BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3364c
Length=130
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610500|ref|NP_217881.1| hypothetical protein Rv3364c [Mycob... 256 6e-67
gi|121639291|ref|YP_979515.1| hypothetical protein BCG_3436c [My... 253 8e-66
gi|339296190|gb|AEJ48301.1| hypothetical protein CCDC5079_3112 [... 247 4e-64
gi|118618274|ref|YP_906606.1| hypothetical protein MUL_2849 [Myc... 226 8e-58
gi|240169064|ref|ZP_04747723.1| hypothetical protein MkanA1_0710... 224 4e-57
gi|118465715|ref|YP_883466.1| roadblock/LC7 domain-contain prote... 223 1e-56
gi|254822560|ref|ZP_05227561.1| roadblock/LC7 domain-contain pro... 220 4e-56
gi|342861577|ref|ZP_08718224.1| roadblock/LC7 domain-containing ... 220 4e-56
gi|296168825|ref|ZP_06850501.1| roadblock/LC7 domain protein [My... 219 8e-56
gi|41409569|ref|NP_962405.1| hypothetical protein MAP3471c [Myco... 213 8e-54
gi|333991839|ref|YP_004524453.1| hypothetical protein JDM601_319... 202 9e-51
gi|120402545|ref|YP_952374.1| roadblock/LC7 family protein [Myco... 199 8e-50
gi|108798161|ref|YP_638358.1| roadblock/LC7 domain-contain prote... 195 2e-48
gi|118471090|ref|YP_886015.1| roadblock/LC7 domain-contain prote... 194 4e-48
gi|145225464|ref|YP_001136142.1| roadblock/LC7 family protein [M... 182 2e-44
gi|111020665|ref|YP_703637.1| hypothetical protein RHA1_ro03676 ... 174 3e-42
gi|226308032|ref|YP_002767992.1| hypothetical protein RER_45450 ... 174 3e-42
gi|54022635|ref|YP_116877.1| hypothetical protein nfa6680 [Nocar... 170 5e-41
gi|226364835|ref|YP_002782617.1| hypothetical protein ROP_54250 ... 169 1e-40
gi|54026940|ref|YP_121182.1| hypothetical protein nfa49660 [Noca... 168 2e-40
gi|84494307|ref|ZP_00993426.1| hypothetical protein JNB_05914 [J... 160 6e-38
gi|340530938|gb|AEK46143.1| roadblock/LC7 family protein [Amycol... 158 3e-37
gi|300789293|ref|YP_003769584.1| roadblock/LC7 family protein [A... 157 4e-37
gi|300785209|ref|YP_003765500.1| roadblock/LC7 family protein [A... 152 1e-35
gi|340526649|gb|AEK41854.1| two-component system histidine kinas... 151 3e-35
gi|291302720|ref|YP_003513998.1| Roadblock/LC7 family protein [S... 151 3e-35
gi|238062615|ref|ZP_04607324.1| roadblock family protein [Microm... 151 4e-35
gi|330465707|ref|YP_004403450.1| roadblock/lc7 family protein [V... 150 4e-35
gi|302865292|ref|YP_003833929.1| roadblock/LC7 family protein [M... 150 4e-35
gi|145593375|ref|YP_001157672.1| roadblock/LC7 family protein [S... 148 3e-34
gi|159036418|ref|YP_001535671.1| roadblock/LC7 family protein [S... 147 4e-34
gi|256396963|ref|YP_003118527.1| Roadblock/LC7 family protein [C... 146 1e-33
gi|254392489|ref|ZP_05007669.1| conserved hypothetical protein [... 145 3e-33
gi|328885284|emb|CCA58523.1| hypothetical protein SVEN_5237 [Str... 145 3e-33
gi|297156932|gb|ADI06644.1| hypothetical protein SBI_03523 [Stre... 144 4e-33
gi|21223898|ref|NP_629677.1| hypothetical protein SCO5543 [Strep... 144 5e-33
gi|325001156|ref|ZP_08122268.1| roadblock/LC7 family protein [Ps... 144 5e-33
gi|72161345|ref|YP_289002.1| hypothetical protein Tfu_0941 [Ther... 144 6e-33
gi|329936805|ref|ZP_08286484.1| hypothetical protein SGM_1976 [S... 143 6e-33
gi|291437059|ref|ZP_06576449.1| conserved hypothetical protein [... 143 6e-33
gi|297202592|ref|ZP_06919989.1| roadblock/LC7 family protein [St... 143 7e-33
gi|302522106|ref|ZP_07274448.1| conserved hypothetical protein [... 143 8e-33
gi|331699466|ref|YP_004335705.1| Roadblock/LC7 family protein [P... 143 8e-33
gi|290957151|ref|YP_003488333.1| hypothetical protein SCAB_26701... 143 8e-33
gi|159039784|ref|YP_001539037.1| roadblock/LC7 family protein [S... 143 9e-33
gi|295836339|ref|ZP_06823272.1| roadblock/LC7 domain-containing ... 143 9e-33
gi|345009557|ref|YP_004811911.1| Roadblock/LC7 family protein [S... 143 1e-32
gi|297191848|ref|ZP_06909246.1| roadblock/LC7 family protein [St... 143 1e-32
gi|29829237|ref|NP_823871.1| hypothetical protein SAV_2695 [Stre... 142 1e-32
gi|145596385|ref|YP_001160682.1| roadblock/LC7 family protein [S... 142 1e-32
>gi|15610500|ref|NP_217881.1| hypothetical protein Rv3364c [Mycobacterium tuberculosis H37Rv]
gi|15842960|ref|NP_337997.1| hypothetical protein MT3472 [Mycobacterium tuberculosis CDC1551]
gi|31794547|ref|NP_857040.1| hypothetical protein Mb3399c [Mycobacterium bovis AF2122/97]
75 more sequence titles
Length=130
Score = 256 bits (655), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%)
Query 1 MKARLPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLAS 60
MKARLPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLAS
Sbjct 1 MKARLPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLAS 60
Query 61 LAGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVER 120
LAGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVER
Sbjct 61 LAGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVER 120
Query 121 VGGVVQSCRR 130
VGGVVQSCRR
Sbjct 121 VGGVVQSCRR 130
>gi|121639291|ref|YP_979515.1| hypothetical protein BCG_3436c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224991788|ref|YP_002646477.1| hypothetical protein JTY_3436 [Mycobacterium bovis BCG str. Tokyo
172]
gi|121494939|emb|CAL73425.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224774903|dbj|BAH27709.1| hypothetical protein JTY_3436 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341603316|emb|CCC65997.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=130
Score = 253 bits (645), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 129/130 (99%), Positives = 129/130 (99%), Gaps = 0/130 (0%)
Query 1 MKARLPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLAS 60
MKARLPDSPLDWLVSKFAREV GVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLAS
Sbjct 1 MKARLPDSPLDWLVSKFAREVLGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLAS 60
Query 61 LAGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVER 120
LAGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVER
Sbjct 61 LAGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVER 120
Query 121 VGGVVQSCRR 130
VGGVVQSCRR
Sbjct 121 VGGVVQSCRR 130
>gi|339296190|gb|AEJ48301.1| hypothetical protein CCDC5079_3112 [Mycobacterium tuberculosis
CCDC5079]
gi|339299793|gb|AEJ51903.1| hypothetical protein CCDC5180_3066 [Mycobacterium tuberculosis
CCDC5180]
Length=126
Score = 247 bits (631), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/126 (99%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 5 LPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGG 64
+PDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGG
Sbjct 1 MPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGG 60
Query 65 AAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGV 124
AAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGV
Sbjct 61 AAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGV 120
Query 125 VQSCRR 130
VQSCRR
Sbjct 121 VQSCRR 126
>gi|118618274|ref|YP_906606.1| hypothetical protein MUL_2849 [Mycobacterium ulcerans Agy99]
gi|183981188|ref|YP_001849479.1| hypothetical protein MMAR_1166 [Mycobacterium marinum M]
gi|118570384|gb|ABL05135.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
gi|183174514|gb|ACC39624.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=143
Score = 226 bits (576), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 114/130 (88%), Positives = 120/130 (93%), Gaps = 0/130 (0%)
Query 1 MKARLPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLAS 60
M RL DSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASE+LPRERADQLAAV SGL+S
Sbjct 1 MNTRLSDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEYLPRERADQLAAVASGLSS 60
Query 61 LAGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVER 120
LA GAAQLF+GGQVLQSVVEMQNG+LLLM+VGDGS LAALA TGCDIGQIGYEMA+L ER
Sbjct 61 LASGAAQLFEGGQVLQSVVEMQNGFLLLMRVGDGSHLAALAVTGCDIGQIGYEMALLAER 120
Query 121 VGGVVQSCRR 130
VG VVQS RR
Sbjct 121 VGSVVQSSRR 130
>gi|240169064|ref|ZP_04747723.1| hypothetical protein MkanA1_07109 [Mycobacterium kansasii ATCC
12478]
Length=143
Score = 224 bits (570), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/130 (88%), Positives = 119/130 (92%), Gaps = 0/130 (0%)
Query 1 MKARLPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLAS 60
M R DSPLDWLVSKFAREVPGVAHALLVSVDGLP+AASE+LPRERADQLAAV SGLAS
Sbjct 1 MNTRSLDSPLDWLVSKFAREVPGVAHALLVSVDGLPLAASEYLPRERADQLAAVASGLAS 60
Query 61 LAGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVER 120
LA GAAQLF+GGQVLQSVVEMQNG+LLLM+VGDGS LA LA TGCDIGQIGYEMAILVER
Sbjct 61 LATGAAQLFEGGQVLQSVVEMQNGFLLLMRVGDGSHLATLAVTGCDIGQIGYEMAILVER 120
Query 121 VGGVVQSCRR 130
VG VVQS RR
Sbjct 121 VGSVVQSSRR 130
>gi|118465715|ref|YP_883466.1| roadblock/LC7 domain-contain protein [Mycobacterium avium 104]
gi|254776758|ref|ZP_05218274.1| roadblock/LC7 domain-contain protein [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118167002|gb|ABK67899.1| roadblock/LC7 domain family protein [Mycobacterium avium 104]
Length=140
Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/125 (90%), Positives = 115/125 (92%), Gaps = 0/125 (0%)
Query 6 PDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGA 65
PD LDWLV+KFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAV SGLASLA GA
Sbjct 12 PDRSLDWLVTKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVASGLASLATGA 71
Query 66 AQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVV 125
AQLF+GGQVLQSVVEM NGYLLLMQVGDGS LA LAA CDIGQIGYEMA+LVERVGGVV
Sbjct 72 AQLFEGGQVLQSVVEMSNGYLLLMQVGDGSHLATLAAASCDIGQIGYEMAVLVERVGGVV 131
Query 126 QSCRR 130
QS RR
Sbjct 132 QSTRR 136
>gi|254822560|ref|ZP_05227561.1| roadblock/LC7 domain-contain protein [Mycobacterium intracellulare
ATCC 13950]
Length=133
Score = 220 bits (561), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/125 (88%), Positives = 116/125 (93%), Gaps = 0/125 (0%)
Query 6 PDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGA 65
PD+ LDWLV++FAREVPGVAHALLVSVDGLP+AASEHLPRERADQLAAV SGLASLA GA
Sbjct 4 PDNSLDWLVTRFAREVPGVAHALLVSVDGLPIAASEHLPRERADQLAAVASGLASLATGA 63
Query 66 AQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVV 125
AQLF+GGQVLQSVVEM NGYLLLM+VGDGS LA LA T CDIGQIGYEMA+LVERVGGVV
Sbjct 64 AQLFEGGQVLQSVVEMANGYLLLMRVGDGSHLATLAVTSCDIGQIGYEMAVLVERVGGVV 123
Query 126 QSCRR 130
QS RR
Sbjct 124 QSTRR 128
>gi|342861577|ref|ZP_08718224.1| roadblock/LC7 domain-containing protein [Mycobacterium colombiense
CECT 3035]
gi|342131066|gb|EGT84355.1| roadblock/LC7 domain-containing protein [Mycobacterium colombiense
CECT 3035]
Length=135
Score = 220 bits (561), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/125 (88%), Positives = 116/125 (93%), Gaps = 0/125 (0%)
Query 6 PDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGA 65
PD+ LDWLV++FAREVPGVAHALLVSVDGLP+AASEHLPRERADQLAAV SGLASLA GA
Sbjct 4 PDNSLDWLVTRFAREVPGVAHALLVSVDGLPIAASEHLPRERADQLAAVASGLASLATGA 63
Query 66 AQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVV 125
AQLF+GGQVLQSVVEMQNGYLLLM+VGDGS LA LA CDIGQIGYEMA+LVERVGGVV
Sbjct 64 AQLFEGGQVLQSVVEMQNGYLLLMRVGDGSHLATLAGASCDIGQIGYEMAVLVERVGGVV 123
Query 126 QSCRR 130
QS RR
Sbjct 124 QSTRR 128
>gi|296168825|ref|ZP_06850501.1| roadblock/LC7 domain protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896500|gb|EFG76148.1| roadblock/LC7 domain protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=140
Score = 219 bits (559), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 110/121 (91%), Positives = 115/121 (96%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
LDWLV++FAREVPGVAHALLVSVDGLP+AASEHLPRERADQLAAV SGLASLA GAAQLF
Sbjct 16 LDWLVTRFAREVPGVAHALLVSVDGLPIAASEHLPRERADQLAAVASGLASLATGAAQLF 75
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GGQVLQSVVEMQNGYLLLM+VGDGS LA LAAT CDIGQIGYEMAILVERVGGVVQS R
Sbjct 76 EGGQVLQSVVEMQNGYLLLMRVGDGSHLATLAATSCDIGQIGYEMAILVERVGGVVQSTR 135
Query 130 R 130
R
Sbjct 136 R 136
>gi|41409569|ref|NP_962405.1| hypothetical protein MAP3471c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398400|gb|AAS06021.1| hypothetical protein MAP_3471c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459775|gb|EGO38690.1| hypothetical protein MAPs_00180 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=140
Score = 213 bits (542), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/125 (91%), Positives = 116/125 (93%), Gaps = 0/125 (0%)
Query 6 PDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGA 65
PD LDWLV+KFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAV SGLASLA GA
Sbjct 12 PDRSLDWLVTKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVASGLASLATGA 71
Query 66 AQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVV 125
AQLF+GGQVLQSVVEM NGYLLLMQVGDGS LAALAA CDIGQIGYEMA+LVERVGGVV
Sbjct 72 AQLFEGGQVLQSVVEMSNGYLLLMQVGDGSHLAALAAASCDIGQIGYEMAVLVERVGGVV 131
Query 126 QSCRR 130
QS RR
Sbjct 132 QSTRR 136
>gi|333991839|ref|YP_004524453.1| hypothetical protein JDM601_3199 [Mycobacterium sp. JDM601]
gi|333487807|gb|AEF37199.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=148
Score = 202 bits (515), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 100/127 (79%), Positives = 114/127 (90%), Gaps = 0/127 (0%)
Query 4 RLPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAG 63
R P+ LDWLV+ FAR+VPGV+HA+LVSVDGL VAASEHLP+ERADQLAAV SGLASLA
Sbjct 12 RAPEGSLDWLVTNFARDVPGVSHAVLVSVDGLTVAASEHLPKERADQLAAVASGLASLAT 71
Query 64 GAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGG 123
GAAQLF+GG+VLQSVVEM++GYLLLM+VGDGS LA LA+ CDIGQ+GYEMA+LVERVG
Sbjct 72 GAAQLFEGGRVLQSVVEMEHGYLLLMRVGDGSHLATLASASCDIGQVGYEMAVLVERVGA 131
Query 124 VVQSCRR 130
VVQS RR
Sbjct 132 VVQSARR 138
>gi|120402545|ref|YP_952374.1| roadblock/LC7 family protein [Mycobacterium vanbaalenii PYR-1]
gi|119955363|gb|ABM12368.1| Roadblock/LC7 family protein [Mycobacterium vanbaalenii PYR-1]
Length=129
Score = 199 bits (507), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 101/123 (83%), Positives = 110/123 (90%), Gaps = 0/123 (0%)
Query 8 SPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQ 67
S LDWLV++FAREVPGV+HA+LVS DGL +AASEH+P ERADQLAAV SGLASL+ GAAQ
Sbjct 2 SSLDWLVARFAREVPGVSHAILVSADGLLMAASEHIPGERADQLAAVASGLASLSTGAAQ 61
Query 68 LFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQS 127
LFDGG VLQSVVEM+NGYLLLM+VGDGS LA LA GCDIGQIGYEMAILVERVG VVQS
Sbjct 62 LFDGGHVLQSVVEMENGYLLLMRVGDGSNLATLATRGCDIGQIGYEMAILVERVGAVVQS 121
Query 128 CRR 130
RR
Sbjct 122 PRR 124
>gi|108798161|ref|YP_638358.1| roadblock/LC7 domain-contain protein [Mycobacterium sp. MCS]
gi|119867257|ref|YP_937209.1| roadblock/LC7 family protein [Mycobacterium sp. KMS]
gi|126433820|ref|YP_001069511.1| roadblock/LC7 family protein [Mycobacterium sp. JLS]
gi|108768580|gb|ABG07302.1| Roadblock/LC7 [Mycobacterium sp. MCS]
gi|119693346|gb|ABL90419.1| Roadblock/LC7 family protein [Mycobacterium sp. KMS]
gi|126233620|gb|ABN97020.1| Roadblock/LC7 family protein [Mycobacterium sp. JLS]
Length=138
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/121 (82%), Positives = 107/121 (89%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
LDWLVS+FAREV GV+HA+LVS DGL +AASEH+P ERADQLAAV SGLASL+ GAAQLF
Sbjct 13 LDWLVSRFAREVSGVSHAVLVSADGLLMAASEHMPVERADQLAAVASGLASLSTGAAQLF 72
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
DGG VLQSVVEM+NGYLLLM+VGDGS LA LA CDIGQIGYEMAILVERVG VVQS R
Sbjct 73 DGGYVLQSVVEMENGYLLLMRVGDGSNLATLATRSCDIGQIGYEMAILVERVGTVVQSQR 132
Query 130 R 130
R
Sbjct 133 R 133
>gi|118471090|ref|YP_886015.1| roadblock/LC7 domain-contain protein [Mycobacterium smegmatis
str. MC2 155]
gi|118172377|gb|ABK73273.1| Roadblock/LC7 domain protein [Mycobacterium smegmatis str. MC2
155]
Length=135
Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/121 (83%), Positives = 107/121 (89%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
LDWLVSKFAREV GV+HA+LVS DGL +AASE++P ERADQLAAV SGLASLA GAAQLF
Sbjct 10 LDWLVSKFAREVSGVSHAVLVSADGLLMAASENMPVERADQLAAVASGLASLATGAAQLF 69
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
DGG VLQSVVEM+NGYLLLM+VGDGS LA LA CDIGQIGYEMAILVERVG VVQS R
Sbjct 70 DGGYVLQSVVEMENGYLLLMRVGDGSNLATLAGRSCDIGQIGYEMAILVERVGAVVQSSR 129
Query 130 R 130
R
Sbjct 130 R 130
>gi|145225464|ref|YP_001136142.1| roadblock/LC7 family protein [Mycobacterium gilvum PYR-GCK]
gi|315445817|ref|YP_004078696.1| hypothetical protein Mspyr1_43040 [Mycobacterium sp. Spyr1]
gi|145217950|gb|ABP47354.1| Roadblock/LC7 family protein [Mycobacterium gilvum PYR-GCK]
gi|315264120|gb|ADU00862.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=137
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/125 (75%), Positives = 107/125 (86%), Gaps = 0/125 (0%)
Query 6 PDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGA 65
PDS LDWLV++FA++V GV HA+LVS DGL +AAS H+P+ERADQLAAV SGLASL+ GA
Sbjct 8 PDSSLDWLVARFAQDVAGVTHAILVSADGLLMAASGHIPQERADQLAAVASGLASLSTGA 67
Query 66 AQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVV 125
AQL DGG VLQSV+EM++GYLLLM+VGDGS LA L A DIGQIGYEMAILVERVG VV
Sbjct 68 AQLVDGGHVLQSVIEMEHGYLLLMRVGDGSHLATLTARNGDIGQIGYEMAILVERVGAVV 127
Query 126 QSCRR 130
Q+ RR
Sbjct 128 QAPRR 132
>gi|111020665|ref|YP_703637.1| hypothetical protein RHA1_ro03676 [Rhodococcus jostii RHA1]
gi|226362905|ref|YP_002780685.1| hypothetical protein ROP_34930 [Rhodococcus opacus B4]
gi|110820195|gb|ABG95479.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
gi|226241392|dbj|BAH51740.1| hypothetical protein [Rhodococcus opacus B4]
Length=138
Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/122 (73%), Positives = 102/122 (84%), Gaps = 0/122 (0%)
Query 9 PLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQL 68
PLDWLVS FA +VPGV+HA+LVS DGL +AAS HLP +RA+QLAAVTSGLASL+ G ++L
Sbjct 12 PLDWLVSNFASDVPGVSHAVLVSADGLLMAASAHLPIDRAEQLAAVTSGLASLSAGVSRL 71
Query 69 FDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSC 128
F+GG VLQSVVEMQ+GYLLLM VGDGS LA L CDIGQ+GYEMAILV+RVG VQ+
Sbjct 72 FEGGGVLQSVVEMQHGYLLLMSVGDGSHLATLTDAECDIGQVGYEMAILVDRVGASVQAT 131
Query 129 RR 130
R
Sbjct 132 AR 133
>gi|226308032|ref|YP_002767992.1| hypothetical protein RER_45450 [Rhodococcus erythropolis PR4]
gi|229488969|ref|ZP_04382835.1| roadblock/LC7 family protein [Rhodococcus erythropolis SK121]
gi|226187149|dbj|BAH35253.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229324473|gb|EEN90228.1| roadblock/LC7 family protein [Rhodococcus erythropolis SK121]
Length=138
Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/121 (72%), Positives = 101/121 (84%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
LDWLVS FAR+VPGV+HA++VS DGL A+S HLP +RADQLAAVTSGLASL+ GA++LF
Sbjct 13 LDWLVSAFARDVPGVSHAIIVSADGLLTASSTHLPLDRADQLAAVTSGLASLSAGASRLF 72
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
DGG V+QSVVEM+NGYLLLM VG G+ LAALA GCDIGQIGYEMA LV+RVG +
Sbjct 73 DGGAVMQSVVEMENGYLLLMGVGSGAYLAALAVAGCDIGQIGYEMATLVDRVGTTMDIAP 132
Query 130 R 130
R
Sbjct 133 R 133
>gi|54022635|ref|YP_116877.1| hypothetical protein nfa6680 [Nocardia farcinica IFM 10152]
gi|54014143|dbj|BAD55513.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=137
Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/121 (72%), Positives = 100/121 (83%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
LDWLVS FA EVPGVAHA+LVS DGL +AAS LP +RA+QL+AVT+GLASL+ G + LF
Sbjct 12 LDWLVSNFANEVPGVAHAVLVSADGLLMAASAQLPVDRAEQLSAVTAGLASLSVGVSNLF 71
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GG VLQSVVEM++GYLLLM VGDGS LA L T CDIGQ+GYEMA+LVERVG VQ+
Sbjct 72 EGGTVLQSVVEMEHGYLLLMAVGDGSYLAVLTNTSCDIGQVGYEMALLVERVGQTVQATP 131
Query 130 R 130
R
Sbjct 132 R 132
>gi|226364835|ref|YP_002782617.1| hypothetical protein ROP_54250 [Rhodococcus opacus B4]
gi|226243324|dbj|BAH53672.1| hypothetical protein [Rhodococcus opacus B4]
Length=132
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/121 (72%), Positives = 99/121 (82%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
LDWLVS FAR+VP V HA+LVS DGL +AAS HLP +RA+QLAAVTSGLASL+ G + LF
Sbjct 7 LDWLVSNFARDVPRVTHAVLVSADGLLMAASTHLPLDRAEQLAAVTSGLASLSAGVSTLF 66
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GG VL SVVEMQ+GYLLLM VGDGS LAAL CDIGQ+GYEMAILVERVG +++
Sbjct 67 EGGGVLLSVVEMQHGYLLLMSVGDGSQLAALTTAECDIGQVGYEMAILVERVGSEIEAMP 126
Query 130 R 130
R
Sbjct 127 R 127
>gi|54026940|ref|YP_121182.1| hypothetical protein nfa49660 [Nocardia farcinica IFM 10152]
gi|54018448|dbj|BAD59818.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=136
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/124 (67%), Positives = 102/124 (83%), Gaps = 0/124 (0%)
Query 7 DSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAA 66
D L+WLV++F R+VPGV HA+LVS DGL A S HLP +RA+QLAAVT+GLASL+ GAA
Sbjct 10 DENLNWLVTRFTRDVPGVTHAVLVSADGLLQATSPHLPPDRAEQLAAVTAGLASLSTGAA 69
Query 67 QLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQ 126
QLF+GG+V+QS+V+MQ GYLL+M VG+GS LA LA DIG+IGYEMA+LV+RVG VVQ
Sbjct 70 QLFNGGKVMQSIVDMQRGYLLVMTVGNGSHLAVLANKTHDIGRIGYEMALLVDRVGSVVQ 129
Query 127 SCRR 130
+ R
Sbjct 130 ATAR 133
>gi|84494307|ref|ZP_00993426.1| hypothetical protein JNB_05914 [Janibacter sp. HTCC2649]
gi|84383800|gb|EAP99680.1| hypothetical protein JNB_05914 [Janibacter sp. HTCC2649]
Length=138
Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/125 (65%), Positives = 98/125 (79%), Gaps = 0/125 (0%)
Query 6 PDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGA 65
P LDW+VSKF +V G HA+LVS DGL VA S LP +RA+Q+AAV+SGLASLA GA
Sbjct 9 PRRNLDWVVSKFVDDVAGATHAILVSADGLLVAGSARLPADRAEQMAAVSSGLASLATGA 68
Query 66 AQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVV 125
AQLFDGG V+Q+V+EM+ GYLLLM VGDGS LA L + DIGQIGYEMA+LV+RVG ++
Sbjct 69 AQLFDGGTVMQTVIEMEQGYLLLMSVGDGSNLAVLTSGAADIGQIGYEMALLVQRVGPMI 128
Query 126 QSCRR 130
Q+ R
Sbjct 129 QAEAR 133
>gi|340530938|gb|AEK46143.1| roadblock/LC7 family protein [Amycolatopsis mediterranei S699]
Length=144
Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/125 (64%), Positives = 97/125 (78%), Gaps = 0/125 (0%)
Query 3 ARLPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLA 62
A + + +WLVS F +EVPGVAHA LVS DGL VAA E LPR+RADQL+A+ SGL+SLA
Sbjct 8 AEVAERSRNWLVSAFTQEVPGVAHAALVSADGLLVAADEALPRDRADQLSAIASGLSSLA 67
Query 63 GGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVG 122
G A LF G+V+QSV+EM+ G+LLLM VGDGS L LA GCDIG +GYEM +LV+RVG
Sbjct 68 LGTADLFTAGRVVQSVIEMEQGFLLLMNVGDGSNLVVLANPGCDIGLVGYEMTLLVDRVG 127
Query 123 GVVQS 127
VV++
Sbjct 128 KVVET 132
>gi|300789293|ref|YP_003769584.1| roadblock/LC7 family protein [Amycolatopsis mediterranei U32]
gi|299798807|gb|ADJ49182.1| roadblock/LC7 family protein [Amycolatopsis mediterranei U32]
Length=135
Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/117 (67%), Positives = 94/117 (81%), Gaps = 0/117 (0%)
Query 11 DWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLFD 70
+WLVS F +EVPGVAHA LVS DGL VAA E LPR+RADQL+A+ SGL+SLA G A LF
Sbjct 7 NWLVSAFTQEVPGVAHAALVSADGLLVAADEALPRDRADQLSAIASGLSSLALGTADLFT 66
Query 71 GGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQS 127
G+V+QSV+EM+ G+LLLM VGDGS L LA GCDIG +GYEM +LV+RVG VV++
Sbjct 67 AGRVVQSVIEMEQGFLLLMNVGDGSNLVVLANPGCDIGLVGYEMTLLVDRVGKVVET 123
>gi|300785209|ref|YP_003765500.1| roadblock/LC7 family protein [Amycolatopsis mediterranei U32]
gi|299794723|gb|ADJ45098.1| roadblock/LC7 family protein [Amycolatopsis mediterranei U32]
Length=161
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/127 (61%), Positives = 98/127 (78%), Gaps = 5/127 (3%)
Query 1 MKARLPDSP-----LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVT 55
++ LP P L+WLV+ F ++V GVAHA+LVS DGL VAA + LPRER DQLAA+
Sbjct 18 LRGTLPAPPERSATLNWLVNGFVQDVSGVAHAVLVSADGLLVAADDSLPRERGDQLAAIA 77
Query 56 SGLASLAGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMA 115
+GL+SL+ G A+LF G+V+QSV+EM+ G+LLLM VGDGS L LA+TGCDIG +GYEM
Sbjct 78 AGLSSLSLGTAELFTAGRVVQSVIEMEQGFLLLMSVGDGSNLVVLASTGCDIGLVGYEMT 137
Query 116 ILVERVG 122
+LVERVG
Sbjct 138 MLVERVG 144
>gi|340526649|gb|AEK41854.1| two-component system histidine kinase [Amycolatopsis mediterranei
S699]
Length=1096
Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 99/130 (77%), Gaps = 5/130 (3%)
Query 1 MKARLPDSP-----LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVT 55
++ LP P L+WLV+ F ++V GVAHA+LVS DGL VAA + LPRER DQLAA+
Sbjct 953 LRGTLPAPPERSATLNWLVNGFVQDVSGVAHAVLVSADGLLVAADDSLPRERGDQLAAIA 1012
Query 56 SGLASLAGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMA 115
+GL+SL+ G A+LF G+V+QSV+EM+ G+LLLM VGDGS L LA+TGCDIG +GYEM
Sbjct 1013 AGLSSLSLGTAELFTAGRVVQSVIEMEQGFLLLMSVGDGSNLVVLASTGCDIGLVGYEMT 1072
Query 116 ILVERVGGVV 125
+LVERVG V
Sbjct 1073 MLVERVGQKV 1082
>gi|291302720|ref|YP_003513998.1| Roadblock/LC7 family protein [Stackebrandtia nassauensis DSM
44728]
gi|290571940|gb|ADD44905.1| Roadblock/LC7 family protein [Stackebrandtia nassauensis DSM
44728]
Length=139
Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/121 (62%), Positives = 95/121 (79%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L WL++ FA VPGVAHA+ VS DGL +AAS +LPR+RADQLAAV SG+ SLA GA++ F
Sbjct 10 LGWLLAGFAERVPGVAHAVAVSADGLLMAASRNLPRDRADQLAAVASGMVSLAQGASRCF 69
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GG VLQ+VVEM NG+L LM + DGS+ A LA+ CD+GQ+GYEMA+LV+RVG + +
Sbjct 70 EGGAVLQTVVEMDNGFLFLMSISDGSSFAVLASRTCDVGQVGYEMALLVDRVGQALTPEK 129
Query 130 R 130
R
Sbjct 130 R 130
>gi|238062615|ref|ZP_04607324.1| roadblock family protein [Micromonospora sp. ATCC 39149]
gi|237884426|gb|EEP73254.1| roadblock family protein [Micromonospora sp. ATCC 39149]
Length=134
Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/113 (65%), Positives = 90/113 (80%), Gaps = 0/113 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L WL++ FA VPGVAHA+ VS DGL +A+S LPR+RADQLAA+ SGL SL GAA+ F
Sbjct 7 LGWLLANFADRVPGVAHAVAVSADGLLLASSRDLPRDRADQLAAIASGLVSLTQGAARCF 66
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVG 122
+GG VLQ+VVEM NG+L LM + DGS+ A LAA CD+GQ+GYEMA+LV+RVG
Sbjct 67 EGGAVLQTVVEMDNGFLFLMSISDGSSFAVLAARSCDVGQVGYEMALLVDRVG 119
>gi|330465707|ref|YP_004403450.1| roadblock/lc7 family protein [Verrucosispora maris AB-18-032]
gi|328808678|gb|AEB42850.1| roadblock/lc7 family protein [Verrucosispora maris AB-18-032]
Length=134
Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/113 (65%), Positives = 90/113 (80%), Gaps = 0/113 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L WL++ FA VPGVAHA+ VS DGL +A+S LPR+RADQLAA+ SGL SL GAA+ F
Sbjct 7 LGWLLANFADRVPGVAHAVAVSADGLLLASSRDLPRDRADQLAAIASGLVSLTQGAARCF 66
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVG 122
+GG VLQ+VVEM NG+L LM + DGS+ A LAA CD+GQ+GYEMA+LV+RVG
Sbjct 67 EGGAVLQTVVEMDNGFLFLMSISDGSSFAVLAARSCDVGQVGYEMALLVDRVG 119
>gi|302865292|ref|YP_003833929.1| roadblock/LC7 family protein [Micromonospora aurantiaca ATCC
27029]
gi|315501836|ref|YP_004080723.1| roadblock/lc7 family protein [Micromonospora sp. L5]
gi|302568151|gb|ADL44353.1| Roadblock/LC7 family protein [Micromonospora aurantiaca ATCC
27029]
gi|315408455|gb|ADU06572.1| Roadblock/LC7 family protein [Micromonospora sp. L5]
Length=134
Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/113 (65%), Positives = 90/113 (80%), Gaps = 0/113 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L WL++ FA VPGVAHA+ VS DGL +A+S LPR+RADQLAA+ SGL SL GAA+ F
Sbjct 7 LGWLLANFADRVPGVAHAVAVSADGLLLASSRDLPRDRADQLAAIASGLVSLTQGAARCF 66
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVG 122
+GG VLQ+VVEM NG+L LM + DGS+ A LAA CD+GQ+GYEMA+LV+RVG
Sbjct 67 EGGAVLQTVVEMDNGFLFLMSISDGSSFAVLAARSCDVGQVGYEMALLVDRVG 119
>gi|145593375|ref|YP_001157672.1| roadblock/LC7 family protein [Salinispora tropica CNB-440]
gi|145302712|gb|ABP53294.1| Roadblock/LC7 family protein [Salinispora tropica CNB-440]
Length=134
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/113 (65%), Positives = 89/113 (79%), Gaps = 0/113 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L WL++ FA VPGVAHA+ VS DGL +AAS LPR+RADQLAA+ SGL SL GAA+ F
Sbjct 7 LGWLLANFADRVPGVAHAVAVSADGLLLAASRDLPRDRADQLAAIASGLVSLTQGAARCF 66
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVG 122
+GG VLQ+VVEM NG+L LM + DGS+ A LAA D+GQ+GYEMA+LV+RVG
Sbjct 67 EGGAVLQTVVEMDNGFLFLMSISDGSSFAVLAARNSDVGQVGYEMALLVDRVG 119
>gi|159036418|ref|YP_001535671.1| roadblock/LC7 family protein [Salinispora arenicola CNS-205]
gi|157915253|gb|ABV96680.1| Roadblock/LC7 family protein [Salinispora arenicola CNS-205]
Length=134
Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/113 (65%), Positives = 89/113 (79%), Gaps = 0/113 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L WL++ FA VPGVAHA+ VS DGL +AAS LPR+RADQLAA+ SGL SL GAA+ F
Sbjct 7 LGWLLANFADRVPGVAHAVAVSADGLLLAASRDLPRDRADQLAAIASGLVSLTQGAARCF 66
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVG 122
+GG VLQ+VVEM NG+L LM + DGS+ A LAA D+GQ+GYEMA+LV+RVG
Sbjct 67 EGGAVLQTVVEMDNGFLFLMSISDGSSFAVLAARSSDVGQVGYEMALLVDRVG 119
>gi|256396963|ref|YP_003118527.1| Roadblock/LC7 family protein [Catenulispora acidiphila DSM 44928]
gi|256363189|gb|ACU76686.1| Roadblock/LC7 family protein [Catenulispora acidiphila DSM 44928]
Length=142
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/121 (59%), Positives = 92/121 (77%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F VPGVAH ++VS DGL +A S+ PR+RADQLAAV SGL+SL GAA++F
Sbjct 13 LNWLITNFVDRVPGVAHTVVVSSDGLLLAVSDGFPRDRADQLAAVASGLSSLTQGAARIF 72
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GG V Q+VVEM G+L +M + DGSALA LA++ CD+G IGYEMA+LVER G V+
Sbjct 73 EGGAVTQTVVEMVRGFLFVMAISDGSALAVLASSDCDMGLIGYEMALLVERAGDVLTPAL 132
Query 130 R 130
R
Sbjct 133 R 133
>gi|254392489|ref|ZP_05007669.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|294815322|ref|ZP_06773965.1| Roadblock/LC7 family protein [Streptomyces clavuligerus ATCC
27064]
gi|326443677|ref|ZP_08218411.1| hypothetical protein SclaA2_21544 [Streptomyces clavuligerus
ATCC 27064]
gi|197706156|gb|EDY51968.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|294327921|gb|EFG09564.1| Roadblock/LC7 family protein [Streptomyces clavuligerus ATCC
27064]
Length=137
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/121 (58%), Positives = 90/121 (75%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 8 LNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIF 67
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GG V Q+VVEM+ G+L LM + DGS+LA LA CDIG +GYEMA+LV+R GGV+
Sbjct 68 EGGPVSQTVVEMERGFLFLMSISDGSSLAVLAHPECDIGLVGYEMALLVDRTGGVLTPDL 127
Query 130 R 130
R
Sbjct 128 R 128
>gi|328885284|emb|CCA58523.1| hypothetical protein SVEN_5237 [Streptomyces venezuelae ATCC
10712]
Length=137
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/121 (58%), Positives = 90/121 (75%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 8 LNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIF 67
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GG V Q+VVEM+ G+L LMQV DGS+LA LA CDIG +GYEMA+LV+R G V+
Sbjct 68 EGGPVAQTVVEMERGFLFLMQVSDGSSLAVLAHPECDIGLVGYEMALLVDRAGSVLTPDL 127
Query 130 R 130
R
Sbjct 128 R 128
>gi|297156932|gb|ADI06644.1| hypothetical protein SBI_03523 [Streptomyces bingchenggensis
BCW-1]
Length=137
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/116 (58%), Positives = 89/116 (77%), Gaps = 0/116 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 8 LNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIF 67
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVV 125
+GG V Q+VVEM+ G+L +M + DGS+LA LA CDIG +GYEMA+LV+R GGV+
Sbjct 68 EGGAVNQTVVEMERGFLFIMSISDGSSLAVLAHPECDIGLVGYEMALLVDRTGGVL 123
>gi|21223898|ref|NP_629677.1| hypothetical protein SCO5543 [Streptomyces coelicolor A3(2)]
gi|289768896|ref|ZP_06528274.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|294631590|ref|ZP_06710150.1| roadblock/LC7 domain-containing protein [Streptomyces sp. e14]
gi|3355691|emb|CAA19991.1| conserved hypothetical protein SC1C2.24c [Streptomyces coelicolor
A3(2)]
gi|289699095|gb|EFD66524.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|292834923|gb|EFF93272.1| roadblock/LC7 domain-containing protein [Streptomyces sp. e14]
Length=137
Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/116 (59%), Positives = 88/116 (76%), Gaps = 0/116 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 8 LNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIF 67
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVV 125
+GG V Q+VVEM+ G+L LM V DGS+LA LA CDIG +GYEMA+LV+R G V+
Sbjct 68 EGGNVAQTVVEMERGFLFLMSVSDGSSLAVLAHPECDIGLVGYEMALLVDRAGAVL 123
>gi|325001156|ref|ZP_08122268.1| roadblock/LC7 family protein [Pseudonocardia sp. P1]
Length=142
Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/121 (61%), Positives = 90/121 (75%), Gaps = 0/121 (0%)
Query 2 KARLPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASL 61
+A+ S WLV+ FA VPGVAHA++VS DGL + AS+ LPR+RADQLAAV SGL SL
Sbjct 5 QAQPSQSRFGWLVTNFAERVPGVAHAIVVSADGLLLTASDRLPRDRADQLAAVASGLVSL 64
Query 62 AGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERV 121
GAA+ FD G V+Q+VVEM G +LLM + DGS LA LA+ CDIG +GYEM +LV+RV
Sbjct 65 TQGAARCFDAGGVVQTVVEMDRGIVLLMSISDGSCLAVLASPSCDIGLVGYEMTLLVDRV 124
Query 122 G 122
G
Sbjct 125 G 125
>gi|72161345|ref|YP_289002.1| hypothetical protein Tfu_0941 [Thermobifida fusca YX]
gi|71915077|gb|AAZ54979.1| conserved hypothetical protein [Thermobifida fusca YX]
Length=133
Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/125 (57%), Positives = 92/125 (74%), Gaps = 0/125 (0%)
Query 6 PDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGA 65
P + L+WL++ FA VP VAHA++VS DGLP+AAS P +RADQLAA+ SGL+SL GA
Sbjct 4 PVNELNWLITDFANRVPDVAHAIVVSSDGLPLAASAGFPADRADQLAAIASGLSSLTQGA 63
Query 66 AQLFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVV 125
A++F+GG V Q+VVEM+ G LL+M + DGS LA LAA CD+G +GYEM +LVER G +
Sbjct 64 ARVFEGGAVAQTVVEMERGLLLIMAISDGSCLAVLAAAECDLGLVGYEMTLLVERAGRAL 123
Query 126 QSCRR 130
R
Sbjct 124 TPAAR 128
>gi|329936805|ref|ZP_08286484.1| hypothetical protein SGM_1976 [Streptomyces griseoaurantiacus
M045]
gi|329303730|gb|EGG47614.1| hypothetical protein SGM_1976 [Streptomyces griseoaurantiacus
M045]
Length=140
Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/121 (57%), Positives = 89/121 (74%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 11 LNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIF 70
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GG V Q+VVEM+ G+L LM + DGS+LA LA CDIG +GYEMA+LV+R G V+
Sbjct 71 EGGNVAQTVVEMERGFLFLMSISDGSSLAVLAHPECDIGLVGYEMALLVDRAGAVLTPDL 130
Query 130 R 130
R
Sbjct 131 R 131
>gi|291437059|ref|ZP_06576449.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
gi|291339954|gb|EFE66910.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
Length=137
Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/116 (59%), Positives = 88/116 (76%), Gaps = 0/116 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 8 LNWLITNFVDNTPGVSHTVVVSADGLLLALSEGFPRDRADQLAAVASGLTSLTAGASRIF 67
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVV 125
+GG V Q+VVEM+ G+L LM V DGS+LA LA CDIG +GYEMA+LV+R G V+
Sbjct 68 EGGNVAQTVVEMERGFLFLMSVSDGSSLAVLAHPECDIGLVGYEMALLVDRAGAVL 123
>gi|297202592|ref|ZP_06919989.1| roadblock/LC7 family protein [Streptomyces sviceus ATCC 29083]
gi|302554375|ref|ZP_07306717.1| roadblock/LC7 family protein [Streptomyces viridochromogenes
DSM 40736]
gi|302558193|ref|ZP_07310535.1| roadblock/LC7 domain-containing protein [Streptomyces griseoflavus
Tu4000]
gi|197709878|gb|EDY53912.1| roadblock/LC7 family protein [Streptomyces sviceus ATCC 29083]
gi|302471993|gb|EFL35086.1| roadblock/LC7 family protein [Streptomyces viridochromogenes
DSM 40736]
gi|302475811|gb|EFL38904.1| roadblock/LC7 domain-containing protein [Streptomyces griseoflavus
Tu4000]
Length=137
Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/116 (59%), Positives = 88/116 (76%), Gaps = 0/116 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 8 LNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIF 67
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVV 125
+GG V Q+VVEM+ G+L LM V DGS+LA LA CDIG +GYEMA+LV+R G V+
Sbjct 68 EGGSVAQTVVEMERGFLFLMSVSDGSSLAVLAHPECDIGLVGYEMALLVDRAGAVL 123
>gi|302522106|ref|ZP_07274448.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|318062793|ref|ZP_07981514.1| hypothetical protein SSA3_32981 [Streptomyces sp. SA3_actG]
gi|318081551|ref|ZP_07988866.1| hypothetical protein SSA3_33702 [Streptomyces sp. SA3_actF]
gi|333024218|ref|ZP_08452282.1| hypothetical protein STTU_1722 [Streptomyces sp. Tu6071]
gi|302431001|gb|EFL02817.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|332744070|gb|EGJ74511.1| hypothetical protein STTU_1722 [Streptomyces sp. Tu6071]
Length=137
Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/121 (57%), Positives = 90/121 (75%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 8 LNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIF 67
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GG V Q+VVEM++G+L +M V DGS+LA LA CDIG +GYEMA+LV+R G V+
Sbjct 68 EGGTVNQTVVEMEHGFLFIMSVSDGSSLAVLAHPECDIGLVGYEMALLVDRAGAVLTPDL 127
Query 130 R 130
R
Sbjct 128 R 128
>gi|331699466|ref|YP_004335705.1| Roadblock/LC7 family protein [Pseudonocardia dioxanivorans CB1190]
gi|326954155|gb|AEA27852.1| Roadblock/LC7 family protein [Pseudonocardia dioxanivorans CB1190]
Length=140
Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/115 (62%), Positives = 88/115 (77%), Gaps = 0/115 (0%)
Query 8 SPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQ 67
S WLV+ FA VPGVAHA++VS DGL + +S+ LPR+RADQLAAV+SGL SL GAA+
Sbjct 9 SRFGWLVTNFAERVPGVAHAIVVSADGLLLTSSDRLPRDRADQLAAVSSGLVSLTQGAAR 68
Query 68 LFDGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVG 122
FD G V+Q+VVEM G +LLM + DGS L+ LA+ CDIG IGYEM +LV+RVG
Sbjct 69 CFDAGGVVQTVVEMDRGIVLLMSISDGSCLSVLASPTCDIGLIGYEMTLLVDRVG 123
>gi|290957151|ref|YP_003488333.1| hypothetical protein SCAB_26701 [Streptomyces scabiei 87.22]
gi|260646677|emb|CBG69774.1| RarB (conservon) homolog [Streptomyces scabiei 87.22]
Length=137
Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/121 (58%), Positives = 89/121 (74%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 8 LNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIF 67
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GG V Q+VVEM+ G+L LM V DGS+LA LA CDIG +GYEMA+LV+R G V+
Sbjct 68 EGGDVAQTVVEMERGFLFLMSVSDGSSLAVLAHPECDIGLVGYEMALLVDRAGAVLTPDL 127
Query 130 R 130
R
Sbjct 128 R 128
>gi|159039784|ref|YP_001539037.1| roadblock/LC7 family protein [Salinispora arenicola CNS-205]
gi|157918619|gb|ABW00047.1| Roadblock/LC7 family protein [Salinispora arenicola CNS-205]
Length=135
Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/111 (62%), Positives = 87/111 (79%), Gaps = 0/111 (0%)
Query 12 WLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLFDG 71
WL+S FA V G+AH + VS DGL +A+S LP +RADQLAA+TSG+ SL GAA++F
Sbjct 12 WLLSNFADSVAGIAHVVAVSADGLLLASSRDLPADRADQLAAITSGVVSLTDGAARMFSA 71
Query 72 GQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVG 122
G VLQ+V+EM +GYL LM + DGS++A LAA CD+GQ+GYEMA+LVERVG
Sbjct 72 GGVLQTVIEMDSGYLFLMSISDGSSMAVLAARSCDVGQVGYEMALLVERVG 122
>gi|295836339|ref|ZP_06823272.1| roadblock/LC7 domain-containing protein [Streptomyces sp. SPB74]
gi|197699345|gb|EDY46278.1| roadblock/LC7 domain-containing protein [Streptomyces sp. SPB74]
Length=137
Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/121 (57%), Positives = 90/121 (75%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 8 LNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIF 67
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GG V Q+VVEM++G+L +M V DGS+LA LA CDIG +GYEMA+LV+R G V+
Sbjct 68 EGGTVNQTVVEMEHGFLFIMSVSDGSSLAVLAHPECDIGLVGYEMALLVDRAGAVLTPDL 127
Query 130 R 130
R
Sbjct 128 R 128
>gi|345009557|ref|YP_004811911.1| Roadblock/LC7 family protein [Streptomyces violaceusniger Tu
4113]
gi|344035906|gb|AEM81631.1| Roadblock/LC7 family protein [Streptomyces violaceusniger Tu
4113]
Length=140
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/121 (57%), Positives = 89/121 (74%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 11 LNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIF 70
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GG V Q+VVEM+ G+L +M V DGS+LA LA CDIG +GYEMA+LV+R G V+
Sbjct 71 EGGMVNQTVVEMERGFLFIMSVSDGSSLAVLAHPECDIGLVGYEMALLVDRAGNVLTPDL 130
Query 130 R 130
R
Sbjct 131 R 131
>gi|297191848|ref|ZP_06909246.1| roadblock/LC7 family protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197722042|gb|EDY65950.1| roadblock/LC7 family protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=137
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/121 (58%), Positives = 89/121 (74%), Gaps = 0/121 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 8 LNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIF 67
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCR 129
+GG V Q+VVEM+ G+L LM V DGS+LA LA CDIG +GYEMA+LV+R G V+
Sbjct 68 EGGPVSQTVVEMERGFLFLMSVSDGSSLAVLAHPDCDIGLVGYEMALLVDRAGSVLTPDL 127
Query 130 R 130
R
Sbjct 128 R 128
>gi|29829237|ref|NP_823871.1| hypothetical protein SAV_2695 [Streptomyces avermitilis MA-4680]
gi|29606344|dbj|BAC70406.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=137
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/116 (58%), Positives = 88/116 (76%), Gaps = 0/116 (0%)
Query 10 LDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLF 69
L+WL++ F PGV+H ++VS DGL +A SE PR+RADQLAAV SGL SL GA+++F
Sbjct 8 LNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIF 67
Query 70 DGGQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVV 125
+GG V Q+VVEM+ G+L LM V DGS+LA L+ CDIG +GYEMA+LV+R G V+
Sbjct 68 EGGTVAQTVVEMERGFLFLMSVSDGSSLAVLSHPECDIGLVGYEMALLVDRAGAVL 123
>gi|145596385|ref|YP_001160682.1| roadblock/LC7 family protein [Salinispora tropica CNB-440]
gi|145305722|gb|ABP56304.1| Roadblock/LC7 family protein [Salinispora tropica CNB-440]
Length=135
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/111 (61%), Positives = 87/111 (79%), Gaps = 0/111 (0%)
Query 12 WLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLFDG 71
WL+S FA V G+AH + VS DGL +A+S LP +RADQLAA+TSG+ SL GA+++F
Sbjct 12 WLLSNFADSVAGIAHVVAVSADGLLLASSRDLPADRADQLAAITSGVVSLTDGASRMFSA 71
Query 72 GQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVG 122
G VLQ+V+EM +GYL LM + DGS++A LAA CD+GQ+GYEMA+LVERVG
Sbjct 72 GGVLQTVIEMDSGYLFLMSISDGSSMAVLAARSCDVGQVGYEMALLVERVG 122
Lambda K H
0.319 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127765705240
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40