BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3369
Length=144
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610505|ref|NP_217886.1| hypothetical protein Rv3369 [Mycoba... 293 4e-78
gi|308232436|ref|ZP_07416047.2| hypothetical protein TMAG_03318 ... 276 6e-73
gi|183981181|ref|YP_001849472.1| hypothetical protein MMAR_1159 ... 216 1e-54
gi|342861582|ref|ZP_08718229.1| hypothetical protein MCOL_21956 ... 203 8e-51
gi|289576103|ref|ZP_06456330.1| conserved hypothetical protein [... 190 8e-47
gi|289752085|ref|ZP_06511463.1| conserved hypothetical protein [... 106 1e-21
gi|302530987|ref|ZP_07283329.1| predicted protein [Streptomyces ... 95.5 2e-18
gi|300790785|ref|YP_003771076.1| pyridoxamine 5'-phosphate oxida... 90.1 9e-17
gi|226362322|ref|YP_002780100.1| hypothetical protein ROP_29080 ... 86.3 1e-15
gi|108803373|ref|YP_643310.1| pyridoxamine 5'-phosphate oxidase-... 82.8 2e-14
gi|111020306|ref|YP_703278.1| transposase [Rhodococcus jostii RH... 79.0 2e-13
gi|269929088|ref|YP_003321409.1| PPOX class putative F420-depend... 77.4 7e-13
gi|284031386|ref|YP_003381317.1| pyridoxamine 5'-phosphate oxida... 73.6 9e-12
gi|288917045|ref|ZP_06411416.1| pyridoxamine 5'-phosphate oxidas... 73.2 1e-11
gi|54022717|ref|YP_116959.1| hypothetical protein nfa7500 [Nocar... 70.9 6e-11
gi|23008107|ref|ZP_00049689.1| hypothetical protein Magn03003251... 70.5 8e-11
gi|298251995|ref|ZP_06975798.1| putative F420-dependent enzyme [... 70.1 1e-10
gi|111225977|ref|YP_716771.1| hypothetical protein FRAAL6644 [Fr... 65.9 2e-09
gi|221635950|ref|YP_002523826.1| ppox class probable f420-depend... 65.5 3e-09
gi|256394681|ref|YP_003116245.1| pyridoxamine 5'-phosphate oxida... 64.7 4e-09
gi|298249766|ref|ZP_06973570.1| pyridoxamine 5'-phosphate oxidas... 62.0 2e-08
gi|284043799|ref|YP_003394139.1| PPOX class F420-dependent enzym... 61.2 5e-08
gi|325001121|ref|ZP_08122233.1| pyridoxamine 5'-phosphate oxidas... 59.3 2e-07
gi|2222701|emb|CAB09924.1| hypothetical protein MLCL383.22c [Myc... 58.2 4e-07
gi|229819924|ref|YP_002881450.1| pyridoxamine 5'-phosphate oxida... 49.7 1e-04
gi|257056794|ref|YP_003134626.1| Pyridoxamine 5'-phosphate oxida... 46.6 0.001
gi|284032909|ref|YP_003382840.1| pyridoxamine 5'-phosphate oxida... 45.8 0.002
gi|148656792|ref|YP_001276997.1| pyridoxamine 5'-phosphate oxida... 45.8 0.002
gi|134102206|ref|YP_001107867.1| pyridoxamine 5'-phosphate oxida... 45.4 0.003
gi|302525430|ref|ZP_07277772.1| conserved hypothetical protein [... 43.9 0.008
gi|295838872|ref|ZP_06825805.1| conserved hypothetical protein [... 43.1 0.012
gi|318060389|ref|ZP_07979112.1| pyridoxamine 5'-phosphate oxidas... 42.7 0.015
gi|156742701|ref|YP_001432830.1| pyridoxamine 5'-phosphate oxida... 42.7 0.016
gi|333027074|ref|ZP_08455138.1| hypothetical protein STTU_4577 [... 42.7 0.016
gi|331694186|ref|YP_004330425.1| putative F420-dependent enzyme ... 42.7 0.016
gi|302519096|ref|ZP_07271438.1| conserved hypothetical protein [... 41.6 0.044
gi|336180020|ref|YP_004585395.1| putative F420-dependent protein... 41.2 0.051
gi|296392996|ref|YP_003657880.1| F420-dependent protein [Segnili... 40.4 0.079
gi|108804025|ref|YP_643962.1| pyridoxamine 5'-phosphate oxidase-... 40.4 0.081
gi|111018885|ref|YP_701857.1| hypothetical protein RHA1_ro01888 ... 40.4 0.088
gi|284031244|ref|YP_003381175.1| pyridoxamine 5'-phosphate oxida... 40.4 0.090
gi|337764716|emb|CCB73425.1| conserved protein of unknown functi... 40.0 0.10
gi|271968899|ref|YP_003343095.1| hypothetical protein Sros_7681 ... 40.0 0.12
gi|297204353|ref|ZP_06921750.1| conserved hypothetical protein [... 39.3 0.21
gi|295838137|ref|ZP_06825070.1| conserved hypothetical protein [... 38.9 0.24
gi|284993281|ref|YP_003411836.1| pyridoxamine 5'-phosphate oxida... 38.5 0.32
gi|240173346|ref|ZP_04752004.1| hypothetical protein MkanA1_2879... 38.5 0.33
gi|291435416|ref|ZP_06574806.1| conserved hypothetical protein [... 38.5 0.35
gi|296129958|ref|YP_003637208.1| putative F420-dependent enzyme ... 38.1 0.39
gi|284031264|ref|YP_003381195.1| pyridoxamine 5'-phosphate oxida... 38.1 0.43
>gi|15610505|ref|NP_217886.1| hypothetical protein Rv3369 [Mycobacterium tuberculosis H37Rv]
gi|15842965|ref|NP_338002.1| hypothetical protein MT3478 [Mycobacterium tuberculosis CDC1551]
gi|31794552|ref|NP_857045.1| hypothetical protein Mb3404 [Mycobacterium bovis AF2122/97]
52 more sequence titles
Length=144
Score = 293 bits (751), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%)
Query 1 MWAGYRWAMSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQA 60
MWAGYRWAMSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQA
Sbjct 1 MWAGYRWAMSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQA 60
Query 61 AKVAHITAHPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGL 120
AKVAHITAHPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGL
Sbjct 61 AKVAHITAHPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGL 120
Query 121 TEAIAAYSTRLKITPTRVWTTPTG 144
TEAIAAYSTRLKITPTRVWTTPTG
Sbjct 121 TEAIAAYSTRLKITPTRVWTTPTG 144
>gi|308232436|ref|ZP_07416047.2| hypothetical protein TMAG_03318 [Mycobacterium tuberculosis SUMu001]
gi|308370241|ref|ZP_07420773.2| hypothetical protein TMBG_03839 [Mycobacterium tuberculosis SUMu002]
gi|308371321|ref|ZP_07424577.2| hypothetical protein TMCG_02520 [Mycobacterium tuberculosis SUMu003]
21 more sequence titles
Length=136
Score = 276 bits (706), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)
Query 9 MSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITA 68
MSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITA
Sbjct 1 MSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITA 60
Query 69 HPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLTEAIAAYS 128
HPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLTEAIAAYS
Sbjct 61 HPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLTEAIAAYS 120
Query 129 TRLKITPTRVWTTPTG 144
TRLKITPTRVWTTPTG
Sbjct 121 TRLKITPTRVWTTPTG 136
>gi|183981181|ref|YP_001849472.1| hypothetical protein MMAR_1159 [Mycobacterium marinum M]
gi|183174507|gb|ACC39617.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=136
Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/136 (84%), Positives = 123/136 (91%), Gaps = 0/136 (0%)
Query 9 MSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITA 68
M +ELTQEVS RL SD YGWLTTVA+SGQPVPRL+WFYFDG DLTVYSMP+AAKVAHI
Sbjct 1 MGIELTQEVSGRLASDHYGWLTTVAKSGQPVPRLIWFYFDGADLTVYSMPKAAKVAHILQ 60
Query 69 HPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLTEAIAAYS 128
P VSLNLDSDGNG GIIVVGGTA V ATDVDCR+D PYWAKYR+DAA+FGLTEA+A+YS
Sbjct 61 RPHVSLNLDSDGNGGGIIVVGGTADVAATDVDCREDEPYWAKYRDDAAEFGLTEAMASYS 120
Query 129 TRLKITPTRVWTTPTG 144
TRLKITPTRVWTTPTG
Sbjct 121 TRLKITPTRVWTTPTG 136
>gi|342861582|ref|ZP_08718229.1| hypothetical protein MCOL_21956 [Mycobacterium colombiense CECT
3035]
gi|342131071|gb|EGT84360.1| hypothetical protein MCOL_21956 [Mycobacterium colombiense CECT
3035]
Length=136
Score = 203 bits (516), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 107/136 (79%), Positives = 120/136 (89%), Gaps = 0/136 (0%)
Query 9 MSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITA 68
MS+E TQEV+ RLTSD YGWLTTVA+SGQPVPRL+WFYFDG LTVYSMPQ+AKVAH+ A
Sbjct 1 MSIEFTQEVAGRLTSDHYGWLTTVAKSGQPVPRLIWFYFDGAKLTVYSMPQSAKVAHVKA 60
Query 69 HPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLTEAIAAYS 128
HP+VSLNLDS+GNG GIIVVGGTA V AT VDCR+D PYWAKY E AA+FGLTEA+ +YS
Sbjct 61 HPRVSLNLDSNGNGGGIIVVGGTATVEATGVDCREDEPYWAKYSEVAAQFGLTEAMGSYS 120
Query 129 TRLKITPTRVWTTPTG 144
TRL ITPT+ WTTPTG
Sbjct 121 TRLVITPTKEWTTPTG 136
>gi|289576103|ref|ZP_06456330.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289540534|gb|EFD45112.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=143
Score = 190 bits (482), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)
Query 52 LTVYSMPQAAKVAHITAHPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKY 111
LTVYSMPQAAKVAHITAHPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKY
Sbjct 51 LTVYSMPQAAKVAHITAHPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKY 110
Query 112 REDAAKFGLTEAIAAYSTRLKITPTRVWTTPTG 144
REDAAKFGLTEAIAAYSTRLKITPTRVWTTPTG
Sbjct 111 REDAAKFGLTEAIAAYSTRLKITPTRVWTTPTG 143
>gi|289752085|ref|ZP_06511463.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289692672|gb|EFD60101.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=50
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/50 (100%), Positives = 50/50 (100%), Gaps = 0/50 (0%)
Query 1 MWAGYRWAMSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGT 50
MWAGYRWAMSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGT
Sbjct 1 MWAGYRWAMSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGT 50
>gi|302530987|ref|ZP_07283329.1| predicted protein [Streptomyces sp. AA4]
gi|302439882|gb|EFL11698.1| predicted protein [Streptomyces sp. AA4]
Length=133
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/116 (45%), Positives = 69/116 (60%), Gaps = 7/116 (6%)
Query 28 WLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNLDSDGNGAGIIV 87
WLTTV SG+P PR VWF DG D+ V+S P AK+ H+ A+P+VS +L+SD +G IIV
Sbjct 19 WLTTVTASGRPAPRPVWFVLDGEDIVVFSRPGTAKLRHLAANPEVSFHLNSDEHGGSIIV 78
Query 88 VGGTAAVVATDVDCRDDAP-YWAKYREDAAKFGLTEAI---AAYSTRLKITPTRVW 139
V G A + D +AP Y AKY+ A G + A YS R++I P + W
Sbjct 79 VSGRAHI---DEAKASEAPGYLAKYQRHYAGIGFADPAAFDADYSVRIRIVPEKSW 131
>gi|300790785|ref|YP_003771076.1| pyridoxamine 5'-phosphate oxidase [Amycolatopsis mediterranei
U32]
gi|299800299|gb|ADJ50674.1| pyridoxamine 5'-phosphate oxidase [Amycolatopsis mediterranei
U32]
gi|340532477|gb|AEK47682.1| pyridoxamine 5'-phosphate oxidase [Amycolatopsis mediterranei
S699]
Length=129
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/115 (46%), Positives = 67/115 (59%), Gaps = 6/115 (5%)
Query 28 WLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNLDSDGNGAGIIV 87
WLTTV G+P PR VWF DG D+ V+S P AK+ HI A+P VS +L+SD +G ++V
Sbjct 16 WLTTVTSKGRPAPRPVWFVLDGDDIVVFSEPGTAKLRHIEANPGVSFHLNSDEHGGSVLV 75
Query 88 VGGTAAVVATDVDCRDDAP-YWAKYREDAAKFGLTEA--IAAYSTRLKITPTRVW 139
V GTA V A +AP Y KY A G+T A YS R+++ P R W
Sbjct 76 VNGTAHVEAGK---PSEAPGYLDKYGARYAGIGVTADGFDAKYSVRIRVVPERSW 127
>gi|226362322|ref|YP_002780100.1| hypothetical protein ROP_29080 [Rhodococcus opacus B4]
gi|226240807|dbj|BAH51155.1| hypothetical protein [Rhodococcus opacus B4]
Length=138
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/128 (38%), Positives = 70/128 (55%), Gaps = 2/128 (1%)
Query 13 LTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQV 72
+T+ V+ RL + WLTTV R+G PVP VWF + GT+ ++S P AK+A+I +PQV
Sbjct 8 ITESVAERLARETVVWLTTVGRTGAPVPTPVWFEWSGTEFLIFSQPATAKLANIEKNPQV 67
Query 73 SLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLTEA--IAAYSTR 130
+LN +S +G + V G A V + A Y KYR D A T Y+T
Sbjct 68 ALNFNSSAHGGEVSVFTGKAHVDPDGPTAEEWAAYVEKYRGDMAGLDYTPERFRQDYATL 127
Query 131 LKITPTRV 138
+++ P R+
Sbjct 128 IRVAPDRL 135
>gi|108803373|ref|YP_643310.1| pyridoxamine 5'-phosphate oxidase-like protein [Rubrobacter xylanophilus
DSM 9941]
gi|108764616|gb|ABG03498.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Rubrobacter xylanophilus DSM 9941]
Length=134
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/123 (37%), Positives = 63/123 (52%), Gaps = 2/123 (1%)
Query 17 VSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNL 76
V RL + WLTTV GQP P VWF + +YS P A K+ +I ++P+V LNL
Sbjct 8 VERRLREEKILWLTTVRADGQPQPVPVWFLWGTEGFLIYSRPNAQKLRNIRSNPRVGLNL 67
Query 77 DSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLTEAIAA--YSTRLKIT 134
+ D G ++ GTA +V + Y KYRED + G A A Y+ +++T
Sbjct 68 NCDERGGSVVRAEGTAEIVEDAAPASEIPEYVQKYREDMRRLGYEPAGFALDYAVAVRVT 127
Query 135 PTR 137
P R
Sbjct 128 PRR 130
>gi|111020306|ref|YP_703278.1| transposase [Rhodococcus jostii RHA1]
gi|110819836|gb|ABG95120.1| transposase [Rhodococcus jostii RHA1]
Length=556
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/125 (39%), Positives = 67/125 (54%), Gaps = 2/125 (1%)
Query 13 LTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQV 72
+T V+ RL + WLTTV R+ PVP VWF + GT+ ++S P AK+A+I +PQV
Sbjct 426 ITASVADRLARESIVWLTTVGRNDTPVPTPVWFSWSGTEFLIFSQPGTAKLANIGRNPQV 485
Query 73 SLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLT--EAIAAYSTR 130
+LN +S G + V G A V A + Y KY ED A T + YST
Sbjct 486 ALNFNSSPTGGDVSVFTGKARVDADGPSPEEWETYVEKYHEDMAGLDYTPEKFRQDYSTL 545
Query 131 LKITP 135
+++TP
Sbjct 546 VRVTP 550
>gi|269929088|ref|YP_003321409.1| PPOX class putative F420-dependent enzyme [Sphaerobacter thermophilus
DSM 20745]
gi|269788445|gb|ACZ40587.1| PPOX class putative F420-dependent enzyme [Sphaerobacter thermophilus
DSM 20745]
Length=138
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/125 (35%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query 17 VSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNL 76
V RL + WLTTV R GQP P VWF +DG + +YS P KV +I +P+VSL+
Sbjct 12 VERRLREEEVIWLTTVRRDGQPQPIPVWFLWDGETILIYSRPDQQKVRNIRHNPKVSLHF 71
Query 77 DSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGL-TEAIAA-YSTRLKIT 134
++D G ++ + G A +V + KYR+ + G E+ A YS +++
Sbjct 72 NTDEYGDSVVRIDGVAEIVPDAPPVTEVPEMIEKYRDGIRRIGSDPESFARDYSVAIRVV 131
Query 135 PTRVW 139
P R +
Sbjct 132 PQRFY 136
>gi|284031386|ref|YP_003381317.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Kribbella flavida DSM 17836]
gi|283810679|gb|ADB32518.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Kribbella flavida DSM 17836]
Length=140
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/131 (33%), Positives = 70/131 (54%), Gaps = 2/131 (1%)
Query 10 SVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAH 69
S E ++ +L +L WLTTV SG P P VWF+++G + V+S AKV +I +
Sbjct 7 STEFGARITKQLADELVIWLTTVGGSGTPAPNPVWFHWNGQQVLVFSQAAKAKVHNIERN 66
Query 70 PQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLT--EAIAAY 127
P+V+L+ ++ G + V+ GTA + + + A Y AKY E A ++ + Y
Sbjct 67 PRVALHFNATFTGGDVGVLSGTAVIDGSGPTAEELAMYDAKYAEGLASLTMSAEDFHREY 126
Query 128 STRLKITPTRV 138
++ITP ++
Sbjct 127 PVLIRITPDKL 137
>gi|288917045|ref|ZP_06411416.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Frankia sp. EUN1f]
gi|288351585|gb|EFC85791.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Frankia sp. EUN1f]
Length=149
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/114 (36%), Positives = 55/114 (49%), Gaps = 2/114 (1%)
Query 28 WLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNLDSDGNGAGIIV 87
WL TV+++GQP R VWF L +S P+A KV H+ A+P VS+ +D ++V
Sbjct 34 WLATVSQAGQPSIRPVWFVLHEGKLVTFSTPKAWKVRHVQANPAVSVTFHTDRAAKSVLV 93
Query 88 VGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLTEAI--AAYSTRLKITPTRVW 139
V G A V YW KY + +G T Y R+ ITP + W
Sbjct 94 VTGRAEVTLEGTPPSAIPAYWKKYETEMNHYGYTPERFDELYPVRITITPDKSW 147
>gi|54022717|ref|YP_116959.1| hypothetical protein nfa7500 [Nocardia farcinica IFM 10152]
gi|54014225|dbj|BAD55595.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=147
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/129 (32%), Positives = 67/129 (52%), Gaps = 2/129 (1%)
Query 12 ELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQ 71
E +V+ RL + WLTTV +G P P VWF + + ++S P K+ +I +P+
Sbjct 16 EFGAKVAERLEREQVVWLTTVGPTGTPQPNPVWFQWRDGEFLLFSQPDTPKIRNIRRNPR 75
Query 72 VSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLT--EAIAAYST 129
VS++ +S +G ++V GTA + ++ A + AKY E +T + A YS
Sbjct 76 VSVHFNSTVHGGDVVVFTGTARIAEDRPTEQEIAAFTAKYTEGLRDIPMTAEQFYADYSV 135
Query 130 RLKITPTRV 138
L+I P R+
Sbjct 136 PLRIAPDRL 144
>gi|23008107|ref|ZP_00049689.1| hypothetical protein Magn03003251 [Magnetospirillum magnetotacticum
MS-1]
Length=141
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/113 (37%), Positives = 63/113 (56%), Gaps = 1/113 (0%)
Query 10 SVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTD-LTVYSMPQAAKVAHITA 68
+ L +ARL + WL TV G P P VWF +DG D + V S P+ AK+ ++ A
Sbjct 7 TTRLGSRAAARLADEQVVWLVTVDPHGTPQPTPVWFRWDGADEIVVKSQPRTAKLRNVRA 66
Query 69 HPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLT 121
HP+V+++L+S +G ++V+ GTA+V + + A Y AKY + G T
Sbjct 67 HPRVAVHLNSTPSGGDVVVLTGTASVDDDGLSAAERAAYDAKYDDGIRGLGTT 119
>gi|298251995|ref|ZP_06975798.1| putative F420-dependent enzyme [Ktedonobacter racemifer DSM 44963]
gi|297546587|gb|EFH80455.1| putative F420-dependent enzyme [Ktedonobacter racemifer DSM 44963]
Length=146
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/128 (34%), Positives = 65/128 (51%), Gaps = 4/128 (3%)
Query 15 QEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGT--DLTVYSMPQAAKVAHITAHPQV 72
+ V R+ + WLTTV G P P WF++D T + VY++ A ++ + + QV
Sbjct 14 KNVRRRVQEEYLLWLTTVDTRGMPQPAPTWFWWDETASNFLVYNLTHAKRLDFVHRNSQV 73
Query 73 SLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYRE-DAAKFGLTEAIAA-YSTR 130
+L+ + D G+GIIV G A + + Y AKY + FG E AA YS
Sbjct 74 ALHFNGDQTGSGIIVFTGHAQISTAEPPADQHPLYLAKYHHWMTSMFGSPEQFAAEYSVA 133
Query 131 LKITPTRV 138
L+I+P +V
Sbjct 134 LRISPIKV 141
>gi|111225977|ref|YP_716771.1| hypothetical protein FRAAL6644 [Frankia alni ACN14a]
gi|111153509|emb|CAJ65267.1| Hypothetical protein FRAAL6644 [Frankia alni ACN14a]
Length=143
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/129 (40%), Positives = 66/129 (52%), Gaps = 10/129 (7%)
Query 16 EVSARLTSDLYGWLTTVARSGQPVPRLVWFYFD-GTD-LTVYSMPQAAKVAHITAHPQVS 73
+V+ RL D WLT+ RSG P P VWF +D TD +YS P A +++ I +P+ S
Sbjct 14 KVARRLGEDRIAWLTSTDRSGTPQPAPVWFLWDFATDSAQLYSEPTARRLSRIQTNPRSS 73
Query 74 LNLDSDGNGAGIIVVGGTAAVVATDVDCR--DDAP-YWAKYREDAAK-FGLTEAIAA-YS 128
L+LD DG G +V+ G V+ TD D P Y KY E A FG E A YS
Sbjct 74 LHLDDDGRGGDFVVLTG---VLTTDPQAPPADQNPGYLVKYSEWAKNVFGSVERFATLYS 130
Query 129 TRLKITPTR 137
L+ R
Sbjct 131 VPLRFRAER 139
>gi|221635950|ref|YP_002523826.1| ppox class probable f420-dependent enzyme, family [Thermomicrobium
roseum DSM 5159]
gi|221157275|gb|ACM06393.1| ppox class probable f420-dependent enzyme, family [Thermomicrobium
roseum DSM 5159]
Length=134
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/124 (32%), Positives = 64/124 (52%), Gaps = 2/124 (1%)
Query 17 VSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNL 76
V +L ++ WL TV GQP VWF +D + +YS P++ KV +I +P+VSL+
Sbjct 8 VLQQLRNESIIWLATVRPDGQPQVVPVWFLWDDGAVLIYSRPRSQKVRNIRHNPRVSLHF 67
Query 77 DSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLTEAIAA--YSTRLKIT 134
+SD + G A +V+ + Y AKYR+ ++ G+T A YS +++
Sbjct 68 NSDPWAEHVTRFDGRAELVSDAALANERPAYLAKYRDGISRIGMTPETFAREYSLLIRVY 127
Query 135 PTRV 138
P +
Sbjct 128 PEHL 131
>gi|256394681|ref|YP_003116245.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding [Catenulispora
acidiphila DSM 44928]
gi|256360907|gb|ACU74404.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding [Catenulispora
acidiphila DSM 44928]
Length=142
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/130 (39%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query 15 QEVSARLTSDLYGWLTTVARSGQPVPRLVWFYF--DGTDLTVYSMPQAAKVAHITAHPQV 72
Q V RL S+L WLTTV GQPV VWF DGT L +YS AK+A+I A+P+V
Sbjct 13 QRVLGRLNSNLMVWLTTVRPDGQPVSVPVWFLAREDGT-LLIYSRANKAKLANIAANPKV 71
Query 73 SLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYRED-AAKFGLTEAIA-AYSTR 130
SL LD G I+ + G A + + + AKY E A F E ++
Sbjct 72 SLGLDVTDIGRNIVRLEGVAHHDPSLPRAHEHPAFLAKYIERMGAMFDTPENFGDQFTAG 131
Query 131 LKITPTRVWT 140
L I T+V+
Sbjct 132 LVIQLTKVYV 141
>gi|298249766|ref|ZP_06973570.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Ktedonobacter racemifer DSM 44963]
gi|297547770|gb|EFH81637.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Ktedonobacter racemifer DSM 44963]
Length=139
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/135 (29%), Positives = 73/135 (55%), Gaps = 6/135 (4%)
Query 8 AMSVE-LTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHI 66
+ S+E L + RLT+++ W TTV G+P VWF ++G + ++S K+ ++
Sbjct 2 SFSIETLKEHTKERLTNEVIAWFTTVRPDGRPHSVPVWFLWEGESVLIFS-KNNQKIRNL 60
Query 67 TAHPQVSLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDA--PYWAKYREDAAKFGLT-EA 123
+P + L LD+ +G +I++ G A V++++ + D Y AKY + + G T E+
Sbjct 61 AQNPNIVLALDNTDDGGDVIILEGRARVLSSEEERSDTTLPAYKAKYGAEMQEIGFTPES 120
Query 124 IAA-YSTRLKITPTR 137
+ Y+ +++T R
Sbjct 121 MGKEYNQAIRVTIDR 135
>gi|284043799|ref|YP_003394139.1| PPOX class F420-dependent enzyme [Conexibacter woesei DSM 14684]
gi|283948020|gb|ADB50764.1| PPOX class putative F420-dependent enzyme [Conexibacter woesei
DSM 14684]
Length=143
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (54%), Gaps = 6/125 (4%)
Query 20 RLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNLDSD 79
RL + W+TTV GQP V F +DG + + S P + KV ++ +P+V+L+L+ D
Sbjct 16 RLRDEHEVWITTVRSDGQPQSSPVGFLWDGHSVLIVSQPGSRKVRNLRENPRVALHLEVD 75
Query 80 ----GNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLT-EAI-AAYSTRLKI 133
G GI+ + G A V + R+ A Y KY E+ LT EA+ A YS +++
Sbjct 76 RAGDGGDGGILTLEGVATVDPDPIGEREAAAYADKYEEEMRSAELTPEALFADYSAVIRV 135
Query 134 TPTRV 138
PTRV
Sbjct 136 RPTRV 140
>gi|325001121|ref|ZP_08122233.1| pyridoxamine 5'-phosphate oxidase-related protein FMN-binding
[Pseudonocardia sp. P1]
Length=154
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/99 (36%), Positives = 54/99 (55%), Gaps = 5/99 (5%)
Query 17 VSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNL 76
V+ARL ++ WLTTV +P VWF F ++ ++S P AKVA + P V L+L
Sbjct 16 VAARLAAEPVIWLTTVGDDARPHSVPVWFLFADPEILIFSRPDTAKVARLRDRPGVCLSL 75
Query 77 DSDGNGAGIIVVGGTA--AVVATDVDCRDDAPYWAKYRE 113
D+ +G +++ G A AV + + R+ + KYRE
Sbjct 76 DTAASGTDVVLAEGDAAPAVEPPEPELRE---FGEKYRE 111
>gi|2222701|emb|CAB09924.1| hypothetical protein MLCL383.22c [Mycobacterium leprae]
Length=131
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/37 (68%), Positives = 28/37 (76%), Gaps = 0/37 (0%)
Query 94 VVATDVDCRDDAPYWAKYREDAAKFGLTEAIAAYSTR 130
+V TDV+C D YW KYRED AKFGLTE +A YSTR
Sbjct 1 MVITDVECHKDESYWTKYREDIAKFGLTEVMAEYSTR 37
>gi|229819924|ref|YP_002881450.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Beutenbergia
cavernae DSM 12333]
gi|229565837|gb|ACQ79688.1| pyridoxamine 5'-phosphate oxidase-related protein FMN-binding
[Beutenbergia cavernae DSM 12333]
Length=159
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/124 (32%), Positives = 58/124 (47%), Gaps = 17/124 (13%)
Query 16 EVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLN 75
V ARL+ D WLTTV G +WF +D L +++ P K+AH+ + P V+L+
Sbjct 13 HVHARLSRDPVVWLTTVRDDGVGHAVPMWFVWDDPQLLLWASPGTRKLAHLDSRPDVALH 72
Query 76 LDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWA------KYREDAAKFGLTEAIAAYST 129
LD+ GGT AV+ V R+ A W KY + + G TE A++
Sbjct 73 LDT--------AAGGTDAVLLDGVVRREGAAAWEVPAFTTKYGD---ELGGTEGARAWAE 121
Query 130 RLKI 133
+
Sbjct 122 TFSV 125
>gi|257056794|ref|YP_003134626.1| Pyridoxamine 5'-phosphate oxidase [Saccharomonospora viridis
DSM 43017]
gi|256586666|gb|ACU97799.1| Pyridoxamine 5'-phosphate oxidase [Saccharomonospora viridis
DSM 43017]
Length=133
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/120 (32%), Positives = 53/120 (45%), Gaps = 8/120 (6%)
Query 19 ARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLN-LD 77
ARL ++ Y L T ++G V VW DGT+L V+S A KV I P+V L D
Sbjct 11 ARLDAEKYVSLVTFRKNGTGVATPVWIARDGTELLVFSERNAGKVKRIRHTPRVELTACD 70
Query 78 SDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLTEAIAAYSTRLKITPTR 137
G V G A ++ DDA + A ++GL + +RL+ P R
Sbjct 71 MLGKKTHGATVTGKARIL-------DDAGSEHARKVIARRYGLLGRVTMLLSRLRGGPQR 123
>gi|284032909|ref|YP_003382840.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Kribbella flavida DSM 17836]
gi|283812202|gb|ADB34041.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Kribbella flavida DSM 17836]
Length=161
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (32%), Positives = 59/106 (56%), Gaps = 16/106 (15%)
Query 40 PRLV--WFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNLDSDGNGAGIIVVGGTAAVVAT 97
PR+V F+FDG L ++++P+AAKV + +P+V++ +D++G ++++ GT T
Sbjct 36 PRVVPLGFHFDGERLQLFTVPKAAKVNALRKNPRVAITIDTEGFPPKVLLIRGT-----T 90
Query 98 DVDCRDDAP--YWAKYRE------DAAKFGLTEAIAAYSTRLKITP 135
++ D P Y A + DA K G+ EA+ R+ +TP
Sbjct 91 ELRLEDGVPADYLASGKLVPADEFDAWKAGV-EALYDQMVRITVTP 135
>gi|148656792|ref|YP_001276997.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Roseiflexus
sp. RS-1]
gi|148568902|gb|ABQ91047.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding [Roseiflexus
sp. RS-1]
Length=127
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/131 (30%), Positives = 57/131 (44%), Gaps = 8/131 (6%)
Query 13 LTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQV 72
+T + A L Y LTT ++GQPVP VWF +G + V + + KV I A+P+V
Sbjct 1 MTAALFAPLAGHQYMNLTTFRKNGQPVPTPVWFAQEGDRIYVVTQAASGKVKRIRANPRV 60
Query 73 SLNLDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFG-LTEAIAAYSTRL 131
L SD G + A + D + R A K+G + + AA
Sbjct 61 QLT-PSDARGKPL------GATIEAQARILDPSEGEVARRALAKKYGVMFQMFAALWKLQ 113
Query 132 KITPTRVWTTP 142
+ TP + TP
Sbjct 114 RTTPIFLEITP 124
>gi|134102206|ref|YP_001107867.1| pyridoxamine 5'-phosphate oxidase-related,FMN-binding protein
[Saccharopolyspora erythraea NRRL 2338]
gi|291007486|ref|ZP_06565459.1| pyridoxamine 5'-phosphate oxidase-related,FMN-binding protein
[Saccharopolyspora erythraea NRRL 2338]
gi|133914829|emb|CAM04942.1| pyridoxamine 5'-phosphate oxidase-related,FMN-binding protein
[Saccharopolyspora erythraea NRRL 2338]
Length=127
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (51%), Gaps = 1/75 (1%)
Query 16 EVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSL- 74
+V+ L Y LTT R+G+PVP VW DG L V+S ++ KV I P V L
Sbjct 3 KVTRILADSRYLLLTTFRRNGKPVPTPVWVVGDGGSLAVWSDAESGKVKRIRREPGVELA 62
Query 75 NLDSDGNGAGIIVVG 89
D+ GN G V G
Sbjct 63 PCDALGNPRGEPVRG 77
>gi|302525430|ref|ZP_07277772.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302434325|gb|EFL06141.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=127
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/120 (31%), Positives = 55/120 (46%), Gaps = 10/120 (8%)
Query 20 RLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLN-LDS 78
RL ++ Y LTT R G+ VP VW DG +L ++S A KV I + +V L D
Sbjct 6 RLGAEKYVVLTTFRRDGRAVPTPVWASRDGGELVLFSERTAGKVKRIRNNGEVRLQACDV 65
Query 79 DGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAK-FGLTEAIAAYSTRLKITPTR 137
G V GTA ++ DA + R A+ +G+ + + +RL+ P R
Sbjct 66 RGRRVHGAQVRGTARLL--------DAADTERIRGVIARDYGIVGRVTMFFSRLRGGPER 117
>gi|295838872|ref|ZP_06825805.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|197695423|gb|EDY42356.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length=135
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/86 (33%), Positives = 39/86 (46%), Gaps = 0/86 (0%)
Query 9 MSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITA 68
M+++L+ A L LY L T G P +VW+ DG D+ V S KV +
Sbjct 1 MAIKLSDFARALLARPLYAVLATTGPDGAPAASVVWYGLDGDDIVVSSQEGRVKVRNAAL 60
Query 69 HPQVSLNLDSDGNGAGIIVVGGTAAV 94
P VSL + + + V GTA V
Sbjct 61 RPPVSLCVYDPQDPQRYVEVRGTAQV 86
>gi|318060389|ref|ZP_07979112.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Streptomyces sp. SA3_actG]
gi|318077802|ref|ZP_07985134.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Streptomyces sp. SA3_actF]
Length=135
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/86 (33%), Positives = 39/86 (46%), Gaps = 0/86 (0%)
Query 9 MSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITA 68
M+++L+ A L LY L T G P +VW+ DG D+ V S KV +
Sbjct 1 MAIKLSDSARALLARPLYAVLATTDGDGAPATSVVWYGLDGDDIVVSSQEGRLKVRNAQR 60
Query 69 HPQVSLNLDSDGNGAGIIVVGGTAAV 94
P VSL + + + V GTA V
Sbjct 61 RPAVSLCVYDPEDPQRYVEVRGTALV 86
>gi|156742701|ref|YP_001432830.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Roseiflexus
castenholzii DSM 13941]
gi|156234029|gb|ABU58812.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding [Roseiflexus
castenholzii DSM 13941]
Length=125
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/72 (37%), Positives = 37/72 (52%), Gaps = 1/72 (1%)
Query 19 ARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNL-D 77
A L Y LTT ++GQPVP VWF +G + V ++ + K I A+P+V L D
Sbjct 6 APLAGHQYMNLTTFRKNGQPVPTPVWFAQEGDRIYVVTLATSGKAKRIRANPRVQLTPSD 65
Query 78 SDGNGAGIIVVG 89
+ G G + G
Sbjct 66 ARGKPLGETIEG 77
>gi|333027074|ref|ZP_08455138.1| hypothetical protein STTU_4577 [Streptomyces sp. Tu6071]
gi|332746926|gb|EGJ77367.1| hypothetical protein STTU_4577 [Streptomyces sp. Tu6071]
Length=135
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/86 (33%), Positives = 39/86 (46%), Gaps = 0/86 (0%)
Query 9 MSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITA 68
M+++L+ A L LY L T G P +VW+ DG D+ V S KV +
Sbjct 1 MAIKLSDSARALLARPLYAVLATTDGDGAPATSVVWYGLDGDDIVVSSQEGRLKVRNAQR 60
Query 69 HPQVSLNLDSDGNGAGIIVVGGTAAV 94
P VSL + + + V GTA V
Sbjct 61 RPAVSLCVYDPEDPQRYVEVRGTALV 86
>gi|331694186|ref|YP_004330425.1| putative F420-dependent enzyme [Pseudonocardia dioxanivorans
CB1190]
gi|326948875|gb|AEA22572.1| putative F420-dependent enzyme [Pseudonocardia dioxanivorans
CB1190]
Length=132
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/83 (32%), Positives = 39/83 (47%), Gaps = 0/83 (0%)
Query 16 EVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLN 75
E + L L G L T R G P +WF +DGT L + AK ++ A P+V+++
Sbjct 8 EFADLLERPLLGHLATARRDGAPQVNPMWFLWDGTHLLFTHTSRRAKFRNVAAEPRVAMS 67
Query 76 LDSDGNGAGIIVVGGTAAVVATD 98
+ N + + V GT V D
Sbjct 68 VVDPDNPSRYLEVRGTVERVDED 90
>gi|302519096|ref|ZP_07271438.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302427991|gb|EFK99806.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length=151
Score = 41.6 bits (96), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/87 (33%), Positives = 39/87 (45%), Gaps = 0/87 (0%)
Query 8 AMSVELTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHIT 67
A +++L+ A L LY L T G P +VW+ DG D+ V S KV +
Sbjct 16 ACAIKLSDSARALLARPLYAVLATTDGDGAPATSVVWYGLDGDDIVVSSQEGRLKVRNAQ 75
Query 68 AHPQVSLNLDSDGNGAGIIVVGGTAAV 94
P VSL + + + V GTA V
Sbjct 76 RRPAVSLCVYDPEDPQRYVEVRGTALV 102
>gi|336180020|ref|YP_004585395.1| putative F420-dependent protein [Frankia symbiont of Datisca
glomerata]
gi|334861000|gb|AEH11474.1| putative F420-dependent enzyme [Frankia symbiont of Datisca glomerata]
Length=132
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/80 (28%), Positives = 39/80 (49%), Gaps = 0/80 (0%)
Query 13 LTQEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQV 72
L ++ L+ +Y W+TT+ G P +VW DG ++ + AK H+ P+V
Sbjct 4 LNEDARNLLSRPVYAWVTTLRPDGSPHSTVVWVDVDGDEIIFNTAVGRAKERHLRKDPRV 63
Query 73 SLNLDSDGNGAGIIVVGGTA 92
S+ + + ++ V GTA
Sbjct 64 SIGVLDPEDAYHLVSVSGTA 83
>gi|296392996|ref|YP_003657880.1| F420-dependent protein [Segniliparus rotundus DSM 44985]
gi|296180143|gb|ADG97049.1| putative F420-dependent enzyme [Segniliparus rotundus DSM 44985]
Length=133
Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/77 (32%), Positives = 41/77 (54%), Gaps = 1/77 (1%)
Query 20 RLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLN-LDS 78
++ ++ Y LTT + G P P +W DG +L ++++ + KV I +P+V+L D
Sbjct 7 QIAAEKYVLLTTYRKDGTPKPLPIWAVRDGDELLIWTVADSWKVKRIRNNPRVTLRACDR 66
Query 79 DGNGAGIIVVGGTAAVV 95
G V GTAA++
Sbjct 67 TGKNPFGPTVEGTAAIL 83
>gi|108804025|ref|YP_643962.1| pyridoxamine 5'-phosphate oxidase-like protein [Rubrobacter xylanophilus
DSM 9941]
gi|108765268|gb|ABG04150.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
[Rubrobacter xylanophilus DSM 9941]
Length=141
Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/113 (29%), Positives = 53/113 (47%), Gaps = 4/113 (3%)
Query 29 LTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNLDSDGNGAGIIVV 88
L+TV G+P VWF DG + + K ++ +P+VSL +D + ++V
Sbjct 22 LSTVRPDGRPHVAPVWFLLDGEAVVFTTHESTVKARNMRRNPRVSLCVDDERPPYSFVLV 81
Query 89 GGTAAVVATDVDCRD-DAPYWAKY--REDAAKFGLTEAIAAYSTRLKITPTRV 138
GTA + A D + D +Y +E A ++G A A +++ P RV
Sbjct 82 EGTARLSAGDPELLDWTTRIGGRYMGQERAEEYGRRNA-APGELLVRVEPVRV 133
>gi|111018885|ref|YP_701857.1| hypothetical protein RHA1_ro01888 [Rhodococcus jostii RHA1]
gi|110818415|gb|ABG93699.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=137
Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 42/135 (32%), Positives = 55/135 (41%), Gaps = 15/135 (11%)
Query 21 LTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNLDSDG 80
L + + LTT RSG+PV VW DG L V + + KV + +P V + S
Sbjct 6 LGDESFVSLTTFRRSGEPVSTPVWIARDGDALVVTTPEDSGKVKRLRNNPSVEIRPCSRR 65
Query 81 NGA--GIIVVGGTAAVVATDVDCRDDA-----PYWAKYREDAAKFGLTEAIAAYSTR--- 130
G+ V A +VA + R A Y KYR L E I A +
Sbjct 66 GKVETGVDPVVAVAEIVADEFISRRMADTVRDEYGLKYR----IVMLVERILARRQKPRV 121
Query 131 -LKITPTRVWTTPTG 144
L+ITP TPT
Sbjct 122 LLRITPATERVTPTA 136
>gi|284031244|ref|YP_003381175.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Kribbella flavida DSM 17836]
gi|283810537|gb|ADB32376.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Kribbella flavida DSM 17836]
Length=152
Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/97 (31%), Positives = 45/97 (47%), Gaps = 3/97 (3%)
Query 16 EVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLN 75
E+ ARL + WL T+ G P VWF + G+ + S + KV ++ P+VSL
Sbjct 27 ELPARLAREQNVWLCTLRPDGSPHVTPVWFVYMGSTWWIGSAERNRKVRNVERDPRVSLA 86
Query 76 LDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYR 112
L+ +G +V G A V + A + KYR
Sbjct 87 LE---DGRNPVVAEGQARVHHSGFPADVVAAFARKYR 120
>gi|337764716|emb|CCB73425.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=152
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/133 (30%), Positives = 66/133 (50%), Gaps = 13/133 (9%)
Query 15 QEVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSL 74
+E+ A LT + TVA G P +WF + G L +YS+ ++ + AH+ A P++++
Sbjct 16 RELDAYLTGQRTCRVATVAADGTPHAGALWFGWTGGSLWLYSLVRSRRWAHLRADPRIAV 75
Query 75 NLDSDGNGAGI---IVVGGTAAVVA----TDVDCRDDAPYWAKYREDAAKFGLTEAIAAY 127
+D DG G + + GTA V T + C + A R+ AAK+ +A+
Sbjct 76 LVD-DGEEYGELRGVELTGTAVFVGEAPRTGLPCPE---LRAPERDFAAKYFGADAMPHD 131
Query 128 STR--LKITPTRV 138
L++TP R+
Sbjct 132 GRHAWLRLTPDRI 144
>gi|271968899|ref|YP_003343095.1| hypothetical protein Sros_7681 [Streptosporangium roseum DSM
43021]
gi|270512074|gb|ACZ90352.1| hypothetical protein Sros_7681 [Streptosporangium roseum DSM
43021]
Length=126
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/113 (30%), Positives = 50/113 (45%), Gaps = 9/113 (7%)
Query 21 LTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSL-NLDSD 79
L+++ Y LTT ++G VP VW DG L V++ ++ KV I +P V + D
Sbjct 7 LSAEQYVCLTTFRKNGTAVPTPVWAAADGDALVVWTQAESGKVKRIRGNPGVVVAACDMR 66
Query 80 GNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLTEAIAAYSTRLK 132
GN G V G + A + + R K+GLT +RL+
Sbjct 67 GNTRGEQVEGRARELSAGETE--------RVRRLIVKKYGLTARALILGSRLR 111
>gi|297204353|ref|ZP_06921750.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197716844|gb|EDY60878.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=126
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/115 (34%), Positives = 52/115 (46%), Gaps = 11/115 (9%)
Query 20 RLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLN-LDS 78
RL + Y LT+ ++G PV VW DG L V+S A KV I A V + D
Sbjct 8 RLGNGKYLLLTSFRKNGTPVATPVWVVRDGDALGVWSAADAWKVKRIRARADVLVGPCDV 67
Query 79 DGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYRE-DAAKFGLTEAIAAYSTRLK 132
GN G + AT C DA A+YR+ A K+G+ + +RL+
Sbjct 68 RGNPTG-------DQIPATAEIC--DAATTARYRQLLARKYGILGRLTLLGSRLR 113
>gi|295838137|ref|ZP_06825070.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295826882|gb|EFG65125.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length=132
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/94 (33%), Positives = 43/94 (46%), Gaps = 3/94 (3%)
Query 18 SARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNLD 77
+ARL + WL TV +G P VWF D + + +A KV I P+VSL L+
Sbjct 11 AARLAGERNVWLCTVRANGTPHVAPVWFVHDAGRWWIGTDERAVKVRSIRTTPRVSLALE 70
Query 78 SDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKY 111
+G +V GTA V+ R + KY
Sbjct 71 ---DGDRPLVAEGTARVLTAPFPPRVVTAFHEKY 101
>gi|284993281|ref|YP_003411836.1| pyridoxamine 5'-phosphate oxidase-like FMN- binding protein [Geodermatophilus
obscurus DSM 43160]
gi|284066527|gb|ADB77465.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Geodermatophilus obscurus DSM 43160]
Length=159
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/91 (32%), Positives = 46/91 (51%), Gaps = 7/91 (7%)
Query 9 MSVELTQEVSARLTSDLYGWLTTVARSGQPVPR---LVWFYFDGTDLTVYSMPQAAKVAH 65
MS E T++V+ L + +G+LTT G+ R L FDG DL ++ A + H
Sbjct 1 MSAEDTRKVAELLKGERFGFLTTTTPEGKLTSRPMALQEVEFDG-DLWFFAEQSAPWLGH 59
Query 66 ITAHPQVSLNLDSDGNGAGIIVVGGTAAVVA 96
I+ PQV++ G+G + + G A +V
Sbjct 60 ISHSPQVNVGA---GSGGSWVSLTGEAVIVG 87
>gi|240173346|ref|ZP_04752004.1| hypothetical protein MkanA1_28796 [Mycobacterium kansasii ATCC
12478]
Length=129
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/117 (30%), Positives = 51/117 (44%), Gaps = 10/117 (8%)
Query 19 ARLTSDLYGWLTTVARSGQPVPRLVWFYFD---GTDLTVYSMPQAAKVAHITAHPQVSLN 75
A L Y LTT + G+P P VW D G L V S +A KV I P+V+L
Sbjct 6 ADLAKARYILLTTFTKDGRPKPTPVWAALDKDHGDRLLVISEKKAWKVKRIRNTPRVTLA 65
Query 76 LDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGLTEAIAAYSTRLK 132
+ V GTAA++ DD+ A Y ++G+ + + ++L+
Sbjct 66 ICDVRGRPKSEAVEGTAAIL-------DDSQTGAVYDAIGKRYGIVGKVFNFVSKLR 115
>gi|291435416|ref|ZP_06574806.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
gi|291338311|gb|EFE65267.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC
14672]
Length=129
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/115 (34%), Positives = 52/115 (46%), Gaps = 11/115 (9%)
Query 20 RLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLN-LDS 78
RL + Y +T+ ++G PV VW DG L V++ + KV I A V + D
Sbjct 11 RLGAGKYLLVTSYRKNGTPVATPVWVVRDGDALGVWTAADSWKVKRIRARGDVLVGPCDV 70
Query 79 DGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYRE-DAAKFGLTEAIAAYSTRLK 132
GN G A V AT C D A+YRE A K+GL + +RL+
Sbjct 71 RGNPTG-------AQVPATAEIC--DPATTARYRELIARKYGLVGRLTLLGSRLR 116
>gi|296129958|ref|YP_003637208.1| putative F420-dependent enzyme [Cellulomonas flavigena DSM 20109]
gi|296021773|gb|ADG75009.1| putative F420-dependent enzyme [Cellulomonas flavigena DSM 20109]
Length=133
Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/67 (36%), Positives = 33/67 (50%), Gaps = 2/67 (2%)
Query 28 WLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLNLDSDGNGAGIIV 87
WLTT+ R G P +WF D + S KVA++ P+V+L + DG G +V
Sbjct 19 WLTTLRRDGSPHVTPIWFLLDEHTFWIASSTVNVKVANMLRDPRVALAV--DGTGGRPVV 76
Query 88 VGGTAAV 94
G A V
Sbjct 77 AQGRAHV 83
>gi|284031264|ref|YP_003381195.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Kribbella flavida DSM 17836]
gi|283810557|gb|ADB32396.1| pyridoxamine 5'-phosphate oxidase-related FMN- binding protein
[Kribbella flavida DSM 17836]
Length=148
Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/124 (27%), Positives = 56/124 (46%), Gaps = 13/124 (10%)
Query 16 EVSARLTSDLYGWLTTVARSGQPVPRLVWFYFDGTDLTVYSMPQAAKVAHITAHPQVSLN 75
+V ARLT+D+ W++T + G P + F + G L V + + ++ +PQV L
Sbjct 15 DVLARLTTDIDAWVSTASPDGTPCLVPLSFLWTGETLIVSTASRNPTSLNLQTNPQVHLA 74
Query 76 LDSDGNGAGIIVVGGTAAVVATDVDCRDDAPYWAKYREDAAKFGL-TEAIAAYSTRLKIT 134
+ G+ ++++ GTAA P + A K G ++ A IT
Sbjct 75 I---GHTRDVVLITGTAAPF---------TPTSTQAEAFATKTGFDPSSLKASYPYFGIT 122
Query 135 PTRV 138
PTR+
Sbjct 123 PTRI 126
Lambda K H
0.319 0.131 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128702269584
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40