 374 Query 361 NRIAAEGSQVRSACTHCNQCMATIYRRTHCVV 392 RIAA+ + SACTHCN CM TIY T C V Sbjct 375 LRIAADATTT-SACTHCNLCMPTIYSHTRCPV 405 >gi|302528347|ref|ZP_07280689.1| NADH-dependent flavin oxidoreductase [Streptomyces sp. AA4] gi|302437242|gb|EFL09058.1| NADH-dependent flavin oxidoreductase [Streptomyces sp. AA4] Length=411 Score = 436 bits (1122), Expect = 2e-120, Method: Compositional matrix adjust. Identities = 223/377 (60%), Positives = 283/377 (76%), Gaps = 1/377 (0%) Query 16 KLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSPGGRTGG 75 +LGP+ LRNRV+KAAT+E + VT DL+++H A GGV MTTVAYCAV+ GRT Sbjct 17 RLGPVRLRNRVVKAATYEGLSHHGRVTRDLVDFHVGYAKGGVGMTTVAYCAVAKEGRTDR 76 Query 76 NQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFFNPIAMR 135 +QI+ A+PGLR LT+A+HAEGAAISAQIGHAGPVA + N ALAP R+F + Sbjct 77 HQIYWTDEALPGLRVLTDAVHAEGAAISAQIGHAGPVAAPKGNGLPALAPSRYFPQATLS 136 Query 136 FAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRDDEFGGS 195 FA++ I+ V AHA AAR A++ GFDA+E+HLGHNYL S+FLSP LNRR DE+GGS Sbjct 137 FAREIDHAGIERVKRAHAEAARRAIECGFDAIEVHLGHNYLISSFLSPKLNRRTDEYGGS 196 Query 196 LQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQDDGGLDAI 255 L+NRA++AR + AVR AV ++AV K+NM DG+ GG +DEA+ +WL+ DG DA+ Sbjct 197 LENRARLARDTMRAVRDAVGDRIAVIVKMNMDDGVPGGFWLDEAIPVTQWLEADGTCDAL 256 Query 256 ELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAYLLREARL 315 E+TAGSSL+NPMYLF+GDAPV+EFAA PLR G+R G RF REYPYRDA+LL +AR Sbjct 257 EMTAGSSLLNPMYLFKGDAPVREFAAVLPQPLRLGVRAVGKRFIREYPYRDAFLLEDARQ 316 Query 316 FRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGSQVRSACT 375 RA + +P++LLGGIT+R +M+LAM EGF++VAM RALL EPDLVNRIAA+ S+ S C Sbjct 317 IRAAVKLPMVLLGGITDRASMELAMREGFQYVAMGRALLREPDLVNRIAAD-SRTPSLCI 375 Query 376 HCNQCMATIYRRTHCVV 392 HCN+CM T + T CV+ Sbjct 376 HCNKCMPTNFTGTRCVL 392 >gi|330466753|ref|YP_004404496.1| NADH:flavin oxidoreductase/NADH oxidase [Verrucosispora maris AB-18-032] gi|328809724|gb|AEB43896.1| NADH:flavin oxidoreductase/NADH oxidase [Verrucosispora maris AB-18-032] Length=409 Score = 434 bits (1117), Expect = 1e-119, Method: Compositional matrix adjust. Identities = 227/382 (60%), Positives = 279/382 (74%), Gaps = 1/382 (0%) Query 9 PDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVS 68 PD PA LGP+ LRNRVIK+ATFE TPDALVTD LIEYH GGV MTTVAY AV+ Sbjct 8 PDPLAPATLGPVRLRNRVIKSATFEGATPDALVTDRLIEYHTAVGRGGVGMTTVAYLAVA 67 Query 69 PGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRF 128 P GRT Q++ RP A+PGLRRLTEA+HA GA +SAQIGHAGPVA++RSN +LA Sbjct 68 PEGRTERGQVYWRPEALPGLRRLTEAVHATGAKVSAQIGHAGPVANSRSNGLPSLAASAR 127 Query 129 FNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRR 188 FNP++M F + AT +DI ++AAH AA A + GFDAVE+HLGH YLA +FLSP LNRR Sbjct 128 FNPLSMGFDRAATHDDIHRIVAAHGSAAAAAREVGFDAVEVHLGHTYLAGSFLSPKLNRR 187 Query 189 DDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQD 248 DEFGG+L NRA+ AR ++ AV+ A VAV AKLNM+DG+ GG +D+++ AR LQ Sbjct 188 RDEFGGALANRAEFARRILAAVKEAAGDDVAVIAKLNMSDGVPGGFDLDDSIPFARMLQA 247 Query 249 DGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDAY 308 DG LDA+ELT GSSL+NPM+LFRGD P+ AA P LR G++M G FR+YPY+ Y Sbjct 248 DGHLDALELTGGSSLLNPMFLFRGDIPLAAMAAPQPPLLRLGMKMFGRFLFRDYPYQPLY 307 Query 309 LLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAEGS 368 A FR EL++PLILLGG+T+ M AM++GFE+VAMARALL EPDL+N+I + + Sbjct 308 FRDLALQFRRELSMPLILLGGVTDLDGMRTAMSDGFEYVAMARALLREPDLINKIRRDAT 367 Query 369 QVRSACTHCNQCMATIYRRTHC 390 RS CTHCN C A+I+ THC Sbjct 368 -TRSRCTHCNLCAASIFTGTHC 388 >gi|343925725|ref|ZP_08765240.1| putative oxidoreductase [Gordonia alkanivorans NBRC 16433] gi|343764076|dbj|GAA12166.1| putative oxidoreductase [Gordonia alkanivorans NBRC 16433] Length=426 Score = 432 bits (1112), Expect = 4e-119, Method: Compositional matrix adjust. Identities = 229/406 (57%), Positives = 283/406 (70%), Gaps = 21/406 (5%) Query 7 EAPDV--FNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAY 64 ++PD F+PA+LGPLTLRNR+IK ATFE TPDALVTD+L+E+HR AAGGVAM+TVAY Sbjct 2 DSPDAGPFSPAQLGPLTLRNRLIKCATFEGMTPDALVTDELVEFHREVAAGGVAMSTVAY 61 Query 65 CAVSPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALA 124 CAVSP GRT +QIWMRP A+PGLR+LT+AIH+EGA +AQ+GHAG VA++ SN+A A Sbjct 62 CAVSPEGRTDRHQIWMRPEAMPGLRKLTDAIHSEGALAAAQLGHAGAVANSVSNRAKAWG 121 Query 125 PVRFFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPL 184 P R P+ M KA+ DI ++ AAR+AVD+GFD +EIH GHNYL S+FLSPL Sbjct 122 PGRIPAPMGMSLTHKASVSDIAELRVKFRQAARIAVDSGFDGLEIHCGHNYLISSFLSPL 181 Query 185 LNRRDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGI-------------- 230 LN R D +GGSL NRA++AR +V +VR V + A+ KLN DG+ Sbjct 182 LNHRRDGYGGSLVNRARMAREVVESVREEVGDEAAIWVKLNTYDGVGKPDIERSPEARTK 241 Query 231 ----RGGITVDEALTTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPP 286 G VDEA A+ L+ DG LDAIE TAGSSL+NPMYLF G+AP KEFAAAF P Sbjct 242 GRAKLSGFNVDEACQVAQLLESDGHLDAIEPTAGSSLLNPMYLFHGEAPRKEFAAAFSGP 301 Query 287 LRWGIRMTGHRFFREYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEF 346 +++G++ F + Y Y D YLL AR R + +P+ILLGGIT+R +MD AMAEGFEF Sbjct 302 MKYGLKAFAPIFLKHYQYHDGYLLPLARELRKAVDLPMILLGGITDRASMDTAMAEGFEF 361 Query 347 VAMARALLAEPDLVNRIAAEGSQVRSACTHCNQCMATIYRRTHCVV 392 +AM RA+L EPDL RIAA+ S S C HCN CM TIY T C + Sbjct 362 MAMGRAVLREPDLPLRIAADPSTT-SKCVHCNLCMPTIYSHTRCPI 406 >gi|311744286|ref|ZP_07718090.1| oxidoreductase [Aeromicrobium marinum DSM 15272] gi|311312459|gb|EFQ82372.1| oxidoreductase [Aeromicrobium marinum DSM 15272] Length=389 Score = 429 bits (1104), Expect = 3e-118, Method: Compositional matrix adjust. Identities = 219/386 (57%), Positives = 274/386 (71%), Gaps = 2/386 (0%) Query 8 APDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAV 67 A DVF PA LGP+ LRNR +KAATFE RTP LVTDDLI+YH P+ GGV +TTVAY AV Sbjct 2 ATDVFEPAVLGPVRLRNRTVKAATFEGRTPGGLVTDDLIDYHLAPSRGGVGLTTVAYLAV 61 Query 68 SPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVR 127 +P GRT + I + + PGL RLT+A+H+ GA I+ Q+GHAGPVAD RSN ALA R Sbjct 62 APEGRTYRDVIVVDERSAPGLARLTDAVHSTGARIAGQLGHAGPVADGRSNGVHALAASR 121 Query 128 FFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNR 187 +P++++ + + DI + A + +ARL V+ GFD +EIH+ H YL S+FL+P NR Sbjct 122 MPSPLSLQMIRSPSAADIARITADYVRSARLMVETGFDVLEIHMAHGYLLSSFLAPKQNR 181 Query 188 RDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQ 247 R D +GGSL+NRA+ AR + AVR V VAVTAK+ MT+G G ++ E++ AR L+ Sbjct 182 RTDRWGGSLENRARFARDVARAVREEVGDAVAVTAKIGMTEGSPAGFSMPESVEFARMLE 241 Query 248 DDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRM-TGHRFFREYPYRD 306 DG LDA+EL+AGSSL+NPMYLFRGD P+KEFAA P+R G+R G RFF+EYP+ + Sbjct 242 ADGHLDALELSAGSSLLNPMYLFRGDVPLKEFAAHMPLPVRLGLRTPVGKRFFKEYPFEE 301 Query 307 AYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAE 366 +L +A FRA + +PLI LGGI +R TMD AMAEGFEFVAM RALL EPDLVNR+ A Sbjct 302 GFLRDKALTFRAAVDMPLIALGGINDRATMDRAMAEGFEFVAMGRALLREPDLVNRMQA- 360 Query 367 GSQVRSACTHCNQCMATIYRRTHCVV 392 G R AC HCNQCM TIY T C V Sbjct 361 GETTRGACIHCNQCMPTIYTGTRCTV 386 >gi|326383165|ref|ZP_08204854.1| NADH:flavin oxidoreductase/NADH oxidase [Gordonia neofelifaecis NRRL B-59395] gi|326198301|gb|EGD55486.1| NADH:flavin oxidoreductase/NADH oxidase [Gordonia neofelifaecis NRRL B-59395] Length=415 Score = 428 bits (1100), Expect = 9e-118, Method: Compositional matrix adjust. Identities = 222/394 (57%), Positives = 272/394 (70%), Gaps = 12/394 (3%) Query 10 DVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAVSP 69 D F PAKLGPLTLRNR+IK ATFE TPDALVTDDLI++HR AAGG AM+TVAYCA++P Sbjct 10 DPFAPAKLGPLTLRNRIIKCATFEGMTPDALVTDDLIDFHREVAAGGAAMSTVAYCAIAP 69 Query 70 GGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVRFF 129 GRT +QIWMRP AVPGL LT AIHAEGA +AQ+GHAGPVA++ SN AL P R Sbjct 70 EGRTDRHQIWMRPEAVPGLTELTSAIHAEGALAAAQLGHAGPVANSVSNGLPALGPGRIP 129 Query 130 NPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNRRD 189 P+ M K EDI ++ A AARLAVD+GF+ +EIHLGHNYL S+F+SP+LN R Sbjct 130 APMGMSLTDKVQLEDIPVLVRKFATAARLAVDSGFNGLEIHLGHNYLLSSFMSPMLNHRR 189 Query 190 DEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIR-----------GGITVDE 238 D +GG+ NRA+ AR ++ AVR V + AV AKLNM DG+ G +D+ Sbjct 190 DAYGGNAVNRARFAREVLEAVRNEVGDEAAVWAKLNMFDGVGKPGRGRGGKAWSGTNLDD 249 Query 239 ALTTARWLQDDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRF 298 A+ A + DG +DAIE TAGSSL+NPMYLF G+ P++ FA A ++ G++M G F Sbjct 250 AIKYAELFEGDGHIDAIEPTAGSSLLNPMYLFHGEPPLESFADAMVGAMKTGMKMGGKMF 309 Query 299 FREYPYRDAYLLREARLFRAELTIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPD 358 + YPY DAYLL AR R +++PLILLGGIT+R +M LAM EGF+FVAM RALL EPD Sbjct 310 LKHYPYTDAYLLPLARELRKSVSLPLILLGGITDRASMQLAMDEGFDFVAMGRALLREPD 369 Query 359 LVNRIAAEGSQVRSACTHCNQCMATIYRRTHCVV 392 L I + S S C HCN CM TIY +T C + Sbjct 370 LPLLIQNDPS-TESKCVHCNLCMPTIYSKTRCPI 402 >gi|118468266|ref|YP_887208.1| NADH:flavin oxidoreductase/NADH oxidase [Mycobacterium smegmatis str. MC2 155] gi|118169553|gb|ABK70449.1| NADH:flavin oxidoreductase/nadh oxidase [Mycobacterium smegmatis str. MC2 155] Length=412 Score = 417 bits (1071), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 212/386 (55%), Positives = 263/386 (69%), Gaps = 2/386 (0%) Query 8 APDVFNPAKLGPLTLRNRVIKAATFEARTPDALVTDDLIEYHRLPAAGGVAMTTVAYCAV 67 +PD F P +LGP+ LRNRVIKAAT E R+PD +VTDDLI++HR A GGV MTTVAYC V Sbjct 5 SPDPFAPVQLGPVRLRNRVIKAATSEGRSPDGVVTDDLIDFHRGFAEGGVGMTTVAYCCV 64 Query 68 SPGGRTGGNQIWMRPHAVPGLRRLTEAIHAEGAAISAQIGHAGPVADARSNQATALAPVR 127 SP + QI M A+PGLR+LT+A+H GAAISAQ+GHAG VA + TA+AP R Sbjct 65 SPQAASAPGQIVMNAKALPGLRKLTDAVHGAGAAISAQLGHAGVVAQKKLTGVTAVAPSR 124 Query 128 FFNPIAMRFAQKATREDIDDVLAAHAHAARLAVDAGFDAVEIHLGHNYLASAFLSPLLNR 187 F NP + + + TR +I V+ AA++AVDAGFDAVE+H GH YL S+FLSPL+NR Sbjct 125 FVNPTSFAYCRAITRSEIAMVIDQFGDAAQVAVDAGFDAVELHFGHLYLPSSFLSPLINR 184 Query 188 RDDEFGGSLQNRAKVARGLVMAVRRAVRQQVAVTAKLNMTDGIRGGITVDEALTTARWLQ 247 R DE+GG + NR++ R + VR V +VAV AKLNM DG+ G I +DEAL TA L Sbjct 185 RKDEYGGDIDNRSRFVREIAGRVREVVGDRVAVIAKLNMDDGLPGSIWIDEALRTASLLD 244 Query 248 DDGGLDAIELTAGSSLVNPMYLFRGDAPVKEFAAAFKPPLRWGIRMTGHRFFREYPYRDA 307 D LDAIELT GSS+ PMYLFRGD PV+EFA P +R +R+ G + YPY D Sbjct 245 ADQTLDAIELTQGSSVFKPMYLFRGDVPVREFAQVMPPAMRPAVRVVGKKAMGSYPYEDL 304 Query 308 YLLREARLFRAEL-TIPLILLGGITNRTTMDLAMAEGFEFVAMARALLAEPDLVNRIAAE 366 Y+L AR F + LILLGGITNR ++ + EGFE +AM RALL EPDLVNR+ + Sbjct 305 YMLPAARQFVPVVRNTKLILLGGITNRDHLETGLREGFELMAMGRALLREPDLVNRMMTD 364 Query 367 GSQVRSACTHCNQCMATIYRRTHCVV 392 RS C H N+CM T++ RTHCV+ Sbjct 365 AG-TRSRCNHNNKCMVTVFGRTHCVL 389 Lambda K H 0.323 0.136 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 776545622928 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40