BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3362c
Length=193
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610498|ref|NP_217879.1| ATP/GTP-binding protein [Mycobacter... 388 2e-106
gi|183981190|ref|YP_001849481.1| GTP/ATP-binding protein [Mycoba... 348 2e-94
gi|240169066|ref|ZP_04747725.1| putative ATP/GTP-binding protein... 340 6e-92
gi|254822558|ref|ZP_05227559.1| ATP/GTP-binding protein [Mycobac... 337 5e-91
gi|342861575|ref|ZP_08718222.1| ATP/GTP-binding protein [Mycobac... 336 1e-90
gi|296168827|ref|ZP_06850503.1| ATP/GTP-binding protein [Mycobac... 332 1e-89
gi|41409567|ref|NP_962403.1| hypothetical protein MAP3469c [Myco... 332 2e-89
gi|118618272|ref|YP_906604.1| GTP/ATP-binding protein [Mycobacte... 331 3e-89
gi|333991837|ref|YP_004524451.1| GTP/ATP-binding protein [Mycoba... 323 7e-87
gi|118473306|ref|YP_886017.1| ATP/GTP-binding protein [Mycobacte... 311 2e-83
gi|108798163|ref|YP_638360.1| hypothetical protein Mmcs_1192 [My... 306 7e-82
gi|145225462|ref|YP_001136140.1| hypothetical protein Mflv_4886 ... 299 2e-79
gi|315445815|ref|YP_004078694.1| GTPase [Mycobacterium sp. Spyr1... 296 7e-79
gi|120402547|ref|YP_952376.1| hypothetical protein Mvan_1539 [My... 293 1e-77
gi|229488758|ref|ZP_04382624.1| ATP/GTP-binding protein [Rhodoco... 271 4e-71
gi|226362907|ref|YP_002780687.1| hypothetical protein ROP_34950 ... 270 8e-71
gi|226308034|ref|YP_002767994.1| hypothetical protein RER_45470 ... 268 2e-70
gi|84494309|ref|ZP_00993428.1| putative ATP/GTP-binding protein ... 263 1e-68
gi|226364834|ref|YP_002782616.1| hypothetical protein ROP_54240 ... 259 1e-67
gi|54022637|ref|YP_116879.1| putative ATP/GTP-binding protein [N... 258 5e-67
gi|54026942|ref|YP_121184.1| putative ATP/GTP-binding protein [N... 255 3e-66
gi|290957446|ref|YP_003488628.1| hypothetical protein SCAB_29671... 249 2e-64
gi|296268961|ref|YP_003651593.1| hypothetical protein Tbis_0977 ... 245 2e-63
gi|257056447|ref|YP_003134279.1| putative GTPase [Saccharomonosp... 243 8e-63
gi|288919723|ref|ZP_06414050.1| protein of unknown function ATP ... 241 5e-62
gi|256379421|ref|YP_003103081.1| hypothetical protein Amir_5416 ... 240 6e-62
gi|325001158|ref|ZP_08122270.1| hypothetical protein PseP1_20452... 240 6e-62
gi|134097171|ref|YP_001102832.1| ATP/GTP-binding protein [Saccha... 240 7e-62
gi|134102773|ref|YP_001108434.1| ATP/GTP-binding protein [Saccha... 240 8e-62
gi|300784400|ref|YP_003764691.1| ATP/GTP-binding protein [Amycol... 239 1e-61
gi|158317735|ref|YP_001510243.1| hypothetical protein Franean1_5... 239 1e-61
gi|86739354|ref|YP_479754.1| hypothetical protein Francci3_0641 ... 239 2e-61
gi|312199967|ref|YP_004020028.1| hypothetical protein FraEuI1c_6... 239 2e-61
gi|336179725|ref|YP_004585100.1| ATP binding protein [Frankia sy... 238 2e-61
gi|337768351|emb|CCB77064.1| putative ATP/GTP-binding protein [S... 238 3e-61
gi|256374614|ref|YP_003098274.1| hypothetical protein Amir_0461 ... 238 3e-61
gi|297157275|gb|ADI06987.1| putative ATP/GTP-binding protein [St... 238 3e-61
gi|296268957|ref|YP_003651589.1| hypothetical protein Tbis_0973 ... 238 4e-61
gi|72161347|ref|YP_289004.1| ATP/GTP-binding protein [Thermobifi... 238 5e-61
gi|271963360|ref|YP_003337556.1| hypothetical protein Sros_1824 ... 237 7e-61
gi|302525625|ref|ZP_07277967.1| ATP/GTP-binding protein [Strepto... 236 9e-61
gi|331699468|ref|YP_004335707.1| hypothetical protein Psed_5727 ... 236 1e-60
gi|326332161|ref|ZP_08198442.1| ATP/GTP-binding protein [Nocardi... 236 2e-60
gi|329939745|ref|ZP_08289046.1| ATP/GTP-binding protein [Strepto... 236 2e-60
gi|134097300|ref|YP_001102961.1| ATP/GTP-binding protein [Saccha... 235 2e-60
gi|345009293|ref|YP_004811647.1| ATP-binding protein [Streptomyc... 235 2e-60
gi|182436007|ref|YP_001823726.1| putative ATP/GTP-binding protei... 235 3e-60
gi|297559792|ref|YP_003678766.1| hypothetical protein Ndas_0816 ... 235 3e-60
gi|291447717|ref|ZP_06587107.1| ATP/GTP-binding protein [Strepto... 234 3e-60
gi|302537136|ref|ZP_07289478.1| ATP/GTP-binding protein [Strepto... 234 4e-60
>gi|15610498|ref|NP_217879.1| ATP/GTP-binding protein [Mycobacterium tuberculosis H37Rv]
gi|15842958|ref|NP_337995.1| hypothetical protein MT3470 [Mycobacterium tuberculosis CDC1551]
gi|31794545|ref|NP_857038.1| ATP/GTP-binding protein [Mycobacterium bovis AF2122/97]
82 more sequence titles
Length=193
Score = 388 bits (997), Expect = 2e-106, Method: Compositional matrix adjust.
Identities = 192/193 (99%), Positives = 193/193 (100%), Gaps = 0/193 (0%)
Query 1 VALKHSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPD 60
+ALKHSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPD
Sbjct 1 MALKHSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPD 60
Query 61 KRSTTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFA 120
KRSTTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFA
Sbjct 61 KRSTTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFA 120
Query 121 AVDFFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAV 180
AVDFFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAV
Sbjct 121 AVDFFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAV 180
Query 181 SEYALATLSPAGG 193
SEYALATLSPAGG
Sbjct 181 SEYALATLSPAGG 193
>gi|183981190|ref|YP_001849481.1| GTP/ATP-binding protein [Mycobacterium marinum M]
gi|183174516|gb|ACC39626.1| conserved hypothetical GTP/ATP-binding protein [Mycobacterium
marinum M]
Length=200
Score = 348 bits (893), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/197 (88%), Positives = 182/197 (93%), Gaps = 4/197 (2%)
Query 1 VALKHSEAS----GTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLE 56
+ALKHSEA GTASTKIV+AGGFGSGKTTFVGAVSEIMPLRTEAMVTDAS GVDMLE
Sbjct 1 MALKHSEAHSASRGTASTKIVVAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASVGVDMLE 60
Query 57 ATPDKRSTTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQ 116
ATPDKR+TTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQ
Sbjct 61 ATPDKRTTTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQ 120
Query 117 DSFAAVDFFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDA 176
DSFAAVDFFEHRNLPFLIAINEFD A +YP++ VR AL L A +PVI VDARNRRSATDA
Sbjct 121 DSFAAVDFFEHRNLPFLIAINEFDGAQKYPIAEVRKALMLRAEVPVITVDARNRRSATDA 180
Query 177 LIAVSEYALATLSPAGG 193
LIA+SEYALA+L+ AGG
Sbjct 181 LIALSEYALASLTAAGG 197
>gi|240169066|ref|ZP_04747725.1| putative ATP/GTP-binding protein [Mycobacterium kansasii ATCC
12478]
Length=196
Score = 340 bits (872), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 166/194 (86%), Positives = 179/194 (93%), Gaps = 5/194 (2%)
Query 1 VALKHSEA-----SGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDML 55
+A KHSEA + ASTKIVIAGGFG+GKTTFVGAVSEIMPLRTEAMVTDAS GVDML
Sbjct 1 MASKHSEAHLRDTAAHASTKIVIAGGFGAGKTTFVGAVSEIMPLRTEAMVTDASVGVDML 60
Query 56 EATPDKRSTTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRL 115
E TP K++TTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRL
Sbjct 61 EVTPQKQTTTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRL 120
Query 116 QDSFAAVDFFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATD 175
+DSFAAVDFFEHRNLPFL+A+NEFD APRYP + VR ALTLPAHIPVIN+DAR+RRSATD
Sbjct 121 EDSFAAVDFFEHRNLPFLVAVNEFDGAPRYPAAEVRQALTLPAHIPVINIDARSRRSATD 180
Query 176 ALIAVSEYALATLS 189
ALIAVSEYALA+L+
Sbjct 181 ALIAVSEYALASLT 194
>gi|254822558|ref|ZP_05227559.1| ATP/GTP-binding protein [Mycobacterium intracellulare ATCC 13950]
Length=188
Score = 337 bits (864), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 162/186 (88%), Positives = 174/186 (94%), Gaps = 0/186 (0%)
Query 5 HSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRST 64
++ ASTKIVIAGGFG+GKTTFVGAVSEIMPLRTEAM+TDAS GVD LEATPDKR+T
Sbjct 2 QQDSGAHASTKIVIAGGFGAGKTTFVGAVSEIMPLRTEAMLTDASTGVDALEATPDKRTT 61
Query 65 TVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDF 124
TVAMDFGRITL EDLVLYLFGTPGQRRFWFMWDDLVRGAIGA+VLVDCRRLQDSFAAVDF
Sbjct 62 TVAMDFGRITLAEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAVVLVDCRRLQDSFAAVDF 121
Query 125 FEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYA 184
FEHRNLPFL+A+NEFD APRYPV+ VR+ALTLP HIPVI VDAR+RRSATDALIAVSEYA
Sbjct 122 FEHRNLPFLVAVNEFDGAPRYPVAEVREALTLPPHIPVITVDARDRRSATDALIAVSEYA 181
Query 185 LATLSP 190
LATL+P
Sbjct 182 LATLTP 187
>gi|342861575|ref|ZP_08718222.1| ATP/GTP-binding protein [Mycobacterium colombiense CECT 3035]
gi|342131064|gb|EGT84353.1| ATP/GTP-binding protein [Mycobacterium colombiense CECT 3035]
Length=195
Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/185 (88%), Positives = 176/185 (96%), Gaps = 0/185 (0%)
Query 5 HSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRST 64
++++ ASTKIVIAGGFG+GKTTFVGAVSEIMPLRTEAM+TDAS GVD LEATPDKR+T
Sbjct 9 QADSAAHASTKIVIAGGFGAGKTTFVGAVSEIMPLRTEAMLTDASTGVDALEATPDKRTT 68
Query 65 TVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDF 124
TVAMDFGRITL EDLVLYLFGTPGQRRFWFMWDDLVRGAIGA+VLVDCRRLQDSFAAVDF
Sbjct 69 TVAMDFGRITLAEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAVVLVDCRRLQDSFAAVDF 128
Query 125 FEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYA 184
FEHRNLPFLIA+NEFD APRYPV+ VR+ALTLP HIPVI++DAR+RRSATDALIAVSEYA
Sbjct 129 FEHRNLPFLIAVNEFDGAPRYPVAEVREALTLPPHIPVISIDARDRRSATDALIAVSEYA 188
Query 185 LATLS 189
LA+LS
Sbjct 189 LASLS 193
>gi|296168827|ref|ZP_06850503.1| ATP/GTP-binding protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896502|gb|EFG76150.1| ATP/GTP-binding protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=187
Score = 332 bits (852), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/181 (90%), Positives = 171/181 (95%), Gaps = 0/181 (0%)
Query 9 SGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAM 68
S ASTKIVIAGGFG+GKTTFVGAVSEIMPLRTEAM+TDASA VD LEATPDKR+TTVAM
Sbjct 5 SAHASTKIVIAGGFGAGKTTFVGAVSEIMPLRTEAMLTDASAAVDALEATPDKRTTTVAM 64
Query 69 DFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHR 128
DFGRITL EDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRL+DSFAAVDFFEHR
Sbjct 65 DFGRITLDEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLEDSFAAVDFFEHR 124
Query 129 NLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATL 188
NLPFL+A+NEFD APRYPV+ VR ALTLP HIPVI VDAR+RRSATDALIAVSEYALATL
Sbjct 125 NLPFLVAVNEFDGAPRYPVAEVRQALTLPPHIPVITVDARDRRSATDALIAVSEYALATL 184
Query 189 S 189
+
Sbjct 185 T 185
>gi|41409567|ref|NP_962403.1| hypothetical protein MAP3469c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118462621|ref|YP_883464.1| ATP/GTP-binding protein [Mycobacterium avium 104]
gi|254776756|ref|ZP_05218272.1| ATP/GTP-binding protein [Mycobacterium avium subsp. avium ATCC
25291]
gi|41398398|gb|AAS06019.1| hypothetical protein MAP_3469c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118163908|gb|ABK64805.1| ATP/GTP-binding protein [Mycobacterium avium 104]
gi|336459777|gb|EGO38692.1| putative GTPase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=195
Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 160/178 (90%), Positives = 170/178 (96%), Gaps = 0/178 (0%)
Query 12 ASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFG 71
ASTKIVIAGGFG+GKTTFVGAVSEIMPLRTEAM+TDAS GVD LEATPDKR+TTVAMDFG
Sbjct 16 ASTKIVIAGGFGAGKTTFVGAVSEIMPLRTEAMLTDASTGVDALEATPDKRTTTVAMDFG 75
Query 72 RITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLP 131
RITL +DLVLYLFGTPGQRRFWFMWDDLVRGAIGA+VLVDCRRLQDSFAAVDFFEHRNLP
Sbjct 76 RITLADDLVLYLFGTPGQRRFWFMWDDLVRGAIGAVVLVDCRRLQDSFAAVDFFEHRNLP 135
Query 132 FLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATLS 189
FL+A+NEFD APRYPV VR+ALTLP HIPVI VDAR+RRSATDALIAVSEYALA+LS
Sbjct 136 FLVAVNEFDGAPRYPVEEVREALTLPPHIPVITVDARDRRSATDALIAVSEYALASLS 193
>gi|118618272|ref|YP_906604.1| GTP/ATP-binding protein [Mycobacterium ulcerans Agy99]
gi|118570382|gb|ABL05133.1| conserved hypothetical GTP/ATP-binding protein [Mycobacterium
ulcerans Agy99]
Length=201
Score = 331 bits (849), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/198 (84%), Positives = 176/198 (89%), Gaps = 5/198 (2%)
Query 1 VALKHSEASGTASTK-----IVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDML 55
+ALKHSEA A V+AGGFGSGKTTFVGAVSEIMPLRTEAMVTDAS GVDML
Sbjct 1 MALKHSEAHSAARAAPHRRRFVVAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASVGVDML 60
Query 56 EATPDKRSTTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRL 115
EATPDKR+TTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRL
Sbjct 61 EATPDKRTTTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRL 120
Query 116 QDSFAAVDFFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATD 175
QDSFAAVDFFEHRNLPFLIAINEFD A +YPV+ VR AL L A +PVI VDAR+RRSATD
Sbjct 121 QDSFAAVDFFEHRNLPFLIAINEFDGAQKYPVAEVRKALMLRAEVPVITVDARDRRSATD 180
Query 176 ALIAVSEYALATLSPAGG 193
ALIA+SEYALA+L+ AGG
Sbjct 181 ALIALSEYALASLTAAGG 198
>gi|333991837|ref|YP_004524451.1| GTP/ATP-binding protein [Mycobacterium sp. JDM601]
gi|333487805|gb|AEF37197.1| GTP/ATP-binding protein [Mycobacterium sp. JDM601]
Length=197
Score = 323 bits (828), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 156/183 (86%), Positives = 169/183 (93%), Gaps = 0/183 (0%)
Query 11 TASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDF 70
+ASTKIVIAGGFG GKTTFVG VSEIMPLRTEA+VTDASA VD L+ATP+KR+TTVAMDF
Sbjct 15 SASTKIVIAGGFGVGKTTFVGTVSEIMPLRTEALVTDASAAVDTLDATPEKRTTTVAMDF 74
Query 71 GRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNL 130
GRITL +DLVLYLFGTPGQRRFWFMWDDLVRGAIGAI+L DCRRLQDSFAAVDFFEHRNL
Sbjct 75 GRITLADDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIILADCRRLQDSFAAVDFFEHRNL 134
Query 131 PFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATLSP 190
PFLIAINEFD APRYPV+AVR AL LP HIPVI VDAR++RSA DALIA+SEYAL+ L+P
Sbjct 135 PFLIAINEFDGAPRYPVAAVRKALALPDHIPVITVDARDQRSARDALIAISEYALSALAP 194
Query 191 AGG 193
A G
Sbjct 195 AQG 197
>gi|118473306|ref|YP_886017.1| ATP/GTP-binding protein [Mycobacterium smegmatis str. MC2 155]
gi|118174593|gb|ABK75489.1| ATP/GTP-binding protein [Mycobacterium smegmatis str. MC2 155]
Length=193
Score = 311 bits (798), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/193 (78%), Positives = 168/193 (88%), Gaps = 0/193 (0%)
Query 1 VALKHSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPD 60
+A +HSE ASTKIVI+GGFG+GKTTFVGAVSEIMPLRTEA+VT+ S G+D LE TPD
Sbjct 1 MAYEHSEKRSAASTKIVISGGFGAGKTTFVGAVSEIMPLRTEALVTNVSEGIDPLEGTPD 60
Query 61 KRSTTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFA 120
KR+TTVAMDFGRITL EDLVLYLFGTPGQRRFWFMWDDLVRGAIGAI+LVD RRLQDSFA
Sbjct 61 KRTTTVAMDFGRITLAEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIILVDVRRLQDSFA 120
Query 121 AVDFFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAV 180
AVDFFE R LPF++A+NEFD AP++P AVR AL LP HIPVI VDAR+R SA ALIAV
Sbjct 121 AVDFFEARKLPFIVAVNEFDGAPKHPTHAVRKALALPEHIPVITVDARDRNSAKAALIAV 180
Query 181 SEYALATLSPAGG 193
+EY+L+TL+P G
Sbjct 181 TEYSLSTLTPLPG 193
>gi|108798163|ref|YP_638360.1| hypothetical protein Mmcs_1192 [Mycobacterium sp. MCS]
gi|119867259|ref|YP_937211.1| hypothetical protein Mkms_1209 [Mycobacterium sp. KMS]
gi|126433822|ref|YP_001069513.1| hypothetical protein Mjls_1219 [Mycobacterium sp. JLS]
gi|108768582|gb|ABG07304.1| protein of unknown function, ATP binding protein [Mycobacterium
sp. MCS]
gi|119693348|gb|ABL90421.1| protein of unknown function, ATP binding protein [Mycobacterium
sp. KMS]
gi|126233622|gb|ABN97022.1| protein of unknown function, ATP binding protein [Mycobacterium
sp. JLS]
Length=193
Score = 306 bits (785), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 148/193 (77%), Positives = 170/193 (89%), Gaps = 0/193 (0%)
Query 1 VALKHSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPD 60
+A +HS+ +++TKIV++GGFG+GKTTFVGAVSEIMPLRTEA+VT+ASAGVD LE TPD
Sbjct 1 MAYEHSDTRRSSATKIVVSGGFGAGKTTFVGAVSEIMPLRTEALVTNASAGVDGLEGTPD 60
Query 61 KRSTTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFA 120
KR+TTVAMDFGRITL +DLVLYLFGTPGQRRFWFMWDDL+RGAIGAI+LVD RRLQDSFA
Sbjct 61 KRTTTVAMDFGRITLADDLVLYLFGTPGQRRFWFMWDDLIRGAIGAIILVDVRRLQDSFA 120
Query 121 AVDFFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAV 180
AVDFFE RNLPFL+AINEFD APR+ AVR AL LPAHIPVI VDAR+R SA ALIA+
Sbjct 121 AVDFFEARNLPFLVAINEFDGAPRHSTDAVRKALALPAHIPVITVDARSRESAKAALIAI 180
Query 181 SEYALATLSPAGG 193
+EY+L +LS G
Sbjct 181 TEYSLNSLSALPG 193
>gi|145225462|ref|YP_001136140.1| hypothetical protein Mflv_4886 [Mycobacterium gilvum PYR-GCK]
gi|145217948|gb|ABP47352.1| protein of unknown function, ATP binding protein [Mycobacterium
gilvum PYR-GCK]
Length=192
Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/188 (77%), Positives = 168/188 (90%), Gaps = 0/188 (0%)
Query 5 HSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRST 64
HS++ G ASTKIVI+GGFG+GKTTFVGAVSEI+PLRTEA+VT AS G+D L ATPDK +T
Sbjct 5 HSDSRGRASTKIVISGGFGAGKTTFVGAVSEIVPLRTEALVTTASTGLDGLAATPDKTTT 64
Query 65 TVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDF 124
TVAMDFGRI+L +DLVLYLFGTPGQRRFWFMWDDL+RGAIGAI+LVD RRL+DSFAAVDF
Sbjct 65 TVAMDFGRISLDDDLVLYLFGTPGQRRFWFMWDDLIRGAIGAIILVDVRRLEDSFAAVDF 124
Query 125 FEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYA 184
FE R LPFLIA+N+FD APR+P+ AVR+AL L H+PVI+VDAR+R SA ALIAV+EYA
Sbjct 125 FEARKLPFLIAVNDFDGAPRHPLPAVREALALAEHVPVISVDARSRESAKSALIAVAEYA 184
Query 185 LATLSPAG 192
L+ L+PAG
Sbjct 185 LSRLAPAG 192
>gi|315445815|ref|YP_004078694.1| GTPase [Mycobacterium sp. Spyr1]
gi|315264118|gb|ADU00860.1| predicted GTPase [Mycobacterium sp. Spyr1]
Length=192
Score = 296 bits (759), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 143/188 (77%), Positives = 168/188 (90%), Gaps = 0/188 (0%)
Query 5 HSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRST 64
HS++ G ASTKIVI+GGFG+GKTTFVGAVSEI+PLRTEA+VT AS G+D L ATPDK +T
Sbjct 5 HSDSRGRASTKIVISGGFGAGKTTFVGAVSEIVPLRTEALVTTASTGLDGLAATPDKTTT 64
Query 65 TVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDF 124
TVAMDFGRI+L +DLVLYLFGTPG+RRFWFMWDDL+RGAIGAI+LVD RRL+DSFAAVDF
Sbjct 65 TVAMDFGRISLDDDLVLYLFGTPGRRRFWFMWDDLIRGAIGAIILVDVRRLEDSFAAVDF 124
Query 125 FEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYA 184
FE R LPFLIA+N+FD APR+P+ AVR+AL L H+PVI+VDAR+R SA ALIAV+EYA
Sbjct 125 FEARKLPFLIAVNDFDGAPRHPLPAVREALALAEHVPVISVDARSRESAKSALIAVAEYA 184
Query 185 LATLSPAG 192
L+ L+PAG
Sbjct 185 LSRLAPAG 192
>gi|120402547|ref|YP_952376.1| hypothetical protein Mvan_1539 [Mycobacterium vanbaalenii PYR-1]
gi|119955365|gb|ABM12370.1| protein of unknown function, ATP binding protein [Mycobacterium
vanbaalenii PYR-1]
Length=188
Score = 293 bits (749), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/181 (79%), Positives = 160/181 (89%), Gaps = 0/181 (0%)
Query 12 ASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFG 71
ASTKIV++GGFG GKTTFVGAVSEI+PLRTEA+VT+AS GVD LEATPDK +TTVAMDFG
Sbjct 8 ASTKIVVSGGFGVGKTTFVGAVSEIVPLRTEALVTNASQGVDGLEATPDKSTTTVAMDFG 67
Query 72 RITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLP 131
RI+L EDLVLYLFGTPGQRRFWFMWDDLVRGAIGAI+LVD RRL DSFAAVDFFE R LP
Sbjct 68 RISLAEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIILVDVRRLADSFAAVDFFEARGLP 127
Query 132 FLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATLSPA 191
FL+A+NEFD APR+P+ AVR AL L H+P+I VDAR+R SA ALIAV+EYAL+ L+P
Sbjct 128 FLVAVNEFDGAPRHPLPAVRTALALSDHVPLITVDARSRESAKAALIAVTEYALSRLAPT 187
Query 192 G 192
G
Sbjct 188 G 188
>gi|229488758|ref|ZP_04382624.1| ATP/GTP-binding protein [Rhodococcus erythropolis SK121]
gi|229324262|gb|EEN90017.1| ATP/GTP-binding protein [Rhodococcus erythropolis SK121]
Length=195
Score = 271 bits (693), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/186 (71%), Positives = 154/186 (83%), Gaps = 1/186 (0%)
Query 5 HSEASG-TASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRS 63
HS++S STKIVIAGGFG GKTT VG VSEI+PLRTEAMVTDAS G+D L +TPDK +
Sbjct 5 HSDSSSRVKSTKIVIAGGFGVGKTTLVGTVSEIVPLRTEAMVTDASDGIDNLGSTPDKST 64
Query 64 TTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVD 123
TTVAMDFGRITL +DLVLYLFGTPGQRRFWFMWDDL+ GAIGA++LVD RRL+DSFAAVD
Sbjct 65 TTVAMDFGRITLADDLVLYLFGTPGQRRFWFMWDDLITGAIGAVILVDTRRLEDSFAAVD 124
Query 124 FFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEY 183
FFE R LPF++A+N FD AP + S +R AL LP +P+I +DARNR SA ALIAV+EY
Sbjct 125 FFEARGLPFIVAVNRFDGAPIHSASDLRQALALPNRVPMIEIDARNRESAKRALIAVTEY 184
Query 184 ALATLS 189
+L L+
Sbjct 185 SLERLA 190
>gi|226362907|ref|YP_002780687.1| hypothetical protein ROP_34950 [Rhodococcus opacus B4]
gi|226241394|dbj|BAH51742.1| hypothetical protein [Rhodococcus opacus B4]
Length=183
Score = 270 bits (690), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 130/180 (73%), Positives = 150/180 (84%), Gaps = 0/180 (0%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
STKIVIAGGFG GKTT VGAVSEI+PLRTEA+VT+AS GVD L ATP K +TTVAMDFGR
Sbjct 3 STKIVIAGGFGVGKTTLVGAVSEIVPLRTEALVTNASDGVDNLAATPQKGTTTVAMDFGR 62
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
I+L +DLVLYLFGTPGQ RFWFMWDDL+RGAIGAIVL+D RRL +SFAAVDFFE R LPF
Sbjct 63 ISLADDLVLYLFGTPGQHRFWFMWDDLIRGAIGAIVLIDTRRLDESFAAVDFFEARQLPF 122
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATLSPAG 192
L+AINEFD APRYP+ +R AL + +P+I +DAR+R SA AL+A++EYAL L A
Sbjct 123 LVAINEFDDAPRYPIEDIRAALAISEDVPIIPIDARDRESAKRALVAITEYALTKLHTAA 182
>gi|226308034|ref|YP_002767994.1| hypothetical protein RER_45470 [Rhodococcus erythropolis PR4]
gi|226187151|dbj|BAH35255.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=184
Score = 268 bits (686), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/177 (73%), Positives = 149/177 (85%), Gaps = 0/177 (0%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
STKIVIAGGFG GKTT VG VSEI+PLRTEAMVTDAS G+D L +TPDK +TTVAMDFGR
Sbjct 3 STKIVIAGGFGVGKTTLVGTVSEIVPLRTEAMVTDASDGIDNLGSTPDKSTTTVAMDFGR 62
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
ITL +DLVLYLFGTPGQRRFWFMWDDL+ GAIGA++LVD RRL+DSFAAVDFFE R LPF
Sbjct 63 ITLADDLVLYLFGTPGQRRFWFMWDDLITGAIGAVILVDTRRLEDSFAAVDFFEARGLPF 122
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATLS 189
++A+N FD AP + S +R AL LP +P+I +DARNR SA ALIAV+EY+L L+
Sbjct 123 IVAVNRFDGAPIHSASDLRQALALPNRVPMIEIDARNRESAKRALIAVTEYSLERLA 179
>gi|84494309|ref|ZP_00993428.1| putative ATP/GTP-binding protein [Janibacter sp. HTCC2649]
gi|84383802|gb|EAP99682.1| putative ATP/GTP-binding protein [Janibacter sp. HTCC2649]
Length=201
Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/180 (71%), Positives = 151/180 (84%), Gaps = 0/180 (0%)
Query 6 SEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTT 65
S ++G ASTKIV+AGGFG GKTT VGAVSEI+PLRTEA+VT S GVD L TP K +TT
Sbjct 7 SASTGAASTKIVVAGGFGVGKTTLVGAVSEIVPLRTEALVTKESTGVDDLANTPLKSTTT 66
Query 66 VAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFF 125
VAMDFGRITLG+DLVLYLFGTPGQRRFWFMWDDLVRGAIGA++LVD +RL ++FAAVD+F
Sbjct 67 VAMDFGRITLGDDLVLYLFGTPGQRRFWFMWDDLVRGAIGAVILVDTQRLDEAFAAVDYF 126
Query 126 EHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
E + LPF++A+NEFD A R+ V VR+AL LP IPV+ +DAR+R SA AL+ V+EYAL
Sbjct 127 EAKGLPFIVAVNEFDGAQRFHVEDVREALALPPSIPVLAIDARDRESAKAALVRVTEYAL 186
>gi|226364834|ref|YP_002782616.1| hypothetical protein ROP_54240 [Rhodococcus opacus B4]
gi|226243323|dbj|BAH53671.1| hypothetical protein [Rhodococcus opacus B4]
Length=206
Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/177 (72%), Positives = 146/177 (83%), Gaps = 0/177 (0%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
S KIVIAGGFG GKTT VGAVSEI+PLRTEAMVTDAS VD + ATP K +TTVAMDFGR
Sbjct 23 SAKIVIAGGFGVGKTTLVGAVSEIVPLRTEAMVTDASTDVDSVMATPRKVTTTVAMDFGR 82
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
+TL +DLVLYLFGTPGQ RFWFMWDDLVRGAIGAIVL+D RRL DSFAAVD+FE R LPF
Sbjct 83 LTLADDLVLYLFGTPGQHRFWFMWDDLVRGAIGAIVLIDTRRLDDSFAAVDYFESRRLPF 142
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATLS 189
L+A+N+FD APRYP+ +R AL + A +P+I VDARNR S +L+ ++ YAL L+
Sbjct 143 LVAVNDFDDAPRYPLDDIRAALAVAADVPIICVDARNRASVKASLLEITTYALQELN 199
>gi|54022637|ref|YP_116879.1| putative ATP/GTP-binding protein [Nocardia farcinica IFM 10152]
gi|54014145|dbj|BAD55515.1| putative ATP/GTP-binding protein [Nocardia farcinica IFM 10152]
Length=176
Score = 258 bits (658), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 118/169 (70%), Positives = 145/169 (86%), Gaps = 0/169 (0%)
Query 17 VIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGRITLG 76
++AGGFG GKTT VGAVSEI+PLRTEA+VT+ASAG+D L P K +TTVAMDFGRI+L
Sbjct 1 MVAGGFGVGKTTLVGAVSEIVPLRTEALVTNASAGIDNLTGIPMKSTTTVAMDFGRISLA 60
Query 77 EDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPFLIAI 136
+DLVLYLFGTPGQ RFWFMWDDL+RGAIGA+VLVD RRL+DSFAAVD+FE RNLPFL+A+
Sbjct 61 DDLVLYLFGTPGQYRFWFMWDDLIRGAIGAVVLVDTRRLEDSFAAVDYFEARNLPFLVAL 120
Query 137 NEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
NEFD APRYP+ +R AL + A +P++++DAR R A AL++++EYAL
Sbjct 121 NEFDDAPRYPIEDIRQALAVSADVPILSIDARRREPAKQALVSLTEYAL 169
>gi|54026942|ref|YP_121184.1| putative ATP/GTP-binding protein [Nocardia farcinica IFM 10152]
gi|54018450|dbj|BAD59820.1| putative ATP/GTP-binding protein [Nocardia farcinica IFM 10152]
Length=194
Score = 255 bits (651), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/179 (69%), Positives = 149/179 (84%), Gaps = 0/179 (0%)
Query 11 TASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDF 70
TASTKIV+AGGFG+GKTTFVGAVSEI+PLRTEAMVT S G+D L ATP K +TTVAMDF
Sbjct 5 TASTKIVVAGGFGAGKTTFVGAVSEIVPLRTEAMVTGFSDGIDDLAATPGKETTTVAMDF 64
Query 71 GRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNL 130
GRI L +L LYLFGTPGQRRFWFMWDDL+RGAIGA+VLVD RR++DSFAAVDFFE R L
Sbjct 65 GRIMLPGNLTLYLFGTPGQRRFWFMWDDLIRGAIGAVVLVDTRRIEDSFAAVDFFEARGL 124
Query 131 PFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATLS 189
PFLIA+N F +PR+PV+ +R+AL++ +P++++DARN +L AV+EYA+ L+
Sbjct 125 PFLIAVNRFPDSPRFPVAELREALSVRPIVPIVDIDARNATEVRQSLAAVTEYAIQRLA 183
>gi|290957446|ref|YP_003488628.1| hypothetical protein SCAB_29671 [Streptomyces scabiei 87.22]
gi|260646972|emb|CBG70071.1| RarD (conservon) homolog [Streptomyces scabiei 87.22]
Length=282
Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/178 (68%), Positives = 147/178 (83%), Gaps = 1/178 (0%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
+TKIV+AGGFG GKTTFVGAVSEI PLRTEA++T+ASAG D L ATPDK +TTVAMD+GR
Sbjct 105 ATKIVVAGGFGVGKTTFVGAVSEITPLRTEALMTEASAGTDDLSATPDKLTTTVAMDYGR 164
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
ITL +DLVLYLFGTPGQ RFWFMWDD+VRGAIGA+VL D RRL D F A+D+FE LP+
Sbjct 165 ITLDDDLVLYLFGTPGQERFWFMWDDMVRGAIGAVVLADTRRLDDCFPALDYFESSGLPY 224
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATLSP 190
++A+N FD + RY VRDALT+PAH+PV+ +DAR R SA + L+A+ +A+ +LSP
Sbjct 225 VVAVNVFDGSVRYEPEDVRDALTVPAHVPVMIMDARKRASAMETLLALCGHAI-SLSP 281
>gi|296268961|ref|YP_003651593.1| hypothetical protein Tbis_0977 [Thermobispora bispora DSM 43833]
gi|296091748|gb|ADG87700.1| protein of unknown function ATP binding protein [Thermobispora
bispora DSM 43833]
Length=208
Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/178 (67%), Positives = 140/178 (79%), Gaps = 0/178 (0%)
Query 8 ASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVA 67
+ G STKIV+AGGFG GKTTFVGAVSEI+PL TEA++TDASAG+D TP+K +TTVA
Sbjct 19 SRGLTSTKIVVAGGFGVGKTTFVGAVSEIVPLTTEAVMTDASAGIDDTRLTPNKTTTTVA 78
Query 68 MDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEH 127
MDFGR++L DL+LYLFGTPGQ RFWFMWDDLVRGAIGA+VLVD RRL DSF AVD+FE
Sbjct 79 MDFGRVSLDRDLILYLFGTPGQHRFWFMWDDLVRGAIGAVVLVDTRRLADSFPAVDYFEE 138
Query 128 RNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
LPF+I IN FD + VR+ALTLP HIP++ DARNR + + LI + E+AL
Sbjct 139 AQLPFIIGINGFDGQFPHSEEEVREALTLPPHIPIVRTDARNREAVKNTLITLVEHAL 196
>gi|257056447|ref|YP_003134279.1| putative GTPase [Saccharomonospora viridis DSM 43017]
gi|256586319|gb|ACU97452.1| predicted GTPase [Saccharomonospora viridis DSM 43017]
Length=204
Score = 243 bits (621), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 113/173 (66%), Positives = 141/173 (82%), Gaps = 0/173 (0%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
S KIV+AGGFG+GKTTFVG+VSEI+PL TEAM+T AS G+D LEATP+K +TTVAMDFGR
Sbjct 19 SAKIVVAGGFGAGKTTFVGSVSEIVPLTTEAMMTSASTGIDDLEATPNKATTTVAMDFGR 78
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
++L EDL+LYLFGTPGQ+RFWFMWDDLVRGAIGA+VL D RRL DSFA VDFFE R LP+
Sbjct 79 VSLDEDLILYLFGTPGQQRFWFMWDDLVRGAIGAVVLADTRRLADSFAPVDFFEDRGLPY 138
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
++ +N FD + ++ VR+AL++ A IP++ DAR+R S LI + EYA+
Sbjct 139 IVGVNTFDGVLHHDLNDVREALSIDASIPIVRCDARDRESTKQTLITLVEYAM 191
>gi|288919723|ref|ZP_06414050.1| protein of unknown function ATP binding [Frankia sp. EUN1f]
gi|288348912|gb|EFC83162.1| protein of unknown function ATP binding [Frankia sp. EUN1f]
Length=211
Score = 241 bits (614), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 115/181 (64%), Positives = 140/181 (78%), Gaps = 0/181 (0%)
Query 6 SEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTT 65
+ A T S KIV+AGGFG+GKTTFVG+VSEI+PLRTEA++T+A A VD L DK +TT
Sbjct 25 NSAVATTSVKIVVAGGFGAGKTTFVGSVSEIVPLRTEAVMTEAGAHVDDLTHLVDKTTTT 84
Query 66 VAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFF 125
VAMDFGR++L EDL+LYLFGTPGQ RFWFMWDD+VRGAIGAIVL D RRL D FAAVD+F
Sbjct 85 VAMDFGRVSLDEDLILYLFGTPGQYRFWFMWDDIVRGAIGAIVLADTRRLADCFAAVDYF 144
Query 126 EHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
E R LPF+I +N FD R+ + VR+AL + +P+I DARNR S ALIAV E+ +
Sbjct 145 EQRQLPFVIGVNCFDGVLRHSIEDVREALQISQAVPIITCDARNRDSTKSALIAVVEHTM 204
Query 186 A 186
+
Sbjct 205 S 205
>gi|256379421|ref|YP_003103081.1| hypothetical protein Amir_5416 [Actinosynnema mirum DSM 43827]
gi|255923724|gb|ACU39235.1| protein of unknown function ATP binding [Actinosynnema mirum
DSM 43827]
Length=195
Score = 240 bits (613), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/178 (65%), Positives = 144/178 (81%), Gaps = 0/178 (0%)
Query 8 ASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVA 67
A T STKIV+AGGFG GKTTFVG+VSEI+PL TEA++T+AS GVD L +TP+K +TTVA
Sbjct 11 APTTTSTKIVVAGGFGVGKTTFVGSVSEIVPLTTEAVMTEASVGVDDLSSTPNKVTTTVA 70
Query 68 MDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEH 127
MDFGR++L DL+LYLFGTPGQ RFWFMWDDLV+GAIGA+VLVD RRL D+FA++DFFE
Sbjct 71 MDFGRVSLDSDLILYLFGTPGQHRFWFMWDDLVKGAIGAVVLVDTRRLSDAFASIDFFED 130
Query 128 RNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
R+LP+++ +N FD + V VR+ALT+ A +P+I DARNR+S LI + E+AL
Sbjct 131 RDLPYVVGVNCFDGLLHHRVEDVREALTVDASVPIIPCDARNRQSTKQTLITLVEHAL 188
>gi|325001158|ref|ZP_08122270.1| hypothetical protein PseP1_20452 [Pseudonocardia sp. P1]
Length=183
Score = 240 bits (613), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 113/180 (63%), Positives = 146/180 (82%), Gaps = 0/180 (0%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
S KIV+AGGFG GKTTFVG+VSEIMPL TEA++T+AS+ D L ATP+KRSTTVAMDFGR
Sbjct 2 SAKIVVAGGFGVGKTTFVGSVSEIMPLTTEAVMTEASSSHDDLSATPNKRSTTVAMDFGR 61
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
++L DLVLYLFGTPGQ+RFWFMWDDLVRGAIGA+VLVD RRL DSFAA+DFFE RNLP+
Sbjct 62 VSLDSDLVLYLFGTPGQQRFWFMWDDLVRGAIGAVVLVDTRRLADSFAAIDFFEDRNLPY 121
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATLSPAG 192
++ +N FD ++ + VR+A+++ +P++ DAR+R+S + LIA+ ++A+ AG
Sbjct 122 VVGVNAFDGHLQHGLEDVREAMSIDPAVPMVVCDARHRQSTKETLIALVQHAMHQRMAAG 181
>gi|134097171|ref|YP_001102832.1| ATP/GTP-binding protein [Saccharopolyspora erythraea NRRL 2338]
gi|291005372|ref|ZP_06563345.1| ATP/GTP-binding protein [Saccharopolyspora erythraea NRRL 2338]
gi|133909794|emb|CAL99906.1| ATP/GTP-binding protein [Saccharopolyspora erythraea NRRL 2338]
Length=202
Score = 240 bits (613), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 113/181 (63%), Positives = 144/181 (80%), Gaps = 0/181 (0%)
Query 5 HSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRST 64
++ STKIV+AGGFG GKTTFVG+VSEI+PL TEA++T+AS GVD L ATP K +T
Sbjct 13 NNHGGNKTSTKIVVAGGFGVGKTTFVGSVSEIVPLTTEAVMTEASVGVDDLTATPGKVTT 72
Query 65 TVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDF 124
TVAMDFGR++L DL+LYLFGTPGQ RFWFMWDDLVRGAIGA+VLVD RRL D+FA++DF
Sbjct 73 TVAMDFGRVSLDSDLILYLFGTPGQHRFWFMWDDLVRGAIGAVVLVDTRRLADAFASIDF 132
Query 125 FEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYA 184
F+ R LP+++A+N FD + + VR+ALT+ +P+I+VDARNR S ALI + E+A
Sbjct 133 FDDRGLPYVVAVNTFDGVLHHRMEDVREALTIADSVPMISVDARNRESTKQALIKLVEHA 192
Query 185 L 185
+
Sbjct 193 M 193
>gi|134102773|ref|YP_001108434.1| ATP/GTP-binding protein [Saccharopolyspora erythraea NRRL 2338]
gi|133915396|emb|CAM05509.1| ATP/GTP-binding protein [Saccharopolyspora erythraea NRRL 2338]
Length=200
Score = 240 bits (612), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 110/175 (63%), Positives = 142/175 (82%), Gaps = 0/175 (0%)
Query 11 TASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDF 70
T S KIV+AGGFG GKTTFVG+VSEI+PL TEA++T+AS G+D L ATP+K++TTVAMDF
Sbjct 18 TTSAKIVVAGGFGVGKTTFVGSVSEIVPLTTEAVMTEASRGIDDLRATPNKQTTTVAMDF 77
Query 71 GRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNL 130
GR++L DL+LYLFGTPGQ RFWFMWDDLVRGAIGA+VLVD RRL D F+A+DFFE R L
Sbjct 78 GRLSLDSDLILYLFGTPGQHRFWFMWDDLVRGAIGAVVLVDTRRLADCFSAIDFFEDRGL 137
Query 131 PFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
P+++ +N F++ + + VR+A+ + AH+P++ DARNR S ALI + EYA+
Sbjct 138 PYVVGLNCFNAQMYHRIDDVREAIAVGAHVPIVTCDARNRESTKQALIVLVEYAM 192
>gi|300784400|ref|YP_003764691.1| ATP/GTP-binding protein [Amycolatopsis mediterranei U32]
gi|299793914|gb|ADJ44289.1| ATP/GTP-binding protein [Amycolatopsis mediterranei U32]
gi|340525821|gb|AEK41026.1| ATP/GTP-binding protein [Amycolatopsis mediterranei S699]
Length=187
Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/173 (64%), Positives = 140/173 (81%), Gaps = 0/173 (0%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
S KIV+AGGFG+GKTTFVG+VSEI+PL TEAM+TDAS GVD L+ TP+K +TTVAMDFGR
Sbjct 3 SAKIVVAGGFGAGKTTFVGSVSEIVPLTTEAMMTDASVGVDNLDHTPNKSTTTVAMDFGR 62
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
++L DL+LYLFGTPGQ+RFWFMWDDLVRGAIGA+VL D RRL DSFA +DFFE R LP+
Sbjct 63 VSLDADLILYLFGTPGQQRFWFMWDDLVRGAIGAVVLADTRRLADSFAPIDFFEDRGLPY 122
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
++ +N FD + ++ VR+AL++ +IP++ DAR+R S LI + EYA+
Sbjct 123 IVGVNTFDGVLEHDINDVREALSIDPNIPIVRCDARDRESTKQTLITLVEYAM 175
>gi|158317735|ref|YP_001510243.1| hypothetical protein Franean1_5993 [Frankia sp. EAN1pec]
gi|158113140|gb|ABW15337.1| protein of unknown function ATP binding [Frankia sp. EAN1pec]
Length=198
Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/181 (63%), Positives = 140/181 (78%), Gaps = 0/181 (0%)
Query 6 SEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTT 65
+ A T S KIV+AGGFG+GKTTFVG+VSEI+PLRTEA++T+A A VD L DK +TT
Sbjct 12 NSAVATTSVKIVVAGGFGAGKTTFVGSVSEIVPLRTEAVMTEAGAHVDDLTHLVDKTTTT 71
Query 66 VAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFF 125
VAMDFGR++L EDL+LYLFGTPGQ RFWFMWDD+VRGAIGAIVL D RRL D FAAVD+F
Sbjct 72 VAMDFGRVSLDEDLILYLFGTPGQYRFWFMWDDIVRGAIGAIVLADTRRLADCFAAVDYF 131
Query 126 EHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
E R LPF++ +N FD R+ + VR+AL + +P+I DARNR S ALIAV E+ +
Sbjct 132 EQRQLPFVVGVNCFDGILRHSIEDVREALQINQAVPIITCDARNRDSTKSALIAVVEHTM 191
Query 186 A 186
+
Sbjct 192 S 192
>gi|86739354|ref|YP_479754.1| hypothetical protein Francci3_0641 [Frankia sp. CcI3]
gi|86566216|gb|ABD10025.1| protein of unknown function, ATP binding [Frankia sp. CcI3]
Length=198
Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/181 (64%), Positives = 140/181 (78%), Gaps = 0/181 (0%)
Query 6 SEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTT 65
+ A T S KIV+AGGFG+GKTTFVG+VSEI+PLRTEA++T+A A +D L DK +TT
Sbjct 12 NSAVATTSVKIVVAGGFGAGKTTFVGSVSEIVPLRTEAVMTEAGAHIDDLTHLMDKTTTT 71
Query 66 VAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFF 125
VAMDFGR++L EDL+LYLFGTPGQ RFWFMWDD+VRGAIGAIVL D RRL D FAAVD+F
Sbjct 72 VAMDFGRVSLDEDLILYLFGTPGQYRFWFMWDDIVRGAIGAIVLADTRRLADCFAAVDYF 131
Query 126 EHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
E R LPF+I +N FD R+ + VR+AL + +PVI DARNR S ALIAV E+ +
Sbjct 132 EQRQLPFVIGVNCFDGILRHSIEDVREALQVSPAVPVITCDARNRDSTKSALIAVVEHTM 191
Query 186 A 186
+
Sbjct 192 S 192
>gi|312199967|ref|YP_004020028.1| hypothetical protein FraEuI1c_6174 [Frankia sp. EuI1c]
gi|311231303|gb|ADP84158.1| protein of unknown function ATP binding protein [Frankia sp.
EuI1c]
Length=198
Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/176 (65%), Positives = 138/176 (79%), Gaps = 0/176 (0%)
Query 11 TASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDF 70
T S KIV+AGGFG+GKTTFVG+VSEI+PLRTEA++T+A A VD L DK +TTVAMDF
Sbjct 17 TTSVKIVVAGGFGAGKTTFVGSVSEIVPLRTEAVMTEAGAHVDDLTHLVDKTTTTVAMDF 76
Query 71 GRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNL 130
GR++L EDL+LYLFGTPGQ RFWFMWDD+VRGAIGAIVL D RRL D FAAVD+FE R L
Sbjct 77 GRVSLDEDLILYLFGTPGQYRFWFMWDDIVRGAIGAIVLTDTRRLADCFAAVDYFEQRQL 136
Query 131 PFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALA 186
PF+I +N FD R+ + VR+AL + +P+I DARNR S ALIAV E+ ++
Sbjct 137 PFVIGLNCFDGVLRHSIEDVREALQISPSVPIITCDARNRDSTKTALIAVVEHTMS 192
>gi|336179725|ref|YP_004585100.1| ATP binding protein [Frankia symbiont of Datisca glomerata]
gi|334860705|gb|AEH11179.1| protein of unknown function ATP binding protein [Frankia symbiont
of Datisca glomerata]
Length=198
Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/176 (65%), Positives = 138/176 (79%), Gaps = 0/176 (0%)
Query 11 TASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDF 70
T S KIV+AGGFG+GKTTFVG+VSEI+PLRTEA++T+A A VD L DK +TTVAMDF
Sbjct 17 TTSVKIVVAGGFGAGKTTFVGSVSEIVPLRTEAVMTEAGAHVDDLTHLADKTTTTVAMDF 76
Query 71 GRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNL 130
GR++L EDL+LYLFGTPGQ RFWFMWDD+VRGAIGAIVL D RRL D FAAVD+FE R L
Sbjct 77 GRVSLDEDLILYLFGTPGQYRFWFMWDDIVRGAIGAIVLADTRRLADCFAAVDYFEQRQL 136
Query 131 PFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALA 186
PF++ +N FD R+ + VR+AL + IP+I DARNR S ALIAV E+ ++
Sbjct 137 PFVVGVNCFDGILRHSIDDVREALQINPSIPIITCDARNRYSTKSALIAVVEHTMS 192
>gi|337768351|emb|CCB77064.1| putative ATP/GTP-binding protein [Streptomyces cattleya NRRL
8057]
Length=192
Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/178 (68%), Positives = 136/178 (77%), Gaps = 0/178 (0%)
Query 8 ASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVA 67
A T S KIV+AGGFG GKTTFVGAVSEI PLRTEA++T ASAG+D L PDK +TTVA
Sbjct 10 ARSTTSAKIVVAGGFGVGKTTFVGAVSEINPLRTEAVMTSASAGIDDLTHAPDKTTTTVA 69
Query 68 MDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEH 127
MDFGRITL EDL+LYLFGTPGQ RFWFMWDDLVRGAIGAIVLVD RRL D F AVD+FE+
Sbjct 70 MDFGRITLDEDLILYLFGTPGQDRFWFMWDDLVRGAIGAIVLVDTRRLADCFPAVDYFEN 129
Query 128 RNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
LPF+IA+N FD Y VR+AL + P+I DAR+R A ALI + E+AL
Sbjct 130 SGLPFVIALNGFDGNQPYAPEEVREALQIGPETPIITTDARHRGEAKSALITLVEHAL 187
>gi|256374614|ref|YP_003098274.1| hypothetical protein Amir_0461 [Actinosynnema mirum DSM 43827]
gi|255918917|gb|ACU34428.1| protein of unknown function ATP binding [Actinosynnema mirum
DSM 43827]
Length=202
Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/175 (64%), Positives = 141/175 (81%), Gaps = 0/175 (0%)
Query 11 TASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDF 70
T S KIV+AGGFG GKTTFVG+VSEI+PL TEA++T+ASAGVD L ATP+K +TTVAMDF
Sbjct 19 TTSAKIVVAGGFGVGKTTFVGSVSEIVPLTTEAVMTEASAGVDDLSATPNKVTTTVAMDF 78
Query 71 GRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNL 130
GR++L DL+LYLFGTPGQ RFWFMWDDLVRGAIGAIVLVD RRL D+FA++DFF+ R L
Sbjct 79 GRVSLDSDLILYLFGTPGQHRFWFMWDDLVRGAIGAIVLVDTRRLADAFASIDFFDDRQL 138
Query 131 PFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
P+++ +N FD + + VR+ALT+ +P++ DARNR+S LI + E+A+
Sbjct 139 PYVVGVNCFDGLLHHRIEDVREALTIDQSVPIVTCDARNRQSTKQTLITLVEHAM 193
>gi|297157275|gb|ADI06987.1| putative ATP/GTP-binding protein [Streptomyces bingchenggensis
BCW-1]
Length=208
Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/173 (67%), Positives = 140/173 (81%), Gaps = 0/173 (0%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
+TKIVIAGGFG GKTTFV +VSEI PL+TEA++T AS VD L ATP K +TTVAMDFGR
Sbjct 31 ATKIVIAGGFGVGKTTFVSSVSEITPLQTEALMTRASENVDDLAATPQKLTTTVAMDFGR 90
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
ITL DLVLYLFGTPGQ+RFWFMWDDL+RGAIGA+V+VD RRL+DSF A+D+FE LP+
Sbjct 91 ITLDSDLVLYLFGTPGQQRFWFMWDDLMRGAIGAVVMVDTRRLEDSFPALDYFESCGLPY 150
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
+IA+N F P Y VRDAL++PA +PV+ +DARNR S DAL+A+ +A+
Sbjct 151 VIAVNHFQGTPVYEPEDVRDALSVPAKVPVVIMDARNRISVVDALLALVRFAV 203
>gi|296268957|ref|YP_003651589.1| hypothetical protein Tbis_0973 [Thermobispora bispora DSM 43833]
gi|296091744|gb|ADG87696.1| protein of unknown function ATP binding protein [Thermobispora
bispora DSM 43833]
Length=194
Score = 238 bits (606), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/180 (63%), Positives = 141/180 (79%), Gaps = 0/180 (0%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
STKIV+AGGFG GKTTFVGAVSEI+PL TEA++TDASAG+D L TP+K +TTVAMDFGR
Sbjct 12 STKIVVAGGFGVGKTTFVGAVSEIVPLTTEAVMTDASAGIDDLRHTPNKTTTTVAMDFGR 71
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
++L +DL+LYLFGTPGQ RFWFMWDDLVRGAIGA+VLVD RRL D F A+D+FE LPF
Sbjct 72 LSLADDLILYLFGTPGQHRFWFMWDDLVRGAIGAVVLVDTRRLADCFPAIDYFEETQLPF 131
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATLSPAG 192
++A+N +D + VR+AL LP H+P++ DAR+R + LI++ EY L+ + G
Sbjct 132 IVAMNGWDGRFPHTEEEVREALALPEHVPIVRTDARSREAVKSTLISLVEYVLSLRTAYG 191
>gi|72161347|ref|YP_289004.1| ATP/GTP-binding protein [Thermobifida fusca YX]
gi|71915079|gb|AAZ54981.1| putative ATP/GTP-binding protein [Thermobifida fusca YX]
Length=195
Score = 238 bits (606), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/188 (63%), Positives = 142/188 (76%), Gaps = 7/188 (3%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
S KIV+AGGFG GKTTFVG+VSEI+PL TEA++T AS GVD L TPDK++TTVAMDFGR
Sbjct 3 SVKIVVAGGFGVGKTTFVGSVSEIVPLTTEAVMTSASVGVDDLAKTPDKQTTTVAMDFGR 62
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
++L DL+LYLFGTPGQ RFWFMWDDLV+GAIGA+VLVD RRL D F A+D+FE LPF
Sbjct 63 VSLDSDLILYLFGTPGQHRFWFMWDDLVKGAIGAVVLVDTRRLADCFPAIDYFEEAKLPF 122
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALAT----- 187
++AIN FDS + +S VRDALTL IP++ DAR+R S LI + E+A+A
Sbjct 123 IVAINGFDSYFPHSISEVRDALTLSEDIPIVQCDARDRASTKATLIRLVEHAIAVGDASA 182
Query 188 --LSPAGG 193
+P GG
Sbjct 183 EQTTPTGG 190
>gi|271963360|ref|YP_003337556.1| hypothetical protein Sros_1824 [Streptosporangium roseum DSM
43021]
gi|270506535|gb|ACZ84813.1| conserved hypothetical protein [Streptosporangium roseum DSM
43021]
Length=197
Score = 237 bits (604), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/180 (65%), Positives = 139/180 (78%), Gaps = 0/180 (0%)
Query 6 SEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTT 65
S G STKIV+AGGFG GKTTFVGAVSEI+PL TEA++TDASAG+D L TP+K +TT
Sbjct 7 SRGGGLTSTKIVVAGGFGVGKTTFVGAVSEILPLTTEAVMTDASAGIDDLGLTPNKTTTT 66
Query 66 VAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFF 125
VAMDFGR++L DL+LYLFGTPGQ RFWFMWDDLVRGAIGAIVLVD RRL DSF A+D+F
Sbjct 67 VAMDFGRVSLDRDLILYLFGTPGQHRFWFMWDDLVRGAIGAIVLVDTRRLADSFPAIDYF 126
Query 126 EHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
E LPF++A+N +D + VR+ALTL HIP+ DAR+R + LI + E+AL
Sbjct 127 EEAKLPFVVAVNGWDGTYLHGEEEVREALTLAPHIPISRTDARSRDAVKATLITLVEHAL 186
>gi|302525625|ref|ZP_07277967.1| ATP/GTP-binding protein [Streptomyces sp. AA4]
gi|302434520|gb|EFL06336.1| ATP/GTP-binding protein [Streptomyces sp. AA4]
Length=203
Score = 236 bits (603), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 109/173 (64%), Positives = 138/173 (80%), Gaps = 0/173 (0%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
S KIV+AGGFG+GKTTFVG+VSEI+PL TEAM+TDAS G+D L+ TP K +TTVAMDFGR
Sbjct 19 SAKIVVAGGFGAGKTTFVGSVSEIVPLTTEAMMTDASRGIDNLDQTPYKTTTTVAMDFGR 78
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
++L DL+LYLFGTPGQ+RFWFMWDDLVRGAIGA+VL D RRL DSFA +DFFE R LP+
Sbjct 79 VSLDADLILYLFGTPGQQRFWFMWDDLVRGAIGAVVLADTRRLADSFAPIDFFEDRGLPY 138
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
++ +N FD + ++ VR+AL++ + IP++ DAR R S LI + EYA+
Sbjct 139 IVGVNTFDGVLEHDINDVREALSIDSSIPIVRCDARERESTKQTLITLVEYAM 191
>gi|331699468|ref|YP_004335707.1| hypothetical protein Psed_5727 [Pseudonocardia dioxanivorans
CB1190]
gi|326954157|gb|AEA27854.1| protein of unknown function ATP binding protein [Pseudonocardia
dioxanivorans CB1190]
Length=198
Score = 236 bits (602), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/177 (62%), Positives = 140/177 (80%), Gaps = 0/177 (0%)
Query 9 SGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAM 68
+ T S KIV+AGGFG GKTTFVG+VSEI+PL TEA++T+ASAG D L ATP+K +TTVAM
Sbjct 14 TATISAKIVVAGGFGVGKTTFVGSVSEIVPLTTEAVMTEASAGHDDLSATPNKSTTTVAM 73
Query 69 DFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHR 128
DFGR++L DL+LYLFGTPGQ RFWFMWDDLVRGAIGA+VLVD RRL DSF A+DFFE R
Sbjct 74 DFGRVSLDSDLILYLFGTPGQHRFWFMWDDLVRGAIGAVVLVDTRRLADSFGAIDFFEDR 133
Query 129 NLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
LP+++ +N FD ++ + VR+A+ + +P++ DARNR S LI++ E+A+
Sbjct 134 GLPYVVGLNAFDGMLQHRIEDVREAMAIDPSVPILTCDARNRESTKQTLISLVEHAM 190
>gi|326332161|ref|ZP_08198442.1| ATP/GTP-binding protein [Nocardioidaceae bacterium Broad-1]
gi|326332169|ref|ZP_08198449.1| ATP/GTP-binding protein [Nocardioidaceae bacterium Broad-1]
gi|325949875|gb|EGD41935.1| ATP/GTP-binding protein [Nocardioidaceae bacterium Broad-1]
gi|325950044|gb|EGD42103.1| ATP/GTP-binding protein [Nocardioidaceae bacterium Broad-1]
Length=192
Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/181 (61%), Positives = 140/181 (78%), Gaps = 0/181 (0%)
Query 9 SGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAM 68
T S KIVIAGGFG GKTTFVG+VSEI+PL TEA++T A+AGVD L A P+K++TTVAM
Sbjct 7 QATMSAKIVIAGGFGVGKTTFVGSVSEIVPLTTEAVMTQATAGVDDLSAVPNKKTTTVAM 66
Query 69 DFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHR 128
DFGR++L DL+LYLFGTPGQ RFWFMWDDL +GAIGA+VL+D RRL DSF A+D+FE R
Sbjct 67 DFGRVSLDSDLILYLFGTPGQNRFWFMWDDLTQGAIGAVVLIDTRRLADSFGAIDYFESR 126
Query 129 NLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATL 188
N+PF++A N F + Y +R+AL L IP++ DAR+R+S LI++ EY L+ +
Sbjct 127 NVPFVVAHNVFGANQAYKPEQIREALALRPDIPIVTCDARDRQSTKATLISLVEYVLSMV 186
Query 189 S 189
S
Sbjct 187 S 187
>gi|329939745|ref|ZP_08289046.1| ATP/GTP-binding protein [Streptomyces griseoaurantiacus M045]
gi|329301315|gb|EGG45210.1| ATP/GTP-binding protein [Streptomyces griseoaurantiacus M045]
Length=213
Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/189 (61%), Positives = 146/189 (78%), Gaps = 1/189 (0%)
Query 2 ALKHSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDK 61
A + + +TKIV+AGGFG GKTT V AVSEI PL+TEA++T+ASAG D L TP+K
Sbjct 25 AWQTDRSRAPVATKIVVAGGFGVGKTTLVTAVSEITPLQTEALMTEASAGTDDLSDTPEK 84
Query 62 RSTTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAA 121
+TTVAMD+GR+TL +DLVLY+FGTPGQ+RFWFMWDDLVRGAIGA+VL D RRL D F A
Sbjct 85 LTTTVAMDYGRLTLDDDLVLYVFGTPGQQRFWFMWDDLVRGAIGAVVLADTRRLADCFPA 144
Query 122 VDFFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVS 181
+D+FE LP+++A+N FD + RY VR+ALT+PAHIPV+ +DAR R SA + L+ +
Sbjct 145 LDYFESCGLPYIVAVNHFDGSERYEPEDVREALTIPAHIPVMIMDARKRISAIETLLGLV 204
Query 182 EYALATLSP 190
+AL +SP
Sbjct 205 RHALE-MSP 212
>gi|134097300|ref|YP_001102961.1| ATP/GTP-binding protein [Saccharopolyspora erythraea NRRL 2338]
gi|291009408|ref|ZP_06567381.1| ATP/GTP-binding protein [Saccharopolyspora erythraea NRRL 2338]
gi|133909923|emb|CAM00035.1| ATP/GTP-binding protein [Saccharopolyspora erythraea NRRL 2338]
Length=223
Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/182 (62%), Positives = 142/182 (79%), Gaps = 0/182 (0%)
Query 4 KHSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRS 63
+ + GT S KIV+AGGFG GKTTFVG+VSEI+PL TEA++T+AS GVD L ATP+K S
Sbjct 17 QPQSSRGTTSAKIVVAGGFGVGKTTFVGSVSEIVPLTTEAVMTEASRGVDDLAATPNKTS 76
Query 64 TTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVD 123
TTVAMDFGRI+L DL+LYLFGTPGQ+RFWFMWDDLVRGAIGA+VLVD RRL DSF+AVD
Sbjct 77 TTVAMDFGRISLDSDLILYLFGTPGQQRFWFMWDDLVRGAIGAVVLVDTRRLADSFSAVD 136
Query 124 FFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEY 183
FFE R LP+LI +N FD + + +R+A+ + +P+ DAR++ S LIA+ ++
Sbjct 137 FFEDRGLPYLIGVNCFDGQLMHSIEQIREAMAIGPDVPIGPCDARDKESTKQTLIALVQH 196
Query 184 AL 185
A+
Sbjct 197 AM 198
>gi|345009293|ref|YP_004811647.1| ATP-binding protein [Streptomyces violaceusniger Tu 4113]
gi|344035642|gb|AEM81367.1| ATP-binding protein of unknown function [Streptomyces violaceusniger
Tu 4113]
Length=221
Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/173 (65%), Positives = 141/173 (82%), Gaps = 0/173 (0%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
+TKIVIAGGFG GKTTFVGAVSEI PL+TEA++T AS VD LEATP+K +TTVAMDFGR
Sbjct 44 ATKIVIAGGFGVGKTTFVGAVSEITPLQTEALMTQASESVDDLEATPEKLTTTVAMDFGR 103
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
ITL DLVLYLFGTPGQ+RFWFMWDDL+RGAIGA+V+VD RRL +SF A+D+FE LP+
Sbjct 104 ITLENDLVLYLFGTPGQQRFWFMWDDLMRGAIGAVVMVDTRRLDESFPALDYFESLGLPY 163
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
++A+N F+ P Y VRDAL++ + +PV+ +DAR R + DAL+A+ +A+
Sbjct 164 VVAVNHFEGTPLYEPEDVRDALSVASTVPVVMMDARRRIAVVDALLALVRHAV 216
>gi|182436007|ref|YP_001823726.1| putative ATP/GTP-binding protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326776631|ref|ZP_08235896.1| ATP binding protein [Streptomyces cf. griseus XylebKG-1]
gi|178464523|dbj|BAG19043.1| putative ATP/GTP-binding protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326656964|gb|EGE41810.1| ATP binding protein [Streptomyces griseus XylebKG-1]
Length=216
Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/183 (61%), Positives = 144/183 (79%), Gaps = 2/183 (1%)
Query 3 LKHSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKR 62
L H+ A +TKIV+AGGFG GKTTFVG+VSEI PL+TEA++T AS D L ATP+K
Sbjct 31 LDHTRAP--TATKIVVAGGFGVGKTTFVGSVSEITPLQTEALMTQASEETDDLSATPEKT 88
Query 63 STTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAV 122
+TTVAMDFGR+TL +DLVLY+FGTPGQ+RFWFMWDDLVRGAIGA+VL D RRL+D F A+
Sbjct 89 TTTVAMDFGRLTLEDDLVLYVFGTPGQQRFWFMWDDLVRGAIGAVVLADTRRLEDCFPAL 148
Query 123 DFFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSE 182
D+FE LP+++A+N F+ P Y VR+ALT+P +P++ +DARNR + ++L+A+
Sbjct 149 DYFESCGLPYIVAVNHFEGTPGYEAEDVREALTVPPQVPIVIMDARNRITVVESLLALVG 208
Query 183 YAL 185
+AL
Sbjct 209 HAL 211
>gi|297559792|ref|YP_003678766.1| hypothetical protein Ndas_0816 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844240|gb|ADH66260.1| protein of unknown function ATP binding protein [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length=197
Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/180 (63%), Positives = 136/180 (76%), Gaps = 0/180 (0%)
Query 13 STKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDFGR 72
S KIV+AGGFG GKTTFVG+VSEI+PL TEA++T AS GVD L TPDK++TTVAMDFGR
Sbjct 3 SVKIVVAGGFGVGKTTFVGSVSEIVPLTTEAVMTSASVGVDDLAKTPDKQTTTVAMDFGR 62
Query 73 ITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNLPF 132
++L DL+LYLFGTPGQ RFWFMWDDLV+GAIGA+VLVD RRL D F A+D+FE LPF
Sbjct 63 VSLDSDLILYLFGTPGQHRFWFMWDDLVKGAIGAVVLVDTRRLADCFPAIDYFEEARLPF 122
Query 133 LIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYALATLSPAG 192
++ IN FD + VRDALTL IP++ VDAR++ S LI + E+A+ P G
Sbjct 123 IVGINGFDGYYPHAADEVRDALTLSPEIPIVQVDARDKASTKSTLITLVEHAITVGDPEG 182
>gi|291447717|ref|ZP_06587107.1| ATP/GTP-binding protein [Streptomyces roseosporus NRRL 15998]
gi|291350664|gb|EFE77568.1| ATP/GTP-binding protein [Streptomyces roseosporus NRRL 15998]
Length=203
Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/183 (61%), Positives = 144/183 (79%), Gaps = 2/183 (1%)
Query 3 LKHSEASGTASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKR 62
L H+ A +TKIV+AGGFG GKTTFVG+VSEI PL+TEA++T AS D L ATPDK
Sbjct 18 LDHTRAP--TATKIVVAGGFGVGKTTFVGSVSEITPLQTEALMTQASEETDDLSATPDKV 75
Query 63 STTVAMDFGRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAV 122
+TTVAMDFGR+TL +DLVLY+FGTPGQ+RFWFMWDDLVRGAIGA+VL D RRL+D F A+
Sbjct 76 TTTVAMDFGRLTLDDDLVLYVFGTPGQQRFWFMWDDLVRGAIGAVVLADTRRLEDCFPAL 135
Query 123 DFFEHRNLPFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSE 182
D+FE LP+++A+N F+ P Y VR+ALT+P +P++ +DARNR + ++L+A+
Sbjct 136 DYFESCGLPYIVAVNHFEGTPGYEAEDVREALTVPPRVPIVIMDARNRITVVESLLALVG 195
Query 183 YAL 185
+AL
Sbjct 196 HAL 198
>gi|302537136|ref|ZP_07289478.1| ATP/GTP-binding protein [Streptomyces sp. C]
gi|302446031|gb|EFL17847.1| ATP/GTP-binding protein [Streptomyces sp. C]
Length=194
Score = 234 bits (598), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/175 (67%), Positives = 136/175 (78%), Gaps = 0/175 (0%)
Query 11 TASTKIVIAGGFGSGKTTFVGAVSEIMPLRTEAMVTDASAGVDMLEATPDKRSTTVAMDF 70
T S KIV+AGGFG GKTTFVGAVSEI PLRTEA++T ASAG+D L T DK++TTVAMDF
Sbjct 15 TTSAKIVVAGGFGVGKTTFVGAVSEINPLRTEAVMTSASAGIDDLTHTGDKKTTTVAMDF 74
Query 71 GRITLGEDLVLYLFGTPGQRRFWFMWDDLVRGAIGAIVLVDCRRLQDSFAAVDFFEHRNL 130
GRITL +DL+LYLFGTPGQ RFWFMWDDLVRGAIGA+VLVD RRL D F AVD+FE+ L
Sbjct 75 GRITLDQDLILYLFGTPGQDRFWFMWDDLVRGAIGAVVLVDTRRLADCFPAVDYFENSGL 134
Query 131 PFLIAINEFDSAPRYPVSAVRDALTLPAHIPVINVDARNRRSATDALIAVSEYAL 185
PF+IA+N FD Y VR+AL + P+I DAR+R A ALI + E+AL
Sbjct 135 PFVIALNGFDGHQPYTPEEVREALQIGPDAPIITTDARHRADAKSALITLVEHAL 189
Lambda K H
0.322 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 195783124132
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40