BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3363c Length=122 Score E Sequences producing significant alignments: (Bits) Value gi|339296189|gb|AEJ48300.1| hypothetical protein CCDC5079_3111 [... 240 5e-62 gi|289752080|ref|ZP_06511458.1| conserved hypothetical protein [... 240 6e-62 gi|15610499|ref|NP_217880.1| hypothetical protein Rv3363c [Mycob... 239 8e-62 gi|289752073|ref|ZP_06511451.1| conserved hypothetical protein [... 218 2e-55 gi|183981189|ref|YP_001849480.1| hypothetical protein MMAR_1167 ... 177 3e-43 gi|296168826|ref|ZP_06850502.1| conserved hypothetical protein [... 177 6e-43 gi|240169065|ref|ZP_04747724.1| hypothetical protein MkanA1_0711... 175 2e-42 gi|342861576|ref|ZP_08718223.1| hypothetical protein MCOL_21926 ... 173 6e-42 gi|118464505|ref|YP_883465.1| hypothetical protein MAV_4329 [Myc... 167 4e-40 gi|41409568|ref|NP_962404.1| hypothetical protein MAP3470c [Myco... 164 4e-39 gi|254822559|ref|ZP_05227560.1| hypothetical protein MintA_21699... 159 1e-37 gi|333991838|ref|YP_004524452.1| hypothetical protein JDM601_319... 157 6e-37 gi|118472605|ref|YP_886016.1| hypothetical protein MSMEG_1639 [M... 146 1e-33 gi|108798162|ref|YP_638359.1| hypothetical protein Mmcs_1191 [My... 146 1e-33 gi|118618273|ref|YP_906605.1| hypothetical protein MUL_2848 [Myc... 144 4e-33 gi|120402546|ref|YP_952375.1| hypothetical protein Mvan_1538 [My... 137 4e-31 gi|145225463|ref|YP_001136141.1| hypothetical protein Mflv_4887 ... 134 4e-30 gi|84494308|ref|ZP_00993427.1| hypothetical protein JNB_05919 [J... 115 3e-24 gi|111020666|ref|YP_703638.1| hypothetical protein RHA1_ro03677 ... 111 4e-23 gi|226362906|ref|YP_002780686.1| hypothetical protein ROP_34940 ... 109 1e-22 gi|54026941|ref|YP_121183.1| hypothetical protein nfa49670 [Noca... 108 2e-22 gi|54022636|ref|YP_116878.1| hypothetical protein nfa6690 [Nocar... 108 2e-22 gi|229488636|ref|ZP_04382502.1| conserved hypothetical protein [... 105 3e-21 gi|226308033|ref|YP_002767993.1| hypothetical protein RER_45460 ... 104 4e-21 gi|300789292|ref|YP_003769583.1| hypothetical protein AMED_7467 ... 91.3 4e-17 gi|54023643|ref|YP_117885.1| hypothetical protein nfa16750 [Noca... 90.1 1e-16 gi|300785210|ref|YP_003765501.1| hypothetical protein AMED_3310 ... 80.9 6e-14 gi|302530577|ref|ZP_07282919.1| hypothetical protein SSMG_06959 ... 77.0 9e-13 gi|238061068|ref|ZP_04605777.1| hypothetical protein MCAG_02034 ... 76.3 1e-12 gi|300790333|ref|YP_003770624.1| hypothetical protein AMED_8527 ... 75.9 2e-12 gi|291302719|ref|YP_003513997.1| hypothetical protein Snas_5270 ... 74.7 4e-12 gi|302554374|ref|ZP_07306716.1| conserved hypothetical protein [... 74.3 5e-12 gi|302558194|ref|ZP_07310536.1| conserved hypothetical protein [... 74.3 6e-12 gi|291437060|ref|ZP_06576450.1| conserved hypothetical protein [... 73.9 7e-12 gi|330470118|ref|YP_004407861.1| hypothetical protein VAB18032_0... 73.9 7e-12 gi|226361166|ref|YP_002778944.1| hypothetical protein ROP_17520 ... 73.9 7e-12 gi|238062616|ref|ZP_04607325.1| hypothetical protein MCAG_03582 ... 73.2 1e-11 gi|330465708|ref|YP_004403451.1| hypothetical protein VAB18032_0... 73.2 1e-11 gi|302865293|ref|YP_003833930.1| hypothetical protein Micau_0790... 72.8 1e-11 gi|315501837|ref|YP_004080724.1| hypothetical protein ML5_1033 [... 72.8 2e-11 gi|145593376|ref|YP_001157673.1| hypothetical protein Strop_0818... 72.0 2e-11 gi|254392490|ref|ZP_05007670.1| conserved hypothetical protein [... 71.6 4e-11 gi|159036419|ref|YP_001535672.1| hypothetical protein Sare_0762 ... 70.9 6e-11 gi|257057804|ref|YP_003135636.1| hypothetical protein Svir_38650... 70.1 1e-10 gi|297191849|ref|ZP_06909247.1| conserved hypothetical protein [... 69.7 1e-10 gi|134097170|ref|YP_001102831.1| hypothetical protein SACE_0559 ... 69.7 1e-10 gi|340529324|gb|AEK44529.1| hypothetical protein RAM_30270 [Amyc... 69.7 1e-10 gi|295836344|ref|ZP_06823277.1| conserved hypothetical protein [... 69.7 1e-10 gi|297191853|ref|ZP_06909251.1| conserved hypothetical protein [... 69.7 1e-10 gi|288919724|ref|ZP_06414051.1| protein of unknown function DUF7... 69.3 2e-10 >gi|339296189|gb|AEJ48300.1| hypothetical protein CCDC5079_3111 [Mycobacterium tuberculosis CCDC5079] gi|339299792|gb|AEJ51902.1| hypothetical protein CCDC5180_3065 [Mycobacterium tuberculosis CCDC5180] Length=129 Score = 240 bits (613), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 122/122 (100%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 1 LFNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLC 60 LFNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLC Sbjct 8 LFNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLC 67 Query 61 IGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLK 120 IGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLK Sbjct 68 IGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLK 127 Query 121 AL 122 AL Sbjct 128 AL 129 >gi|289752080|ref|ZP_06511458.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289692667|gb|EFD60096.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=134 Score = 240 bits (612), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 122/122 (100%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 1 LFNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLC 60 LFNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLC Sbjct 13 LFNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLC 72 Query 61 IGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLK 120 IGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLK Sbjct 73 IGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLK 132 Query 121 AL 122 AL Sbjct 133 AL 134 >gi|15610499|ref|NP_217880.1| hypothetical protein Rv3363c [Mycobacterium tuberculosis H37Rv] gi|15842959|ref|NP_337996.1| hypothetical protein MT3471 [Mycobacterium tuberculosis CDC1551] gi|31794546|ref|NP_857039.1| hypothetical protein Mb3398c [Mycobacterium bovis AF2122/97] 76 more sequence titles Length=122 Score = 239 bits (611), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 121/122 (99%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 1 LFNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLC 60 +FNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLC Sbjct 1 MFNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLC 60 Query 61 IGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLK 120 IGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLK Sbjct 61 IGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLK 120 Query 121 AL 122 AL Sbjct 121 AL 122 >gi|289752073|ref|ZP_06511451.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289692660|gb|EFD60089.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=119 Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 115/119 (97%), Positives = 116/119 (98%), Gaps = 1/119 (0%) Query 4 PAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGS 63 PA DR +A LVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGS Sbjct 2 PAIDRRRA-LVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGS 60 Query 64 PSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 PSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL Sbjct 61 PSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 119 >gi|183981189|ref|YP_001849480.1| hypothetical protein MMAR_1167 [Mycobacterium marinum M] gi|183174515|gb|ACC39625.1| conserved hypothetical protein [Mycobacterium marinum M] Length=128 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 93/113 (83%), Positives = 100/113 (89%), Gaps = 0/113 (0%) Query 10 KAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEI 69 +A LVRPY LTAGRTGTD+DLPL+APVQT AG A RW D+R RI+QLC+ PSVAEI Sbjct 16 EASLVRPYALTAGRTGTDIDLPLEAPVQTSRAGLARRWQPSDVRGRIVQLCLTCPSVAEI 75 Query 70 SARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 SARLDLPVGVARVLVGDLVTS YLRVHATLT+RSTRDERHELIGRTLRGLKAL Sbjct 76 SARLDLPVGVARVLVGDLVTSDYLRVHATLTERSTRDERHELIGRTLRGLKAL 128 >gi|296168826|ref|ZP_06850502.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896501|gb|EFG76149.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=124 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 89/113 (79%), Positives = 100/113 (89%), Gaps = 0/113 (0%) Query 10 KAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEI 69 K LVRPYTLT+GRTGTDV+LP++AP+QTL AG A RWP D + +I+QLC GSPSVAEI Sbjct 12 KGNLVRPYTLTSGRTGTDVELPVEAPIQTLQAGLAHRWPPDDAKGKIIQLCTGSPSVAEI 71 Query 70 SARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 SARLDLP+GV RVLVGDLV SGYLRVH TL++RSTRDERHELIGRTLRGLKAL Sbjct 72 SARLDLPLGVTRVLVGDLVLSGYLRVHRTLSERSTRDERHELIGRTLRGLKAL 124 >gi|240169065|ref|ZP_04747724.1| hypothetical protein MkanA1_07114 [Mycobacterium kansasii ATCC 12478] Length=127 Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 93/118 (79%), Positives = 101/118 (86%), Gaps = 3/118 (2%) Query 8 RPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCI---GSP 64 RP A LVRPYTLTAGRTGTD+DLPL+A VQ LPAG A RWP +DMR RI++LC SP Sbjct 10 RPGANLVRPYTLTAGRTGTDIDLPLEAAVQALPAGSAHRWPPHDMRGRIIRLCADSPSSP 69 Query 65 SVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 SVAEI+ARLDLPVGVARVLVGDLV+S YLRV ATLTDRST DER ELIGRTLRGL+AL Sbjct 70 SVAEIAARLDLPVGVARVLVGDLVSSDYLRVQATLTDRSTSDERRELIGRTLRGLQAL 127 >gi|342861576|ref|ZP_08718223.1| hypothetical protein MCOL_21926 [Mycobacterium colombiense CECT 3035] gi|342131065|gb|EGT84354.1| hypothetical protein MCOL_21926 [Mycobacterium colombiense CECT 3035] Length=124 Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 88/113 (78%), Positives = 97/113 (86%), Gaps = 0/113 (0%) Query 10 KAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEI 69 K LVRPYTLT+GRT T VDLPL+AP+QTL AG RWP D R RI+QLC+ PSVAEI Sbjct 12 KGNLVRPYTLTSGRTDTKVDLPLEAPIQTLQAGLTHRWPPNDARGRIIQLCVEHPSVAEI 71 Query 70 SARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 SARLDLP+GVARVLVGDLV SGYLRVH TL++RSTRDERHELIGRTLRGL+AL Sbjct 72 SARLDLPLGVARVLVGDLVLSGYLRVHKTLSERSTRDERHELIGRTLRGLRAL 124 >gi|118464505|ref|YP_883465.1| hypothetical protein MAV_4329 [Mycobacterium avium 104] gi|254776757|ref|ZP_05218273.1| hypothetical protein MaviaA2_19121 [Mycobacterium avium subsp. avium ATCC 25291] gi|118165792|gb|ABK66689.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336459776|gb|EGO38691.1| Protein of unknown function (DUF742) [Mycobacterium avium subsp. paratuberculosis S397] Length=124 Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 86/113 (77%), Positives = 97/113 (86%), Gaps = 0/113 (0%) Query 10 KAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEI 69 LVRPYTLT+GRT T VDLP++AP+QTL AG RWP D R RI++LC+ SPSVAEI Sbjct 12 SGNLVRPYTLTSGRTDTTVDLPVEAPIQTLQAGLTHRWPPGDARGRIVRLCLDSPSVAEI 71 Query 70 SARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 SARLDLP+GVARVLVGDLV SGYLRVH TL++RSTRDERHELIGRTLRGL+AL Sbjct 72 SARLDLPLGVARVLVGDLVLSGYLRVHKTLSERSTRDERHELIGRTLRGLRAL 124 >gi|41409568|ref|NP_962404.1| hypothetical protein MAP3470c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398399|gb|AAS06020.1| hypothetical protein MAP_3470c [Mycobacterium avium subsp. paratuberculosis K-10] Length=124 Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 85/113 (76%), Positives = 96/113 (85%), Gaps = 0/113 (0%) Query 10 KAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEI 69 LVRPYTLT+GRT T VDLP++A +QTL AG RWP D R RI++LC+ SPSVAEI Sbjct 12 SGNLVRPYTLTSGRTDTTVDLPVEALIQTLQAGLTHRWPPGDARGRIVRLCLDSPSVAEI 71 Query 70 SARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 SARLDLP+GVARVLVGDLV SGYLRVH TL++RSTRDERHELIGRTLRGL+AL Sbjct 72 SARLDLPLGVARVLVGDLVLSGYLRVHKTLSERSTRDERHELIGRTLRGLRAL 124 >gi|254822559|ref|ZP_05227560.1| hypothetical protein MintA_21699 [Mycobacterium intracellulare ATCC 13950] Length=127 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 86/116 (75%), Positives = 97/116 (84%), Gaps = 3/116 (2%) Query 10 KAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIG---SPSV 66 K LVRPYTLT+GRT T+V+LPL+AP+QTL G R+P D R RI+QLC SPSV Sbjct 12 KGNLVRPYTLTSGRTDTNVELPLEAPLQTLQPGAPHRYPPNDARGRIIQLCGQGPPSPSV 71 Query 67 AEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 AEISARLDLP+GVARVLVGDLV SGYLRVH TL++RSTRDERHELIGRTLRGL+AL Sbjct 72 AEISARLDLPLGVARVLVGDLVLSGYLRVHRTLSERSTRDERHELIGRTLRGLRAL 127 >gi|333991838|ref|YP_004524452.1| hypothetical protein JDM601_3198 [Mycobacterium sp. JDM601] gi|333487806|gb|AEF37198.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=130 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 83/113 (74%), Positives = 95/113 (85%), Gaps = 0/113 (0%) Query 10 KAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEI 69 +A LVRPYTLTAGRT T+V+LPL+APVQT+ +WPA D R RI++LC PSVAEI Sbjct 17 EASLVRPYTLTAGRTHTEVNLPLEAPVQTVRPAQPNQWPAGDPRGRIVELCQTGPSVAEI 76 Query 70 SARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 +ARLDLPVGVARVLVGDLVTSGYLRV TL++ STRDER ELIGRTLRGL+AL Sbjct 77 AARLDLPVGVARVLVGDLVTSGYLRVRRTLSEASTRDERRELIGRTLRGLRAL 129 >gi|118472605|ref|YP_886016.1| hypothetical protein MSMEG_1639 [Mycobacterium smegmatis str. MC2 155] gi|118173892|gb|ABK74788.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=121 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 75/113 (67%), Positives = 89/113 (79%), Gaps = 0/113 (0%) Query 10 KAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEI 69 + LVRPYTLTAGRT V+LPL+APV+TL A WP D+R +I++LC GSPSVAEI Sbjct 9 EPNLVRPYTLTAGRTAPPVNLPLEAPVETLDTPNAPTWPGRDVRGQIVELCTGSPSVAEI 68 Query 70 SARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 +A L LP+GVARVL+GDLV GYLRVH TL D ++ DER ELIGRTLRGL+AL Sbjct 69 AAHLSLPLGVARVLIGDLVKQGYLRVHTTLEDSASFDERRELIGRTLRGLRAL 121 >gi|108798162|ref|YP_638359.1| hypothetical protein Mmcs_1191 [Mycobacterium sp. MCS] gi|119867258|ref|YP_937210.1| hypothetical protein Mkms_1208 [Mycobacterium sp. KMS] gi|126433821|ref|YP_001069512.1| hypothetical protein Mjls_1218 [Mycobacterium sp. JLS] gi|108768581|gb|ABG07303.1| protein of unknown function DUF742 [Mycobacterium sp. MCS] gi|119693347|gb|ABL90420.1| protein of unknown function DUF742 [Mycobacterium sp. KMS] gi|126233621|gb|ABN97021.1| protein of unknown function DUF742 [Mycobacterium sp. JLS] Length=114 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 78/110 (71%), Positives = 88/110 (80%), Gaps = 0/110 (0%) Query 13 LVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEISAR 72 LVRPYTLTAGRT + V LPL+AP++TL A RWPA D+R IL LC PSVAEI+AR Sbjct 5 LVRPYTLTAGRTDSRVHLPLEAPIETLDAARPPRWPAGDVRGDILALCAARPSVAEIAAR 64 Query 73 LDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 L +P+GVARVLVGDLVT GYLRVHATL +T DER ELIGRTLRGL+AL Sbjct 65 LSVPLGVARVLVGDLVTQGYLRVHATLDQSATSDERRELIGRTLRGLRAL 114 >gi|118618273|ref|YP_906605.1| hypothetical protein MUL_2848 [Mycobacterium ulcerans Agy99] gi|118570383|gb|ABL05134.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=91 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 75/91 (83%), Positives = 81/91 (90%), Gaps = 0/91 (0%) Query 32 LQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEISARLDLPVGVARVLVGDLVTSG 91 ++APVQT AG A RW D+R RI+QLC+ SPSVAEISARLDLPVGVARVLVGDLVTS Sbjct 1 MEAPVQTSRAGLARRWQPSDVRGRIVQLCLTSPSVAEISARLDLPVGVARVLVGDLVTSD 60 Query 92 YLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 YLRVHATLT+RSTRDERHELIGRTLRGLKAL Sbjct 61 YLRVHATLTERSTRDERHELIGRTLRGLKAL 91 >gi|120402546|ref|YP_952375.1| hypothetical protein Mvan_1538 [Mycobacterium vanbaalenii PYR-1] gi|119955364|gb|ABM12369.1| protein of unknown function DUF742 [Mycobacterium vanbaalenii PYR-1] Length=125 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 73/120 (61%), Positives = 87/120 (73%), Gaps = 0/120 (0%) Query 3 NPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIG 62 P + + LVRPYTLTAGRT + V LPL+APV + RWP D+R +IL+LC Sbjct 6 KPERESAEPSLVRPYTLTAGRTASTVRLPLEAPVGVVSPQQPPRWPGSDVRGQILELCAE 65 Query 63 SPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 PSVAEI+A L LP+GVARVLVGDLV GY+RVH TL + +T DER ELIGRTLRGL+AL Sbjct 66 RPSVAEIAAHLSLPLGVARVLVGDLVVQGYVRVHTTLGEVATADERRELIGRTLRGLRAL 125 >gi|145225463|ref|YP_001136141.1| hypothetical protein Mflv_4887 [Mycobacterium gilvum PYR-GCK] gi|315445816|ref|YP_004078695.1| hypothetical protein Mspyr1_43030 [Mycobacterium sp. Spyr1] gi|145217949|gb|ABP47353.1| protein of unknown function DUF742 [Mycobacterium gilvum PYR-GCK] gi|315264119|gb|ADU00861.1| Protein of unknown function (DUF742) [Mycobacterium sp. Spyr1] Length=122 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 72/114 (64%), Positives = 85/114 (75%), Gaps = 0/114 (0%) Query 9 PKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAE 68 P LVRPYTLT+GRT + V LPL+APV + P WPA D+R RI+ LC PSVAE Sbjct 9 PAPSLVRPYTLTSGRTESGVTLPLEAPVGLAKSAPPPGWPAGDVRSRIVALCDARPSVAE 68 Query 69 ISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 I+A L +P+GVARVLVGDLV GYL+VHATL + +T DER LIGRTLRGL+AL Sbjct 69 IAAHLSVPLGVARVLVGDLVLQGYLQVHATLGEAATPDERRALIGRTLRGLRAL 122 >gi|84494308|ref|ZP_00993427.1| hypothetical protein JNB_05919 [Janibacter sp. HTCC2649] gi|84383801|gb|EAP99681.1| hypothetical protein JNB_05919 [Janibacter sp. HTCC2649] Length=126 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 62/115 (54%), Positives = 78/115 (68%), Gaps = 1/115 (0%) Query 9 PKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAE 68 P AG+VRPY LT+GRT + V LP++A VQ LP W +D RI+ C SVAE Sbjct 12 PTAGIVRPYALTSGRTQSSVHLPVEAMVQQLPRAHQREWAGHDQLDRIVLACEERTSVAE 71 Query 69 ISARLDLPVGVARVLVGDLVTSGYLRVHA-TLTDRSTRDERHELIGRTLRGLKAL 122 I+A++ LP+GV RVL+GDL+ GYL A TLTD ST ER +LI RTLRGL+A+ Sbjct 72 IAAKVGLPLGVVRVLLGDLIEDGYLETAAVTLTDSSTLSERKDLIERTLRGLRAI 126 >gi|111020666|ref|YP_703638.1| hypothetical protein RHA1_ro03677 [Rhodococcus jostii RHA1] gi|110820196|gb|ABG95480.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=124 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 58/117 (50%), Positives = 80/117 (69%), Gaps = 0/117 (0%) Query 6 GDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPS 65 ++P +VRPY+LT+GRT V+L L+A +Q LP +W D+ I+ LC SPS Sbjct 8 SEQPGPNIVRPYSLTSGRTRPAVELALEALIQALPQSVDRQWELDDVNAAIVALCQQSPS 67 Query 66 VAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 VAEI+AR+ +P+GVARVLV DLV +G+L++ ATL + ST ER ELI R L GL+ + Sbjct 68 VAEIAARVGVPLGVARVLVADLVEAGHLQILATLKEDSTDSERRELIERVLSGLREI 124 >gi|226362906|ref|YP_002780686.1| hypothetical protein ROP_34940 [Rhodococcus opacus B4] gi|226241393|dbj|BAH51741.1| hypothetical protein [Rhodococcus opacus B4] Length=124 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/117 (50%), Positives = 79/117 (68%), Gaps = 0/117 (0%) Query 6 GDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPS 65 +R +VRPY+LT+GRT V+L L+A +Q LP +W D+ I+ LC SPS Sbjct 8 SERQGPNIVRPYSLTSGRTRPAVELALEALIQALPQSVDRQWELDDVNAAIVALCQQSPS 67 Query 66 VAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 VAEI+AR+ +P+GVARVLV DLV +G+L++ ATL + ST ER ELI R L GL+ + Sbjct 68 VAEIAARVGVPLGVARVLVADLVEAGHLQILATLKEDSTDSERRELIERVLSGLREI 124 >gi|54026941|ref|YP_121183.1| hypothetical protein nfa49670 [Nocardia farcinica IFM 10152] gi|54018449|dbj|BAD59819.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=124 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/109 (53%), Positives = 78/109 (72%), Gaps = 0/109 (0%) Query 14 VRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEISARL 73 VRPY LT+GRT VDLPL+A ++T+ WP D+R I++L SVAEI+A+L Sbjct 16 VRPYALTSGRTEPAVDLPLEAVIETISYTAHLEWPVGDIRTDIVRLGTARLSVAEITAKL 75 Query 74 DLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 P+G+ RV++GDLV +G LRVH TL+D+++ DER L+ RTLRGL+AL Sbjct 76 QRPLGLVRVVIGDLVVAGTLRVHWTLSDQASYDERLSLMERTLRGLRAL 124 >gi|54022636|ref|YP_116878.1| hypothetical protein nfa6690 [Nocardia farcinica IFM 10152] gi|54014144|dbj|BAD55514.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=124 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/109 (52%), Positives = 77/109 (71%), Gaps = 0/109 (0%) Query 12 GLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEISA 71 LVRPY+LTAGRT V+L L+A V + P ++ ++ I++LC SPSVAE++A Sbjct 14 SLVRPYSLTAGRTRPKVELALEALVASQPVALERQFELTNIETSIVELCRESPSVAEVAA 73 Query 72 RLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLK 120 RL +P+GVARVLV DL+ +G++RV ATL + S+ DER ELI R L GL+ Sbjct 74 RLGIPIGVARVLVADLIDAGHVRVSATLKEDSSDDERRELIERVLSGLR 122 >gi|229488636|ref|ZP_04382502.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229324140|gb|EEN89895.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=124 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 58/116 (50%), Positives = 74/116 (64%), Gaps = 0/116 (0%) Query 7 DRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSV 66 D + LVRPY LT GRT +DLPL+A + T+ + D+R I+ LC SV Sbjct 9 DDAEPSLVRPYALTEGRTLPSIDLPLEAIIATIEDVVSNNLAPQDIRASIVALCEQRISV 68 Query 67 AEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 AEI+A L +P+GV RVLV DLV +G L +HATL ++R ER ELI RTL GL+AL Sbjct 69 AEIAAHLGVPIGVVRVLVADLVVAGSLEIHATLRSDASRVERRELIERTLSGLRAL 124 >gi|226308033|ref|YP_002767993.1| hypothetical protein RER_45460 [Rhodococcus erythropolis PR4] gi|226187150|dbj|BAH35254.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=124 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 57/116 (50%), Positives = 74/116 (64%), Gaps = 0/116 (0%) Query 7 DRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSV 66 D + LVRPY LT GRT +DLPL+A + T+ + D+R I+ LC S+ Sbjct 9 DDAEPSLVRPYALTEGRTLPSIDLPLEAIIATIEDVVSNNLAPQDIRASIVALCEQRISI 68 Query 67 AEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 AEI+A L +P+GV RVLV DLV +G L +HATL ++R ER ELI RTL GL+AL Sbjct 69 AEIAAHLGVPIGVVRVLVADLVVAGSLEIHATLRSDASRVERRELIERTLSGLRAL 124 >gi|300789292|ref|YP_003769583.1| hypothetical protein AMED_7467 [Amycolatopsis mediterranei U32] gi|299798806|gb|ADJ49181.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340530937|gb|AEK46142.1| hypothetical protein RAM_38375 [Amycolatopsis mediterranei S699] Length=125 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 52/117 (45%), Positives = 74/117 (64%), Gaps = 0/117 (0%) Query 6 GDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPS 65 G R A L RPY TAGRT VDL ++A V+T G + + + QLC+ S Sbjct 9 GGRHAASLARPYAWTAGRTRPTVDLAVEALVETTAEGRTAPFSPTNPLAVVTQLCLHQRS 68 Query 66 VAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 VAE++A L +P+GVARVL+GDL+ +G + + TLT ++ DER++L+ R L GL+AL Sbjct 69 VAEVAAHLGVPLGVARVLIGDLLIAGQVSIRDTLTADASWDERNDLLERVLSGLRAL 125 >gi|54023643|ref|YP_117885.1| hypothetical protein nfa16750 [Nocardia farcinica IFM 10152] gi|54015151|dbj|BAD56521.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=122 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/110 (48%), Positives = 72/110 (66%), Gaps = 2/110 (1%) Query 13 LVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEISAR 72 L RPY +T GRT + VDLPL+A ++T G + RI+ LC SVAEI+A Sbjct 15 LARPYAVTRGRTESAVDLPLEAMIET--CRDVGFDAFHVAHARIVALCHTPLSVAEIAAE 72 Query 73 LDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 LDL +GVARVL+GDL+ G +R H T+T ++R++ L+ RTL+GL+AL Sbjct 73 LDLALGVARVLIGDLLVEGIVRRHQTITADASREQWMHLLERTLQGLRAL 122 >gi|300785210|ref|YP_003765501.1| hypothetical protein AMED_3310 [Amycolatopsis mediterranei U32] gi|299794724|gb|ADJ45099.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340526650|gb|AEK41855.1| hypothetical protein RAM_16835 [Amycolatopsis mediterranei S699] Length=126 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/120 (42%), Positives = 70/120 (59%), Gaps = 3/120 (2%) Query 6 GDRPK--AGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPA-GRWPAYDMRRRILQLCIG 62 GD P+ L RPY T GRT V++ ++A V+T G A + +L+LC+ Sbjct 7 GDEPRRSPALARPYAWTEGRTAPAVEIAVEALVETTADGRAEAVYQTSSALAEVLELCVR 66 Query 63 SPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 S+ EI+A L LP+GV RVLV DL+ + V TL+D +T DERH+L+ R L GL+ L Sbjct 67 PRSLMEIAALLALPLGVVRVLVSDLMQDYLVIVRDTLSDTATWDERHDLMERVLHGLRDL 126 >gi|302530577|ref|ZP_07282919.1| hypothetical protein SSMG_06959 [Streptomyces sp. AA4] gi|302439472|gb|EFL11288.1| hypothetical protein SSMG_06959 [Streptomyces sp. AA4] Length=332 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 51/112 (46%), Positives = 66/112 (59%), Gaps = 7/112 (6%) Query 14 VRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEISARL 73 VRPY T GRT +D +L L+A V T G R RRI LC+ + SVAEI+A L Sbjct 225 VRPYARTRGRTHSDHNLALEALVSTSDEGRRYRGVRSIEHRRICDLCLDTRSVAEIAAHL 284 Query 74 DLPVGVARVLVGDLVTSGYLRVHAT---LTDRSTRDERHELIGRTLRGLKAL 122 LP+GV +VLVGD+ G + +H T L DRS+R E + R L+GL+ L Sbjct 285 RLPLGVVKVLVGDMADIGLVMLHQTDLVLGDRSSR----EFMERVLQGLRNL 332 >gi|238061068|ref|ZP_04605777.1| hypothetical protein MCAG_02034 [Micromonospora sp. ATCC 39149] gi|237882879|gb|EEP71707.1| hypothetical protein MCAG_02034 [Micromonospora sp. ATCC 39149] Length=121 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/116 (42%), Positives = 69/116 (60%), Gaps = 4/116 (3%) Query 9 PKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPA-GRWPAYDMRRRILQLCIGSP-SV 66 P+ LVRPY +T GRT D+ L+A + P A R+ +D + RI +C G P S+ Sbjct 8 PRGALVRPYAVTRGRTEPRQDIALEAVLTASPTAVAESRFAGHD-KHRIATICEGRPQSL 66 Query 67 AEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 AE++A +P+GVARV+V D+V G L +H T +ER E++GR L GL+ L Sbjct 67 AEVAAYTRMPLGVARVIVADMVAEGLLTLH-TAAPAEGYEERMEILGRVLSGLRRL 121 >gi|300790333|ref|YP_003770624.1| hypothetical protein AMED_8527 [Amycolatopsis mediterranei U32] gi|299799847|gb|ADJ50222.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340532015|gb|AEK47220.1| hypothetical protein RAM_43765 [Amycolatopsis mediterranei S699] Length=493 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/112 (48%), Positives = 67/112 (60%), Gaps = 7/112 (6%) Query 14 VRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEISARL 73 VRPYT T GRT +D +L L+A V T G R RRI LC+ + SVAEI+A L Sbjct 386 VRPYTRTGGRTRSDHNLALEALVSTSDDGRRYRGVRSVEHRRICDLCLDTRSVAEIAAHL 445 Query 74 DLPVGVARVLVGDLVTSGYLRVHAT---LTDRSTRDERHELIGRTLRGLKAL 122 LP+GV +VLVGD+ G + +H T L DRS+R E + R L GL+AL Sbjct 446 RLPLGVVKVLVGDMADIGLVLIHQTELILGDRSSR----EFMERVLAGLRAL 493 >gi|291302719|ref|YP_003513997.1| hypothetical protein Snas_5270 [Stackebrandtia nassauensis DSM 44728] gi|290571939|gb|ADD44904.1| protein of unknown function DUF742 [Stackebrandtia nassauensis DSM 44728] Length=126 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 47/113 (42%), Positives = 69/113 (62%), Gaps = 3/113 (2%) Query 13 LVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLC-IGSPSVAEISA 71 LVRPY +T GRT +D+ ++A V+T G +G + A ++ I LC +G S+AEI+A Sbjct 14 LVRPYAVTRGRTRPRLDIAMEALVETTARGRSGGFLAGQEQQTIAGLCGVGLQSMAEIAA 73 Query 72 RLDLPVGVARVLVGDLVTSGYLRVH--ATLTDRSTRDERHELIGRTLRGLKAL 122 R+ +P+GVARVLV D+ G L VH A +++ EL+ R L GL+ L Sbjct 74 RMQMPLGVARVLVADMAADGLLAVHEPAGISESGEDAVGTELLERVLSGLRRL 126 >gi|302554374|ref|ZP_07306716.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302471992|gb|EFL35085.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length=131 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 48/121 (40%), Positives = 66/121 (55%), Gaps = 4/121 (3%) Query 2 FNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCI 61 + GD+P LVRPY +T GRT L ++A + T A PA +RI LC Sbjct 15 YEDEGDQP---LVRPYAMTGGRTRPRYQLAIEALISTT-ADPAALMALLPEHQRICHLCR 70 Query 62 GSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKA 121 SVAE+SA L++P+GVAR+LV DL +G + +H D +T L+ R L GL+ Sbjct 71 EVKSVAEVSALLNMPLGVARILVADLAEAGLVAIHQPGGDEATGAPDVTLLERVLSGLRK 130 Query 122 L 122 L Sbjct 131 L 131 >gi|302558194|ref|ZP_07310536.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302475812|gb|EFL38905.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length=131 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 50/123 (41%), Positives = 68/123 (56%), Gaps = 8/123 (6%) Query 2 FNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTL--PAGPAGRWPAYDMRRRILQL 59 + GD+P LVRPY +T GRT L ++A + T PA G P + +RI L Sbjct 15 YEDEGDQP---LVRPYAMTGGRTRPRYQLAIEALISTTADPAALMGLLPEH---QRICHL 68 Query 60 CIGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGL 119 C SVAE+SA L++P+GVAR+LV DL +G + VH D +T L+ R L GL Sbjct 69 CREVKSVAEVSALLNMPLGVARILVADLAEAGLVAVHQPGGDETTGAPDVTLLERVLSGL 128 Query 120 KAL 122 + L Sbjct 129 RKL 131 >gi|291437060|ref|ZP_06576450.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291339955|gb|EFE66911.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length=131 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/123 (41%), Positives = 68/123 (56%), Gaps = 8/123 (6%) Query 2 FNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTL--PAGPAGRWPAYDMRRRILQL 59 + GD+P LVRPY +T GRT L ++A V T PA G P + +RI L Sbjct 15 YEDEGDQP---LVRPYAMTGGRTRPRYQLAIEALVSTTADPAALMGLLPEH---QRICHL 68 Query 60 CIGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGL 119 C SVAE+SA L++P+GVAR+LV DL +G + +H D +T L+ R L GL Sbjct 69 CREVKSVAEVSALLNMPLGVARILVADLAEAGLVAIHQPGGDETTGAPDVTLLERVLSGL 128 Query 120 KAL 122 + L Sbjct 129 RNL 131 >gi|330470118|ref|YP_004407861.1| hypothetical protein VAB18032_00885 [Verrucosispora maris AB-18-032] gi|328813089|gb|AEB47261.1| hypothetical protein VAB18032_00885 [Verrucosispora maris AB-18-032] Length=120 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/116 (44%), Positives = 69/116 (60%), Gaps = 4/116 (3%) Query 9 PKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPA-GRWPAYDMRRRILQLCIGSP-SV 66 P+ LVRPY +T GRT D+ L+A + P A R+ +D + RI +C G P S+ Sbjct 7 PRGALVRPYAVTRGRTEPLQDIALEAVLIASPTQIAESRFAGHD-KHRIAMVCEGRPESL 65 Query 67 AEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 AEI+A LP+GVARVLV D+V G L + T + +ER E++GR L GL+ L Sbjct 66 AEIAAYTRLPLGVARVLVADMVADGLLTLQ-TAAPATGFEERMEMLGRVLSGLREL 120 >gi|226361166|ref|YP_002778944.1| hypothetical protein ROP_17520 [Rhodococcus opacus B4] gi|226239651|dbj|BAH49999.1| hypothetical protein [Rhodococcus opacus B4] Length=188 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 51/112 (46%), Positives = 67/112 (60%), Gaps = 5/112 (4%) Query 13 LVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPA--GRWPAYDMRRRILQLCIGSPSVAEIS 70 +VRP+ LT GRT + VDLPL+A + G A PA D RR+ LC SVAEI+ Sbjct 80 IVRPFILTGGRTESGVDLPLEAVIVARADGDAVVDAMPAPDEPRRVFALCSEPRSVAEIA 139 Query 71 ARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 + +P+GVARVLVGDL +G + V+ T ST +R L+ R L GL+ L Sbjct 140 SLASIPLGVARVLVGDLAAAGAVTVNETAG--STGPDRK-LMERVLDGLRKL 188 >gi|238062616|ref|ZP_04607325.1| hypothetical protein MCAG_03582 [Micromonospora sp. ATCC 39149] gi|237884427|gb|EEP73255.1| hypothetical protein MCAG_03582 [Micromonospora sp. ATCC 39149] Length=124 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/126 (43%), Positives = 69/126 (55%), Gaps = 15/126 (11%) Query 7 DRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPA--------GRWPAYDMRRRILQ 58 D P LVRPY +T GRT +D+ L+A V+T G A GR Y I Sbjct 4 DEPTGALVRPYAVTRGRTRPRLDIALEALVETTVRGRAAASSNGGQGREHQY-----IAA 58 Query 59 LCIGS-PSVAEISARLDLPVGVARVLVGDLVTSGYLRVHA-TLTDRSTRDERHELIGRTL 116 LC G S+AEI+AR+ LP+GVARVL+ D+ T G + VH T+ D S EL+ R L Sbjct 59 LCDGRVQSLAEIAARMQLPLGVARVLIADMATDGLVAVHEPTILDDSDDAVGTELLERVL 118 Query 117 RGLKAL 122 GL+ L Sbjct 119 SGLRRL 124 >gi|330465708|ref|YP_004403451.1| hypothetical protein VAB18032_08665 [Verrucosispora maris AB-18-032] gi|328808679|gb|AEB42851.1| hypothetical protein VAB18032_08665 [Verrucosispora maris AB-18-032] Length=124 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/126 (43%), Positives = 69/126 (55%), Gaps = 15/126 (11%) Query 7 DRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPA--------GRWPAYDMRRRILQ 58 D P LVRPY +T GRT +D+ L+A V+T G A GR Y I Sbjct 4 DEPTGALVRPYAVTRGRTRPRLDIALEALVETTVRGRAVATGNGGQGREHQY-----IAA 58 Query 59 LCIGS-PSVAEISARLDLPVGVARVLVGDLVTSGYLRVHA-TLTDRSTRDERHELIGRTL 116 LC G S+AEI+AR+ LP+GVARVL+ D+ T G + VH T+ D S EL+ R L Sbjct 59 LCDGRVQSLAEIAARMQLPLGVARVLIADMATDGLVAVHEPTILDDSDDAVGTELLERVL 118 Query 117 RGLKAL 122 GL+ L Sbjct 119 SGLRRL 124 >gi|302865293|ref|YP_003833930.1| hypothetical protein Micau_0790 [Micromonospora aurantiaca ATCC 27029] gi|302568152|gb|ADL44354.1| protein of unknown function DUF742 [Micromonospora aurantiaca ATCC 27029] Length=126 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/127 (43%), Positives = 69/127 (55%), Gaps = 16/127 (12%) Query 7 DRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPA---------GRWPAYDMRRRIL 57 D P LVRPY +T GRT +D+ L+A V+T G A GR Y I Sbjct 5 DEPTGALVRPYAVTRGRTRPRLDIALEALVETTVRGRAVATGNGGGHGREHQY-----IA 59 Query 58 QLCIGS-PSVAEISARLDLPVGVARVLVGDLVTSGYLRVHA-TLTDRSTRDERHELIGRT 115 LC G S+AEI+AR+ LP+GVARVL+ D+ T G + VH T+ D S EL+ R Sbjct 60 ALCDGRVQSLAEIAARMQLPLGVARVLIADMATDGLVAVHEPTILDDSEDAVGTELLERV 119 Query 116 LRGLKAL 122 L GL+ L Sbjct 120 LSGLRRL 126 >gi|315501837|ref|YP_004080724.1| hypothetical protein ML5_1033 [Micromonospora sp. L5] gi|315408456|gb|ADU06573.1| protein of unknown function DUF742 [Micromonospora sp. L5] Length=126 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/127 (43%), Positives = 69/127 (55%), Gaps = 16/127 (12%) Query 7 DRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPA---------GRWPAYDMRRRIL 57 D P LVRPY +T GRT +D+ L+A V+T G A GR Y I Sbjct 5 DEPTGALVRPYAVTRGRTRPRLDIALEALVETTVRGRAVATGNGGGHGREHQY-----IA 59 Query 58 QLCIGS-PSVAEISARLDLPVGVARVLVGDLVTSGYLRVHA-TLTDRSTRDERHELIGRT 115 LC G S+AEI+AR+ LP+GVARVL+ D+ T G + VH T+ D S EL+ R Sbjct 60 ALCDGRVQSLAEIAARMQLPLGVARVLIADMATDGLVAVHEPTILDDSDDAVGTELLERV 119 Query 116 LRGLKAL 122 L GL+ L Sbjct 120 LSGLRRL 126 >gi|145593376|ref|YP_001157673.1| hypothetical protein Strop_0818 [Salinispora tropica CNB-440] gi|145302713|gb|ABP53295.1| protein of unknown function DUF742 [Salinispora tropica CNB-440] Length=125 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/126 (43%), Positives = 69/126 (55%), Gaps = 15/126 (11%) Query 7 DRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPA--------GRWPAYDMRRRILQ 58 D P LVRPY +T GRT +D+ L+A ++T G A GR Y I Sbjct 5 DEPTGALVRPYAVTRGRTRPRLDIALEALIETTVRGRAVATGNGGHGREHQY-----IAA 59 Query 59 LCIGS-PSVAEISARLDLPVGVARVLVGDLVTSGYLRVHA-TLTDRSTRDERHELIGRTL 116 LC G S+AEI+AR+ LP+GVARVL+ D+ T G + VH T+ D S EL+ R L Sbjct 60 LCDGRVQSLAEIAARMQLPLGVARVLIADMATDGLVAVHEPTILDDSDDVVGTELLERVL 119 Query 117 RGLKAL 122 GL+ L Sbjct 120 SGLRRL 125 >gi|254392490|ref|ZP_05007670.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|197706157|gb|EDY51969.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length=134 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/124 (40%), Positives = 70/124 (57%), Gaps = 9/124 (7%) Query 2 FNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTL--PAGPAGRWPAYDMRRRILQL 59 + GD+P LVRPY +T GRT L ++A V T P+ G+ P + +RI +L Sbjct 17 YGFEGDQP---LVRPYAMTGGRTRPRYQLAIEALVSTTADPSSLHGQLPEH---QRICRL 70 Query 60 CIGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERH-ELIGRTLRG 118 CI SVAE+SA L +P+GVAR+LV DL +G + +H D + + L+ R L G Sbjct 71 CIEIKSVAEVSALLSMPLGVARILVADLAEAGMVAIHQPGGDEAAGGQPDVTLLERVLSG 130 Query 119 LKAL 122 L+ L Sbjct 131 LRKL 134 >gi|159036419|ref|YP_001535672.1| hypothetical protein Sare_0762 [Salinispora arenicola CNS-205] gi|157915254|gb|ABV96681.1| protein of unknown function DUF742 [Salinispora arenicola CNS-205] Length=125 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/126 (41%), Positives = 68/126 (54%), Gaps = 15/126 (11%) Query 7 DRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLP--------AGPAGRWPAYDMRRRILQ 58 D P LVRPY +T GRT +D+ ++A ++T G GR Y I Sbjct 5 DEPTGALVRPYAVTRGRTRPRLDIAMEALIETTVRGRVVANGNGGHGREHQY-----IAA 59 Query 59 LCIGS-PSVAEISARLDLPVGVARVLVGDLVTSGYLRVHA-TLTDRSTRDERHELIGRTL 116 LC G S+AEI+AR+ LP+GVARVL+ D+ T G + VH T+ D S EL+ R L Sbjct 60 LCDGRVQSLAEIAARMQLPLGVARVLIADMATDGLVAVHEPTILDDSDDAVGTELLERVL 119 Query 117 RGLKAL 122 GL+ L Sbjct 120 SGLRRL 125 >gi|257057804|ref|YP_003135636.1| hypothetical protein Svir_38650 [Saccharomonospora viridis DSM 43017] gi|256587676|gb|ACU98809.1| Protein of unknown function (DUF742) [Saccharomonospora viridis DSM 43017] Length=162 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/113 (40%), Positives = 65/113 (58%), Gaps = 12/113 (10%) Query 15 RPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRW-----PAYDMRRRILQLCIGSPSVAEI 69 RPY +T GRT DL ++ V A P +W P Y R++ Q+C SVAE+ Sbjct 57 RPYVMTKGRTHARPDLAIETLVS---ATPHAQWHLHKNPEY---RKVGQVCAQPRSVAEV 110 Query 70 SARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 +A L +P+GVARVL+ DL +G++R+HA R +R +L+ R L GL+ L Sbjct 111 AALLAVPLGVARVLISDLADTGFVRIHAAPQSTDGRPDR-QLMHRVLAGLQRL 162 >gi|297191849|ref|ZP_06909247.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197722043|gb|EDY65951.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length=134 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/123 (41%), Positives = 66/123 (54%), Gaps = 8/123 (6%) Query 2 FNPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTL--PAGPAGRWPAYDMRRRILQL 59 + GD+P LVRPY +T GRT L ++A V T PA AG P + +RI L Sbjct 18 YGDEGDQP---LVRPYAMTGGRTRPRYQLAIEALVSTTADPALLAGLLPEH---QRICHL 71 Query 60 CIGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGL 119 C SVAEISA L +P+GVAR+LV DL +G + +H + L+ R L GL Sbjct 72 CREVKSVAEISALLSMPLGVARILVADLAEAGMVAIHQPGNGEAGGTPDVTLLERVLSGL 131 Query 120 KAL 122 + L Sbjct 132 RKL 134 >gi|134097170|ref|YP_001102831.1| hypothetical protein SACE_0559 [Saccharopolyspora erythraea NRRL 2338] gi|291005373|ref|ZP_06563346.1| hypothetical protein SeryN2_12707 [Saccharopolyspora erythraea NRRL 2338] gi|133909793|emb|CAL99905.1| hypothetical protein SACE_0559 [Saccharopolyspora erythraea NRRL 2338] Length=267 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/116 (42%), Positives = 66/116 (57%), Gaps = 13/116 (11%) Query 13 LVRPYTLTAGRTGTDVDLPLQAPVQTLPAG---PAGRWPAYDMRRRILQLCIGSPSVAEI 69 LVRPY T GRT TD DL ++ V T G PA P + R I +LC+ + SVAE+ Sbjct 159 LVRPYARTRGRTRTDYDLAIETLVSTSERGRAQPAASSPEH---RSISELCMEARSVAEV 215 Query 70 SARLDLPVGVARVLVGDLVTSGYLRVHAT---LTDRSTRDERHELIGRTLRGLKAL 122 +A L LP+GV RVL+GD+ G + +H + + DR + E + R L GL+ L Sbjct 216 AAHLRLPLGVVRVLIGDMAGLGLVLIHESGMVVGDRPS----MEFLERVLSGLRRL 267 >gi|340529324|gb|AEK44529.1| hypothetical protein RAM_30270 [Amycolatopsis mediterranei S699] Length=123 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/116 (44%), Positives = 60/116 (52%), Gaps = 1/116 (0%) Query 7 DRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSV 66 D AGLVRPY T GRT DLP++ V T G A + I LC S SV Sbjct 9 DGGAAGLVRPYFRTHGRTRPTRDLPVETLVSTTARGRAMTRGSTQEESEICVLCRTSQSV 68 Query 67 AEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHELIGRTLRGLKAL 122 AE++AR LP+GVARVL+ DL G + VH T R +L+ R L GL L Sbjct 69 AEVAARRRLPLGVARVLLSDLADRGLVAVHTTKRGNGNRPS-MDLMKRILHGLSRL 123 >gi|295836344|ref|ZP_06823277.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|197699350|gb|EDY46283.1| conserved hypothetical protein [Streptomyces sp. SPB74] Length=130 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/121 (41%), Positives = 67/121 (56%), Gaps = 6/121 (4%) Query 5 AGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTL--PAGPAGRWPAYDMRRRILQLCIG 62 A DR + LVRPY +T GRT L ++A V T P+ G+ P + +RI LC Sbjct 13 AADRGPSPLVRPYAMTGGRTRPRYQLAIEALVSTTAQPSQMQGQLPEH---QRICNLCRE 69 Query 63 SPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERH-ELIGRTLRGLKA 121 SVAEISA L +P+GVAR+LV DL +G + +H D + + L+ R L GL+ Sbjct 70 IKSVAEISALLSIPLGVARILVADLAEAGLVAIHQPGGDENAGGQPDVTLLERVLSGLRK 129 Query 122 L 122 L Sbjct 130 L 130 >gi|297191853|ref|ZP_06909251.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197722047|gb|EDY65955.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length=200 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/123 (41%), Positives = 68/123 (56%), Gaps = 6/123 (4%) Query 3 NPAGDRPKAGLVRPYTLTAGRTGTDVDLPLQAPVQTL--PAGPAGRWPAYDMRRRILQLC 60 +PAG LVRPY +T GRT L ++A V T P+ G+ P + +RI +LC Sbjct 81 SPAGSGRHNPLVRPYAMTGGRTRPRYQLAIEALVSTTADPSRLQGQLPEH---QRICRLC 137 Query 61 IGSPSVAEISARLDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERH-ELIGRTLRGL 119 SVAEISA L +P+GVAR+LV DL +G + +H D S + L+ R L GL Sbjct 138 FEIKSVAEISALLSIPLGVARILVADLAEAGLVAIHQPGGDESAGGQPDVTLLERVLSGL 197 Query 120 KAL 122 + L Sbjct 198 RKL 200 >gi|288919724|ref|ZP_06414051.1| protein of unknown function DUF742 [Frankia sp. EUN1f] gi|288348913|gb|EFC83163.1| protein of unknown function DUF742 [Frankia sp. EUN1f] Length=119 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/112 (41%), Positives = 65/112 (59%), Gaps = 6/112 (5%) Query 13 LVRPYTLTAGRTGTDVDLPLQAPVQTLPAGPAGRWPAYDMRRRILQLCIGSPSVAEISAR 72 +VRPY +T GRT + +L ++A V T P G ++ I +C S+AEI+A Sbjct 12 VVRPYAMTGGRTRSRYELAIEALVFTTPLGEERALSLNLEQQTIAAMCRQVRSIAEIAAG 71 Query 73 LDLPVGVARVLVGDLVTSGYLRVHATLTDRSTRDERHE--LIGRTLRGLKAL 122 L +P+GVARVLVGD+ G++RVH + RDE + L+ R L GL+ L Sbjct 72 LRVPLGVARVLVGDMADEGFVRVH----QQPDRDEAPDLALLERVLSGLRKL 119 Lambda K H 0.321 0.140 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 127525862838 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40